Carg01355 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01355
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Short-chain dehydrogenase, putative
Location	Cucurbita_argyrosperma_scaffold_004 : 411212 .. 412257 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCTTGTGAAAGCAGCAACAACAATAATAATGGCTTCATTGTGTTATACAGTTTTTGATGTTCGGGTTGACGAGGATACCGTATGTGGAAAGCGCTTCGTGGGATTGGATCAATATCCATGTGCTAGTATCTATGAGTATTCTAAATGTGAGCAATTAATGTTTTGAGAAACAATTTATGATACTATTCTCGATTCTGACAAGCGCTATCCATTTTCTGTTACAGTATGCTTACTGCTGTTCTCCTATGAGCTTCACCGGAAACTTTCCCTAGAGAACGGATCTAATAAAGTAACAGTTGTGTAAGGGAACTTTGTCGTCGTTGCCTTTGGTTATCCTTGTTTCGTACTAAACTAGGCTTCAAGGCTTCTGATATGGATCTGCTGATTTTTGTTTGTTAAATATGATCTCTTTCATATTCTGAAGTGTTGCGGATCCTGGAGTAGTCAAAACAAACATCATGAGAGAAGTTCCTACATATCTTTCTAGGGTAGCATTTACAATATTGAGGCTTTTGAGGCTTCTACAGCTACCTGAAGATGGGGTCAACTCCATTTTGGATGCAGCCTTTGCATTACCTGTGAGAATTTTTTGCGCTTGTCTGTGTGTGTGTTTCATAGTTCTATTAAGATCTTCAATTGAGTAGACTGCACTTTCTTATGTCAGGACACATCTGGTGTTTACTTTTTCGGTGGAAACGGTAGGACGGTCAAGTCCTCTGCTCGGTCGTACGACACAAAACTTGCCAAGGAGCTTTGGGCGACGTCGTCTAATCTGTTCTTGAAATCCCAGATTGCTATTGAGGGAGTAACTAGTTATTGATTCTGACCATTGGAGTATGTCAGTTCAAATAGCTTCATGTTTAGCTCATTGTCAAAATTTATGAACTTGTAATGCAACCTACTACTCGAGGTCGAGGTCGAGGTCATTTTTTTAAGTTCGTTTAGGTGATGGAACTTAGTATTAAGATAGGTAATAAGTGTTTTATCTATTGAATTATGCTTATATTAGTGTAATCCATAATTAATTAATGTTTAATTTTG

mRNA sequence

ATGTGTCTTGTGAAAGCAGCAACAACAATAATAATGGCTTCATTGTGTTATACAGTTTTTGATGTTCGGGTTGACGAGGATACCGTATGTGGAAAGCGCTTCGTGGGATTGGATCAATATCCATGTGCTAGTATCTATGAGTATTCTAAATTATGCTTACTGCTGTTCTCCTATGAGCTTCACCGGAAACTTTCCCTAGAGAACGGATCTAATAAAGTAACAGTTGTTGTTGCGGATCCTGGAGTAGTCAAAACAAACATCATGAGAGAAGTTCCTACATATCTTTCTAGGGTAGCATTTACAATATTGAGGCTTTTGAGGCTTCTACAGCTACCTGAAGATGGGGTCAACTCCATTTTGGATGCAGCCTTTGCATTACCTGACACATCTGGTGTTTACTTTTTCGGTGGAAACGGTAGGACGGTCAAGTCCTCTGCTCGGTCGTACGACACAAAACTTGCCAAGGAGCTTTGGGCGACGTCGTCTAATCTGTTCTTGAAATCCCAGATTGCTATTGAGGGAGTAACTAGTTATTGATTCTGACCATTGGAGTATGTCAGTTCAAATAGCTTCATGTTTAGCTCATTGTCAAAATTTATGAACTTGTAATGCAACCTACTACTCGAGGTCGAGGTCGAGGTCATTTTTTTAAGTTCGTTTAGGTGATGGAACTTAGTATTAAGATAGGTAATAAGTGTTTTATCTATTGAATTATGCTTATATTAGTGTAATCCATAATTAATTAATGTTTAATTTTG

Coding sequence (CDS)

ATGTGTCTTGTGAAAGCAGCAACAACAATAATAATGGCTTCATTGTGTTATACAGTTTTTGATGTTCGGGTTGACGAGGATACCGTATGTGGAAAGCGCTTCGTGGGATTGGATCAATATCCATGTGCTAGTATCTATGAGTATTCTAAATTATGCTTACTGCTGTTCTCCTATGAGCTTCACCGGAAACTTTCCCTAGAGAACGGATCTAATAAAGTAACAGTTGTTGTTGCGGATCCTGGAGTAGTCAAAACAAACATCATGAGAGAAGTTCCTACATATCTTTCTAGGGTAGCATTTACAATATTGAGGCTTTTGAGGCTTCTACAGCTACCTGAAGATGGGGTCAACTCCATTTTGGATGCAGCCTTTGCATTACCTGACACATCTGGTGTTTACTTTTTCGGTGGAAACGGTAGGACGGTCAAGTCCTCTGCTCGGTCGTACGACACAAAACTTGCCAAGGAGCTTTGGGCGACGTCGTCTAATCTGTTCTTGAAATCCCAGATTGCTATTGAGGGAGTAACTAGTTATTGA

Protein sequence

MCLVKAATTIIMASLCYTVFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVADPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGNGRTVKSSARSYDTKLAKELWATSSNLFLKSQIAIEGVTSY

Homology

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BLAST of Carg01355 vs. NCBI nr
Match: XP_023551555.1 (dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.1 bits (806), Expect = 1.5e-82
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 19  VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 78
           VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA
Sbjct: 219 VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 278

Query: 79  DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN 138
           DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN
Sbjct: 279 DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN 338

Query: 139 GRTVKSSARSYDTKLAKELWATSSNLFLKSQIAIEGVTSY 179
           GRTVKSSA+SYDTKLAKELWATSSNLFLKSQIAIEGVTSY
Sbjct: 339 GRTVKSSAQSYDTKLAKELWATSSNLFLKSQIAIEGVTSY 378

[Close]

BLAST of Carg01355 vs. NCBI nr
Match: XP_022993465.1 (dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita maxima])

HSP 1 Score: 298.5 bits (763), Expect = 1.5e-77
Identity = 150/158 (94.94%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 19  VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 78
           VFDV+VDEDT+CGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA
Sbjct: 219 VFDVQVDEDTICGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 278

Query: 79  DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN 138
           DPGVVKTNIMREVPTYLSRVAFT+LRLLRLLQLPEDGVNSILDAAFALP+TSGVYFFGG+
Sbjct: 279 DPGVVKTNIMREVPTYLSRVAFTVLRLLRLLQLPEDGVNSILDAAFALPETSGVYFFGGD 338

Query: 139 GRTVKSSARSYDTKLAKELWATSSNLFLKSQIAIEGVT 177
           GRTVKSSA SYDTKLAKELWA SSNLFLKSQIAIEG T
Sbjct: 339 GRTVKSSAWSYDTKLAKELWAMSSNLFLKSQIAIEGGT 376

[Close]

BLAST of Carg01355 vs. NCBI nr
Match: XP_022939811.1 (dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita moschata])

HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 19  VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 78
           VFDV+VDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLEN SNKVTVVVA
Sbjct: 219 VFDVQVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENRSNKVTVVVA 278

Query: 79  DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN 138
           DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFAL +TSGVYFFGG+
Sbjct: 279 DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALSETSGVYFFGGD 338

Query: 139 GRTVKSSARSYDTKLAKELWATSSNLFLKSQIAIEGVTS 178
            RTVKSSARSYDTKLAKELWATS NLFLKSQIAIEG TS
Sbjct: 339 SRTVKSSARSYDTKLAKELWATSFNLFLKSQIAIEGGTS 377

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BLAST of Carg01355 vs. NCBI nr
Match: XP_008466147.1 (PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like isoform X1 [Cucumis melo] >XP_016898875.1 PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like isoform X1 [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 135/159 (84.91%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 19  VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 78
           VFDV+VDEDTVCGK F GLDQYPC+SIY+YSKLCLLLFSYELHRKLSLEN S+K+TV VA
Sbjct: 219 VFDVQVDEDTVCGKCFWGLDQYPCSSIYQYSKLCLLLFSYELHRKLSLENESHKLTVNVA 278

Query: 79  DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN 138
           DPGVVKTNIMREVPTYLSRVAFTIL LLRLLQLP+DGVNSILDAA A P+TSGVYFFGG 
Sbjct: 279 DPGVVKTNIMREVPTYLSRVAFTILMLLRLLQLPKDGVNSILDAALASPETSGVYFFGGK 338

Query: 139 GRTVKSSARSYDTKLAKELWATSSNLFLKSQIAIEGVTS 178
           GR V+SSA+SYD KLA+ELW TSSNLFLKSQI++EG TS
Sbjct: 339 GRRVRSSAQSYDAKLAEELWETSSNLFLKSQISVEGGTS 377

[Close]

BLAST of Carg01355 vs. NCBI nr
Match: XP_016898874.1 (PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like isoform X2 [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 135/159 (84.91%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 19  VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 78
           VFDV+VDEDTVCGK F GLDQYPC+SIY+YSKLCLLLFSYELHRKLSLEN S+K+TV VA
Sbjct: 184 VFDVQVDEDTVCGKCFWGLDQYPCSSIYQYSKLCLLLFSYELHRKLSLENESHKLTVNVA 243

Query: 79  DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN 138
           DPGVVKTNIMREVPTYLSRVAFTIL LLRLLQLP+DGVNSILDAA A P+TSGVYFFGG 
Sbjct: 244 DPGVVKTNIMREVPTYLSRVAFTILMLLRLLQLPKDGVNSILDAALASPETSGVYFFGGK 303

Query: 139 GRTVKSSARSYDTKLAKELWATSSNLFLKSQIAIEGVTS 178
           GR V+SSA+SYD KLA+ELW TSSNLFLKSQI++EG TS
Sbjct: 304 GRRVRSSAQSYDAKLAEELWETSSNLFLKSQISVEGGTS 342

[Close]

BLAST of Carg01355 vs. TAIR10
Match: AT5G15940.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 179.5 bits (454), Expect = 1.8e-45
Identity = 88/154 (57.14%), Postives = 115/154 (74.68%), Query Frame = 0


Query: 17  YTVFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVV 76
           ++ F  ++D+D+V G  F   +QYPCA IYEYSKLCLLLFSYELHR+L L + S+ V+V+
Sbjct: 206 HSAFIQKLDKDSVTGVCFSTSNQYPCARIYEYSKLCLLLFSYELHRQLRLIDDSSHVSVI 265

Query: 77  VADPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFG 136
            ADPG VKTNIMRE+P Y++ + F   ++L LLQ PEDG  SI+DAA + P+TSG Y+FG
Sbjct: 266 AADPGFVKTNIMRELPCYITSMVFLGFKILGLLQSPEDGAESIIDAALSTPETSGAYYFG 325

Query: 137 GNGRTVKSSARSYDTKLAKELWATSSNLFLKSQI 171
           G GRT++SS  S D KLAK+LW TS +LF   Q+
Sbjct: 326 GKGRTIESSQVSRDPKLAKQLWETSCDLFNDLQL 359

[Close]

BLAST of Carg01355 vs. TAIR10
Match: AT5G04070.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-41
Identity = 85/152 (55.92%), Postives = 107/152 (70.39%), Query Frame = 0


Query: 18  TVFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVV 77
           + F  R D D+V G  F    QYPCA IYEYSKLCLLLFSYELHR+L L + S+ ++VV 
Sbjct: 206 SAFTGRFDMDSVTGVNFSRSKQYPCARIYEYSKLCLLLFSYELHRQLHLMDDSHHISVVA 265

Query: 78  ADPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGG 137
            DPG VKTNIM E+P+Y+  +AF  L++L L+Q PED   S++DAA A P+ SG YFFG 
Sbjct: 266 VDPGAVKTNIMHELPSYIQVIAFCGLKILGLMQSPEDAAESVIDAALAPPEISGKYFFG- 325

Query: 138 NGRTVKSSARSYDTKLAKELWATSSNLFLKSQ 170
            GRT++SS  S D K+AKELW TS  +F + Q
Sbjct: 326 -GRTIESSTLSSDPKMAKELWDTSCLIFNELQ 355

[Close]

BLAST of Carg01355 vs. TAIR10
Match: AT5G53090.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 45.8 bits (107), Expect = 3.2e-05
Identity = 39/151 (25.83%), Postives = 70/151 (46.36%), Query Frame = 0


Query: 25  DEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVADPGVVK 84
           D + V GKR     ++     Y  SKL  ++FS  L ++L LE    +++VV   PG+V 
Sbjct: 210 DMNVVSGKR-----KFTSLVGYSGSKLAQVMFSNVLLKRLPLE---TRISVVCLSPGIVL 269

Query: 85  TNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAA-----------FALPDTSGVY 144
           TN+ R++P Y+ +V + ++     +  P++G  S L +A               D     
Sbjct: 270 TNVARDLPRYV-QVQYALIPY--FIFSPQEGSRSTLFSATDAQIPEHCEKLKTEDKPVCT 329

Query: 145 FFGGNGRTVKSSARSYDTKLAKELWATSSNL 165
           F   N +  K S  +++ + A+ +W  +  L
Sbjct: 330 FISQNCKHTKPSEEAHNVETAERVWEKTIKL 349

[Close]

BLAST of Carg01355 vs. TAIR10
Match: AT5G53100.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 45.1 bits (105), Expect = 5.4e-05
Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 25  DEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVADPGVVK 84
           D + V GKR     ++   S Y  SKL  ++F+  L +KL LE G   ++VV   PGVV+
Sbjct: 200 DMNFVSGKR-----KFSSLSAYSSSKLAQVMFNNVLLKKLPLETG---ISVVCLSPGVVQ 259

Query: 85  TNIMREVP 93
           TNI R++P
Sbjct: 260 TNITRDLP 259

[Close]

BLAST of Carg01355 vs. TAIR10
Match: AT4G27760.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 44.7 bits (104), Expect = 7.1e-05
Identity = 43/152 (28.29%), Postives = 68/152 (44.74%), Query Frame = 0


Query: 25  DEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVADPGVVK 84
           D + V G+R     +Y     Y  SKL  ++FS  L +KL LE G   V+VV   PGVV 
Sbjct: 211 DMNVVSGRR-----KYSSLIGYSSSKLAQIMFSSILFKKLPLETG---VSVVCLSPGVVL 270

Query: 85  TNIMREVPTYLSRVAFTILRLL-RLLQLPEDGVNSILDAA-----------FALPDTSGV 144
           TN+ R+    LSR+   +  ++   +  P++G  S L +A               D    
Sbjct: 271 TNVARD----LSRILQALYAVIPYFIFSPQEGCRSSLFSATDPQIPEYWETLKNDDWPVC 330

Query: 145 YFFGGNGRTVKSSARSYDTKLAKELWATSSNL 165
            F   + R    S  +++T+ A+ +W  +  L
Sbjct: 331 PFISQDCRPANPSEEAHNTETAQRVWKKTLEL 350

[Close]

BLAST of Carg01355 vs. Swiss-Prot
Match: sp|Q8N5I4|DHRSX_HUMAN (Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens OX=9606 GN=DHRSX PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 3.2e-07
Identity = 49/163 (30.06%), Postives = 84/163 (51.53%), Query Frame = 0


Query: 6   AATTIIMASLCYTVFDVRVD--EDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRK 65
           +A  + ++S  + V ++ +D  + + C         Y   + Y  SKL L+LF+Y L R 
Sbjct: 175 SARVVTVSSATHYVAELNMDDLQSSAC---------YSPHAAYAQSKLALVLFTYHLQRL 234

Query: 66  LSLENGSNKVTVVVADPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAA 125
           L+ E   + VT  V DPGVV T++ + V  + +R+A  +L  L L + P++G  + + AA
Sbjct: 235 LAAE--GSHVTANVVDPGVVNTDVYKHV-FWATRLAKKLLGWL-LFKTPDEGAWTSIYAA 294

Query: 126 FA--LPDTSGVYFFGGNGRTVKSSARSYDTKLAKELWATSSNL 165
               L    G Y +  N +  KS   +Y+ KL ++LW+ S  +
Sbjct: 295 VTPELEGVGGHYLY--NEKETKSLHVTYNQKLQQQLWSKSCEM 322

[Close]

BLAST of Carg01355 vs. Swiss-Prot
Match: sp|Q8NBN7|RDH13_HUMAN (Retinol dehydrogenase 13 OS=Homo sapiens OX=9606 GN=RDH13 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 42/130 (32.31%), Postives = 63/130 (48.46%), Query Frame = 0


Query: 39  QYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVADPGVVKTNIMREVPTYLSRV 98
           +Y   + Y  SKL ++LF+ EL R+L      + VTV    PGV +T + R    + S  
Sbjct: 193 KYNTKAAYCQSKLAIVLFTKELSRRLQ----GSGVTVNALHPGVARTELGRHTGIHGSTF 252

Query: 99  AFTILRLL--RLLQLPEDGV--NSILDAAFALPDTSGVYFFGGNGRTVKSSARSYDTKLA 158
           + T L  +   L++ PE     ++ L  A  L D SG YF G   +     A   D ++A
Sbjct: 253 SSTTLGPIFWLLVKSPELAAQPSTYLAVAEELADVSGKYFDGLKQKAPAPEAE--DEEVA 312

Query: 159 KELWATSSNL 165
           + LWA S+ L
Sbjct: 313 RRLWAESARL 316

[Close]

BLAST of Carg01355 vs. Swiss-Prot
Match: sp|Q8VBZ0|DHRSX_MOUSE (Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus OX=10090 GN=Dhrsx PE=1 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 4.4e-04
Identity = 44/135 (32.59%), Postives = 65/135 (48.15%), Query Frame = 0


Query: 36  GLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVADPGVVKTNIMREVPTYL 95
           G   Y   + Y  SKL L LF+ +L R   L+   + VT  +ADPGVV T + R    ++
Sbjct: 198 GRHAYSPYAAYAQSKLALALFALQLQR--ILDARGDPVTSNMADPGVVDTELYRHA-GWV 257

Query: 96  SRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGNGRTVKSSAR------SY 155
            R A   L  L + + PE+G  +++ AA A P+  GV      GR ++  A       + 
Sbjct: 258 LRTAKRFLGWL-VFKSPEEGAWTLVYAA-AAPELEGV-----GGRYLRDEAEAEPLGTAR 317

Query: 156 DTKLAKELWATSSNL 165
           D +L + LWA    L
Sbjct: 318 DQELQRRLWAEGLRL 322

[Close]

BLAST of Carg01355 vs. TrEMBL
Match: tr|A0A1S4DT43|A0A1S4DT43_CUCME (dehydrogenase/reductase SDR family member on chromosome X-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503643 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.1e-68
Identity = 135/159 (84.91%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 19  VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 78
           VFDV+VDEDTVCGK F GLDQYPC+SIY+YSKLCLLLFSYELHRKLSLEN S+K+TV VA
Sbjct: 219 VFDVQVDEDTVCGKCFWGLDQYPCSSIYQYSKLCLLLFSYELHRKLSLENESHKLTVNVA 278

Query: 79  DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN 138
           DPGVVKTNIMREVPTYLSRVAFTIL LLRLLQLP+DGVNSILDAA A P+TSGVYFFGG 
Sbjct: 279 DPGVVKTNIMREVPTYLSRVAFTILMLLRLLQLPKDGVNSILDAALASPETSGVYFFGGK 338

Query: 139 GRTVKSSARSYDTKLAKELWATSSNLFLKSQIAIEGVTS 178
           GR V+SSA+SYD KLA+ELW TSSNLFLKSQI++EG TS
Sbjct: 339 GRRVRSSAQSYDAKLAEELWETSSNLFLKSQISVEGGTS 377

[Close]

BLAST of Carg01355 vs. TrEMBL
Match: tr|A0A1S4DSB3|A0A1S4DSB3_CUCME (dehydrogenase/reductase SDR family member on chromosome X-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503643 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.1e-68
Identity = 135/159 (84.91%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 19  VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 78
           VFDV+VDEDTVCGK F GLDQYPC+SIY+YSKLCLLLFSYELHRKLSLEN S+K+TV VA
Sbjct: 184 VFDVQVDEDTVCGKCFWGLDQYPCSSIYQYSKLCLLLFSYELHRKLSLENESHKLTVNVA 243

Query: 79  DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN 138
           DPGVVKTNIMREVPTYLSRVAFTIL LLRLLQLP+DGVNSILDAA A P+TSGVYFFGG 
Sbjct: 244 DPGVVKTNIMREVPTYLSRVAFTILMLLRLLQLPKDGVNSILDAALASPETSGVYFFGGK 303

Query: 139 GRTVKSSARSYDTKLAKELWATSSNLFLKSQIAIEGVTS 178
           GR V+SSA+SYD KLA+ELW TSSNLFLKSQI++EG TS
Sbjct: 304 GRRVRSSAQSYDAKLAEELWETSSNLFLKSQISVEGGTS 342

[Close]

BLAST of Carg01355 vs. TrEMBL
Match: tr|A0A0A0KPZ3|A0A0A0KPZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G129320 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.8e-66
Identity = 132/159 (83.02%), Postives = 144/159 (90.57%), Query Frame = 0


Query: 19  VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 78
           VFDV VDEDTVCGK F GLDQYPC+SIY+YSKLCLLLFSYELHRKLSL+  S+K+TV VA
Sbjct: 109 VFDVHVDEDTVCGKGFWGLDQYPCSSIYQYSKLCLLLFSYELHRKLSLDKESHKLTVNVA 168

Query: 79  DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN 138
           DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLP+DGVNSILDAA A P+TSGVYFFGG 
Sbjct: 169 DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGK 228

Query: 139 GRTVKSSARSYDTKLAKELWATSSNLFLKSQIAIEGVTS 178
           GR V SSA+S D KLA+ELW TSSNLF+KSQI++EG TS
Sbjct: 229 GRRVGSSAQSNDAKLAEELWETSSNLFVKSQISVEGGTS 267

[Close]

BLAST of Carg01355 vs. TrEMBL
Match: tr|A0A067DN07|A0A067DN07_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g017580mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.3e-49
Identity = 101/159 (63.52%), Postives = 127/159 (79.87%), Query Frame = 0


Query: 19  VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 78
           VF+ +V+ +T+ GK F+    YPCA IYEYSKLCLL+FSYELHR L L+  S  V+V+ A
Sbjct: 109 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDK-SRHVSVIAA 168

Query: 79  DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN 138
           DPGVVKTNIMREVP++LS +AFT+L+LL LLQ PE G+NS+LDAA A P+TSGVYFFGG 
Sbjct: 169 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGK 228

Query: 139 GRTVKSSARSYDTKLAKELWATSSNLFLKSQIAIEGVTS 178
           GRTV SSA S+++KLA ELW TS NLF+ SQ+A   +++
Sbjct: 229 GRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN 266

[Close]

BLAST of Carg01355 vs. TrEMBL
Match: tr|A0A067DS35|A0A067DS35_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g017580mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.3e-49
Identity = 101/159 (63.52%), Postives = 127/159 (79.87%), Query Frame = 0


Query: 19  VFDVRVDEDTVCGKRFVGLDQYPCASIYEYSKLCLLLFSYELHRKLSLENGSNKVTVVVA 78
           VF+ +V+ +T+ GK F+    YPCA IYEYSKLCLL+FSYELHR L L+  S  V+V+ A
Sbjct: 40  VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDK-SRHVSVIAA 99

Query: 79  DPGVVKTNIMREVPTYLSRVAFTILRLLRLLQLPEDGVNSILDAAFALPDTSGVYFFGGN 138
           DPGVVKTNIMREVP++LS +AFT+L+LL LLQ PE G+NS+LDAA A P+TSGVYFFGG 
Sbjct: 100 DPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGK 159

Query: 139 GRTVKSSARSYDTKLAKELWATSSNLFLKSQIAIEGVTS 178
           GRTV SSA S+++KLA ELW TS NLF+ SQ+A   +++
Sbjct: 160 GRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN 197

The following BLAST results are available for this feature:

BLAST of Carg01355 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551555.1	1.5e-82	99.38	dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita pepo s...	[more]
XP_022993465.1	1.5e-77	94.94	dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita maxima...	[more]
XP_022939811.1	1.3e-76	94.97	dehydrogenase/reductase SDR family member on chromosome X-like [Cucurbita moscha...	[more]
XP_008466147.1	1.7e-68	84.91	PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like isofor...	[more]
XP_016898874.1	1.7e-68	84.91	PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like isofor...	[more]

BLAST of Carg01355 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G15940.1	1.8e-45	57.14	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G04070.1	2.7e-41	55.92	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G53090.1	3.2e-05	25.83	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G53100.1	5.4e-05	41.18	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G27760.1	7.1e-05	28.29	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Carg01355 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8N5I4\|DHRSX_HUMAN	3.2e-07	30.06	Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens OX=960...	[more]
sp\|Q8NBN7\|RDH13_HUMAN	1.5e-04	32.31	Retinol dehydrogenase 13 OS=Homo sapiens OX=9606 GN=RDH13 PE=1 SV=2	[more]
sp\|Q8VBZ0\|DHRSX_MOUSE	4.4e-04	32.59	Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculu...	[more]

BLAST of Carg01355 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DT43\|A0A1S4DT43_CUCME	1.1e-68	84.91	dehydrogenase/reductase SDR family member on chromosome X-like isoform X1 OS=Cuc...	[more]
tr\|A0A1S4DSB3\|A0A1S4DSB3_CUCME	1.1e-68	84.91	dehydrogenase/reductase SDR family member on chromosome X-like isoform X2 OS=Cuc...	[more]
tr\|A0A0A0KPZ3\|A0A0A0KPZ3_CUCSA	1.8e-66	83.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G129320 PE=4 SV=1	[more]
tr\|A0A067DN07\|A0A067DN07_CITSI	3.3e-49	63.52	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g017580mg PE=4 SV=1	[more]
tr\|A0A067DS35\|A0A067DS35_CITSI	3.3e-49	63.52	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g017580mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01355-RA	Carg01355-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 6..168 e-value: 4.2E-16 score: 60.9
None	No IPR available	PANTHER	PTHR24319:SF26	DEHYDROGENASES, SHORT CHAIN	coord: 37..168
None	No IPR available	PANTHER	PTHR24319	FAMILY NOT NAMED	coord: 37..168
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 40..142

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01355	Cla005868	Watermelon (97103) v1	carwmB0830
Carg01355	Csa5G129320	Cucumber (Chinese Long) v2	carcuB0842
Carg01355	ClCG01G007270	Watermelon (Charleston Gray)	carwcgB0800
Carg01355	CSPI05G02530	Wild cucumber (PI 183967)	carcpiB0862
Carg01355	Cucsa.374300	Cucumber (Gy14) v1	carcgyB0957
Carg01355	CmaCh15G008520	Cucurbita maxima (Rimu)	carcmaB1148
Carg01355	CmoCh15G008840	Cucurbita moschata (Rifu)	carcmoB1118
Carg01355	Lsi09G007750	Bottle gourd (USVL1VR-Ls)	carlsiB754
Carg01355	Cp4.1LG13g06140	Cucurbita pepo (Zucchini)	carcpeB1157
Carg01355	CsGy5G012590	Cucumber (Gy14) v2	carcgybB0817
Carg01355	CsaV3_5G018710	Cucumber (Chinese Long) v3	carcucB0866
Carg01355	Cla97C01G007670	Watermelon (97103) v2	carwmbB0858

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01355	Silver-seed gourd	carcarB469
Carg01355	Cucurbita maxima (Rimu)	carcmaB1150
Carg01355	Cucurbita moschata (Rifu)	carcmoB1121
Carg01355	Cucurbita pepo (Zucchini)	carcpeB1158
Carg01355	Melon (DHL92) v3.5.1	carmeB0821
Carg01355	Melon (DHL92) v3.6.1	carmedB0832
Carg01355	Wax gourd	carwgoB0963