Cla005574 (gene) Watermelon (97103) v1

NameCla005574
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCysteine proteinase inhibitor (AHRD V1 **** Q30KW6_ZEAMP); contains Interpro domain(s) IPR000010 Proteinase inhibitor I25, cystatin
LocationChr9 : 33811051 .. 33811398 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCGTACGTGGAGGTTGGTCCGGGACAAAACGAAGCCTTGCTCGAAGGTCCAAAAGATGTTGAACTTGGGCGGTGGGAACCGATCGAGCATATCGAAGATCCATACGTGCAAGAGATCGGAAGGTTTGCAGTAATGGAGCACAACAAGCAAACAGGGGCAAACCTAAAGTTCATCCATGTGATAAATGGTGAGAAACAAGTGGTGGCTGGAATAAATTATAGGCTGAGGATTGAAGCAAGGAATGAAATAAATTTGGTTTGGACTTATGAGGCTTTGGTGAATGATAGGCCATGGGAGAAGAAGTGGAAACTCATATATTTTGTACCTCTCCTCAAGAACTGA

mRNA sequence

ATGAGTTCGTACGTGGAGGTTGGTCCGGGACAAAACGAAGCCTTGCTCGAAGGTCCAAAAGATGTTGAACTTGGGCGGTGGGAACCGATCGAGCATATCGAAGATCCATACGTGCAAGAGATCGGAAGGTTTGCAGTAATGGAGCACAACAAGCAAACAGGGGCAAACCTAAAGTTCATCCATGTGATAAATGGTGAGAAACAAGTGGTGGCTGGAATAAATTATAGGCTGAGGATTGAAGCAAGGAATGAAATAAATTTGGTTTGGACTTATGAGGCTTTGGTGAATGATAGGCCATGGGAGAAGAAGTGGAAACTCATATATTTTGTACCTCTCCTCAAGAACTGA

Coding sequence (CDS)

ATGAGTTCGTACGTGGAGGTTGGTCCGGGACAAAACGAAGCCTTGCTCGAAGGTCCAAAAGATGTTGAACTTGGGCGGTGGGAACCGATCGAGCATATCGAAGATCCATACGTGCAAGAGATCGGAAGGTTTGCAGTAATGGAGCACAACAAGCAAACAGGGGCAAACCTAAAGTTCATCCATGTGATAAATGGTGAGAAACAAGTGGTGGCTGGAATAAATTATAGGCTGAGGATTGAAGCAAGGAATGAAATAAATTTGGTTTGGACTTATGAGGCTTTGGTGAATGATAGGCCATGGGAGAAGAAGTGGAAACTCATATATTTTGTACCTCTCCTCAAGAACTGA

Protein sequence

MSSYVEVGPGQNEALLEGPKDVELGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRLRIEARNEINLVWTYEALVNDRPWEKKWKLIYFVPLLKN
BLAST of Cla005574 vs. Swiss-Prot
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana GN=CYS5 PE=2 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-15
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 1

Query: 24  LGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRLRIEARN 83
           +G W PI ++ DP V EIG FAV E+NK++ + LKF  V++GE QVV+G NYRL++ A +
Sbjct: 28  VGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAAND 87

Query: 84  EINLVWTYEALVNDRPWEKKWKLIYFVP 112
              +   Y A+V D+PW K   L  F P
Sbjct: 88  GDGVSKNYLAIVWDKPWMKFRNLTSFEP 115

BLAST of Cla005574 vs. Swiss-Prot
Match: CYT1_ACTDE (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.6e-14
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 1

Query: 14  ALLEGPKDVELGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGI 73
           A++ G K V  G W PIE +    VQ++ +FAV EHNKQ    L++  V+ G  QVVAG 
Sbjct: 19  AVVGGRKLVAAGGWRPIESLNSAEVQDVAQFAVSEHNKQANDELQYQSVVRGYTQVVAGT 78

Query: 74  NYRLRIEARNEINLVWTYEALVNDRPW 101
           NYRL I A++   +V  YEA+V D+PW
Sbjct: 79  NYRLVIAAKDGA-VVGNYEAVVWDKPW 104

BLAST of Cla005574 vs. Swiss-Prot
Match: CYT7_ORYSJ (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica GN=Os03g0210100 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.3e-13
Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 1

Query: 14  ALLEGPKDVELGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGAN-LKFIHVINGEKQVVAG 73
           A++ G     +G WEP++ I DP+VQE+GR+AV E ++   A  L F  V +GEKQVVAG
Sbjct: 17  AIVAGATAATVGSWEPVD-INDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAG 76

Query: 74  INYRLRIEARNEINLVWTYEALVNDR-PWEKKWKLIYFVPL 113
           +NYRL +EA +       YEA+V ++ P     KL+ F P+
Sbjct: 77  VNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFEPI 116

BLAST of Cla005574 vs. Swiss-Prot
Match: CYT6_ORYSJ (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=Os03g0210200 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.6e-12
Identity = 37/85 (43.53%), Postives = 58/85 (68.24%), Query Frame = 1

Query: 27  WEPIEHIEDPYVQEIGRFAVMEHNKQTGAN-LKFIHVINGEKQVVAGINYRLRIEARN-E 86
           W PI++I+DP++QE+GR+A+ E+N+ + ++ L F  V  GE+QVV+G+NYRL IEA +  
Sbjct: 23  WSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASGG 82

Query: 87  INLVWTYEALVNDRPWEKKWKLIYF 110
            ++  +Y A+V ++ W    KLI F
Sbjct: 83  GDVTGSYGAVVFEQEWSNTRKLISF 107

BLAST of Cla005574 vs. Swiss-Prot
Match: CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica GN=Os03g0429000 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-11
Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 1

Query: 24  LGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRLRIEARN 83
           +G W PI  + DP++QE+G +AV  H   +   L+F  V +GE+QVV+G+NYRL + A +
Sbjct: 32  VGGWSPITDVGDPHIQELGGWAVERHASLSSDGLRFRRVTSGEQQVVSGMNYRLVVSASD 91

Query: 84  EINLVWTYEALVNDRPWEKKWKLIYFVP 112
                 +Y A+V ++ W    +L  F P
Sbjct: 92  PAGATASYVAVVYEQSWTNTRQLTSFKP 119

BLAST of Cla005574 vs. TrEMBL
Match: D7LFL2_ARALL (Cysteine proteinase inhibitor OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_902339 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.2e-15
Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 1

Query: 24  LGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRLRIEARN 83
           LG W PI  ++DP++ +IG FAV E+NKQ+ + LKF+ V+ GE Q+V+G+NYRL + + +
Sbjct: 24  LGSWSPISDVKDPHIVKIGEFAVSEYNKQSKSGLKFVTVVRGESQIVSGVNYRLVVVSND 83

Query: 84  EINLVWTYEALVNDRPWEKKWKLIYFVPLLKN 116
             +    YEA+V ++PW K   L  F P   N
Sbjct: 84  GTDPSKNYEAIVLEKPWLKSMNLTSFKPATIN 115

BLAST of Cla005574 vs. TrEMBL
Match: R0FZY9_9BRAS (Cysteine proteinase inhibitor OS=Capsella rubella GN=CARUB_v10024940mg PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-14
Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 1

Query: 24  LGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRLRIEARN 83
           +G W PI  ++DP++ EIG FAV E+NKQ+ + LK++ V++GE QVV+G+NYRL + A +
Sbjct: 25  IGSWTPISDVKDPHIVEIGEFAVSEYNKQSKSGLKYVKVVSGESQVVSGVNYRLLVAAND 84

Query: 84  EI-NLVWTYEALVNDRPWEKKWKLIYFVPLLKN 116
           E+      YEA+V ++ W K   L  F P   N
Sbjct: 85  EVGGPSKNYEAVVFEKHWLKSMNLTSFKPATIN 117

BLAST of Cla005574 vs. TrEMBL
Match: I3SSB0_MEDTR (Cysteine proteinase inhibitor OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.6e-14
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 1

Query: 20  KDVELGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRLRI 79
           KD  +G W PI++++DP V EI +FAV E+ KQ+G+ L F+ VI GE QVV+G NYRL +
Sbjct: 25  KDALVGGWTPIKNVKDPQVVEIAKFAVTEYGKQSGSKLSFVKVIKGETQVVSGTNYRLVL 84

Query: 80  EARNEINLVWTYEALVNDRPWEKKWKLIYFVPL 113
            A+  ++    YEALV ++PW     L  F P+
Sbjct: 85  AAK-VVSATKNYEALVWEKPWLHLKNLTSFKPV 116

BLAST of Cla005574 vs. TrEMBL
Match: G7IM41_MEDTR (Cysteine proteinase inhibitor OS=Medicago truncatula GN=MTR_2g026040 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.6e-14
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 1

Query: 20  KDVELGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRLRI 79
           KD  +G W PI++++DP V EI +FAV E+ KQ+G+ L F+ VI GE QVV+G NYRL +
Sbjct: 25  KDALVGGWTPIKNVKDPQVVEIAKFAVTEYGKQSGSKLSFVKVIKGETQVVSGTNYRLVL 84

Query: 80  EARNEINLVWTYEALVNDRPWEKKWKLIYFVPL 113
            A+  ++    YEALV ++PW     L  F P+
Sbjct: 85  AAK-VVSATKNYEALVWEKPWLHLKNLTSFKPV 116

BLAST of Cla005574 vs. TrEMBL
Match: V4N3N5_EUTSA (Cysteine proteinase inhibitor OS=Eutrema salsugineum GN=EUTSA_v10001076mg PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.0e-14
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 1

Query: 16  LEGPKDVELGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINY 75
           L       +G W PI  ++DP+V E+G FAV E+NKQ+ + LKF+ V+ GE QVV+G+NY
Sbjct: 19  LHASSAARVGGWSPISDVKDPHVVEVGEFAVSEYNKQSKSGLKFVEVVRGESQVVSGMNY 78

Query: 76  RLRIEARNEINLVWT-----YEALVNDRPWEKKWKLIYFVP 112
           RL +   +   +  +     YEA+V ++PW K   L  F P
Sbjct: 79  RLVVAVNDGKGIAGSDASENYEAVVWEKPWLKSMNLTSFKP 119

BLAST of Cla005574 vs. NCBI nr
Match: gi|297826717|ref|XP_002881241.1| (hypothetical protein ARALYDRAFT_902339 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 89.4 bits (220), Expect = 4.6e-15
Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 1

Query: 24  LGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRLRIEARN 83
           LG W PI  ++DP++ +IG FAV E+NKQ+ + LKF+ V+ GE Q+V+G+NYRL + + +
Sbjct: 24  LGSWSPISDVKDPHIVKIGEFAVSEYNKQSKSGLKFVTVVRGESQIVSGVNYRLVVVSND 83

Query: 84  EINLVWTYEALVNDRPWEKKWKLIYFVPLLKN 116
             +    YEA+V ++PW K   L  F P   N
Sbjct: 84  GTDPSKNYEAIVLEKPWLKSMNLTSFKPATIN 115

BLAST of Cla005574 vs. NCBI nr
Match: gi|720001956|ref|XP_010256520.1| (PREDICTED: cysteine proteinase inhibitor 1-like [Nelumbo nucifera])

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-14
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 1

Query: 20  KDVELGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRLRI 79
           K   LG W+PI+ +EDP+VQE+ RF + +HNK+   NLKF  V+ GE QVVAG  YRL I
Sbjct: 31  KPPALGGWQPIKDVEDPHVQELARFVITQHNKEANTNLKFQKVVRGETQVVAGTKYRL-I 90

Query: 80  EARNEINLVWTYEALVNDRPWE 102
            A N+ +    YEA+V ++PWE
Sbjct: 91  VAANDGHATNNYEAVVWEKPWE 111

BLAST of Cla005574 vs. NCBI nr
Match: gi|743888071|ref|XP_010910533.1| (PREDICTED: cysteine proteinase inhibitor 1-like [Elaeis guineensis])

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-14
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 1

Query: 24  LGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRLRIEARN 83
           LG W+PI+++ D +VQEI +FAV EHNK   + L F  V+ GE QVV+GINYRL +EA+N
Sbjct: 30  LGGWQPIKNVNDAHVQEIAKFAVSEHNKLANSRLAFSKVVKGETQVVSGINYRLVVEAKN 89

Query: 84  EINLVWTYEALVNDRPWEKKWKLIYFVPL 113
               +  YEA+V ++ WE   KL  F P+
Sbjct: 90  G-GAMAKYEAIVWEKAWEGFRKLTSFQPV 117

BLAST of Cla005574 vs. NCBI nr
Match: gi|565476347|ref|XP_006295814.1| (hypothetical protein CARUB_v10024940mg [Capsella rubella])

HSP 1 Score: 87.0 bits (214), Expect = 2.3e-14
Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 1

Query: 24  LGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRLRIEARN 83
           +G W PI  ++DP++ EIG FAV E+NKQ+ + LK++ V++GE QVV+G+NYRL + A +
Sbjct: 25  IGSWTPISDVKDPHIVEIGEFAVSEYNKQSKSGLKYVKVVSGESQVVSGVNYRLLVAAND 84

Query: 84  EI-NLVWTYEALVNDRPWEKKWKLIYFVPLLKN 116
           E+      YEA+V ++ W K   L  F P   N
Sbjct: 85  EVGGPSKNYEAVVFEKHWLKSMNLTSFKPATIN 117

BLAST of Cla005574 vs. NCBI nr
Match: gi|697150476|ref|XP_009629445.1| (PREDICTED: cysteine proteinase inhibitor 1 {ECO:0000303|PubMed:14697268}-like [Nicotiana tomentosiformis])

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-14
Identity = 49/98 (50.00%), Postives = 61/98 (62.24%), Query Frame = 1

Query: 18  GPKDVELGRWEPIEHIEDPYVQEIGRFAVMEHNKQTGANLKFIHVINGEKQVVAGINYRL 77
           G ++V  G W PI++I DP V EIG+FAV EHNK+    L+F  ++NGE QVVAGINYRL
Sbjct: 30  GRREVLAGGWRPIKNITDPEVVEIGKFAVNEHNKEAKTKLEFEKIMNGESQVVAGINYRL 89

Query: 78  RIEARNEINLVWTYEALVNDRPWEKKWKLIYFVPLLKN 116
            I A++       Y A V D+PWEK   L  F  L  N
Sbjct: 90  VIAAKDG-GEPHQYMAEVWDKPWEKYRNLTSFKDLRCN 126

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CYT5_ARATH1.6e-1546.59Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana GN=CYS5 PE=2 SV=2[more]
CYT1_ACTDE6.6e-1447.13Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa PE=1 SV=1[more]
CYT7_ORYSJ4.3e-1343.56Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica GN=Os03... [more]
CYT6_ORYSJ3.6e-1243.53Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=Os03g0210200 ... [more]
CYT8_ORYSJ1.8e-1137.50Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica GN=Os03g0429000 ... [more]
Match NameE-valueIdentityDescription
D7LFL2_ARALL3.2e-1543.48Cysteine proteinase inhibitor OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_... [more]
R0FZY9_9BRAS1.6e-1444.09Cysteine proteinase inhibitor OS=Capsella rubella GN=CARUB_v10024940mg PE=3 SV=1[more]
I3SSB0_MEDTR4.6e-1446.24Cysteine proteinase inhibitor OS=Medicago truncatula PE=2 SV=1[more]
G7IM41_MEDTR4.6e-1446.24Cysteine proteinase inhibitor OS=Medicago truncatula GN=MTR_2g026040 PE=3 SV=1[more]
V4N3N5_EUTSA6.0e-1440.59Cysteine proteinase inhibitor OS=Eutrema salsugineum GN=EUTSA_v10001076mg PE=3 S... [more]
Match NameE-valueIdentityDescription
gi|297826717|ref|XP_002881241.1|4.6e-1543.48hypothetical protein ARALYDRAFT_902339 [Arabidopsis lyrata subsp. lyrata][more]
gi|720001956|ref|XP_010256520.1|1.0e-1451.22PREDICTED: cysteine proteinase inhibitor 1-like [Nelumbo nucifera][more]
gi|743888071|ref|XP_010910533.1|1.7e-1449.44PREDICTED: cysteine proteinase inhibitor 1-like [Elaeis guineensis][more]
gi|565476347|ref|XP_006295814.1|2.3e-1444.09hypothetical protein CARUB_v10024940mg [Capsella rubella][more]
gi|697150476|ref|XP_009629445.1|3.0e-1450.00PREDICTED: cysteine proteinase inhibitor 1 {ECO:0000303|PubMed:14697268}-like [N... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000010Cystatin_dom
IPR018073Prot_inh_cystat_CS
IPR020381Proteinase inhibitor I25, cystatin, conserved region
IPR027214Cystatin
Vocabulary: Molecular Function
TermDefinition
GO:0004869cysteine-type endopeptidase inhibitor activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010951 negative regulation of endopeptidase activity
cellular_component GO:0005575 cellular_component
cellular_component GO:0031410 cytoplasmic vesicle
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005574Cla005574.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000010Cystatin domainSMARTSM00043CY_4coord: 22..112
score: 2.9
IPR018073Proteinase inhibitor I25, cystatin, conserved sitePROSITEPS00287CYSTATINcoord: 67..80
scor
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPRODOMPD001231coord: 38..111
score: 8.0
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPFAMPF16845SQAPIcoord: 30..110
score: 9.8
IPR027214CystatinPANTHERPTHR11413CYSTATIN FAMILY MEMBERcoord: 14..112
score: 2.8
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 24..110
score: 6.7
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 25..112
score: 1.17

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None