Cla005312 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAAATAATTTTTTTCTTTATGTGGGTGTTGGAAACAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA ATGTTAAATAATTTTTTTCTTTATGTGGGTGTTGGAAACAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA ATGTTAAATAATTTTTTTCTTTATGTGGGTGTTGGAAACAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA MLNNFFLYVGVGNSFLGAFRYHQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
BLAST of Cla005312 vs. Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=3 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 9.3e-47 Identity = 91/113 (80.53%), Postives = 99/113 (87.61%), Query Frame = 1
BLAST of Cla005312 vs. Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=1 SV=2) HSP 1 Score: 185.3 bits (469), Expect = 4.6e-46 Identity = 91/113 (80.53%), Postives = 98/113 (86.73%), Query Frame = 1
BLAST of Cla005312 vs. Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 6.0e-46 Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = 1
BLAST of Cla005312 vs. Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 7.9e-46 Identity = 89/115 (77.39%), Postives = 100/115 (86.96%), Query Frame = 1
BLAST of Cla005312 vs. Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 7.9e-46 Identity = 89/115 (77.39%), Postives = 100/115 (86.96%), Query Frame = 1
BLAST of Cla005312 vs. TrEMBL
Match: A0A0A0L7M8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077610 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 4.0e-57 Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Cla005312 vs. TrEMBL
Match: A0A0A0K771_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G209580 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 4.9e-55 Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 1
BLAST of Cla005312 vs. TrEMBL
Match: K7LA44_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G316700 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 3.5e-53 Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 1
BLAST of Cla005312 vs. TrEMBL
Match: A0A0B2NVN3_GLYSO (Protein translation factor SUI1 like 2 OS=Glycine soja GN=glysoja_006404 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 3.5e-53 Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 1
BLAST of Cla005312 vs. TrEMBL
Match: F2VQM9_CATRO (Putative eukaryotic translation initiation factor SUI1 OS=Catharanthus roseus PE=2 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 2.3e-52 Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 1
BLAST of Cla005312 vs. NCBI nr
Match: gi|659126887|ref|XP_008463414.1| (PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo]) HSP 1 Score: 228.8 bits (582), Expect = 5.8e-57 Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Cla005312 vs. NCBI nr
Match: gi|449444048|ref|XP_004139787.1| (PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus]) HSP 1 Score: 221.9 bits (564), Expect = 7.1e-55 Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 1
BLAST of Cla005312 vs. NCBI nr
Match: gi|571473966|ref|XP_006586085.1| (PREDICTED: protein translation factor SUI1 homolog 2 [Glycine max]) HSP 1 Score: 215.7 bits (548), Expect = 5.1e-53 Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 1
BLAST of Cla005312 vs. NCBI nr
Match: gi|301602405|gb|ADK79108.1| (putative eukaryotic translation initiation factor SUI1 [Catharanthus roseus]) HSP 1 Score: 213.0 bits (541), Expect = 3.3e-52 Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 1
BLAST of Cla005312 vs. NCBI nr
Match: gi|1009111199|ref|XP_015899773.1| (PREDICTED: protein translation factor SUI1 homolog [Ziziphus jujuba]) HSP 1 Score: 211.1 bits (536), Expect = 1.3e-51 Identity = 99/112 (88.39%), Postives = 109/112 (97.32%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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