Cla005181 (gene) Watermelon (97103) v1

Overview
NameCla005181
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionGATA transcription factor 20 (AHRD V1 *-** B6SS40_MAIZE); contains Interpro domain(s) IPR000679 Zinc finger, GATA-type
LocationChr3 : 28313644 .. 28314719 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTGATGGATTTGAGGCAAAAGGTCAGAATCACCAGCCCCAAAAGCCCCTTTTAGTCCAATCTTTGTTATTTTTACTGATTTTCTTAATTCCACTCCTCTGTTTCAGGGACTGTTGCTTCCGGACACTAAATATTGTGTTGATTGTAAGACAACCAAGACTCCTTTATGGCGTGTAGGCCCTACTGGACCTAAGGTTCTTTCCATCCTTTGGCCTTTCTTTCTCTTTTCGTTTTTGCTTCTGTTTGCCTTGATTTCCTAGGTTGTTTCTGTTTGCCTTGATTTCCTTGATTTCCTAATGTTCTGTTTTTGTTTGATCTTGAGCTTATGAGTTTTGATTCTTGATCTATTTATGGTTTATAATTTTGCCTCGTAATTGGGTTTCTCATCTATTCATGAACCTGATCATCGTCTGTTTCTTCTACTGTTATCATGTGTTCTGTTTTGGCACTATGTCACTCGAATTTGGGTTTCTCCTCTTTTATCTTAGATGATGAGCTTTCCCTTTCATTTACTTTCCTCTCGAATTGATTTTATGATCTTGAGTCTGATTTGGATTCACATTTGTTTTTTTTTTTTTTGTGTTCTGTTTTTAGTGGGGTTCTCCTCTGTTTTATCAATCCAACCGTCCATTTCGTGTTGGAACTCGAAATTCTTATATGGTCAATTAAACAAACCTTTCTTCCTATTTGGGATTTTTGCAGTCACTGTGCAATGCATGCGGGATCAGGTTTAGAAAGAGAAGAATATCCACCACAGGAACGAACAAAGGATATGACAGGAAGAGAGGAGTTCATAACAATGGCTCCACGGCCATGACCACCGTGTCAGCCGCCACTTCCTCGGCCACCACCACGACCTCTGGCAGTGGTGGTGGAGATGGGGATGAGAATTTAGGGGAATGTGAGTCATTGAGGATGACACTGATGATGGCATTGGAGGAGGAGGAGGTGAAGAATTTACCGTCAGCAGTGAAGAAACAGCGGTGTCAGCGGCCGAAGAAGCTCGGGGAGGAGGAGAAGCAGGCAGCAGTGTCGTTAATGGAGTTGTCCTGTGGCTCTGTGTTTTCCTGA

mRNA sequence

ATGGGTTTGATGGATTTGAGGCAAAAGGGACTGTTGCTTCCGGACACTAAATATTGTGTTGATTGTAAGACAACCAAGACTCCTTTATGGCGTGTAGGCCCTACTGGACCTAAGTCACTGTGCAATGCATGCGGGATCAGGTTTAGAAAGAGAAGAATATCCACCACAGGAACGAACAAAGGATATGACAGGAAGAGAGGAGTTCATAACAATGGCTCCACGGCCATGACCACCGTGTCAGCCGCCACTTCCTCGGCCACCACCACGACCTCTGGCAGTGGTGGTGGAGATGGGGATGAGAATTTAGGGGAATGTGAGTCATTGAGGATGACACTGATGATGGCATTGGAGGAGGAGGAGGTGAAGAATTTACCGTCAGCAGTGAAGAAACAGCGGTGTCAGCGGCCGAAGAAGCTCGGGGAGGAGGAGAAGCAGGCAGCAGTGTCGTTAATGGAGTTGTCCTGTGGCTCTGTGTTTTCCTGA

Coding sequence (CDS)

ATGGGTTTGATGGATTTGAGGCAAAAGGGACTGTTGCTTCCGGACACTAAATATTGTGTTGATTGTAAGACAACCAAGACTCCTTTATGGCGTGTAGGCCCTACTGGACCTAAGTCACTGTGCAATGCATGCGGGATCAGGTTTAGAAAGAGAAGAATATCCACCACAGGAACGAACAAAGGATATGACAGGAAGAGAGGAGTTCATAACAATGGCTCCACGGCCATGACCACCGTGTCAGCCGCCACTTCCTCGGCCACCACCACGACCTCTGGCAGTGGTGGTGGAGATGGGGATGAGAATTTAGGGGAATGTGAGTCATTGAGGATGACACTGATGATGGCATTGGAGGAGGAGGAGGTGAAGAATTTACCGTCAGCAGTGAAGAAACAGCGGTGTCAGCGGCCGAAGAAGCTCGGGGAGGAGGAGAAGCAGGCAGCAGTGTCGTTAATGGAGTTGTCCTGTGGCTCTGTGTTTTCCTGA

Protein sequence

MGLMDLRQKGLLLPDTKYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRISTTGTNKGYDRKRGVHNNGSTAMTTVSAATSSATTTTSGSGGGDGDENLGECESLRMTLMMALEEEEVKNLPSAVKKQRCQRPKKLGEEEKQAAVSLMELSCGSVFS
Homology
[Close]
BLAST of Cla005181 vs. Swiss-Prot
Match: GAT16_ARATH (GATA transcription factor 16 OS=Arabidopsis thaliana GN=GATA16 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.5e-16
Identity = 63/145 (43.45%), Postives = 75/145 (51.72%), Query Frame = 1 

Query: 17  KYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRISTTGTNKGYDRKRGVHNNGSTAM 76
           K C DC T+KTPLWR GP GPKSLCNACGIR RK+R   T  NK   +            
Sbjct: 36  KTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRGGTEDNKKLKK------------ 95

Query: 77  TTVSAATSSATTTTSGSGGGDGDENLGECESLRMTLM-MALEEEEVKNLPSAVKKQRCQR 136
                         S SGGG+     GE  SL+ +LM + + +       S V+KQR   
Sbjct: 96  --------------SSSGGGN--RKFGE--SLKQSLMDLGIRKR------STVEKQR--- 139

Query: 137 PKKLGEEEKQAAVSLMELSCGSVFS 161
            +KLG EE+QAAV LM LS GSV++
Sbjct: 156 -QKLG-EEEQAAVLLMALSYGSVYA 139

[Close]
BLAST of Cla005181 vs. Swiss-Prot
Match: GAT17_ARATH (GATA transcription factor 17 OS=Arabidopsis thaliana GN=GATA17 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.5e-16
Identity = 61/158 (38.61%), Postives = 83/158 (52.53%), Query Frame = 1 

Query: 15  DTKY-CVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRISTTGTNKGYDRKRGVHNNGS 74
           DTK  CVDC T +TPLWR GP GPKSLCNACGI+ RK+R +  G  +  ++K+   +N +
Sbjct: 39  DTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGM-RSEEKKKNRKSNCN 98

Query: 75  TAMTTVSAATSSATTTTSGSGGGDGDENLGECESLRMT-----------LMMALEEEEVK 134
             +                 G  D D++   C + R +           L +  +   +K
Sbjct: 99  NDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSSSSSNKGVSKFLDLGFKVPVMK 158

Query: 135 NLPSAVKKQRCQRPKKLGEEEKQAAVSLMELSCGSVFS 161
              SAV+K+R  R  KLGEEE+ AAV LM LSC SV++
Sbjct: 159 R--SAVEKKRLWR--KLGEEER-AAVLLMALSCSSVYA 190

[Close]
BLAST of Cla005181 vs. Swiss-Prot
Match: GAT15_ARATH (GATA transcription factor 15 OS=Arabidopsis thaliana GN=GATA15 PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 1 

Query: 15 DTKYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRISTTGTNKGYDRKRGVHN 71
          + K C  C T+KTPLWR GP GPKSLCNACGIR RK+R  T  +N+  D+K+  HN
Sbjct: 39 EKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKR-RTLISNRSEDKKKKSHN 93

[Close]
BLAST of Cla005181 vs. Swiss-Prot
Match: GAT23_ARATH (GATA transcription factor 23 OS=Arabidopsis thaliana GN=GATA23 PE=2 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-11
Identity = 29/36 (80.56%), Postives = 30/36 (83.33%), Query Frame = 1 

Query: 19 CVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRIS 55
          C +CKTTKTP+WR GPTGPKSLCNACGIR RK+R S
Sbjct: 28 CSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRS 63

[Close]
BLAST of Cla005181 vs. Swiss-Prot
Match: GAT22_ARATH (Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-10
Identity = 29/42 (69.05%), Postives = 29/42 (69.05%), Query Frame = 1 

Query: 17  KYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRISTTGT 59
           + C DC TTKTPLWR GP GPKSLCNACGIR RK R +   T
Sbjct: 199 RICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAT 240

[Close]
BLAST of Cla005181 vs. TrEMBL
Match: A0A0A0M1G9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569090 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.2e-48
Identity = 106/164 (64.63%), Postives = 126/164 (76.83%), Query Frame = 1 

Query: 1   MGLMDLRQKGLLLPDTKYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRISTTGTNK 60
           MG MDL QKGLLL DTK CVDCKTTKTPLWR GPTGPKSLCNACGIRFRKRRIST GTN+
Sbjct: 1   MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR 60

Query: 61  GYDRKRGVHNNGSTAMTTVSAATSSAT----TTTSGSGGGDGDENLGECESLRMTLMMAL 120
              ++  V++N S+A+ TVSA T+S++    TTT+ S G DGDEN GEC SLRM LMM+L
Sbjct: 61  RDKKREKVNDNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSL 120

Query: 121 EEEEVKNLPSAVKKQRCQRPKKLGEEEKQAAVSLMELSCGSVFS 161
           EE+ +      VKKQ+ Q  +K+GEEEKQAA+SL+ LS  S+ S
Sbjct: 121 EEDVM-----VVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS 159

[Close]
BLAST of Cla005181 vs. TrEMBL
Match: A0A061F4J3_THECC (GATA transcription factor 15, putative OS=Theobroma cacao GN=TCM_026732 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-32
Identity = 85/172 (49.42%), Postives = 107/172 (62.21%), Query Frame = 1 

Query: 1   MGLMDLRQKGLLLP-------DTKYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRI 60
           MG+MDLR+K  L         + K+C DCKTTKTPLWR GP GPKSLCNACGIR+RK+R 
Sbjct: 1   MGVMDLREKKSLSEVVMMSENNKKFCTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRR 60

Query: 61  STTGTNKGYDRKRGVHNNGSTAMTTVSAATSSATTTTSGSGGGDGDENLGECESLRMTLM 120
           +  G NKG ++K+    +  ++ TT + +++S  TT  G     G  N G  ES++M L 
Sbjct: 61  AMLGLNKGPEKKKERSQSSHSSSTTTTTSSASVATTNVGDKKPSGQLN-GLSESVKMRLY 120

Query: 121 MALEEEEVKN------LPSAVKKQRCQRPKKLGEEEKQAAVSLMELSCGSVF 160
               E  ++       L   VKKQRCQR +KLGEEE QAA SLM LSCGSVF
Sbjct: 121 ALGSEVFLQRSSSSSLLSGVVKKQRCQRRRKLGEEE-QAAFSLMALSCGSVF 170

[Close]
BLAST of Cla005181 vs. TrEMBL
Match: B9N4N6_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0005s02040g PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-30
Identity = 82/145 (56.55%), Postives = 99/145 (68.28%), Query Frame = 1 

Query: 17  KYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRISTTGTNKGYDRKR-GVHNNGSTA 76
           K C DCKTTKTPLWR GP GPKSLCNACGIR+RK+R S     KG ++KR     + +T 
Sbjct: 24  KACTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKR-SVMRLEKGPEKKREKTTTSNTTT 83

Query: 77  MTTVSAATSSATTTTSGSGGGDGDENLGECESLRMTLMMALEEEEVKNLPSAVKKQRCQR 136
            T +S  T++ TT T+    G+G  +    ESLRM+LM+ L EE +   PS VKKQRCQR
Sbjct: 84  ATDISTITTATTTNTAQVVSGNGLIS----ESLRMSLMV-LGEEMMLQRPSVVKKQRCQR 143

Query: 137 PKKLGEEEKQAAVSLMELSCGSVFS 161
            +KL EEE QAA SLM LSCGSVF+
Sbjct: 144 KRKLREEE-QAAFSLMALSCGSVFA 161

[Close]
BLAST of Cla005181 vs. TrEMBL
Match: A0A0D2U0E8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G127900 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-30
Identity = 83/170 (48.82%), Postives = 106/170 (62.35%), Query Frame = 1 

Query: 1   MGLMDLRQKGLLLPDT------KYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRIS 60
           MG+MDLR K     D       K+C DCKTTKTPLWR GP GPKSLCNACGIR+RK+R +
Sbjct: 1   MGVMDLRAKKSWSEDMMSESNKKFCTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRRA 60

Query: 61  TTGTNKGYDRKRGVHNNGSTAMTTVSAATSSATTTTSGSGGGDGDENL-GECESLRMTLM 120
             G NKG ++K+           + S+ +SS++  T+  GG +   NL G  ES++M L 
Sbjct: 61  MLGLNKGIEKKK------KEISHSPSSDSSSSSAPTNDGGGENLSANLNGLSESVKMRLF 120

Query: 121 MALEE---EEVKNLPSAVKKQRCQRPKKLGEEEKQAAVSLMELSCGSVFS 161
               E   +   +L   VKKQRCQR +KLGEEE QAA+SLM LSC +VF+
Sbjct: 121 ALGSEVLLQTSSSLSGVVKKQRCQRRRKLGEEE-QAAISLMALSCDTVFA 163

[Close]
BLAST of Cla005181 vs. TrEMBL
Match: A0A0D2VEK1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G127900 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-28
Identity = 75/148 (50.68%), Postives = 97/148 (65.54%), Query Frame = 1 

Query: 17  KYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRISTTGTNKGYDRKRGVHNNGSTAM 76
           K+C DCKTTKTPLWR GP GPKSLCNACGIR+RK+R +  G NKG ++K+          
Sbjct: 8   KFCTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRRAMLGLNKGIEKKK------KEIS 67

Query: 77  TTVSAATSSATTTTSGSGGGDGDENL-GECESLRMTLMMALEE---EEVKNLPSAVKKQR 136
            + S+ +SS++  T+  GG +   NL G  ES++M L     E   +   +L   VKKQR
Sbjct: 68  HSPSSDSSSSSAPTNDGGGENLSANLNGLSESVKMRLFALGSEVLLQTSSSLSGVVKKQR 127

Query: 137 CQRPKKLGEEEKQAAVSLMELSCGSVFS 161
           CQR +KLGEEE QAA+SLM LSC +VF+
Sbjct: 128 CQRRRKLGEEE-QAAISLMALSCDTVFA 148

[Close]
BLAST of Cla005181 vs. NCBI nr
Match: gi|778662321|ref|XP_011659732.1| (PREDICTED: GATA transcription factor 16-like [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 7.5e-48
Identity = 106/164 (64.63%), Postives = 126/164 (76.83%), Query Frame = 1 

Query: 1   MGLMDLRQKGLLLPDTKYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRISTTGTNK 60
           MG MDL QKGLLL DTK CVDCKTTKTPLWR GPTGPKSLCNACGIRFRKRRIST GTN+
Sbjct: 1   MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR 60

Query: 61  GYDRKRGVHNNGSTAMTTVSAATSSAT----TTTSGSGGGDGDENLGECESLRMTLMMAL 120
              ++  V++N S+A+ TVSA T+S++    TTT+ S G DGDEN GEC SLRM LMM+L
Sbjct: 61  RDKKREKVNDNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMMSL 120

Query: 121 EEEEVKNLPSAVKKQRCQRPKKLGEEEKQAAVSLMELSCGSVFS 161
           EE+ +      VKKQ+ Q  +K+GEEEKQAA+SL+ LS  S+ S
Sbjct: 121 EEDVM-----VVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS 159

[Close]
BLAST of Cla005181 vs. NCBI nr
Match: gi|659099413|ref|XP_008450587.1| (PREDICTED: GATA transcription factor 16-like isoform X2 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 1.3e-44
Identity = 105/165 (63.64%), Postives = 122/165 (73.94%), Query Frame = 1 

Query: 1   MGLMDLRQKGLLLPDTKYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRISTTGTNK 60
           MG +DL QKGLLL DTK CVDCKTTKTPLWR GPTGPKSLCNACGIRFRKR+I T  TN+
Sbjct: 21  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIFTRRTNR 80

Query: 61  -GYDRKR-GVHNNGSTAMTTVSAATSSA---TTTTSGSGGGDGDENLGECESLRMTLMMA 120
            G D+KR  V +N S+ +  VSA T+S+   TTTT+ + G DGDEN GEC S RM +MM 
Sbjct: 81  GGRDKKRERVRDNHSSTVAIVSATTTSSSGTTTTTTTTSGVDGDENSGECGSSRMKIMMG 140

Query: 121 LEEEEVKNLPSAVKKQRCQRPKKLGEEEKQAAVSLMELSCGSVFS 161
           LEE+ +      VKK R Q  +K+GEEEKQAAVSLM LS GS+ S
Sbjct: 141 LEEDVM-----VVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS 180

[Close]
BLAST of Cla005181 vs. NCBI nr
Match: gi|659099411|ref|XP_008450586.1| (PREDICTED: GATA transcription factor 16-like isoform X1 [Cucumis melo])

HSP 1 Score: 176.4 bits (446), Expect = 4.0e-41
Identity = 105/184 (57.07%), Postives = 122/184 (66.30%), Query Frame = 1 

Query: 1   MGLMDLRQKGLLLPDTKYCVDCKTTKTPLWRVGPTGPK-------------------SLC 60
           MG +DL QKGLLL DTK CVDCKTTKTPLWR GPTGPK                   SLC
Sbjct: 21  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKEIFISSIKQTSLPIWGFLQSLC 80

Query: 61  NACGIRFRKRRISTTGTNK-GYDRKR-GVHNNGSTAMTTVSAATSSA---TTTTSGSGGG 120
           NACGIRFRKR+I T  TN+ G D+KR  V +N S+ +  VSA T+S+   TTTT+ + G 
Sbjct: 81  NACGIRFRKRKIFTRRTNRGGRDKKRERVRDNHSSTVAIVSATTTSSSGTTTTTTTTSGV 140

Query: 121 DGDENLGECESLRMTLMMALEEEEVKNLPSAVKKQRCQRPKKLGEEEKQAAVSLMELSCG 161
           DGDEN GEC S RM +MM LEE+ +      VKK R Q  +K+GEEEKQAAVSLM LS G
Sbjct: 141 DGDENSGECGSSRMKIMMGLEEDVM-----VVKKHRWQWQRKVGEEEKQAAVSLMALSNG 199

[Close]
BLAST of Cla005181 vs. NCBI nr
Match: gi|590644487|ref|XP_007031095.1| (GATA transcription factor 15, putative [Theobroma cacao])

HSP 1 Score: 147.1 bits (370), Expect = 2.6e-32
Identity = 85/172 (49.42%), Postives = 107/172 (62.21%), Query Frame = 1 

Query: 1   MGLMDLRQKGLLLP-------DTKYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRI 60
           MG+MDLR+K  L         + K+C DCKTTKTPLWR GP GPKSLCNACGIR+RK+R 
Sbjct: 1   MGVMDLREKKSLSEVVMMSENNKKFCTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRR 60

Query: 61  STTGTNKGYDRKRGVHNNGSTAMTTVSAATSSATTTTSGSGGGDGDENLGECESLRMTLM 120
           +  G NKG ++K+    +  ++ TT + +++S  TT  G     G  N G  ES++M L 
Sbjct: 61  AMLGLNKGPEKKKERSQSSHSSSTTTTTSSASVATTNVGDKKPSGQLN-GLSESVKMRLY 120

Query: 121 MALEEEEVKN------LPSAVKKQRCQRPKKLGEEEKQAAVSLMELSCGSVF 160
               E  ++       L   VKKQRCQR +KLGEEE QAA SLM LSCGSVF
Sbjct: 121 ALGSEVFLQRSSSSSLLSGVVKKQRCQRRRKLGEEE-QAAFSLMALSCGSVF 170

[Close]
BLAST of Cla005181 vs. NCBI nr
Match: gi|566168897|ref|XP_006382425.1| (zinc finger family protein [Populus trichocarpa])

HSP 1 Score: 140.2 bits (352), Expect = 3.2e-30
Identity = 82/145 (56.55%), Postives = 99/145 (68.28%), Query Frame = 1 

Query: 17  KYCVDCKTTKTPLWRVGPTGPKSLCNACGIRFRKRRISTTGTNKGYDRKR-GVHNNGSTA 76
           K C DCKTTKTPLWR GP GPKSLCNACGIR+RK+R S     KG ++KR     + +T 
Sbjct: 24  KACTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKR-SVMRLEKGPEKKREKTTTSNTTT 83

Query: 77  MTTVSAATSSATTTTSGSGGGDGDENLGECESLRMTLMMALEEEEVKNLPSAVKKQRCQR 136
            T +S  T++ TT T+    G+G  +    ESLRM+LM+ L EE +   PS VKKQRCQR
Sbjct: 84  ATDISTITTATTTNTAQVVSGNGLIS----ESLRMSLMV-LGEEMMLQRPSVVKKQRCQR 143

Query: 137 PKKLGEEEKQAAVSLMELSCGSVFS 161
            +KL EEE QAA SLM LSCGSVF+
Sbjct: 144 KRKLREEE-QAAFSLMALSCGSVFA 161

The following BLAST results are available for this feature:
BLAST of Cla005181 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GAT16_ARATH7.5e-1643.45GATA transcription factor 16 OS=Arabidopsis thaliana GN=GATA16 PE=2 SV=1[more]
GAT17_ARATH7.5e-1638.61GATA transcription factor 17 OS=Arabidopsis thaliana GN=GATA17 PE=2 SV=1[more]
GAT15_ARATH1.5e-1158.93GATA transcription factor 15 OS=Arabidopsis thaliana GN=GATA15 PE=2 SV=2[more]
GAT23_ARATH4.3e-1180.56GATA transcription factor 23 OS=Arabidopsis thaliana GN=GATA23 PE=2 SV=2[more]
GAT22_ARATH2.1e-1069.05Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=... [more]
BLAST of Cla005181 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M1G9_CUCSA5.2e-4864.63Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569090 PE=4 SV=1[more]
A0A061F4J3_THECC1.8e-3249.42GATA transcription factor 15, putative OS=Theobroma cacao GN=TCM_026732 PE=4 SV=... [more]
B9N4N6_POPTR2.2e-3056.55Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0005s02040g PE=4 SV=1[more]
A0A0D2U0E8_GOSRA2.2e-3048.82Uncharacterized protein OS=Gossypium raimondii GN=B456_013G127900 PE=4 SV=1[more]
A0A0D2VEK1_GOSRA1.2e-2850.68Uncharacterized protein OS=Gossypium raimondii GN=B456_013G127900 PE=4 SV=1[more]
BLAST of Cla005181 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778662321|ref|XP_011659732.1|7.5e-4864.63PREDICTED: GATA transcription factor 16-like [Cucumis sativus][more]
gi|659099413|ref|XP_008450587.1|1.3e-4463.64PREDICTED: GATA transcription factor 16-like isoform X2 [Cucumis melo][more]
gi|659099411|ref|XP_008450586.1|4.0e-4157.07PREDICTED: GATA transcription factor 16-like isoform X1 [Cucumis melo][more]
gi|590644487|ref|XP_007031095.1|2.6e-3249.42GATA transcription factor 15, putative [Theobroma cacao][more]
gi|566168897|ref|XP_006382425.1|3.2e-3056.55zinc finger family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000679Znf_GATA
IPR013088Znf_NHR/GATA
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0008270zinc ion binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU12611watermelon EST collection version 2.0transcribed_cluster
WMU46679watermelon EST collection version 2.0transcribed_cluster
WMU77710watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005181Cla005181.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU46679WMU46679transcribed_cluster
WMU77710WMU77710transcribed_cluster
WMU12611WMU12611transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 19..52
score: 1.3
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 13..75
score: 8.0
IPR000679Zinc finger, GATA-typePROFILEPS50114GATA_ZN_FINGER_2coord: 19..49
score: 12
IPR013088Zinc finger, NHR/GATA-typeGENE3DG3DSA:3.30.50.10coord: 18..52
score: 5.7
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 15..53
score: 6.3
NoneNo IPR availablePANTHERPTHR10071:SF208SUBFAMILY NOT NAMEDcoord: 15..53
score: 6.3
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 16..53
score: 9.03