Cla005180 (gene) Watermelon (97103) v1

NameCla005180
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRetrotransposon protein (AHRD V1 *-*- E5GBB2_CUCME)
LocationChr3 : 28318307 .. 28320247 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTTTGGGGTTGGTTTGGATTATAAAACCAACCCCAAATACAATCAACCCAATCCTTCCCAGTTTCCGCCGCTTCCCAATGCACACTTTGCTCGATGTCTGCTCTCCCTCTCTCTCTTCTGTCGCCTTTTGTTGCCTTCTGTCCGCATTCACTCTTCCTATGCGTTGGTCGAAGCAGGCCATGTGTTGGTCGAAGCAGGTCATGCGTTGGTCGAAGTAGGCCATGCGTCGGTCGAAGCAGGTCATGCGTTGGTCGAAGCAGGCCATGCGTTGGTCGAAGTAGGCCTTGCATTGGTCGAAGGCTTGCATTGTTATTATTATATTGTTATAATTTGGTTGTTGGCTTATTAAACTTCGGTCGCTTCCATTTAAATCTTGCACTGTCACTCAAATTAATTTGAGTGGTTGGGTTGTTTAACTTCATTGATTCACATGCTTATATATACGAATTCTCTCCTATTTGTATATCACACACCATTTTGGAGAAGAAATTTTCTCTCCAAGTTCTTCTTTTCCAGTGAGTTCCCTTCAATCTTTTGCTATTTTTTATTTCTTTCTCCTTATGTTATGAATTATTTTTATTCAAACTTTCTTCTGTTTCATGTGATGGTGGACTTCTTGTTTGATATGTGCTCTATCCATTTGCCTCTTTAACCCGATTGACAGTCGAGTTCTAACGGTTACGTATGCATGCTCAGTTTTTTAATTGAATTTTTTTTCCTAGTCATGATGTTTACTTAGCTAACATGACTTTTTTTTTTTTTTGTCAGTGAGCAATCCTCCGAGGAAAATCATACTACCCGGTTGATGTGCAGTGCAAGACCATACATGCATGTTGTCTCCTGCACAATTTAATAATTCGAGAAATGAGACCAAATTCCTTACTCGACGAAGGAGAGGGAAGTCAGGGGGGACCAATACCAACAGACAATGAGAATATCGAATTTGTGGAGACATTTGATGCATTCACTGCATGGAGGGATAATATCGCAAATCAGATGTGGGCTGAATGGAATGCAAACTAAAGACGCCCTTGGGAAATTCTATATATTACCTTTTTTTTTTTTTTTGGAGAAGATAGGAATTGAATTTTTTTTTTTGTGTGTATAAAGTATTTTGTTGGTGCCCAACGTGTACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGGTCCAGTGTGTGCAGTCTGGACACTGGCGAGCTGATAACGGGACTTTCCCGACCTGGATTCCTATCAAACATACTATGGATGATGGAGCAGAGGATACCAGGGTGTTCCATACAGGTCAGCCCACATCTGGAGTCAAGGGTCAGGACCCTGAAAAGACAGTACAGCGCGATCGCTAAAATGTTAGGCCCAGGCTATCACACCTTACTTTTAGGAAACTGATGCGTTGAAGGGTCTATGAAGAAAAGAAGTAAGATATTTGACGCATGGGTCAAGGTAATTTAATTACATGTTTTATTTATTTCTTCTTCGTTTAAATTTGTATAGGCCCTAACATAACACAAGTCACCTTTAACAGAGTCATCCGAGTGCAAAAGAATTGCGCCATATTCCATACTATGATGAATTGGCCATCGTATTCGGCAAAGACAGAGCCACAGGGAGTTATGCAACCACCACTGCAGAGGTCGGATCTGAACCTGTTATGGAAGAGGAGAAGGAGTACATCCTGAACAACCAGTCCCCAGACTTTGAGAACTTCTATATTCCTGATTCACCTTTTGCTAGCTCGCCCCTGTCAGAGGACTTTTCGACTACCCAGCGGTAG

mRNA sequence

ATGGGCTTTGGGGTTGGTTTGGATTATAAAACCAACCCCAAATACAATCAACCCAATCCTTCCCAGTTTCCGCCGCTTCCCAATGCACACTTTGCTCGATGTCTGCTCTCCCTCTCTCTCTTCTGTCGCCTTTTGTTGCCTTCTGTCCGCATTCACTCTTCCTATGCGTTGGTCGAAGCAGGCCATGTGTTGGTCGAAGCAGGTCATGCGTTGGTCGAAGTAGGCCATGCGTCGGTCGAAGCAGGTCATGCGTTGGTCGAAGCAGGCCATGCGTTGGTCGAAAGTCATCCGAGTGCAAAAGAATTGCGCCATATTCCATACTATGATGAATTGGCCATCGTATTCGGCAAAGACAGAGCCACAGGGAGTTATGCAACCACCACTGCAGAGGTCGGATCTGAACCTGTTATGGAAGAGGAGAAGGAGTACATCCTGAACAACCAGTCCCCAGACTTTGAGAACTTCTATATTCCTGATTCACCTTTTGCTAGCTCGCCCCTGTCAGAGGACTTTTCGACTACCCAGCGGTAG

Coding sequence (CDS)

ATGGGCTTTGGGGTTGGTTTGGATTATAAAACCAACCCCAAATACAATCAACCCAATCCTTCCCAGTTTCCGCCGCTTCCCAATGCACACTTTGCTCGATGTCTGCTCTCCCTCTCTCTCTTCTGTCGCCTTTTGTTGCCTTCTGTCCGCATTCACTCTTCCTATGCGTTGGTCGAAGCAGGCCATGTGTTGGTCGAAGCAGGTCATGCGTTGGTCGAAGTAGGCCATGCGTCGGTCGAAGCAGGTCATGCGTTGGTCGAAGCAGGCCATGCGTTGGTCGAAAGTCATCCGAGTGCAAAAGAATTGCGCCATATTCCATACTATGATGAATTGGCCATCGTATTCGGCAAAGACAGAGCCACAGGGAGTTATGCAACCACCACTGCAGAGGTCGGATCTGAACCTGTTATGGAAGAGGAGAAGGAGTACATCCTGAACAACCAGTCCCCAGACTTTGAGAACTTCTATATTCCTGATTCACCTTTTGCTAGCTCGCCCCTGTCAGAGGACTTTTCGACTACCCAGCGGTAG

Protein sequence

MGFGVGLDYKTNPKYNQPNPSQFPPLPNAHFARCLLSLSLFCRLLLPSVRIHSSYALVEAGHVLVEAGHALVEVGHASVEAGHALVEAGHALVESHPSAKELRHIPYYDELAIVFGKDRATGSYATTTAEVGSEPVMEEEKEYILNNQSPDFENFYIPDSPFASSPLSEDFSTTQR
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005180Cla005180.1mRNA