Cla004914 (gene) Watermelon (97103) v1

Overview
NameCla004914
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAcidic endochitinase (AHRD V1 **-- Q8LP06_ARAKO); contains Interpro domain(s) IPR013781 Glycoside hydrolase, subgroup, catalytic core
LocationChr1 : 418357 .. 418782 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAACAACATATCAATCCCCACAATGTTCCTAACTTTCTTCTTGATTACTACCTTGTCCCAATCTTCTCAAGTGTCAGATTAGAGAGTATTGGAGACAACAAAAAGGAGAAGACAGCATCAAAGATGCATGTAACGCAAAGCATAAATTACAGTACCATCAACATTGCTTTTCTGTCGAAGTTCGGAAGTCGTCTAAAGCCAAAGCTCGACATTCTTTCACATTGCAATCCAAACAATGGCAGGTGCAAAGATCTCGATAACGAGATTAAAGGCTGCCAACACAAAGCGGGTGCCATCGATCAACAGTTAATTGGCGACAACTGCGGCAACAACTACTACAACCCTTCCTCTGCCGATGCAAAACAAGTAGCTGCCTTCTTCGACGGTGTTTCCAAGTCACGACCGTTGGAGATGTTTTAG

mRNA sequence

ATGGCAAAACAACATATCAATCCCCACAATGTTCCTAACTTTCTTCTTGATTACTACCTTGTCCCAATCTTCTCAAGTGTCAGATTAGAGAGTATTGGAGACAACAAAAAGGAGAAGACAGCATCAAAGATGCATGTAACGCAAAGCATAAATTACAGTACCATCAACATTGCTTTTCTGTCGAAGTTCGGAAGTCGTCTAAAGCCAAAGCTCGACATTCTTTCACATTGCAATCCAAACAATGGCAGGTGCAAAGATCTCGATAACGAGATTAAAGGCTGCCAACACAAAGCGGGTGCCATCGATCAACAGTTAATTGGCGACAACTGCGGCAACAACTACTACAACCCTTCCTCTGCCGATGCAAAACAAGTAGCTGCCTTCTTCGACGGTGTTTCCAAGTCACGACCGTTGGAGATGTTTTAG

Coding sequence (CDS)

ATGGCAAAACAACATATCAATCCCCACAATGTTCCTAACTTTCTTCTTGATTACTACCTTGTCCCAATCTTCTCAAGTGTCAGATTAGAGAGTATTGGAGACAACAAAAAGGAGAAGACAGCATCAAAGATGCATGTAACGCAAAGCATAAATTACAGTACCATCAACATTGCTTTTCTGTCGAAGTTCGGAAGTCGTCTAAAGCCAAAGCTCGACATTCTTTCACATTGCAATCCAAACAATGGCAGGTGCAAAGATCTCGATAACGAGATTAAAGGCTGCCAACACAAAGCGGGTGCCATCGATCAACAGTTAATTGGCGACAACTGCGGCAACAACTACTACAACCCTTCCTCTGCCGATGCAAAACAAGTAGCTGCCTTCTTCGACGGTGTTTCCAAGTCACGACCGTTGGAGATGTTTTAG

Protein sequence

MAKQHINPHNVPNFLLDYYLVPIFSSVRLESIGDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIKGCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVAAFFDGVSKSRPLEMF
Homology
[Close]
BLAST of Cla004914 vs. Swiss-Prot
Match: CHIA_CUCSA (Acidic endochitinase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10
Identity = 52/141 (36.88%), Postives = 68/141 (48.23%), Query Frame = 1 

Query: 9   HNVPNFLLDYYLVP-IFSSVRLESI----GDNKKEKTASKMHVTQSINYSTINIAFLSKF 68
           H +   L  ++L+  IF S     I    G N  E + +    T   NY  +NIAFLS F
Sbjct: 4   HKITTTLSIFFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATG--NYEFVNIAFLSSF 63

Query: 69  GSRLKPKLDILSHCNPNNGRCKDLDNEIKGCQHKAGAIDQQLIGDNCGNNYYNPSSA-DA 128
           GS   P L++  HCNP+N  C  L +EI  C+ +   +   L+    G   Y+ SSA DA
Sbjct: 64  GSGQAPVLNLAGHCNPDNNGCAFLSDEINSCKSQNVKV---LLSIGGGAGSYSLSSADDA 123

Query: 129 KQVA-----AFFDGVSKSRPL 139
           KQVA     ++  G S SRPL
Sbjct: 124 KQVANFIWNSYLGGQSDSRPL 139

[Close]
BLAST of Cla004914 vs. Swiss-Prot
Match: CHLY_HEVBR (Hevamine-A OS=Hevea brasiliensis PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 7.1e-10
Identity = 44/111 (39.64%), Postives = 57/111 (51.35%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIK 92
           G N  E T ++   T+   YS +NIAFL+KFG+   P++++  HCNP  G C  + N I+
Sbjct: 34  GQNGNEGTLTQTCSTRK--YSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIR 93

Query: 93  GCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVA-----AFFDGVSKSRPL 139
            CQ + G      +G   G +Y   S ADAK VA      F  G S SRPL
Sbjct: 94  SCQIQ-GIKVMLSLGGGIG-SYTLASQADAKNVADYLWNNFLGGKSSSRPL 140

[Close]
BLAST of Cla004914 vs. Swiss-Prot
Match: CHIA_TOBAC (Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.3e-10
Identity = 39/111 (35.14%), Postives = 56/111 (50.45%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIK 92
           G N  E + +    T   NY+ +NIAFL  FG+   P L++  HC+PN G C  L N+I+
Sbjct: 30  GQNGNEGSLADTCATN--NYAIVNIAFLVVFGNGQNPVLNLAGHCDPNAGACTGLSNDIR 89

Query: 93  GCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVA-----AFFDGVSKSRPL 139
            CQ++   +   L G     +Y+  S+ DA+ VA      +  G S +RPL
Sbjct: 90  ACQNQGIKVMLSLGGG--AGSYFLSSADDARNVANYLWNNYLGGQSNTRPL 136

[Close]
BLAST of Cla004914 vs. Swiss-Prot
Match: CHIT3_VITVI (Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-09
Identity = 44/114 (38.60%), Postives = 58/114 (50.88%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSIN---YSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDN 92
           G N  E T     +TQ+ N   YS +NIAFL+KFG+   P++++  HCNP +  C  +  
Sbjct: 33  GQNGNEGT-----LTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTSVST 92

Query: 93  EIKGCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVA-----AFFDGVSKSRPL 139
            I+ CQ++ G      IG   G +Y   SS DA+ VA      F  G S SRPL
Sbjct: 93  GIRNCQNR-GIKVMLSIGGGAG-SYSLSSSNDAQNVANYLWNNFLGGQSSSRPL 139

[Close]
BLAST of Cla004914 vs. Swiss-Prot
Match: CHIB_TOBAC (Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-08
Identity = 47/139 (33.81%), Postives = 65/139 (46.76%), Query Frame = 1 

Query: 14  FLLDYYLVPIFSSVRL--------ESIGDNKKEKTASKMHVTQSINYSTINIAFLSKFGS 73
           F+L  +L+ + S V+         + +G+ K   T +      S  Y+ +NIAFLS FG+
Sbjct: 9   FILPIFLLLLTSKVKAGDIVVYWGQDVGEGKLIDTCN------SGLYNIVNIAFLSSFGN 68

Query: 74  RLKPKLDILSHCNPNNGRCKDLDNEIKGCQHKAGAIDQQLIGDNCGNNYYNPSSA-DAKQ 133
              PKL++  HC P++G C+ L   I+ CQ     I   + G   G   Y  SS  DA+Q
Sbjct: 69  FQTPKLNLAGHCEPSSGGCQQLTKSIRHCQSIGIKIMLSIGG---GTPTYTLSSVDDARQ 128

Query: 134 VA-----AFFDGVSKSRPL 139
           VA      F  G S  RPL
Sbjct: 129 VADYLWNNFLGGQSSFRPL 138

[Close]
BLAST of Cla004914 vs. TrEMBL
Match: A0A0D2PAE8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G116500 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-10
Identity = 49/108 (45.37%), Postives = 61/108 (56.48%), Query Frame = 1 

Query: 39  KTASKMHVTQSIN---YSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIKGCQ 98
           ++ S+  + Q+ N   Y  +NIAFL+KFGSR  P L++  HCNP NG C+   +EIK CQ
Sbjct: 36  QSGSETTLNQTCNTGRYKYVNIAFLNKFGSRRTPGLNLAGHCNPANGGCRVASSEIKHCQ 95

Query: 99  HKAGAIDQQLIGDNCGNNYYNPSSADAKQVAA-----FFDGVSKSRPL 139
            K G      IG   G  Y   S ADAK+VAA     F  G S SRPL
Sbjct: 96  SK-GIKVMLSIGGGIG-QYSLASKADAKRVAAYLYNNFLGGRSASRPL 141

[Close]
BLAST of Cla004914 vs. TrEMBL
Match: M0ZGC2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000074 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-10
Identity = 46/111 (41.44%), Postives = 60/111 (54.05%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIK 92
           G N  E T ++   T+  NY  +NIAFL  FG+  +P +D+  HCNPN G C  L  +IK
Sbjct: 33  GQNGGEGTLAETCATK--NYDLVNIAFLPTFGNGQQPMIDLSGHCNPNVGECTKLSTDIK 92

Query: 93  GCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVAA-----FFDGVSKSRPL 139
            CQ K G      IG   G +YY  S+ DA++VA      F  G S +RPL
Sbjct: 93  SCQAK-GIKVMLSIGGGAG-SYYLASADDAREVATYLWNNFLGGQSTTRPL 139

[Close]
BLAST of Cla004914 vs. TrEMBL
Match: A0A067L7G6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20076 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-10
Identity = 47/111 (42.34%), Postives = 60/111 (54.05%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIK 92
           G N  E T ++   T   NY  +NIAFL  FG+   P++D+  HC+P +  C  L ++IK
Sbjct: 31  GQNGNEGTLAETCATG--NYDFVNIAFLPTFGNGQTPRIDLSGHCDPYSNGCTGLSSDIK 90

Query: 93  GCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVAA-----FFDGVSKSRPL 139
            CQ K G      IG   G +YY  S+ DAKQVAA     F  G S SRPL
Sbjct: 91  SCQAK-GIKVMLSIGGGAG-SYYLASTQDAKQVAAYLWNNFLGGYSSSRPL 137

[Close]
BLAST of Cla004914 vs. TrEMBL
Match: K4AZR4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.8e-10
Identity = 45/111 (40.54%), Postives = 60/111 (54.05%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIK 92
           G N  E T ++   T+  NY  +NIAFL  FG+  +P +D+  HCNPN G C  L  +IK
Sbjct: 33  GQNGGEGTLAETCATK--NYDFVNIAFLPTFGNGQQPMIDLSGHCNPNVGECTKLSTDIK 92

Query: 93  GCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVAA-----FFDGVSKSRPL 139
            CQ K   +    IG   G +YY  S+ DA++VA      F  G S +RPL
Sbjct: 93  SCQAKGIKVILS-IGGGAG-SYYLASADDAREVATYLWNNFLGGQSTTRPL 139

[Close]
BLAST of Cla004914 vs. TrEMBL
Match: W5BSZ7_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.0e-10
Identity = 48/111 (43.24%), Postives = 55/111 (49.55%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIK 92
           G N  E T +    T   NY  +NIAFLS FG+   P L++  HC P NG C  L ++IK
Sbjct: 33  GQNGGEGTLAATCATG--NYKFVNIAFLSSFGNGQPPVLNLAGHCVPTNGGCASLSSDIK 92

Query: 93  GCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVAA-----FFDGVSKSRPL 139
            CQ   G      IG   G  YY  SS DAK VA      F  G S SRPL
Sbjct: 93  SCQSN-GVKVMLSIGGGAG-GYYLSSSQDAKNVATYLWNNFLGGTSSSRPL 139

[Close]
BLAST of Cla004914 vs. NCBI nr
Match: gi|823155993|ref|XP_012477936.1| (PREDICTED: hevamine-A-like [Gossypium raimondii])

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-10
Identity = 49/108 (45.37%), Postives = 61/108 (56.48%), Query Frame = 1 

Query: 39  KTASKMHVTQSIN---YSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIKGCQ 98
           ++ S+  + Q+ N   Y  +NIAFL+KFGSR  P L++  HCNP NG C+   +EIK CQ
Sbjct: 36  QSGSETTLNQTCNTGRYKYVNIAFLNKFGSRRTPGLNLAGHCNPANGGCRVASSEIKHCQ 95

Query: 99  HKAGAIDQQLIGDNCGNNYYNPSSADAKQVAA-----FFDGVSKSRPL 139
            K G      IG   G  Y   S ADAK+VAA     F  G S SRPL
Sbjct: 96  SK-GIKVMLSIGGGIG-QYSLASKADAKRVAAYLYNNFLGGRSASRPL 141

[Close]
BLAST of Cla004914 vs. NCBI nr
Match: gi|565345119|ref|XP_006339646.1| (PREDICTED: acidic endochitinase-like [Solanum tuberosum])

HSP 1 Score: 73.9 bits (180), Expect = 2.4e-10
Identity = 46/111 (41.44%), Postives = 60/111 (54.05%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIK 92
           G N  E T ++   T+  NY  +NIAFL  FG+  +P +D+  HCNPN G C  L  +IK
Sbjct: 33  GQNGGEGTLAETCATK--NYDLVNIAFLPTFGNGQQPMIDLSGHCNPNVGECTKLSTDIK 92

Query: 93  GCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVAA-----FFDGVSKSRPL 139
            CQ K G      IG   G +YY  S+ DA++VA      F  G S +RPL
Sbjct: 93  SCQAK-GIKVMLSIGGGAG-SYYLASADDAREVATYLWNNFLGGQSTTRPL 139

[Close]
BLAST of Cla004914 vs. NCBI nr
Match: gi|970000123|ref|XP_015086563.1| (PREDICTED: LOW QUALITY PROTEIN: endochitinase 2-like [Solanum pennellii])

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-10
Identity = 46/111 (41.44%), Postives = 60/111 (54.05%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIK 92
           G N  E T ++   T+  NY  +NIAFL  FG+  +P +D+  HCNPN G C  L  +IK
Sbjct: 33  GQNGGEGTLAETCATK--NYDFVNIAFLPTFGNGQQPMIDLSGHCNPNVGECTKLSTDIK 92

Query: 93  GCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVAA-----FFDGVSKSRPL 139
            CQ K G      IG   G +YY  S+ DA++VA      F  G S +RPL
Sbjct: 93  SCQAK-GIKVMLSIGGGAG-SYYLASADDAREVATYLWNNFLGGQSTTRPL 139

[Close]
BLAST of Cla004914 vs. NCBI nr
Match: gi|970000123|ref|XP_015086563.1| (PREDICTED: LOW QUALITY PROTEIN: endochitinase 2-like [Solanum pennellii])

HSP 1 Score: 72.8 bits (177), Expect = 5.4e-10
Identity = 45/111 (40.54%), Postives = 60/111 (54.05%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIK 92
           G N  E T ++   T+  NY  +NIAFL  FG+  +P +D+  HCNPN G C  L  +IK
Sbjct: 336 GQNGGEGTLAETCATK--NYDFVNIAFLPTFGNGQQPMIDLSGHCNPNVGECTKLSTDIK 395

Query: 93  GCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVAA-----FFDGVSKSRPL 139
            CQ K   +    IG   G +YY  S+ DA++VA      F  G S +RPL
Sbjct: 396 SCQAKGIKVILS-IGGGAG-SYYLSSADDAREVATYLWNNFLGGQSTTRPL 442


HSP 2 Score: 73.6 bits (179), Expect = 3.2e-10
Identity = 47/111 (42.34%), Postives = 60/111 (54.05%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIK 92
           G N  E T ++   T   NY  +NIAFL  FG+   P++D+  HC+P +  C  L ++IK
Sbjct: 31  GQNGNEGTLAETCATG--NYDFVNIAFLPTFGNGQTPRIDLSGHCDPYSNGCTGLSSDIK 90

Query: 93  GCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVAA-----FFDGVSKSRPL 139
            CQ K G      IG   G +YY  S+ DAKQVAA     F  G S SRPL
Sbjct: 91  SCQAK-GIKVMLSIGGGAG-SYYLASTQDAKQVAAYLWNNFLGGYSSSRPL 137

[Close]
BLAST of Cla004914 vs. NCBI nr
Match: gi|723661360|ref|XP_004231197.2| (PREDICTED: chitinase 1-like [Solanum lycopersicum])

HSP 1 Score: 72.8 bits (177), Expect = 5.4e-10
Identity = 45/111 (40.54%), Postives = 60/111 (54.05%), Query Frame = 1 

Query: 33  GDNKKEKTASKMHVTQSINYSTINIAFLSKFGSRLKPKLDILSHCNPNNGRCKDLDNEIK 92
           G N  E T ++   T+  NY  +NIAFL  FG+  +P +D+  HCNPN G C  L  +IK
Sbjct: 33  GQNGGEGTLAETCATK--NYDFVNIAFLPTFGNGQQPMIDLSGHCNPNVGECTKLSTDIK 92

Query: 93  GCQHKAGAIDQQLIGDNCGNNYYNPSSADAKQVAA-----FFDGVSKSRPL 139
            CQ K   +    IG   G +YY  S+ DA++VA      F  G S +RPL
Sbjct: 93  SCQAKGIKVILS-IGGGAG-SYYLASADDAREVATYLWNNFLGGQSTTRPL 139

The following BLAST results are available for this feature:
BLAST of Cla004914 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHIA_CUCSA2.4e-1036.88Acidic endochitinase OS=Cucumis sativus PE=1 SV=1[more]
CHLY_HEVBR7.1e-1039.64Hevamine-A OS=Hevea brasiliensis PE=1 SV=2[more]
CHIA_TOBAC9.3e-1035.14Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1[more]
CHIT3_VITVI2.7e-0938.60Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1[more]
CHIB_TOBAC3.0e-0833.81Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1[more]
BLAST of Cla004914 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2PAE8_GOSRA1.0e-1045.37Uncharacterized protein OS=Gossypium raimondii GN=B456_004G116500 PE=3 SV=1[more]
M0ZGC2_SOLTU1.7e-1041.44Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000074 PE=3 SV=1[more]
A0A067L7G6_JATCU2.2e-1042.34Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20076 PE=3 SV=1[more]
K4AZR4_SOLLC3.8e-1040.54Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1[more]
W5BSZ7_WHEAT5.0e-1043.24Uncharacterized protein OS=Triticum aestivum PE=3 SV=1[more]
BLAST of Cla004914 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|823155993|ref|XP_012477936.1|1.4e-1045.37PREDICTED: hevamine-A-like [Gossypium raimondii][more]
gi|565345119|ref|XP_006339646.1|2.4e-1041.44PREDICTED: acidic endochitinase-like [Solanum tuberosum][more]
gi|970000123|ref|XP_015086563.1|3.2e-1041.44PREDICTED: LOW QUALITY PROTEIN: endochitinase 2-like [Solanum pennellii][more]
gi|970000123|ref|XP_015086563.1|5.4e-1040.54PREDICTED: LOW QUALITY PROTEIN: endochitinase 2-like [Solanum pennellii][more]
gi|723661360|ref|XP_004231197.2|5.4e-1040.54PREDICTED: chitinase 1-like [Solanum lycopersicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013781Glycoside hydrolase, catalytic domain
IPR017853Glycoside_hydrolase_SF
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla004914Cla004914.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013781Glycoside hydrolase, catalytic domainGENE3DG3DSA:3.20.20.80coord: 35..129
score: 3.1
IPR017853Glycoside hydrolase superfamilyunknownSSF51445(Trans)glycosidasescoord: 35..131
score: 2.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla004914Cla97C01G000690Watermelon (97103) v2wmwmbB235
Cla004914ClCG01G000630Watermelon (Charleston Gray)wcgwmB142
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla004914Cucumber (Chinese Long) v3cucwmB267
Cla004914Cucumber (Chinese Long) v3cucwmB345
Cla004914Cucumber (Chinese Long) v3cucwmB433
Cla004914Watermelon (97103) v2wmwmbB262
Cla004914Watermelon (97103) v2wmwmbB268
Cla004914Wax gourdwgowmB085
Cla004914Wax gourdwgowmB228
Cla004914Watermelon (97103) v1wmwmB119
Cla004914Watermelon (97103) v1wmwmB125
Cla004914Watermelon (97103) v1wmwmB142
Cla004914Cucumber (Gy14) v1cgywmB151
Cla004914Cucumber (Gy14) v1cgywmB400
Cla004914Cucumber (Gy14) v1cgywmB481
Cla004914Cucurbita maxima (Rimu)cmawmB272
Cla004914Cucurbita maxima (Rimu)cmawmB318
Cla004914Cucurbita maxima (Rimu)cmawmB388
Cla004914Cucurbita maxima (Rimu)cmawmB574
Cla004914Cucurbita moschata (Rifu)cmowmB234
Cla004914Cucurbita moschata (Rifu)cmowmB262
Cla004914Cucurbita moschata (Rifu)cmowmB312
Cla004914Cucurbita moschata (Rifu)cmowmB380
Cla004914Cucurbita moschata (Rifu)cmowmB567
Cla004914Melon (DHL92) v3.5.1mewmB029
Cla004914Watermelon (Charleston Gray)wcgwmB295
Cla004914Melon (DHL92) v3.5.1mewmB478
Cla004914Melon (DHL92) v3.5.1mewmB482
Cla004914Watermelon (Charleston Gray)wcgwmB152
Cla004914Watermelon (Charleston Gray)wcgwmB299
Cla004914Cucumber (Chinese Long) v2cuwmB258
Cla004914Cucumber (Chinese Long) v2cuwmB408
Cla004914Cucurbita pepo (Zucchini)cpewmB035
Cla004914Cucurbita pepo (Zucchini)cpewmB187
Cla004914Cucurbita pepo (Zucchini)cpewmB229
Cla004914Cucurbita pepo (Zucchini)cpewmB616
Cla004914Cucurbita pepo (Zucchini)cpewmB708
Cla004914Bottle gourd (USVL1VR-Ls)lsiwmB027
Cla004914Bottle gourd (USVL1VR-Ls)lsiwmB374
Cla004914Bottle gourd (USVL1VR-Ls)lsiwmB375
Cla004914Cucumber (Gy14) v2cgybwmB243
Cla004914Cucumber (Gy14) v2cgybwmB306
Cla004914Cucumber (Gy14) v2cgybwmB381
Cla004914Melon (DHL92) v3.6.1medwmB027
Cla004914Melon (DHL92) v3.6.1medwmB465
Cla004914Melon (DHL92) v3.6.1medwmB471
Cla004914Melon (DHL92) v3.6.1medwmB517
Cla004914Silver-seed gourdcarwmB0294
Cla004914Silver-seed gourdcarwmB0504
Cla004914Silver-seed gourdcarwmB0537
Cla004914Silver-seed gourdcarwmB0991