Cla004096 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla004096
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Bark storage protein A (AHRD V1 -- BSPA_POPDE); contains Interpro domain(s) IPR018017 Nucleoside phosphorylase, family 1
Location	Chr6 : 12652942 .. 12655468 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGGCATTTGATATTGGTGATATTGGTATTGGAGATCAGCCTCATGACCCATGCAGCTGTTCCTTCGAGTGTTTTGAAACAGATTGTTATAGTTAACAAAAATGGCCCTTATTTGGGCATAGTGGTGCCTAATGCCTTTGAAATGAACCCTCTTCTTCAATCTCCAAACTTTGTGGTTGATCACAATCTTCCACACTTGGATTTTTCAGGTTTTCCAAATCATCATCTGTATGTTTTTGTGTAAGGATGACATCAGGTTGATATTCATTCTTCTTATAGTTTGCTTATGTAGATATTGATAATATGTTGTTTCTTTAGTTTATTTAATTTGAAAAATACGAAATAACTTTTCTTCTTTCTTTCGGATTGATTGAGAATTTTAAAATTTAGAAAGGGATGAATTGAAAATATTTGATGACTTAGAGTTAGGGGGTCAAACCTCTATCCCCTTGGATGAGAATAAGGATCAAAATATTAACATTGATAGCAAAATATTTAATTTTATGGATATATCAATAAACTCTTGATATCGATAGGTTTTTTTTTTTTTTTTTTTTTTGTAAAGAAAGAAATTTATATAAATTATTTAAACTAATAATTGGGTTGTTTTAATTTCCAAATTGAGTTATAAATCTTAGGGAAAATTGCAAAAACTACCTCTCAAGTATGGTGGTAGTTGCAATTACACCTTCAAACTTTCAATTATAAATAATAGCCCCTAAACTTCAAGAAGTGTTAAAATTGGGCCCTCAAACTTACAATAATTCTAGAAATTGAACCCACAAATGATAAAAGTTGAACTCTCAAATTTATACAATTATGTAAATTTGAGGGTCCAATTTTAACACATGTATAAGTTTGAGGGCTTAATTTTTAAAATTGAAAGTTTAAGAGAATAATTGCAACTACCACTATACTTTAGAGGTGGTTTTTTTGCAATCTACCCTATTATTATTATTCATATTTATATTGAGATTAATATATGATAATTTGCTATGTTTTATGTGTATTTTTAGTAGACATGACCCTTAATATCGATGTTGAACCTTCCAATTTACGGATGTATTAATGTATCGATGAATATTTCACTCTTTGGTTAAGAGCACATGCCTTAATCAATTGACCGAGATTGGAACCATGAATTAATCTTCCATCTATGAATAGCGTAATGCAGGAATAACCACAGGGTTGCTTCTAATTCTGTTTAGAGTAAAAGCTGTGCTTCACTATGGAACAGTTGGAGATGTAGATCCTCAGCTTGAAATTAGGGACGTAACTATTCCTCAATATTGGGCTCATACAGGCCTATGGAATTGGCAGGTAAGCAAATCCCTTCCCTTTGGATTCTTCTCAAGGGAAAGACTCAAACCAATGTCTTTTTCTTTTGCAAGTTTGTCATTTCAATTCATTTTCTAATTAATTCAAACTTATGAGCAGTGGTTTGGAGATGGACCAGACGACGAACTTGGATTAGAATCCAATGGAGATTACACGAGAAAAATCAGTTTCTTGAAATTTAAAATTGTCCAACTTCAGTATTGTTGATTCAAAGACAGAAACACCTGTGGACAACCTTTCAAACAATGTCTGGTACCAACCAGAAAAGATATTTCCTGTCAATGGAACTCCTGAAATCAGACAACATGTCTTTTGGATTCCTGTGGACAAATACTACTTTTCAGTAGCCAAGAAACTTGAGGTAGTTGTTTGTCTAACCCCACTATCTTCATAATTGAAACAATCATGTTCCAAGTCTATGATCCTAGAGTAGATTAAGTTTTAAGTAATCAGATCAACCTCACTTGATTGGCTTGCTATAGAAAGAGACAAGAAGAGAGCATAACAATCTACCATTTGAAGATTTAAAGCTCTCTCTAATTTGCATGATATGTATGTAATGAGGCCTTATGAAACGTTCCAATTCCATGATAGAATACAAAACAGAATCACAGTGTATTTCGCTATAAAAGGTAAGAGCTACAAGATAACAAAAGTATTCAAGGCACTTGGAACCTCTCCTTTCTTGAGTATACCGATGCAAGCCTAAAATCATCAAATCGATTCTCTAACTCAATCATTTTCCCCTTCTATTTATAACCAAATACTCTTTTATTACCCTCATAGCATTTCTATCCTTTTGTTTGAAGAAATAGGTTCTGCATATATGAATGTTATGTTTGAAGAAACATTTTTCATGATTGAAGGGATTGAAGTTTTGGGTGTCTGAATTCAACAAATTACTTACCAAGAGCGCCTGTTGTAGTGAGAGTGCAAAGAGGGGTCAGTGCCAATATGTTTGTTTCCAATAAAGCTTACAAAGAGTTCCGGCAATCAACATTCAATGTGACCTGCTTTGACATGGAAACTGCAGCTGTGGCACTCGTCTGTCTTCAACAAAAGGTACCCTTCATTGCAATTAGATCAGAGGCTCTGCTTTGTCCAATGAGGCCGCCGCCTTTGCTGTATTAGCATCCCAAAACGCTGTCACTGCTCTTGTTAAATTGAACATCACTTTACTGTAA

mRNA sequence

ATGGAGAGGCATTTGATATTGGTGATATTGGTATTGGAGATCAGCCTCATGACCCATGCAGCTGTTCCTTCGAGTGTTTTGAAACAGATTGTTATAGTTAACAAAAATGGCCCTTATTTGGGCATAGTGGTGCCTAATGCCTTTGAAATGAACCCTCTTCTTCAATCTCCAAACTTTGTGGTTGATCACAATCTTCCACACTTGGATTTTTCAGGAATAACCACAGGGTTGCTTCTAATTCTGTTTAGAGTAAAAGCTGTGCTTCACTATGGAACAGTTGGAGATGTAGATCCTCAGCTTGAAATTAGGGACGTAACTATTCCTCAATATTGGGCTCATACAGGCCTATGGAATTGGCAGACAGAAACACCTGTGGACAACCTTTCAAACAATGTCTGGTACCAACCAGAAAAGATATTTCCTGTCAATGGAACTCCTGAAATCAGACAACATGTCTTTTGGATTCCTGTGGACAAATACTACTTTTCAGTAGCCAAGAAACTTGAGGGATTGAAGTTTATCAGAGGCTCTGCTTTGTCCAATGAGGCCGCCGCCTTTGCTGTATTAGCATCCCAAAACGCTGTCACTGCTCTTGTTAAATTGAACATCACTTTACTGTAA

Coding sequence (CDS)

ATGGAGAGGCATTTGATATTGGTGATATTGGTATTGGAGATCAGCCTCATGACCCATGCAGCTGTTCCTTCGAGTGTTTTGAAACAGATTGTTATAGTTAACAAAAATGGCCCTTATTTGGGCATAGTGGTGCCTAATGCCTTTGAAATGAACCCTCTTCTTCAATCTCCAAACTTTGTGGTTGATCACAATCTTCCACACTTGGATTTTTCAGGAATAACCACAGGGTTGCTTCTAATTCTGTTTAGAGTAAAAGCTGTGCTTCACTATGGAACAGTTGGAGATGTAGATCCTCAGCTTGAAATTAGGGACGTAACTATTCCTCAATATTGGGCTCATACAGGCCTATGGAATTGGCAGACAGAAACACCTGTGGACAACCTTTCAAACAATGTCTGGTACCAACCAGAAAAGATATTTCCTGTCAATGGAACTCCTGAAATCAGACAACATGTCTTTTGGATTCCTGTGGACAAATACTACTTTTCAGTAGCCAAGAAACTTGAGGGATTGAAGTTTATCAGAGGCTCTGCTTTGTCCAATGAGGCCGCCGCCTTTGCTGTATTAGCATCCCAAAACGCTGTCACTGCTCTTGTTAAATTGAACATCACTTTACTGTAA

Protein sequence

MERHLILVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHNLPHLDFSGITTGLLLILFRVKAVLHYGTVGDVDPQLEIRDVTIPQYWAHTGLWNWQTETPVDNLSNNVWYQPEKIFPVNGTPEIRQHVFWIPVDKYYFSVAKKLEGLKFIRGSALSNEAAAFAVLASQNAVTALVKLNITLL

Homology

[Close]

BLAST of Cla004096 vs. Swiss-Prot
Match: BSPA_POPDE (Bark storage protein A OS=Populus deltoides GN=BSPA PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06
Identity = 31/108 (28.70%), Postives = 52/108 (48.15%), Query Frame = 1


Query: 74  TTGLLLILFRVKAVLHYGTVGDVDPQLEIR-DVTIPQYWAHTGLWNWQT----------- 133
           T  +LL+ F +  V+++G  G +D +  +  DV++PQ  A TG+WNW+            
Sbjct: 89  TLQILLVRFNIHGVIYFGNAGSLDKKTMVPGDVSVPQAVAFTGVWNWKKFGSEKGKLVFG 148

Query: 134 ----ETPVDNLSNNVWYQPEKIFPVNGTPEIRQHVFWIPVDKYYFSVA 166
                   +NL   V Y+  K+F  +  P   + VFW+P+ K +++ A
Sbjct: 149 DFNYPENGENLLGTVEYEKIKMFSPSEAP---KEVFWLPITKSWYNAA 193

[Close]

BLAST of Cla004096 vs. TrEMBL
Match: A0A0A0M0L4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G696520 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.6e-65
Identity = 141/242 (58.26%), Postives = 152/242 (62.81%), Query Frame = 1


Query: 1   MERHLILVIL-----VLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQ 60
           ME  LILVIL     VLEISLMTHAAVP S++K I  VNKNGPYLGIVVPNAFEMNPLLQ
Sbjct: 1   MESRLILVILSVVVMVLEISLMTHAAVPKSIMKHIDRVNKNGPYLGIVVPNAFEMNPLLQ 60

Query: 61  SPNFVVDHNLPHLDFS--------------------------GITTGLLLILFRVKAVLH 120
           SP+ + DHNLPHLDFS                          G TT LLL LFRVK V+H
Sbjct: 61  SPSLMADHNLPHLDFSGRRFRFGRIKDKKVIIVMTGLSMLNAGTTTQLLLALFRVKGVIH 120

Query: 121 YGTVGDVDPQLEIRDVTIPQYWAHTGLWNWQ----------------------------- 176
            G  G+ DPQLEI DVTIPQYWAHTGLWNWQ                             
Sbjct: 121 CGIAGNADPQLEIGDVTIPQYWAHTGLWNWQRFGDGPDDELALESNGDYTRKIGFLKFSN 180

[Close]

BLAST of Cla004096 vs. TrEMBL
Match: A0A0A0M0L4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G696520 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.5e-02
Identity = 28/31 (90.32%), Postives = 28/31 (90.32%), Query Frame = 1


Query: 176 GSALSNEAAAFAVLASQNAVTALVKLNITLL 207
           GSALSNEAAAFAVLASQNA TALVK  ITLL
Sbjct: 318 GSALSNEAAAFAVLASQNAATALVKF-ITLL 347

HSP 2 Score: 204.1 bits (518), Expect = 1.6e-49
Identity = 110/233 (47.21%), Postives = 138/233 (59.23%), Query Frame = 1


Query: 1   MERHLILVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFV 60
           ME  + LV++ L IS + + AV  + +++I ++NK GPYLGIVVPN FE+NPLLQS +FV
Sbjct: 7   MELMVFLVLVFLGISSIAYGAVSHTTMRKIDMLNKKGPYLGIVVPNFFELNPLLQSTSFV 66

Query: 61  VDHNLPHLDFSG--------------------------ITTGLLLILFRVKAVLHYGTVG 120
            D  LP+LDFSG                          I+T LLL LF+VK V+HYG  G
Sbjct: 67  ADQKLPYLDFSGRRFRIGRLEDESVIIVMTGLSMLNAGISTQLLLSLFKVKGVVHYGIAG 126

Query: 121 DVDPQLEIRDVTIPQYWAHTGLWNWQ-------------------------------TET 173
           + DPQL+I DVTIPQ+WAHTGLWNWQ                                ET
Sbjct: 127 NADPQLQIGDVTIPQFWAHTGLWNWQRFGDGPGNELSLESFGDYTRKVGHIKFSDFNNET 186

[Close]

BLAST of Cla004096 vs. TrEMBL
Match: M5VX96_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018203mg PE=4 SV=1)

HSP 1 Score: 32.3 bits (72), Expect = 8.3e+02
Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 1


Query: 176 GSALSNEAAAFAVLASQNAVTALVKLNITLL 207
           GS+LSNEA  FA LA+QNAV  +++  I+LL
Sbjct: 317 GSSLSNEANTFASLAAQNAVDVVLRF-ISLL 346

HSP 2 Score: 200.7 bits (509), Expect = 1.8e-48
Identity = 111/233 (47.64%), Postives = 136/233 (58.37%), Query Frame = 1


Query: 5   LILVILVLEI-SLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDH 64
           L+LV+LVL   S   + AV SS L +I  +N+ GPYLGI+VPN+FEMNPL+QS +FV D 
Sbjct: 9   LLLVVLVLGFGSNGVYGAVSSSTLSKISRINEEGPYLGIIVPNSFEMNPLMQSGSFVADL 68

Query: 65  NLPHLDFSG--------------------------ITTGLLLILFRVKAVLHYGTVGDVD 124
            LP+LDFSG                          I T LLL LF+VK VLHYG  G  +
Sbjct: 69  ELPYLDFSGRRFRIGRLKNEKVIIVMTGLSMLNAGIATQLLLSLFKVKGVLHYGVAGSAN 128

Query: 125 PQLEIRDVTIPQYWAHTGLWNWQT--ETPVD----------------------------- 176
           PQL+I DVTIPQYWAHTGLWNWQ   + P D                             
Sbjct: 129 PQLQIGDVTIPQYWAHTGLWNWQRYGDGPEDELALESNGDYTRKIGYLKFSDYNNGTECS 188

[Close]

BLAST of Cla004096 vs. TrEMBL
Match: A0A061GLK5_THECC (Phosphorylase superfamily protein OS=Theobroma cacao GN=TCM_037841 PE=4 SV=1)

HSP 1 Score: 36.2 bits (82), Expect = 5.7e+01
Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 1


Query: 176 GSALSNEAAAFAVLASQNAVTALV 200
           GSALSNEAA FA LA+QN+V+ L+
Sbjct: 316 GSALSNEAAVFATLAAQNSVSVLL 339

HSP 2 Score: 198.0 bits (502), Expect = 1.1e-47
Identity = 107/226 (47.35%), Postives = 131/226 (57.96%), Query Frame = 1


Query: 5   LILVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHN 64
           L+  ++VL ++   +  V    +++I  VNK GPYLGIVVPNAFEMNPLLQSP+F  +  
Sbjct: 14  LLGFVVVLVVANRAYGEVSQYSIREIDRVNKEGPYLGIVVPNAFEMNPLLQSPSFEPNLQ 73

Query: 65  LPHLDFSG--------------------------ITTGLLLILFRVKAVLHYGTVGDVDP 124
           LP+LDFSG                          +TT LLL LF+V  VLHYG  G+ +P
Sbjct: 74  LPYLDFSGRRFRIGKVENVKVIIVMTGLSMINAGVTTQLLLSLFKVNGVLHYGIAGNANP 133

Query: 125 QLEIRDVTIPQYWAHTGLWNWQT--ETP------------------------------VD 173
            L+I DVTIPQYWAHTGLW+WQ   E P                              V+
Sbjct: 134 SLQIGDVTIPQYWAHTGLWSWQRFGEEPNDQLPLESNGDYTREIGFLEFSHFNNRSKSVE 193

[Close]

BLAST of Cla004096 vs. TrEMBL
Match: A0A067KC54_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07273 PE=4 SV=1)

HSP 1 Score: 33.1 bits (74), Expect = 4.9e+02
Identity = 16/25 (64.00%), Postives = 21/25 (84.00%), Query Frame = 1


Query: 176 GSALSNEAAAFAVLASQNAVTALVK 201
           GSA+SNEA  F+ LA+QNAV AL++
Sbjct: 317 GSAVSNEADIFSSLAAQNAVDALLR 341

HSP 2 Score: 197.6 bits (501), Expect = 1.5e-47
Identity = 107/245 (43.67%), Postives = 141/245 (57.55%), Query Frame = 1


Query: 1   MERHLILVILVLEI---------SLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMN 60
           M +HL +++L   I         S   + A+ ++ +++I  VN+ GPYLGIVVPN+FEMN
Sbjct: 1   MRKHLKVIMLGFVILVWGVCSSTSGRAYGAISTATMQEIDRVNEKGPYLGIVVPNSFEMN 60

Query: 61  PLLQSPNFVVDHNLPHLDF--------------------------SGITTGLLLILFRVK 120
           PLLQSP+FV D  +P+LD+                          +GI T LLLILF+VK
Sbjct: 61  PLLQSPSFVADLEVPYLDYFGRRFRFGKVENEKVIIVMTGLSMLNAGIATQLLLILFKVK 120

Query: 121 AVLHYGTVGDVDPQLEIRDVTIPQYWAHTGLWN--------------------------- 176
            VLHYG  G+ +PQL+I DVTIPQYWAHTGLWN                           
Sbjct: 121 GVLHYGIAGNANPQLQIGDVTIPQYWAHTGLWNWQRYGDGPNEELALESNGDYTREIGYL 180

[Close]

BLAST of Cla004096 vs. NCBI nr
Match: gi|659125548|ref|XP_008462741.1| (PREDICTED: bark storage protein A [Cucumis melo])

HSP 1 Score: 257.3 bits (656), Expect = 2.3e-65
Identity = 139/242 (57.44%), Postives = 155/242 (64.05%), Query Frame = 1


Query: 1   MERHLILVIL-----VLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQ 60
           ME HLILVIL     + EISLMTHAAVP +++K I  VNKNGPYLGIVVPNAFEM+PLLQ
Sbjct: 1   MESHLILVILSVAVMISEISLMTHAAVPKTIMKHIGRVNKNGPYLGIVVPNAFEMDPLLQ 60

Query: 61  SPNFVVDHNLPHLDF--------------------------SGITTGLLLILFRVKAVLH 120
           SP+ VVDH+LP+ DF                          +G TT LLL LFRVK V+H
Sbjct: 61  SPSLVVDHDLPYFDFLGRWFRFGRIRGKKVIIVMTGLSMLNAGTTTELLLTLFRVKGVIH 120

Query: 121 YGTVGDVDPQLEIRDVTIPQYWAHTGLWNWQ----------------------------- 176
           YG  G+ DPQLEI DVTIP+YWAHTGLWNWQ                             
Sbjct: 121 YGIAGNADPQLEIGDVTIPRYWAHTGLWNWQRIGDGPDDELALESNGDYTRKIGFLKFSN 180

[Close]

BLAST of Cla004096 vs. NCBI nr
Match: gi|659125548|ref|XP_008462741.1| (PREDICTED: bark storage protein A [Cucumis melo])

HSP 1 Score: 45.1 bits (105), Expect = 1.8e-01
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 1


Query: 176 GSALSNEAAAFAVLASQNAVTALVKLNITLL 207
           GSALSNEAA FAVLASQNA TALVK  I+LL
Sbjct: 318 GSALSNEAATFAVLASQNAATALVKF-ISLL 347

HSP 2 Score: 255.8 bits (652), Expect = 6.6e-65
Identity = 141/242 (58.26%), Postives = 152/242 (62.81%), Query Frame = 1


Query: 1   MERHLILVIL-----VLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQ 60
           ME  LILVIL     VLEISLMTHAAVP S++K I  VNKNGPYLGIVVPNAFEMNPLLQ
Sbjct: 1   MESRLILVILSVVVMVLEISLMTHAAVPKSIMKHIDRVNKNGPYLGIVVPNAFEMNPLLQ 60

Query: 61  SPNFVVDHNLPHLDFS--------------------------GITTGLLLILFRVKAVLH 120
           SP+ + DHNLPHLDFS                          G TT LLL LFRVK V+H
Sbjct: 61  SPSLMADHNLPHLDFSGRRFRFGRIKDKKVIIVMTGLSMLNAGTTTQLLLALFRVKGVIH 120

Query: 121 YGTVGDVDPQLEIRDVTIPQYWAHTGLWNWQ----------------------------- 176
            G  G+ DPQLEI DVTIPQYWAHTGLWNWQ                             
Sbjct: 121 CGIAGNADPQLEIGDVTIPQYWAHTGLWNWQRFGDGPDDELALESNGDYTRKIGFLKFSN 180

[Close]

BLAST of Cla004096 vs. NCBI nr
Match: gi|778664433|ref|XP_011660294.1| (PREDICTED: bark storage protein A [Cucumis sativus])

HSP 1 Score: 48.1 bits (113), Expect = 2.1e-02
Identity = 28/31 (90.32%), Postives = 28/31 (90.32%), Query Frame = 1


Query: 176 GSALSNEAAAFAVLASQNAVTALVKLNITLL 207
           GSALSNEAAAFAVLASQNA TALVK  ITLL
Sbjct: 318 GSALSNEAAAFAVLASQNAATALVKF-ITLL 347

HSP 2 Score: 209.5 bits (532), Expect = 5.4e-51
Identity = 104/217 (47.93%), Postives = 140/217 (64.52%), Query Frame = 1


Query: 1   MERHLILVILVLEI---------SLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMN 60
           M +HL +++L   I         S   + A+ ++ +++I  VN+ GPYLGI+VPN+FEMN
Sbjct: 1   MRKHLKVIMLGFVILVWGVCSSTSGRAYGAISTATMQEIDRVNEKGPYLGIIVPNSFEMN 60

Query: 61  PLLQSPNFVVDHNLPHLDFSGITTGLLLILFRVKAVLHYGTVGDVDPQLEIRDVTIPQYW 120
           PLLQSP+FV D  +P+LD+ GITT LLLILF+VK VLHYG  G+ +PQL+I DVTIP+YW
Sbjct: 61  PLLQSPSFVADLKVPYLDYFGITTQLLLILFKVKGVLHYGIAGNANPQLQIGDVTIPRYW 120

Query: 121 AHTGLWN-------------------------------WQTET----PVDNLSNNVWYQP 174
           AHTGLWN                               +Q  +    P+DN  NNVWYQP
Sbjct: 121 AHTGLWNWQRYGDGTSEELALESNGDYTREIGYLRFANYQNASENGKPIDNFLNNVWYQP 180

[Close]

BLAST of Cla004096 vs. NCBI nr
Match: gi|743936157|ref|XP_011012466.1| (PREDICTED: bark storage protein A isoform X2 [Populus euphratica])

HSP 1 Score: 33.9 bits (76), Expect = 4.1e+02
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 1


Query: 176 GSALSNEAAAFAVLASQNAVTALVKLNITLL 207
           GSA+SNEA  FA LA+QNAV A ++  ITLL
Sbjct: 294 GSAVSNEADIFASLAAQNAVDASLRF-ITLL 323

HSP 2 Score: 206.8 bits (525), Expect = 3.5e-50
Identity = 115/258 (44.57%), Postives = 145/258 (56.20%), Query Frame = 1


Query: 5   LILVILVLEISLMTHAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNPLLQSPNFVVDHN 64
           ++ ++LVL +S  ++ AV  S + +I  +NK GPYLGIVVPN FEMNPLLQS +FV D  
Sbjct: 10  MVFLLLVLGLSSRSYGAVSHSTMNKIYRINKEGPYLGIVVPNFFEMNPLLQSTSFVADQK 69

Query: 65  LPHLDFSG--------------------------ITTGLLLILFRVKAVLHYGTVGDVDP 124
           LP+LDF+G                          I+T LL ILF+VK V+HYG  G+ DP
Sbjct: 70  LPYLDFAGRRFRIGRLEDKKVIIVMTGLSMLNAGISTQLLQILFKVKGVVHYGIAGNADP 129

Query: 125 QLEIRDVTIPQYWAHTGLWNWQ-----------------------------------TET 184
           QL+I DVTIPQ+WAHTGLWNWQ                                     T
Sbjct: 130 QLQIGDVTIPQFWAHTGLWNWQRFGDGPNDELSLESFGDYTREVGYIKFSDFSNKTKVGT 189

Query: 185 PVDNLSNNVWYQPEKIFPVNGTPEIRQHVFWIPVDKYYFSVAKKLEGLKFIRGSALSNEA 200
            V NL NN WYQPE+ FPV+GTPE+RQH FW+PV+  YFS+ KKLEGLK   GS ++   
Sbjct: 190 SVPNLLNNAWYQPEETFPVHGTPEVRQHAFWVPVNHKYFSLTKKLEGLKL--GSCVNTTC 249

[Close]

BLAST of Cla004096 vs. NCBI nr
Match: gi|694322790|ref|XP_009352502.1| (PREDICTED: bark storage protein A [Pyrus x bretschneideri])

HSP 1 Score: 32.0 bits (71), Expect = 1.6e+03
Identity = 15/25 (60.00%), Postives = 20/25 (80.00%), Query Frame = 1


Query: 176 GSALSNEAAAFAVLASQNAVTALVK 201
           GS+LSNEA  FA LA+QNAV  +++
Sbjct: 316 GSSLSNEANTFASLAAQNAVDVVLR 340

HSP 2 Score: 206.8 bits (525), Expect = 3.5e-50
Identity = 117/239 (48.95%), Postives = 138/239 (57.74%), Query Frame = 1


Query: 1   MERHL----ILVILVLEISLMT----HAAVPSSVLKQIVIVNKNGPYLGIVVPNAFEMNP 60
           MERHL    IL  LVL + + T    HAAV    +++I  +NK+GPYLGIVVPN FEMNP
Sbjct: 1   MERHLKVVVILSFLVLLLGISTSSRAHAAVSQFTIRKIDKINKDGPYLGIVVPNTFEMNP 60

Query: 61  LLQSPNFVVDHNLPHLDFSG--------------------------ITTGLLLILFRVKA 120
           LLQSP+F  D  LP+LDFSG                          ITT LLL LF VK 
Sbjct: 61  LLQSPSFEADQKLPYLDFSGRRFRIGVLENKKVIIVMTGLGMLNAGITTQLLLSLFEVKG 120

Query: 121 VLHYGTVGDVDPQLEIRDVTIPQYWAHTGLWNWQ-------------------------- 173
           V+HYG  G+ +P+L+I DVTIPQYWAHTGLWNWQ                          
Sbjct: 121 VVHYGIAGNANPKLQIGDVTIPQYWAHTGLWNWQRFGDGAEDELALESNGDFTRKIGYLK 180

The following BLAST results are available for this feature:

BLAST of Cla004096 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BSPA_POPDE	1.1e-06	28.70	Bark storage protein A OS=Populus deltoides GN=BSPA PE=2 SV=1	[more]

BLAST of Cla004096 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0L4_CUCSA	4.6e-65	58.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G696520 PE=4 SV=1	[more]
A0A0A0M0L4_CUCSA	1.5e-02	90.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G696520 PE=4 SV=1	[more]
M5VX96_PRUPE	8.3e+02	58.06	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018203mg PE=4 SV=1	[more]
A0A061GLK5_THECC	5.7e+01	70.83	Phosphorylase superfamily protein OS=Theobroma cacao GN=TCM_037841 PE=4 SV=1	[more]
A0A067KC54_JATCU	4.9e+02	64.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07273 PE=4 SV=1	[more]

BLAST of Cla004096 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125548\|ref\|XP_008462741.1\|	2.3e-65	57.44	PREDICTED: bark storage protein A [Cucumis melo]	[more]
gi\|659125548\|ref\|XP_008462741.1\|	1.8e-01	83.87	PREDICTED: bark storage protein A [Cucumis melo]	[more]
gi\|778664433\|ref\|XP_011660294.1\|	2.1e-02	90.32	PREDICTED: bark storage protein A [Cucumis sativus]	[more]
gi\|743936157\|ref\|XP_011012466.1\|	4.1e+02	64.52	PREDICTED: bark storage protein A isoform X2 [Populus euphratica]	[more]
gi\|694322790\|ref\|XP_009352502.1\|	1.6e+03	60.00	PREDICTED: bark storage protein A [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000845	Nucleoside_phosphorylase_d
IPR018017	Nucleoside phosphorylase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009116	nucleoside metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009116	nucleoside metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003824	catalytic activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU78136	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla004096	Cla004096.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU78136	WMU78136	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000845	Nucleoside phosphorylase domain	GENE3D	G3DSA:3.40.50.1580		coord: 72..181 score: 4.
IPR000845	Nucleoside phosphorylase domain	PFAM	PF01048	PNP_UDP_1	coord: 73..167 score: 7.
IPR000845	Nucleoside phosphorylase domain	unknown	SSF53167	Purine and uridine phosphorylases	coord: 42..199 score: 2.3
IPR018017	Nucleoside phosphorylase	PANTHER	PTHR21234	PURINE NUCLEOSIDE PHOSPHORYLASE	coord: 19..175 score: 1.2
None	No IPR available	PANTHER	PTHR21234:SF19	PHOSPHORYLASE SUPERFAMILY PROTEIN	coord: 19..175 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla004096	Cla97C06G118570	Watermelon (97103) v2	wmwmbB406
Cla004096	Csa1G696520	Cucumber (Chinese Long) v2	cuwmB089
Cla004096	MELO3C024695	Melon (DHL92) v3.5.1	mewmB291
Cla004096	ClCG06G008810	Watermelon (Charleston Gray)	wcgwmB344
Cla004096	CSPI01G33910	Wild cucumber (PI 183967)	cpiwmB095
Cla004096	Cucsa.332420	Cucumber (Gy14) v1	cgywmB600
Cla004096	CmaCh10G006360	Cucurbita maxima (Rimu)	cmawmB070
Cla004096	CmoCh10G006700	Cucurbita moschata (Rifu)	cmowmB062
Cla004096	Lsi06G008490	Bottle gourd (USVL1VR-Ls)	lsiwmB419
Cla004096	Cp4.1LG18g04120	Cucurbita pepo (Zucchini)	cpewmB375
Cla004096	CsGy1G032470	Cucumber (Gy14) v2	cgybwmB088
Cla004096	MELO3C024695.2	Melon (DHL92) v3.6.1	medwmB285
Cla004096	Carg09840	Silver-seed gourd	carwmB0127
Cla004096	CsaV3_1G045800	Cucumber (Chinese Long) v3	cucwmB099
Cla004096	Bhi02G000979	Wax gourd	wgowmB688

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla004096	Cucumber (Gy14) v1	cgywmB176
Cla004096	Cucumber (Gy14) v1	cgywmB653
Cla004096	Cucurbita maxima (Rimu)	cmawmB137
Cla004096	Cucurbita maxima (Rimu)	cmawmB181
Cla004096	Cucurbita maxima (Rimu)	cmawmB361
Cla004096	Cucurbita maxima (Rimu)	cmawmB773
Cla004096	Cucurbita moschata (Rifu)	cmowmB123
Cla004096	Cucurbita moschata (Rifu)	cmowmB168
Cla004096	Cucurbita moschata (Rifu)	cmowmB767
Cla004096	Cucurbita moschata (Rifu)	cmowmB866
Cla004096	Melon (DHL92) v3.5.1	mewmB254
Cla004096	Melon (DHL92) v3.5.1	mewmB290
Cla004096	Melon (DHL92) v3.5.1	mewmB433
Cla004096	Watermelon (Charleston Gray)	wcgwmB044
Cla004096	Watermelon (Charleston Gray)	wcgwmB112
Cla004096	Cucumber (Chinese Long) v2	cuwmB174
Cla004096	Cucumber (Chinese Long) v2	cuwmB612
Cla004096	Cucurbita pepo (Zucchini)	cpewmB127
Cla004096	Cucurbita pepo (Zucchini)	cpewmB345
Cla004096	Cucurbita pepo (Zucchini)	cpewmB680
Cla004096	Cucurbita pepo (Zucchini)	cpewmB821
Cla004096	Bottle gourd (USVL1VR-Ls)	lsiwmB122
Cla004096	Cucumber (Gy14) v2	cgybwmB165
Cla004096	Melon (DHL92) v3.6.1	medwmB247
Cla004096	Melon (DHL92) v3.6.1	medwmB284
Cla004096	Melon (DHL92) v3.6.1	medwmB421
Cla004096	Silver-seed gourd	carwmB0039
Cla004096	Silver-seed gourd	carwmB0571
Cla004096	Silver-seed gourd	carwmB0747
Cla004096	Silver-seed gourd	carwmB1032
Cla004096	Cucumber (Chinese Long) v3	cucwmB186
Cla004096	Cucumber (Chinese Long) v3	cucwmB643
Cla004096	Watermelon (97103) v2	wmwmbB393
Cla004096	Watermelon (97103) v2	wmwmbB421
Cla004096	Wax gourd	wgowmB155
Cla004096	Wax gourd	wgowmB647
Cla004096	Wax gourd	wgowmB680
Cla004096	Watermelon (97103) v1	wmwmB039
Cla004096	Watermelon (97103) v1	wmwmB163