Cla004028 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAAGTGAATGGCCAAGCAGAGGAAGCAGTCATTATCGTCCTGAACAATCCGAAACCAAAACCATGACAGAATTGAAAACAGAGCCTACAGAAATCATCCCTGTAATATACTACCTCACTCGCCATGGCCAACTCCAGCATCCTCATTTGCTGGAAGTTCCTCTTTCTTCTTCTCACGGACTCTTTCTCAGAGGTAAACTTAACCTTTTCTTCACTTCATCAAACGATTTCTTTCATTTTTCAAAATTTCACTCCCATTTGCTTCTTAGATGTGATCAAAAGACTGGATATCCTCCGAGGAGAAGGCCTTTCCAGATTGTATTCGTGGTCTTCGAAGCGGTAATTACGCCTTTGAGCTTCTGTGTTTGTTTCCAGAGATAATACGATTTTCATAGATTTTTCTTCTACGTTTTTCATCAATCGTACACAAATTCAATTCATATATTGCAATCAATCGAGGAGTTACTTACGATTTCAGGCGGTATAGAAACGGATATGTATGGCAAGACCTATCAGACGACGATTTGATACATCCATCTCAAGGCCAAGAGTACATTCTCAAAGGATCGGAAATACAATTGCTAGAGGCGTCTTCGAGTTTCCGATCTTGTGAAGCATCATCGTCATTTTCGGAGTCGAAATTTTCTTCAGAGACGAACAATTCGAGCACGGATTCGAATGTTGCCGTCGGGGTGAGAAGGAACAATCAGTCGTGGAATTCGCTGGAAGATATTTGCCGGAACGTAGTGTACAAGGCGAGAATCTCCGGCGAAGGCGGGACGAACGCGGCGACGCAGACGGGCGAGAGGCGACGGAGATGGACGGACGGCGTAGCGGCGGAGGAATGCGGCGGAGAGGGATTTTCAAATTCTGGAGTTGGAAGAACGGAGAGCTTGACATCTGTTGATTGTGACGGAGCGACGGATGTGAGAGATCGGACGGCTGGGAAGAGTAACAGGTGGAAGGCATCAACGGTTCTGATGCAGTTGATCAAGTGTAACATCCAAAATTAA ATGTCAAGTGAATGGCCAAGCAGAGGAAGCAGTCATTATCGTCCTGAACAATCCGAAACCAAAACCATGACAGAATTGAAAACAGAGCCTACAGAAATCATCCCTGTAATATACTACCTCACTCGCCATGGCCAACTCCAGCATCCTCATTTGCTGGAAGTTCCTCTTTCTTCTTCTCACGGACTCTTTCTCAGAGATGTGATCAAAAGACTGGATATCCTCCGAGGAGAAGGCCTTTCCAGATTGTATTCGTGGTCTTCGAAGCGGCGGTATAGAAACGGATATGTATGGCAAGACCTATCAGACGACGATTTGATACATCCATCTCAAGGCCAAGAGTACATTCTCAAAGGATCGGAAATACAATTGCTAGAGGCGTCTTCGAGTTTCCGATCTTGTGAAGCATCATCGTCATTTTCGGAGTCGAAATTTTCTTCAGAGACGAACAATTCGAGCACGGATTCGAATGTTGCCGTCGGGGTGAGAAGGAACAATCAGTCGTGGAATTCGCTGGAAGATATTTGCCGGAACGTAGTGTACAAGGCGAGAATCTCCGGCGAAGGCGGGACGAACGCGGCGACGCAGACGGGCGAGAGGCGACGGAGATGGACGGACGGCGTAGCGGCGGAGGAATGCGGCGGAGAGGGATTTTCAAATTCTGGAGTTGGAAGAACGGAGAGCTTGACATCTGTTGATTGTGACGGAGCGACGGATGTGAGAGATCGGACGGCTGGGAAGAGTAACAGGTGGAAGGCATCAACGGTTCTGATGCAGTTGATCAAGTGTAACATCCAAAATTAA ATGTCAAGTGAATGGCCAAGCAGAGGAAGCAGTCATTATCGTCCTGAACAATCCGAAACCAAAACCATGACAGAATTGAAAACAGAGCCTACAGAAATCATCCCTGTAATATACTACCTCACTCGCCATGGCCAACTCCAGCATCCTCATTTGCTGGAAGTTCCTCTTTCTTCTTCTCACGGACTCTTTCTCAGAGATGTGATCAAAAGACTGGATATCCTCCGAGGAGAAGGCCTTTCCAGATTGTATTCGTGGTCTTCGAAGCGGCGGTATAGAAACGGATATGTATGGCAAGACCTATCAGACGACGATTTGATACATCCATCTCAAGGCCAAGAGTACATTCTCAAAGGATCGGAAATACAATTGCTAGAGGCGTCTTCGAGTTTCCGATCTTGTGAAGCATCATCGTCATTTTCGGAGTCGAAATTTTCTTCAGAGACGAACAATTCGAGCACGGATTCGAATGTTGCCGTCGGGGTGAGAAGGAACAATCAGTCGTGGAATTCGCTGGAAGATATTTGCCGGAACGTAGTGTACAAGGCGAGAATCTCCGGCGAAGGCGGGACGAACGCGGCGACGCAGACGGGCGAGAGGCGACGGAGATGGACGGACGGCGTAGCGGCGGAGGAATGCGGCGGAGAGGGATTTTCAAATTCTGGAGTTGGAAGAACGGAGAGCTTGACATCTGTTGATTGTGACGGAGCGACGGATGTGAGAGATCGGACGGCTGGGAAGAGTAACAGGTGGAAGGCATCAACGGTTCTGATGCAGTTGATCAAGTGTAACATCCAAAATTAA MSSEWPSRGSSHYRPEQSETKTMTELKTEPTEIIPVIYYLTRHGQLQHPHLLEVPLSSSHGLFLRDVIKRLDILRGEGLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSEIQLLEASSSFRSCEASSSFSESKFSSETNNSSTDSNVAVGVRRNNQSWNSLEDICRNVVYKARISGEGGTNAATQTGERRRRWTDGVAAEECGGEGFSNSGVGRTESLTSVDCDGATDVRDRTAGKSNRWKASTVLMQLIKCNIQN
BLAST of Cla004028 vs. Swiss-Prot
Match: UFC_ARATH (Protein UPSTREAM OF FLC OS=Arabidopsis thaliana GN=UFC PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.7e-23 Identity = 54/110 (49.09%), Postives = 72/110 (65.45%), Query Frame = 1
BLAST of Cla004028 vs. TrEMBL
Match: A0A0A0KLM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180890 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 5.5e-127 Identity = 226/266 (84.96%), Postives = 241/266 (90.60%), Query Frame = 1
BLAST of Cla004028 vs. TrEMBL
Match: V7BA03_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G011100g PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 2.6e-52 Identity = 128/256 (50.00%), Postives = 171/256 (66.80%), Query Frame = 1
BLAST of Cla004028 vs. TrEMBL
Match: A0A061FU34_THECC (Domain of Uncharacterized protein function, putative OS=Theobroma cacao GN=TCM_042839 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 4.6e-49 Identity = 123/253 (48.62%), Postives = 161/253 (63.64%), Query Frame = 1
BLAST of Cla004028 vs. TrEMBL
Match: A0A0S3SLE3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G012300 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 5.1e-48 Identity = 124/261 (47.51%), Postives = 164/261 (62.84%), Query Frame = 1
BLAST of Cla004028 vs. TrEMBL
Match: I1LFC8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G290300 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 2.8e-46 Identity = 121/260 (46.54%), Postives = 158/260 (60.77%), Query Frame = 1
BLAST of Cla004028 vs. NCBI nr
Match: gi|659123394|ref|XP_008461641.1| (PREDICTED: uncharacterized protein LOC103500195 [Cucumis melo]) HSP 1 Score: 464.5 bits (1194), Expect = 1.2e-127 Identity = 228/266 (85.71%), Postives = 245/266 (92.11%), Query Frame = 1
BLAST of Cla004028 vs. NCBI nr
Match: gi|449459970|ref|XP_004147719.1| (PREDICTED: uncharacterized protein LOC101206550 [Cucumis sativus]) HSP 1 Score: 461.8 bits (1187), Expect = 7.9e-127 Identity = 226/266 (84.96%), Postives = 241/266 (90.60%), Query Frame = 1
BLAST of Cla004028 vs. NCBI nr
Match: gi|593594603|ref|XP_007142718.1| (hypothetical protein PHAVU_007G011100g [Phaseolus vulgaris]) HSP 1 Score: 213.8 bits (543), Expect = 3.7e-52 Identity = 128/256 (50.00%), Postives = 171/256 (66.80%), Query Frame = 1
BLAST of Cla004028 vs. NCBI nr
Match: gi|1009120509|ref|XP_015876960.1| (PREDICTED: protein UPSTREAM OF FLC-like [Ziziphus jujuba]) HSP 1 Score: 206.1 bits (523), Expect = 7.8e-50 Identity = 131/288 (45.49%), Postives = 178/288 (61.81%), Query Frame = 1
BLAST of Cla004028 vs. NCBI nr
Match: gi|951023452|ref|XP_014513186.1| (PREDICTED: protein UPSTREAM OF FLC-like [Vigna radiata var. radiata]) HSP 1 Score: 203.8 bits (517), Expect = 3.9e-49 Identity = 124/262 (47.33%), Postives = 168/262 (64.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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