Cla004028 (gene) Watermelon (97103) v1

NameCla004028
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAuxin-regulated protein (AHRD V1 **-- Q945F5_SOLLC); contains Interpro domain(s) IPR010369 Protein of unknown function DUF966
LocationChr7 : 3963149 .. 3964164 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGTGAATGGCCAAGCAGAGGAAGCAGTCATTATCGTCCTGAACAATCCGAAACCAAAACCATGACAGAATTGAAAACAGAGCCTACAGAAATCATCCCTGTAATATACTACCTCACTCGCCATGGCCAACTCCAGCATCCTCATTTGCTGGAAGTTCCTCTTTCTTCTTCTCACGGACTCTTTCTCAGAGGTAAACTTAACCTTTTCTTCACTTCATCAAACGATTTCTTTCATTTTTCAAAATTTCACTCCCATTTGCTTCTTAGATGTGATCAAAAGACTGGATATCCTCCGAGGAGAAGGCCTTTCCAGATTGTATTCGTGGTCTTCGAAGCGGTAATTACGCCTTTGAGCTTCTGTGTTTGTTTCCAGAGATAATACGATTTTCATAGATTTTTCTTCTACGTTTTTCATCAATCGTACACAAATTCAATTCATATATTGCAATCAATCGAGGAGTTACTTACGATTTCAGGCGGTATAGAAACGGATATGTATGGCAAGACCTATCAGACGACGATTTGATACATCCATCTCAAGGCCAAGAGTACATTCTCAAAGGATCGGAAATACAATTGCTAGAGGCGTCTTCGAGTTTCCGATCTTGTGAAGCATCATCGTCATTTTCGGAGTCGAAATTTTCTTCAGAGACGAACAATTCGAGCACGGATTCGAATGTTGCCGTCGGGGTGAGAAGGAACAATCAGTCGTGGAATTCGCTGGAAGATATTTGCCGGAACGTAGTGTACAAGGCGAGAATCTCCGGCGAAGGCGGGACGAACGCGGCGACGCAGACGGGCGAGAGGCGACGGAGATGGACGGACGGCGTAGCGGCGGAGGAATGCGGCGGAGAGGGATTTTCAAATTCTGGAGTTGGAAGAACGGAGAGCTTGACATCTGTTGATTGTGACGGAGCGACGGATGTGAGAGATCGGACGGCTGGGAAGAGTAACAGGTGGAAGGCATCAACGGTTCTGATGCAGTTGATCAAGTGTAACATCCAAAATTAA

mRNA sequence

ATGTCAAGTGAATGGCCAAGCAGAGGAAGCAGTCATTATCGTCCTGAACAATCCGAAACCAAAACCATGACAGAATTGAAAACAGAGCCTACAGAAATCATCCCTGTAATATACTACCTCACTCGCCATGGCCAACTCCAGCATCCTCATTTGCTGGAAGTTCCTCTTTCTTCTTCTCACGGACTCTTTCTCAGAGATGTGATCAAAAGACTGGATATCCTCCGAGGAGAAGGCCTTTCCAGATTGTATTCGTGGTCTTCGAAGCGGCGGTATAGAAACGGATATGTATGGCAAGACCTATCAGACGACGATTTGATACATCCATCTCAAGGCCAAGAGTACATTCTCAAAGGATCGGAAATACAATTGCTAGAGGCGTCTTCGAGTTTCCGATCTTGTGAAGCATCATCGTCATTTTCGGAGTCGAAATTTTCTTCAGAGACGAACAATTCGAGCACGGATTCGAATGTTGCCGTCGGGGTGAGAAGGAACAATCAGTCGTGGAATTCGCTGGAAGATATTTGCCGGAACGTAGTGTACAAGGCGAGAATCTCCGGCGAAGGCGGGACGAACGCGGCGACGCAGACGGGCGAGAGGCGACGGAGATGGACGGACGGCGTAGCGGCGGAGGAATGCGGCGGAGAGGGATTTTCAAATTCTGGAGTTGGAAGAACGGAGAGCTTGACATCTGTTGATTGTGACGGAGCGACGGATGTGAGAGATCGGACGGCTGGGAAGAGTAACAGGTGGAAGGCATCAACGGTTCTGATGCAGTTGATCAAGTGTAACATCCAAAATTAA

Coding sequence (CDS)

ATGTCAAGTGAATGGCCAAGCAGAGGAAGCAGTCATTATCGTCCTGAACAATCCGAAACCAAAACCATGACAGAATTGAAAACAGAGCCTACAGAAATCATCCCTGTAATATACTACCTCACTCGCCATGGCCAACTCCAGCATCCTCATTTGCTGGAAGTTCCTCTTTCTTCTTCTCACGGACTCTTTCTCAGAGATGTGATCAAAAGACTGGATATCCTCCGAGGAGAAGGCCTTTCCAGATTGTATTCGTGGTCTTCGAAGCGGCGGTATAGAAACGGATATGTATGGCAAGACCTATCAGACGACGATTTGATACATCCATCTCAAGGCCAAGAGTACATTCTCAAAGGATCGGAAATACAATTGCTAGAGGCGTCTTCGAGTTTCCGATCTTGTGAAGCATCATCGTCATTTTCGGAGTCGAAATTTTCTTCAGAGACGAACAATTCGAGCACGGATTCGAATGTTGCCGTCGGGGTGAGAAGGAACAATCAGTCGTGGAATTCGCTGGAAGATATTTGCCGGAACGTAGTGTACAAGGCGAGAATCTCCGGCGAAGGCGGGACGAACGCGGCGACGCAGACGGGCGAGAGGCGACGGAGATGGACGGACGGCGTAGCGGCGGAGGAATGCGGCGGAGAGGGATTTTCAAATTCTGGAGTTGGAAGAACGGAGAGCTTGACATCTGTTGATTGTGACGGAGCGACGGATGTGAGAGATCGGACGGCTGGGAAGAGTAACAGGTGGAAGGCATCAACGGTTCTGATGCAGTTGATCAAGTGTAACATCCAAAATTAA

Protein sequence

MSSEWPSRGSSHYRPEQSETKTMTELKTEPTEIIPVIYYLTRHGQLQHPHLLEVPLSSSHGLFLRDVIKRLDILRGEGLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSEIQLLEASSSFRSCEASSSFSESKFSSETNNSSTDSNVAVGVRRNNQSWNSLEDICRNVVYKARISGEGGTNAATQTGERRRRWTDGVAAEECGGEGFSNSGVGRTESLTSVDCDGATDVRDRTAGKSNRWKASTVLMQLIKCNIQN
BLAST of Cla004028 vs. Swiss-Prot
Match: UFC_ARATH (Protein UPSTREAM OF FLC OS=Arabidopsis thaliana GN=UFC PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.7e-23
Identity = 54/110 (49.09%), Postives = 72/110 (65.45%), Query Frame = 1

Query: 12  HYRPEQSETKTMTELKTEPTEIIPVIYYLTRHGQLQHPHLLEVPLSSSHGLFLRDVIKRL 71
           H   E+ E +  T  K      + V+YYLTR+G L+HPH +EV    +  L LRDV+ RL
Sbjct: 26  HQHDEELEEEVKT--KKPIFRRVQVVYYLTRNGHLEHPHFIEVISPVNQPLRLRDVMNRL 85

Query: 72  DILRGEGLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSEI 122
            ILRG+ ++  Y+WS KR YRNG+VW DL+++D+I+PS   EY+LKGSEI
Sbjct: 86  TILRGKCMTSQYAWSCKRSYRNGFVWNDLAENDVIYPSDCAEYVLKGSEI 133

BLAST of Cla004028 vs. TrEMBL
Match: A0A0A0KLM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180890 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 5.5e-127
Identity = 226/266 (84.96%), Postives = 241/266 (90.60%), Query Frame = 1

Query: 2   SSEWPSRGSSHYR-PEQSETKTMTELKTEPTEIIPVIYYLTRHGQLQHPHLLEVPLSSSH 61
           SSEWP RG+  Y   EQSETKTMTELKTEPTE IPVIYYLTRHGQLQHPHLLEVPLSSS 
Sbjct: 14  SSEWPIRGTILYHHSEQSETKTMTELKTEPTETIPVIYYLTRHGQLQHPHLLEVPLSSSQ 73

Query: 62  GLFLRDVIKRLDILRGEGLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSE 121
           GL L+DVIKRLDILRGEG SRLYSWSSKR+Y+NGYVWQDLSDDDLIHPSQG+EYILKGSE
Sbjct: 74  GLLLKDVIKRLDILRGEGFSRLYSWSSKRQYKNGYVWQDLSDDDLIHPSQGREYILKGSE 133

Query: 122 IQLLEASSSFRSCEASSSFSESKFSSETNNSSTDSNVAVGVRRNNQSWNSLEDICRNVVY 181
           +QLLE SSSFRSCE SSSFS+SKFSSETNNSSTDS V VGV ++NQSWNS+EDICRNVVY
Sbjct: 134 VQLLEGSSSFRSCETSSSFSDSKFSSETNNSSTDSKVGVGVNKSNQSWNSVEDICRNVVY 193

Query: 182 KARISGEGGTNAATQTGERRRRWTDGVAAEECGGEGFSNSGVGRTESLTSVDCDGATDVR 241
           KARISGEGG NA TQTGERRRRWTD VAAEECGGEG S SG+G+TE + SVDCDGA D+R
Sbjct: 194 KARISGEGGMNAGTQTGERRRRWTDSVAAEECGGEGVSKSGIGKTERMKSVDCDGAGDLR 253

Query: 242 DRTAGKSNRWKASTVLMQLIKCNIQN 267
           DRT  KSNRWKASTVLMQL+KCNIQN
Sbjct: 254 DRTGRKSNRWKASTVLMQLMKCNIQN 279

BLAST of Cla004028 vs. TrEMBL
Match: V7BA03_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G011100g PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.6e-52
Identity = 128/256 (50.00%), Postives = 171/256 (66.80%), Query Frame = 1

Query: 20  TKTMTELKTEPTEI-IPVIYYLTRHGQLQHPHLLEVPLSSSHG-LFLRDVIKRLDILRGE 79
           +K  TE K + TE+ +PVIYYL+R+GQL+HPHL+EVP+SS  G L ++DVI RL  LRG+
Sbjct: 11  SKICTEPKHQATELRVPVIYYLSRNGQLEHPHLMEVPISSPRGVLCVKDVIDRLSFLRGQ 70

Query: 80  GLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSEIQLLEASSSFRSCEASS 139
           G++ +YSWS+KR Y+NG+VWQDLS++DLI+PS G EY+LKG+  Q++EAS SFRSCE  S
Sbjct: 71  GMTNMYSWSTKRSYKNGFVWQDLSENDLIYPSSGHEYVLKGT--QMIEASLSFRSCETIS 130

Query: 140 SFSESKFSSETNNSSTDSNVAVGVRRNNQSWNSLEDICRNVVYKARISGE---GGTNAAT 199
           + S SK S+E NNSS D++    ++  +QS NS    C    YKA+   E    GTNA+T
Sbjct: 131 T-SSSKSSTEANNSSMDADSPATIKGRSQSLNS----CDYKFYKAKTCEEFAGKGTNAST 190

Query: 200 QTGERRRRWTDGVAAEEC-GGEG----FSNSGVGRTESLTSVDCDGATDVRDRTAGK--- 259
           QT E+RR        EEC G EG    FS+S  G  E   S++  G+ D+R++       
Sbjct: 191 QTEEKRRERIKREKVEECEGNEGSSSRFSSSSFGALEG--SLEGYGSADIRNQRVENERP 250

Query: 260 SNRWKASTVLMQLIKC 263
           S R KAS VLMQ I+C
Sbjct: 251 SGRIKASEVLMQFIRC 257

BLAST of Cla004028 vs. TrEMBL
Match: A0A061FU34_THECC (Domain of Uncharacterized protein function, putative OS=Theobroma cacao GN=TCM_042839 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.6e-49
Identity = 123/253 (48.62%), Postives = 161/253 (63.64%), Query Frame = 1

Query: 20  TKTMTELKTEPTEIIPVIYYLTRHGQLQHPHLLEVPLSSSHGLFLRDVIKRLDILRGEGL 79
           T    E K+     + V+YYL+R+GQL+HPH +EVPLSS  GLFL+DVI RL+ LRGEG+
Sbjct: 27  TMVWVESKSNKERKVSVVYYLSRNGQLEHPHFIEVPLSSPQGLFLKDVIIRLNSLRGEGM 86

Query: 80  SRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSEIQLLEASSSFRSCE-ASSS 139
           +  YSWSSKR Y+NGYVWQDLS +D I+PS G EYILKGS   LL+ S SFRS +  SS+
Sbjct: 87  ANRYSWSSKRSYKNGYVWQDLSKNDFIYPSHGHEYILKGS--LLLQTSLSFRSYKTVSST 146

Query: 140 FSESKFSSETNNSSTDSNVAVGVRRNNQSWNSLEDICRNVVYKARISGE---GGTNAATQ 199
            S SK SSET +S  DSN    +RR + SW+  +++  + +Y+AR S E    G N +TQ
Sbjct: 147 SSISKNSSETYSSGEDSNFPAKIRRKHHSWSEFKELDEHKIYEARTSREFSSKGNNVSTQ 206

Query: 200 TGER-RRRWTDGVAAEECGGEGFSNSGVGRTESLTSV-DC-DGATDVRDRTAGK---SNR 259
           T E  R+R   G  AEE   E    +    + S + V +C + + D+RD++      S R
Sbjct: 207 TDENARQRRVGGEEAEEHQRENGQQTPRPSSYSSSEVPECLNISADIRDQSVENDRPSGR 266

Query: 260 WKASTVLMQLIKC 263
            KAS VLMQLI C
Sbjct: 267 IKASAVLMQLIAC 277

BLAST of Cla004028 vs. TrEMBL
Match: A0A0S3SLE3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G012300 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 5.1e-48
Identity = 124/261 (47.51%), Postives = 164/261 (62.84%), Query Frame = 1

Query: 20  TKTMTELKTEPTEI-IPVIYYLTRHGQLQHPHLLEVPLSSSHG-LFLRDVIKRLDILRGE 79
           +K  TE K + TE+ +PVIYYL+R+GQL+HPHL++VP+SS  G L L+DVI RL  LRG+
Sbjct: 11  SKMWTEPKHQATELRVPVIYYLSRNGQLEHPHLMDVPISSPQGVLCLKDVIDRLSFLRGQ 70

Query: 80  GLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSEIQLLEASSSFRSCEASS 139
           G++ +YSWS+KR Y+NG+VWQDLS++D I+PS   EY+LKG+  Q++EAS SFRSCE  S
Sbjct: 71  GMTAMYSWSTKRSYKNGFVWQDLSENDFIYPSGSHEYVLKGT--QMIEASLSFRSCETIS 130

Query: 140 SFSESKFSSETNNSSTDSNVAVGVRRNNQSWNSLEDICRNVVYKARISGE---GGTNAAT 199
           + S SK S+E NNSS D++    V+  +QS+NS +       Y+A+   E     TNA+T
Sbjct: 131 T-SSSKSSTEANNSSMDADSPATVKGRSQSFNSSD----YKFYRAKTCEEFAGKATNAST 190

Query: 200 QTGERRRRWTDGVAAEECGG---------EG---FSNSGVGRTE-SLTSVDCDGATDVRD 259
           QT E+RR        EEC G         EG   FS+S  G  E SL   D     + R 
Sbjct: 191 QTEEKRRERIKWEKVEECKGTDDARVGENEGSLRFSSSSFGALEGSLKGYDSADIRNQRV 250

Query: 260 RTAGKSNRWKASTVLMQLIKC 263
                S R KAS VLMQ I+C
Sbjct: 251 ENERPSGRIKASEVLMQFIRC 264

BLAST of Cla004028 vs. TrEMBL
Match: I1LFC8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G290300 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.8e-46
Identity = 121/260 (46.54%), Postives = 158/260 (60.77%), Query Frame = 1

Query: 20  TKTMTELKTEPTEI-IPVIYYLTRHGQLQHPHLLEVPLSSSHG-LFLRDVIKRLDILRGE 79
           TK   E K + TE+ +PVIYYL+R+GQL+HPHL+EVP+SS  G L L+DVI RL  LRG+
Sbjct: 11  TKIWIEPKHQATEVKVPVIYYLSRNGQLEHPHLMEVPISSLQGVLCLKDVIDRLSFLRGQ 70

Query: 80  GLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSEIQLLEASSSFRSCEASS 139
           G++ +YSWS+KR Y+NGYVWQDLS++D I+PS G EY+LKG+  Q++EAS SFRSCE  S
Sbjct: 71  GMANMYSWSAKRSYKNGYVWQDLSENDFIYPSSGHEYVLKGT--QMIEASLSFRSCETIS 130

Query: 140 SFSESKFSSETNNSSTDSNVAVGVRRNNQSWNSLEDICRNVVYKARISGEGGTNAATQTG 199
           + S SK S+E  NSST ++    ++  +QS NS +    +       +G+  TNA+TQT 
Sbjct: 131 T-SSSKSSTEAINSSTGADSPATIKGRSQSLNSSDYKFYSAKTCEEFAGK-ATNASTQTE 190

Query: 200 ER-RRRWTDGVAAEECGGEG-------------FSNSGVGRTE-SLTSVDCDGATDVRDR 259
           E+ R R       EEC G G             FS S  G  E SL   +       R  
Sbjct: 191 EKHRERIKREEQVEECEGNGDARELGENEGSLPFSRSSFGTLEGSLEGFESADIRSQRVE 250

Query: 260 TAGKSNRWKASTVLMQLIKC 263
               S R KAS VLMQ I+C
Sbjct: 251 NERPSGRIKASEVLMQFIRC 266

BLAST of Cla004028 vs. NCBI nr
Match: gi|659123394|ref|XP_008461641.1| (PREDICTED: uncharacterized protein LOC103500195 [Cucumis melo])

HSP 1 Score: 464.5 bits (1194), Expect = 1.2e-127
Identity = 228/266 (85.71%), Postives = 245/266 (92.11%), Query Frame = 1

Query: 2   SSEWPSRGSSHYRP-EQSETKTMTELKTEPTEIIPVIYYLTRHGQLQHPHLLEVPLSSSH 61
           SSEWP+RG+  Y   +QSETKTMTELKTE +EIIPVIYYLTRHGQLQHPHLLEVPLSSS+
Sbjct: 14  SSEWPTRGTILYHHLQQSETKTMTELKTETSEIIPVIYYLTRHGQLQHPHLLEVPLSSSN 73

Query: 62  GLFLRDVIKRLDILRGEGLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSE 121
           GLFL+DVIKRLDILRGEG SRLYSWSSKR+Y+NGYVWQDLSDDDLIHPSQG+EYILKGSE
Sbjct: 74  GLFLKDVIKRLDILRGEGFSRLYSWSSKRQYKNGYVWQDLSDDDLIHPSQGREYILKGSE 133

Query: 122 IQLLEASSSFRSCEASSSFSESKFSSETNNSSTDSNVAVGVRRNNQSWNSLEDICRNVVY 181
           +QLLEASSSFRSCE SSSFSESKFSSETNNSSTDS VAV   R+NQSWNS+EDICRNVVY
Sbjct: 134 VQLLEASSSFRSCETSSSFSESKFSSETNNSSTDSKVAVAGNRSNQSWNSVEDICRNVVY 193

Query: 182 KARISGEGGTNAATQTGERRRRWTDGVAAEECGGEGFSNSGVGRTESLTSVDCDGATDVR 241
           KARISGEGGTNAATQTGERRRRWTD VAAEECGGEG SNSGVGR E + SVDCDGA D+R
Sbjct: 194 KARISGEGGTNAATQTGERRRRWTDSVAAEECGGEGVSNSGVGRRERMKSVDCDGAADLR 253

Query: 242 DRTAGKSNRWKASTVLMQLIKCNIQN 267
           DRT GK  RWKA+TV+MQL+KCNIQN
Sbjct: 254 DRTGGKCKRWKAATVVMQLMKCNIQN 279

BLAST of Cla004028 vs. NCBI nr
Match: gi|449459970|ref|XP_004147719.1| (PREDICTED: uncharacterized protein LOC101206550 [Cucumis sativus])

HSP 1 Score: 461.8 bits (1187), Expect = 7.9e-127
Identity = 226/266 (84.96%), Postives = 241/266 (90.60%), Query Frame = 1

Query: 2   SSEWPSRGSSHYR-PEQSETKTMTELKTEPTEIIPVIYYLTRHGQLQHPHLLEVPLSSSH 61
           SSEWP RG+  Y   EQSETKTMTELKTEPTE IPVIYYLTRHGQLQHPHLLEVPLSSS 
Sbjct: 14  SSEWPIRGTILYHHSEQSETKTMTELKTEPTETIPVIYYLTRHGQLQHPHLLEVPLSSSQ 73

Query: 62  GLFLRDVIKRLDILRGEGLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSE 121
           GL L+DVIKRLDILRGEG SRLYSWSSKR+Y+NGYVWQDLSDDDLIHPSQG+EYILKGSE
Sbjct: 74  GLLLKDVIKRLDILRGEGFSRLYSWSSKRQYKNGYVWQDLSDDDLIHPSQGREYILKGSE 133

Query: 122 IQLLEASSSFRSCEASSSFSESKFSSETNNSSTDSNVAVGVRRNNQSWNSLEDICRNVVY 181
           +QLLE SSSFRSCE SSSFS+SKFSSETNNSSTDS V VGV ++NQSWNS+EDICRNVVY
Sbjct: 134 VQLLEGSSSFRSCETSSSFSDSKFSSETNNSSTDSKVGVGVNKSNQSWNSVEDICRNVVY 193

Query: 182 KARISGEGGTNAATQTGERRRRWTDGVAAEECGGEGFSNSGVGRTESLTSVDCDGATDVR 241
           KARISGEGG NA TQTGERRRRWTD VAAEECGGEG S SG+G+TE + SVDCDGA D+R
Sbjct: 194 KARISGEGGMNAGTQTGERRRRWTDSVAAEECGGEGVSKSGIGKTERMKSVDCDGAGDLR 253

Query: 242 DRTAGKSNRWKASTVLMQLIKCNIQN 267
           DRT  KSNRWKASTVLMQL+KCNIQN
Sbjct: 254 DRTGRKSNRWKASTVLMQLMKCNIQN 279

BLAST of Cla004028 vs. NCBI nr
Match: gi|593594603|ref|XP_007142718.1| (hypothetical protein PHAVU_007G011100g [Phaseolus vulgaris])

HSP 1 Score: 213.8 bits (543), Expect = 3.7e-52
Identity = 128/256 (50.00%), Postives = 171/256 (66.80%), Query Frame = 1

Query: 20  TKTMTELKTEPTEI-IPVIYYLTRHGQLQHPHLLEVPLSSSHG-LFLRDVIKRLDILRGE 79
           +K  TE K + TE+ +PVIYYL+R+GQL+HPHL+EVP+SS  G L ++DVI RL  LRG+
Sbjct: 11  SKICTEPKHQATELRVPVIYYLSRNGQLEHPHLMEVPISSPRGVLCVKDVIDRLSFLRGQ 70

Query: 80  GLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSEIQLLEASSSFRSCEASS 139
           G++ +YSWS+KR Y+NG+VWQDLS++DLI+PS G EY+LKG+  Q++EAS SFRSCE  S
Sbjct: 71  GMTNMYSWSTKRSYKNGFVWQDLSENDLIYPSSGHEYVLKGT--QMIEASLSFRSCETIS 130

Query: 140 SFSESKFSSETNNSSTDSNVAVGVRRNNQSWNSLEDICRNVVYKARISGE---GGTNAAT 199
           + S SK S+E NNSS D++    ++  +QS NS    C    YKA+   E    GTNA+T
Sbjct: 131 T-SSSKSSTEANNSSMDADSPATIKGRSQSLNS----CDYKFYKAKTCEEFAGKGTNAST 190

Query: 200 QTGERRRRWTDGVAAEEC-GGEG----FSNSGVGRTESLTSVDCDGATDVRDRTAGK--- 259
           QT E+RR        EEC G EG    FS+S  G  E   S++  G+ D+R++       
Sbjct: 191 QTEEKRRERIKREKVEECEGNEGSSSRFSSSSFGALEG--SLEGYGSADIRNQRVENERP 250

Query: 260 SNRWKASTVLMQLIKC 263
           S R KAS VLMQ I+C
Sbjct: 251 SGRIKASEVLMQFIRC 257

BLAST of Cla004028 vs. NCBI nr
Match: gi|1009120509|ref|XP_015876960.1| (PREDICTED: protein UPSTREAM OF FLC-like [Ziziphus jujuba])

HSP 1 Score: 206.1 bits (523), Expect = 7.8e-50
Identity = 131/288 (45.49%), Postives = 178/288 (61.81%), Query Frame = 1

Query: 1   MSSEWPSRGSSHYRPEQSETKTMTELKTEPTEIIPVIYYLTRHGQLQHPHLLEVPLSSSH 60
           M  +W  R +++  P++++T   T+ KT+  + +PVIYYL+R+GQL+HPH +EV LSS  
Sbjct: 1   MPKKWQDRDNAN--PKRTKTLMETKPKTKADQKVPVIYYLSRNGQLEHPHFMEVLLSSPQ 60

Query: 61  GLFLRDVIKRLDILRGEGLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSE 120
           GL+L+DVI RL  LRG G+  +YSW+SKRRY+NG+VWQDLS++D I+P QG EYILKGS 
Sbjct: 61  GLYLKDVINRLSSLRGPGICSIYSWASKRRYKNGFVWQDLSENDFIYPCQGNEYILKGS- 120

Query: 121 IQLLEASSSFRS-----CEASSSFSESKFSSETNNSSTDSNVA--VGVRRNNQSWNSLED 180
            +LLE S SFRS       +SS  S   F  ETN+S  D + A    +RR NQSW+  +D
Sbjct: 121 -KLLETSQSFRSSYETPSSSSSISSAPAFFRETNSSCEDFSGASTTIIRRKNQSWSLFDD 180

Query: 181 ICRNVVYKARISGE---GGTNAATQTGERRRRWTDGVAAEECGGEGFSNSGVGRTE---- 240
           +    VYKA+ +GE     TNA+TQT E+    T+    +E  G+G     VG TE    
Sbjct: 181 LREYQVYKAKTTGELAGKSTNASTQTEEKAT--TNHGEVKEFEGDGV----VGLTEQSKE 240

Query: 241 --SLTSVDC-------DGATDVRDRTAGKS---NRWKASTVLMQLIKC 263
             S+ S  C       +G  +++D T   S    R KASTVLMQLI+C
Sbjct: 241 EASVLSNYCFGGLGSMEGYVEMQDGTVENSCGGERRKASTVLMQLIRC 278

BLAST of Cla004028 vs. NCBI nr
Match: gi|951023452|ref|XP_014513186.1| (PREDICTED: protein UPSTREAM OF FLC-like [Vigna radiata var. radiata])

HSP 1 Score: 203.8 bits (517), Expect = 3.9e-49
Identity = 124/262 (47.33%), Postives = 168/262 (64.12%), Query Frame = 1

Query: 20  TKTMTELKTEPTEI-IPVIYYLTRHGQLQHPHLLEVPLSSSHG-LFLRDVIKRLDILRGE 79
           +K  TE K +PTE+ +PVIYYL+R+GQL+HPHL+EVP+SS  G L L+DVI RL  LRG+
Sbjct: 11  SKMWTEPKHQPTELRVPVIYYLSRNGQLEHPHLMEVPISSPQGVLCLKDVIDRLSFLRGQ 70

Query: 80  GLSRLYSWSSKRRYRNGYVWQDLSDDDLIHPSQGQEYILKGSEIQLLEASSSFRSCEASS 139
           G++ +YSWS+KR Y+NG+VWQDLS++D I+PS   EY+LKG+  Q++EASSSFRSCE  S
Sbjct: 71  GMTAMYSWSTKRSYKNGFVWQDLSENDFIYPSGSHEYVLKGT--QMIEASSSFRSCETIS 130

Query: 140 SFSESKFSSETNNSSTDSNVAVGVRRNNQSWNSLEDICRNVVYKARISGE---GGTNAAT 199
           + S SK S+E NNSS D++    ++  +QS+NS +       Y+A+   E     TNA+T
Sbjct: 131 T-SSSKSSTEANNSSMDADSPATIKGRSQSFNSSD----YKFYRAKTCEEFAGKATNAST 190

Query: 200 QTGERRRRWTDGVAAEECGG-----EGFSNSGVGRTESLT------SVDCDGATDVRDRT 259
           QT E+RR        EEC G     E   N G  R  S +      S+   G+ D+R++ 
Sbjct: 191 QTEEKRRERIKWEKVEECEGTDDARESGENEGSLRLSSSSFGALEGSLKDYGSADIRNQR 250

Query: 260 AGK---SNRWKASTVLMQLIKC 263
                 S R KAS VLMQ I+C
Sbjct: 251 VENERPSGRIKASEVLMQFIRC 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
UFC_ARATH4.7e-2349.09Protein UPSTREAM OF FLC OS=Arabidopsis thaliana GN=UFC PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KLM4_CUCSA5.5e-12784.96Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180890 PE=4 SV=1[more]
V7BA03_PHAVU2.6e-5250.00Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G011100g PE=4 SV=1[more]
A0A061FU34_THECC4.6e-4948.62Domain of Uncharacterized protein function, putative OS=Theobroma cacao GN=TCM_0... [more]
A0A0S3SLE3_PHAAN5.1e-4847.51Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G012300 PE=... [more]
I1LFC8_SOYBN2.8e-4646.54Uncharacterized protein OS=Glycine max GN=GLYMA_10G290300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659123394|ref|XP_008461641.1|1.2e-12785.71PREDICTED: uncharacterized protein LOC103500195 [Cucumis melo][more]
gi|449459970|ref|XP_004147719.1|7.9e-12784.96PREDICTED: uncharacterized protein LOC101206550 [Cucumis sativus][more]
gi|593594603|ref|XP_007142718.1|3.7e-5250.00hypothetical protein PHAVU_007G011100g [Phaseolus vulgaris][more]
gi|1009120509|ref|XP_015876960.1|7.8e-5045.49PREDICTED: protein UPSTREAM OF FLC-like [Ziziphus jujuba][more]
gi|951023452|ref|XP_014513186.1|3.9e-4947.33PREDICTED: protein UPSTREAM OF FLC-like [Vigna radiata var. radiata][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010369DUF966
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009920 cell plate formation involved in plant-type cell wall biogenesis
cellular_component GO:0005575 cellular_component
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0003729 mRNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005488 binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU50164watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla004028Cla004028.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU50164WMU50164transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010369Protein of unknown function DUF966PFAMPF06136DUF966coord: 34..205
score: 5.8
NoneNo IPR availablePANTHERPTHR31083FAMILY NOT NAMEDcoord: 1..262
score: 1.2
NoneNo IPR availablePANTHERPTHR31083:SF4SUBFAMILY NOT NAMEDcoord: 1..262
score: 1.2

The following gene(s) are paralogous to this gene:

None