Cla003875 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla003875
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	SPla/RYanodine receptor (SPRY) domain-containing protein (AHRD V1 *--- F4HYD7_ARATH)
Location	Chr8 : 4239186 .. 4245784 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAATCACAGCAACATTAGCAACACCCTCAATAACAGCACTACTTCTACTTCTCCCCAAGATCTCGGATTGCACTTCTTGGAAATGGCTCGATTGGGTCTGCCTCGGGGGCTATGCGACATGGACGAGGACGAGGAGTCTCCCACTGAACTCAATACCATCAACAGTTCCGGAGGTTTCTTGTTGGTTACCACCGATAAGCTCTCTGTCAAGTATACGAATGTGAATCTTCACGGCCACGATGTCGGGGTTGTCCAAGCTAACAAGCCAGCTCCAGTTAAACGACTTGTCTACTACTTCGAGATTCATGTAAAGGATGCTGGGGCCAAAGGCCAGATTGCCATTGGCTTCACCACCGAGAGCTTCAAGATGCGAAGGCAGCCCGGGTGGGACACACTTTCTCTATCTCTCTTTCTTTCTTGATTCCTTTTTCGATTTTTCTTTGATTTTCTTGATTATGTATATTATTTCCTGTCACCAGGAAGTGTTACGAATGTGCCTTTTTATTGGAATTGATTGATAAATGGAATTGAATACAGTATCTGCAATCATCCAGTTAGTGCTTATCTTTATAATCCCTCAGTGGATGTAACTCAGTTTGGCTCAATCTTTTGCATTTTCCTGAGATATCCCTTCCCCGATTCTAAGCCTCAAAAGTACTCATATGCCCTGTCCTGTTAATTTGGACGAGTAGGTGGGAGCCTAATAGCTGTGGATATCATGGAGATGACGGACTACTTTATCGTGGACTAGGTAAGAAAGAACCTTTTGGTCCAACATATACATCTGGTGATACGGTTGGTGCCGGAATTAATTACGCCTCACAGGAATTCTTTTTCACGTAAGACATTTGCGCACTGTAATTGTTGTAAGTTTTTTTTTTTTTTTTTTTTTTAAAGGTTATCATCATGATACTTTATGATTCTTTCTGTCGATGTACTAGAAAAAATGGGATAGTAGTCGGAGCAGTAGAAAAGGACATGAAGGGTCCCTTGTTCCCTACCATTGCCGTTCACAGCCAAAACGAAGAGTATGCTCGTCATCAAACTTTTATCCCTTTGATACCTTGTTTTGCATATACTTTGTCTATTCTGATAACTTAATTAGGATTATATATGCGTTAGGGTTTTATAACATCACAATGGAGTTTTACTGGTGATGTAGTAAGTCCTGTCTCAAACTAGATAGATGTAGTTGGAACCAGGACGTAAAGTATCTGATGTTTCTTTAGCTTAACAAAAGGCTTTCATTGCTTTTGTTATTCCTTCAAAGTAATCCTTTACCAATGTTACTGGTGTGAAGTATCTGATAATTCTATGGCAAACTTTCCTGATTTTTAGGTGGTAACGTGCCCAAATTTGAGGTCCGTTCCCTTGGATTGAAAGCTTAACGTGTGAAAGCTCTTTATGTTTCGAGCTGCCATTAGGCACATGGAATCTTTTTGTGGAGTAGTTGGATGGTGCCAAATACCATGGTTGTAAAAAAAAATTCACTCAGCTTTTTCTTTTATCGATCAATAACCAAGCTTTCATTGAGAAAAAAATAAAGAAAAGAATACAAGGCCAGAAGAAAAACTAGAGCCACAAACAAGCAGAGGCTAATTAAAAGAAAGACCTCCAGTCAAGCAAGATAAAACTAAGCGGATAATTAAAAAAAGGCTTCATTATTGAAGCCCACAAAGAAACATGAAACTTGGCAAAGGACCAAACATCATAAGTAGTCTGCTCAAGCCCTCTAAAGACTCAATTGTTCCTCTCGCCCCATAGACCCCACAACACATTGTACACCCCACTTTTCGAAAAAACTTATCTTTCTCCCTAAAAGGAGTATGGAGAAGGAACTCATTGATCATCTAAATGAACTTGATCAAAACCAAACTCATCAAAGAAACAACTCCACACAACATATGCAAAATCACAACTCCTATGCAATGATCAAGGTCCTTAACTGCCCTCCCGCACCATGACTCCATCAAGGAAGACATCCTCTTTGACACCCAGTTTTAAGGTATTTTACCTTTCCATGGAGCACTTGCCAAATTAAAAGCTTAATCTTTTTGGGTTCTTTTTCATCCTCCACATCGCGACATAGACTGAATCTCTCAATGGAGAAGGGTTAACCAAACAAAGAAAGAAGGAATTACAAGAAAAGCCCTTCAAAGGACTGGGGCACCACAAGCGAAAGTCCCTTCTCCCAGACGAACACTAAAAATCCCCCAATGAAGAGTCCCCTGTTTTCCTATCAAATAATGAATGACAAAACCCAAAGTAGGGGTTGGCTGAGCGAAAACATTAGCCATTGAGACATTTTTCATCAAAGACAAATGGTATAGATGAGGAAGAGCAGAGTAGAGGGGGGTTATCTCCCAACCACCTATCTTCTCAAAAAAACCTAACCCTCTCATTCCCAACCAAGCAACAGATAGAAGTAAGGAAGCTCTCCTACAATACCAAGAAGTGCTACTAACCCATTCAAGGTCCATTCAAAAGTGAACAAACCATATTTACTTGCAATAACCTTATGCCATAGGGTGCCAAGTTCATGTTAAGAGTCATTTAACCCTTATTACAAGCAGGTTCCCTTTACCTAAGCTGTCAAAATCCATGGGATTTGTAACCTCTTCCTAGTTAACTGTGTGAGACTCACCGCCTTCCTCCACTCCTTCCTAGAGAAAGTCATTATTTTTTTAGAAGGAAACGAAGCTTTTCATCAAAATAATAAAAAGAAAGTTAAAATTTATTGATATATTGCTTTGTATCATGGGTACTACTGACTTGAGCATGTTTCATCTCTTCCCTATAATTTCATGCCATCAATGAAATTGTTTTTCATTAAAAAAACTTCATGGGTACTACCAACGTGAGCATAGGCCAAGGAATTCACAATCTTCTTTAGAAGTTGAGGTTCAAGTTCCCACATCCATAATTGCAATGCTATGTTTTAAAAGAACATAATGGGTATTGTATTTTCTTCGATGGAAAATAAAGTAATTTTATTAGAGGAGTTATGAAAAAAAAATTGGATAAAGAACTCAATCATAAGCTGCAGCCCATCCTAAATGTCCAGGGACCTGACAAGTTTCAAAACACATGACTTCTAGGTAAGTGTTTTTCAGATATTGAGGTCTTAGCCAATGGGACTGCCCTTTAAGGTCTGGAAGCACAATCTTACTATAAAAGGAGTAGATTTATATAATGGATTAGCCAAAAAACACTAGGAAGAGAACTGGATCTTAGCCTTCTCGAAACACTTCATGAAAAGGTTTCTCTTGTTAAAAAGGAAAAAAAATTTGGTCAGTGATACACACAAGTGAAAGAAATGCCTCAAACTTTATTAAAAGATGATCAAATGATACAATTGATGTCCCTTTATAGGGAGCTAGTCAGTTCTAACTAAGAAGAAGGTGACCGGTTAAGCAAGTAACCGGTTTACATTAAAATAAAACTATATCTTGCTATTGGAAACAAATACAACATATGTTCCTACATCAATTCCTTCTAAAAAATTAAACATGCCCTCGAGTTACTTAGCTAAAGAGAAACAAGCCAAGCAAACAAGCAATCCTTTTCTTCCTCTCCAGCAACACCCATCCTTGCCAGCCAAGCTACCTCTCTTGGTAGTCACCCCTCTTTTACACATTGGTCATGGAAGTAGTCAGTTGCAAGATCAATGGAATTTTCTTTTGCACTTAGTTCGAAGATGGTAATTTCGTTGTAGAGGATATGGAAGTTCGAAAAGCAATTTACTTATCGGAGACGCATATGCATTGGATGGTAAAGCAAATCTCAGACCTCCTCAATGGATCAAGTGTTCGTTTTTTCTTAAGGGAAGTGTGTGATGACTGGGGAGCTATGAGATTATCAAAATTCAAGAGTAATATGGGTTGGAATCTAAGATTCGTGGTTTGGCCAGCTACCGGAGGACGCTTCTTCATTCACGTACCAAAAGGGACAGCGCAACAAGGTTGGAATGAATTTTTGGAAATGATTATTAGCTTTAACCATCGAATTGGGTGCTCAAGAGACAAAACAACGATTGTTAGTTTTTTGGAAGATCTTTATCAAATCAAAATTAGTATTAACCCTCTGTTTGCTGATAAGGCTTTGATTAAAGTATCCCAAGGAAATTTAGAAAAGATCATTGAAATGCCTGGAAAATGGTTTGACTATCGTAAATTCCATCTTCTATTTGAAAAATGGAATTCAATTCAGCATAGTAGGCCTACTTGCATTAAAGGTTATGGTGGATGGTTGATAATAAGAAACCTACCGTTGGAATACTAGAGCAGAGCAACCTTTGAAGCTATTGGCTCCCACTTTGGAGGTTTAGAAGAAATAGCATTTGAAACTCTCAATCTTTTGAACGTGTTAGAAGCAAAAATCAAAGTCAAAAGAAATTTATGTGGTTTTATGCCTGCATTGGTTGAAAGGAAAAATGAACTGAGAGGTTCCATATTTTTAAATTTTTGGGAATGTTGAAGCCATGGAGGTACCTTCTTATGCACACAAGGATTTATTTTTTAAAGAGTTCAATAACCCAATCGATCAAAACTGTATAAATAAAGTTGCAGAAGATGAAGATGCTTGTGGTATGGTAGCAAACTGCATCAGATTAGGTCGTTTTGTGACCATCTCGCCGGAGAAGATACCGGAAAATTTTGAAATCGTTGAGCCGGTGCCAGAGCGAAAAAGTTTAATTCTGGTGTTAATGAAGTAGTTGAAAAGTTGGAAGTTATTAGGAGAGAGAAACTCATTGGCTGAAATTGTAGTTTCTCAAGCAGCCAAAAAAATTTGCTCAAAATTCTTTATTTAATAAGGACCCCAAGGAGTCGGCGTCCCTTGATCTCCCCTCGTTGGAAAAAGACTTCATTAATGCCTTGTGGGTAAGCATCGACGGGCAAAATTTCGTGCAAGCTCCAGTTGTTTCGGACATTCCTTTGTCCCCGACTTCAGCAAACTCACCGGAGAAGAAGATGAAAACTTTCCAAACTAATGTAAATGCAATGGAGGCTAACGAAAAGGCAGATTACTTGAGGAAAGAGAAGAATGATGGCTGTTCCCTGATTGGTCAGTTAAATCGTCGGAAAAGCAGAAGATTCCTAATCAGCCTAGTGTGAACGCAAGGGAGGGTAATGATAAGTCACTCTTAATGAGGAAAGAGAAGAAAGATGGCAGCTCCCCCTCGGAAACCACTTCTTGTCGAGGCTGTTGGCATCCCATTAGAAGAAACCGATGAAATAATTGAAGACATTGATCCCCCCAACAAGCTCCAGTCGGATAGAAGCCCAAAAGTCTGTCCATGTAATTGGTTAGGATTTAATTCTTCAGAGAAAACAAAGGGGCAGACGTCTCCTTCTTTGGACTACCCGAAATTAATAAAGCCTTTCCCTAAATATTTTTCAAGAAAAAAAAGTTCCAACGGTAAGGCTGAAGCAGCAATGTCCAACCCAGATTTCTTGGAACTTTGTAGCACCCGAGCCCAGATTCTACCCTTCAAGAACAAGGCAGTTCATCCCTCTCCTCAAAAAGTCCACTATCCTCTTTCTTGATTCTAATACTATATTTTTGAAAGATACTCGATGTAACTCAAGCACTACTAAATCAAGGAGCGAAGAGGATTCAAATATTACTACTAAATCAAGGAGTGAAGAGGATTCGAATATTGACTCAATAGTAAGTATTAGTAGTGAAGAATCAGACGAATTTGAGGAAGAAGATCAACACAAAAAATTAGTGCCACTAGACATTTTCGGGGAAGATCTTAATAACCTTTTTCGACCTGATGAAGGTTTGAGCAGTAAAGAAATTGGAATCTCGTGTTTCAGCCCTCCCAAGCAATCTGAAATTCCATCACACCTGAAATCTTTCATTGAAGAGTGTGGTCTAGTCTAAGGATAAACCATAATTCCTATCCAGAAAATTTTGTAAGCGGCTACTGATGAAGATCATCTTATGGAATAGATGAAGATCATCTTATGGAATACGAGGGGGCTAAAAGATCCATCAAAAAGTCTAACTCTATAAAATCTCCTCAAGAAGCACAACCCAAAATTGGTCTTAATACAAGAATAAAAATGTGATGAGTTTGCAATTTCATTCTTCAAATCCATGTAGAGTTCCAAAGATACTGGATGGGAGCTTGTCGAATCCTATGAAAAATCCGTTGATATTCTAGCATTGTGGGTCGAGAGCAAAATTACATTCACTGAAACTCTCAAAGGAGGATATTCTCTTTCTGTGAAATGCTTGAAGTTAGCCAAGACTGCTTGTTGGGTCACAAAAGTCTACGAATCAAATGATTACAAAGATAGAAGACATATATGGTCAAAACTTCAATCTCTATCAGTTTATTGCTTGGAACCAAGGTGCATTGGACGAGTTTGCAACATTACTCGCTCGGCTCGATTTCCCATTGGAATAGTCACAAAAGGAATGAAAAGAATCATCATCTTTATTGGCTCCGCGAACCTCATGGAAATTCCACTCTCAATTCAGAAGGTTTACTTGGTTGAGAGAAGGGGCTTAAGTGGCATGATCACTTATTGTACGGTTTTTTTATCAATAAGGAGTGGGATGAACTCTTTGAAAACACAATAG

mRNA sequence

ATGAACAATCACAGCAACATTAGCAACACCCTCAATAACAGCACTACTTCTACTTCTCCCCAAGATCTCGGATTGCACTTCTTGGAAATGGCTCGATTGGGTCTGCCTCGGGGGCTATGCGACATGGACGAGGACGAGGAGTCTCCCACTGAACTCAATACCATCAACAGTTCCGGAGGTTTCTTGTTGGTTACCACCGATAAGCTCTCTGTCAAGTATACGAATGTGAATCTTCACGGCCACGATGTCGGGGTTGTCCAAGCTAACAAGCCAGCTCCAGTTAAACGACTTGTCTACTACTTCGAGATTCATGTAAAGGATGCTGGGGCCAAAGGCCAGATTGCCATTGGCTTCACCACCGAGAGCTTCAAGATGCGAAGGCAGCCCGGAAAAAATGGGATAGTAGTCGGAGCAGTAGAAAAGGACATGAAGGGTCCCTTGTTCCCTACCATTGCCGTTCACAGCCAAAACGAAGAGTATGCTCCCATGGAGGTACCTTCTTATGCACACAAGGATTTATTTTTTAAAGAGTTCAATAACCCAATCGATCAAAACTGTATAAATAAAGTTGCAGAAGATGAAGATGCTTGTGGTATGGTAGCAAACTGCATCAGATTAGGTCGTTTTGTGACCATCTCGCCGGAGAAGATACCGGAAAATTTTGAAATCGTTGAGCCGAGTTCCAAAGATACTGGATGGGAGCTTGTCGAATCCTATGAAAAATCCGTTGATATTCTAGCATTGTGGGTCGAGAGCAAAATTACATTCACTGAAACTCTCAAAGGAGGATATTCTCTTTCTGTGAAATGCTTGAAGTTAGCCAAGACTGCTTGTTGGGTCACAAAAGTCTACGAATCAAATGATTACAAAGATAGAAGACATATATGGTCAAAACTTCAATCTCTATCAGTTTATTGCTTGGAACCAAGGTGCATTGGACGAGTTTGCAACATTACTCGCTCGGCTCGATTTCCCATTGGAATAGTCACAAAAGGAATGAAAAGAATCATCATCTTTATTGGCTCCGCGAACCTCATGGAAATTCCACTCTCAATTCAGAAGGTTTACTTGGTTGAGAGAAGGGGCTTAAGTGGCATGATCACTTATTGTACGGTTTTTTTATCAATAAGGAGTGGGATGAACTCTTTGAAAACACAATAG

Coding sequence (CDS)

ATGAACAATCACAGCAACATTAGCAACACCCTCAATAACAGCACTACTTCTACTTCTCCCCAAGATCTCGGATTGCACTTCTTGGAAATGGCTCGATTGGGTCTGCCTCGGGGGCTATGCGACATGGACGAGGACGAGGAGTCTCCCACTGAACTCAATACCATCAACAGTTCCGGAGGTTTCTTGTTGGTTACCACCGATAAGCTCTCTGTCAAGTATACGAATGTGAATCTTCACGGCCACGATGTCGGGGTTGTCCAAGCTAACAAGCCAGCTCCAGTTAAACGACTTGTCTACTACTTCGAGATTCATGTAAAGGATGCTGGGGCCAAAGGCCAGATTGCCATTGGCTTCACCACCGAGAGCTTCAAGATGCGAAGGCAGCCCGGAAAAAATGGGATAGTAGTCGGAGCAGTAGAAAAGGACATGAAGGGTCCCTTGTTCCCTACCATTGCCGTTCACAGCCAAAACGAAGAGTATGCTCCCATGGAGGTACCTTCTTATGCACACAAGGATTTATTTTTTAAAGAGTTCAATAACCCAATCGATCAAAACTGTATAAATAAAGTTGCAGAAGATGAAGATGCTTGTGGTATGGTAGCAAACTGCATCAGATTAGGTCGTTTTGTGACCATCTCGCCGGAGAAGATACCGGAAAATTTTGAAATCGTTGAGCCGAGTTCCAAAGATACTGGATGGGAGCTTGTCGAATCCTATGAAAAATCCGTTGATATTCTAGCATTGTGGGTCGAGAGCAAAATTACATTCACTGAAACTCTCAAAGGAGGATATTCTCTTTCTGTGAAATGCTTGAAGTTAGCCAAGACTGCTTGTTGGGTCACAAAAGTCTACGAATCAAATGATTACAAAGATAGAAGACATATATGGTCAAAACTTCAATCTCTATCAGTTTATTGCTTGGAACCAAGGTGCATTGGACGAGTTTGCAACATTACTCGCTCGGCTCGATTTCCCATTGGAATAGTCACAAAAGGAATGAAAAGAATCATCATCTTTATTGGCTCCGCGAACCTCATGGAAATTCCACTCTCAATTCAGAAGGTTTACTTGGTTGAGAGAAGGGGCTTAAGTGGCATGATCACTTATTGTACGGTTTTTTTATCAATAAGGAGTGGGATGAACTCTTTGAAAACACAATAG

Protein sequence

MNNHSNISNTLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGGFLLVTTDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTTESFKMRRQPGKNGIVVGAVEKDMKGPLFPTIAVHSQNEEYAPMEVPSYAHKDLFFKEFNNPIDQNCINKVAEDEDACGMVANCIRLGRFVTISPEKIPENFEIVEPSSKDTGWELVESYEKSVDILALWVESKITFTETLKGGYSLSVKCLKLAKTACWVTKVYESNDYKDRRHIWSKLQSLSVYCLEPRCIGRVCNITRSARFPIGIVTKGMKRIIIFIGSANLMEIPLSIQKVYLVERRGLSGMITYCTVFLSIRSGMNSLKTQ

Homology

[Close]

BLAST of Cla003875 vs. TrEMBL
Match: A0A0A0KW89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G651700 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 6.0e-66
Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 1


Query: 1   MNNHSNISNTLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISN+LNN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSLNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPG 131
           ESFKMRRQPG
Sbjct: 121 ESFKMRRQPG 130

[Close]

BLAST of Cla003875 vs. TrEMBL
Match: A0A0A0KW89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G651700 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 1


Query: 131 KNGIVVGAVEKDMKGPLFPTIAVHSQNEE 160
           KNGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 180 KNGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

HSP 2 Score: 195.3 bits (495), Expect = 1.4e-46
Identity = 94/124 (75.81%), Postives = 110/124 (88.71%), Query Frame = 1


Query: 7   ISNTLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGGFLLVTT 66
           +S T N+  +++S  DLG +FLE +RLG  RG CDMDEDEE+PTELNT+NSSGGFL+++ 
Sbjct: 1   MSTTTNDVNSNSSGGDLGRYFLERSRLGSARGPCDMDEDEEAPTELNTLNSSGGFLVMSP 60

Query: 67  DKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTTESFKMR 126
           DKLSVKYT+VNLHGHDVGVVQAN+PAPVKRLVYYFEI VKDAG KGQIAIGFT+E+FKMR
Sbjct: 61  DKLSVKYTSVNLHGHDVGVVQANRPAPVKRLVYYFEIFVKDAGTKGQIAIGFTSENFKMR 120

Query: 127 RQPG 131
           RQPG
Sbjct: 121 RQPG 124

[Close]

BLAST of Cla003875 vs. TrEMBL
Match: W9SD80_9ROSA (Ran-binding protein 10 OS=Morus notabilis GN=L484_025454 PE=4 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 2.3e-01
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 1


Query: 131 KNGIVVGAVEKDMKGPLFPTIAVHSQNEE 160
           KNG VVG   K++K  LFPTIAVHSQNEE
Sbjct: 174 KNGAVVGTAYKELKVSLFPTIAVHSQNEE 202

HSP 2 Score: 194.9 bits (494), Expect = 1.8e-46
Identity = 97/118 (82.20%), Postives = 104/118 (88.14%), Query Frame = 1


Query: 13  NSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGGFLLVTTDKLSVK 72
           NST   S +DLGL FLE +RLG  R   DMDEDEE+PTELNTINSSGGFL+V+ DKLS K
Sbjct: 6   NSTNGHSDRDLGLWFLEQSRLGSARVPTDMDEDEEAPTELNTINSSGGFLVVSPDKLSAK 65

Query: 73  YTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTTESFKMRRQPG 131
           YTNVNLHGHDVGVVQANKPAPVKRLVYYFEI+VKDAG KGQIAIGFT+ESFKMRRQPG
Sbjct: 66  YTNVNLHGHDVGVVQANKPAPVKRLVYYFEIYVKDAGTKGQIAIGFTSESFKMRRQPG 123

[Close]

BLAST of Cla003875 vs. TrEMBL
Match: M5XYJ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005466mg PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-04
Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 1


Query: 131 KNGIVVGAVEKDMKGPLFPTIAVHSQNEE 160
           KNG VVG V KDMKGPLFPTIAVHSQNEE
Sbjct: 173 KNGAVVGTVPKDMKGPLFPTIAVHSQNEE 201

HSP 2 Score: 188.7 bits (478), Expect = 1.3e-44
Identity = 109/197 (55.33%), Postives = 132/197 (67.01%), Query Frame = 1


Query: 2   NNHSNISNTLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDED-EESPTELNTINSSGG 61
           +N+    N  +NS +S +  DLGL+FLE+ARLG  +   +M+ED EE+P ELNTINSSGG
Sbjct: 11  SNNGESKNGTSNSLSSVN-HDLGLYFLELARLGSAKAPTEMEEDEEEAPKELNTINSSGG 70

Query: 62  FLLVTTDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 121
           FL V TDKLSVKYT+VNLHGHDVGVVQANKPAPVKRL+YYFEI+VKDAGAKGQIAIGFT 
Sbjct: 71  FLFVATDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLLYYFEIYVKDAGAKGQIAIGFTQ 130

Query: 122 ESFKMRRQPGKNGIVVGAVEKDMKGPLFPTIAVHSQNEEYAPMEVP--------SYAHKD 181
           ESFKMRRQPG      G    D  G L+     H + E + P            +YA ++
Sbjct: 131 ESFKMRRQPGWEANSFGYHGDD--GFLY---RGHGKGEAFGPTYTTGDTVGGGINYASQE 190

Query: 182 LFFKEFNNPIDQNCINK 190
            FF +    +   C+ K
Sbjct: 191 FFFTKNGTIVGTVCMVK 201

[Close]

BLAST of Cla003875 vs. TrEMBL
Match: A0A061FK54_THECC (SPla/RYanodine receptor domain-containing protein isoform 3 OS=Theobroma cacao GN=TCM_036425 PE=4 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 4.0e-01
Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 1


Query: 131 KNGIVVGAV--EKDMKGPLFPTIAVHSQNEE 160
           KNG +VG V   K++KGPLFPT+AVHS NEE
Sbjct: 189 KNGTIVGTVCMVKEIKGPLFPTVAVHSLNEE 219

HSP 2 Score: 188.7 bits (478), Expect = 1.3e-44
Identity = 109/197 (55.33%), Postives = 132/197 (67.01%), Query Frame = 1


Query: 2   NNHSNISNTLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDED-EESPTELNTINSSGG 61
           +N+    N  +NS +S +  DLGL+FLE+ARLG  +   +M+ED EE+P ELNTINSSGG
Sbjct: 11  SNNGESKNGTSNSLSSVN-HDLGLYFLELARLGSAKAPTEMEEDEEEAPKELNTINSSGG 70

Query: 62  FLLVTTDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 121
           FL V TDKLSVKYT+VNLHGHDVGVVQANKPAPVKRL+YYFEI+VKDAGAKGQIAIGFT 
Sbjct: 71  FLFVATDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLLYYFEIYVKDAGAKGQIAIGFTQ 130

Query: 122 ESFKMRRQPGKNGIVVGAVEKDMKGPLFPTIAVHSQNEEYAPMEVP--------SYAHKD 181
           ESFKMRRQPG      G    D  G L+     H + E + P            +YA ++
Sbjct: 131 ESFKMRRQPGWEANSFGYHGDD--GFLY---RGHGKGEAFGPTYTTGDTVGGGINYASQE 190

Query: 182 LFFKEFNNPIDQNCINK 190
            FF +    +   C+ K
Sbjct: 191 FFFTKNGTIVGTVCMVK 201

[Close]

BLAST of Cla003875 vs. NCBI nr
Match: gi|778708086|ref|XP_011656119.1| (PREDICTED: ran-binding protein 10 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 8.6e-66
Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 1


Query: 1   MNNHSNISNTLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISN+LNN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSLNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPG 131
           ESFKMRRQPG
Sbjct: 121 ESFKMRRQPG 130

[Close]

BLAST of Cla003875 vs. NCBI nr
Match: gi|778708086|ref|XP_011656119.1| (PREDICTED: ran-binding protein 10 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 2.6e-06
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 1


Query: 131 KNGIVVGAVEKDMKGPLFPTIAVHSQNEE 160
           KNGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 180 KNGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

HSP 2 Score: 258.5 bits (659), Expect = 1.9e-65
Identity = 125/130 (96.15%), Postives = 129/130 (99.23%), Query Frame = 1


Query: 1   MNNHSNISNTLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISN++NN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSVNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPG 131
           ESFKMRRQPG
Sbjct: 121 ESFKMRRQPG 130

[Close]

BLAST of Cla003875 vs. NCBI nr
Match: gi|659119465|ref|XP_008459672.1| (PREDICTED: ran-binding protein 9 isoform X2 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 2.6e-06
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 1


Query: 131 KNGIVVGAVEKDMKGPLFPTIAVHSQNEE 160
           KNGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 180 KNGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

HSP 2 Score: 258.5 bits (659), Expect = 1.9e-65
Identity = 125/130 (96.15%), Postives = 129/130 (99.23%), Query Frame = 1


Query: 1   MNNHSNISNTLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGG 60
           MNNHSNISN++NN+TTSTSPQDLGLHFLEMARLGLPRGLCDMDEDE+SPTELNTINSSGG
Sbjct: 1   MNNHSNISNSVNNTTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEDSPTELNTINSSGG 60

Query: 61  FLLVTTDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120
           FLLVT DKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT
Sbjct: 61  FLLVTPDKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTT 120

Query: 121 ESFKMRRQPG 131
           ESFKMRRQPG
Sbjct: 121 ESFKMRRQPG 130

[Close]

BLAST of Cla003875 vs. NCBI nr
Match: gi|659119463|ref|XP_008459671.1| (PREDICTED: ran-binding protein 10 isoform X1 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 2.6e-06
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 1


Query: 131 KNGIVVGAVEKDMKGPLFPTIAVHSQNEE 160
           KNGIVVGAVEKDMKGPLFPTIAVHSQNEE
Sbjct: 180 KNGIVVGAVEKDMKGPLFPTIAVHSQNEE 208

HSP 2 Score: 195.3 bits (495), Expect = 2.0e-46
Identity = 94/124 (75.81%), Postives = 110/124 (88.71%), Query Frame = 1


Query: 7   ISNTLNNSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGGFLLVTT 66
           +S T N+  +++S  DLG +FLE +RLG  RG CDMDEDEE+PTELNT+NSSGGFL+++ 
Sbjct: 1   MSTTTNDVNSNSSGGDLGRYFLERSRLGSARGPCDMDEDEEAPTELNTLNSSGGFLVMSP 60

Query: 67  DKLSVKYTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTTESFKMR 126
           DKLSVKYT+VNLHGHDVGVVQAN+PAPVKRLVYYFEI VKDAG KGQIAIGFT+E+FKMR
Sbjct: 61  DKLSVKYTSVNLHGHDVGVVQANRPAPVKRLVYYFEIFVKDAGTKGQIAIGFTSENFKMR 120

Query: 127 RQPG 131
           RQPG
Sbjct: 121 RQPG 124

[Close]

BLAST of Cla003875 vs. NCBI nr
Match: gi|703129937|ref|XP_010104485.1| (Ran-binding protein 10 [Morus notabilis])

HSP 1 Score: 45.1 bits (105), Expect = 3.3e-01
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 1


Query: 131 KNGIVVGAVEKDMKGPLFPTIAVHSQNEE 160
           KNG VVG   K++K  LFPTIAVHSQNEE
Sbjct: 174 KNGAVVGTAYKELKVSLFPTIAVHSQNEE 202

HSP 2 Score: 194.9 bits (494), Expect = 2.6e-46
Identity = 97/118 (82.20%), Postives = 104/118 (88.14%), Query Frame = 1


Query: 13  NSTTSTSPQDLGLHFLEMARLGLPRGLCDMDEDEESPTELNTINSSGGFLLVTTDKLSVK 72
           NST   S +DLGL FLE +RLG  R   DMDEDEE+PTELNTINSSGGFL+V+ DKLS K
Sbjct: 6   NSTNGHSDRDLGLWFLEQSRLGSARVPTDMDEDEEAPTELNTINSSGGFLVVSPDKLSAK 65

Query: 73  YTNVNLHGHDVGVVQANKPAPVKRLVYYFEIHVKDAGAKGQIAIGFTTESFKMRRQPG 131
           YTNVNLHGHDVGVVQANKPAPVKRLVYYFEI+VKDAG KGQIAIGFT+ESFKMRRQPG
Sbjct: 66  YTNVNLHGHDVGVVQANKPAPVKRLVYYFEIYVKDAGTKGQIAIGFTSESFKMRRQPG 123

The following BLAST results are available for this feature:

BLAST of Cla003875 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW89_CUCSA	6.0e-66	96.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G651700 PE=4 SV=1	[more]
A0A0A0KW89_CUCSA	1.8e-06	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G651700 PE=4 SV=1	[more]
W9SD80_9ROSA	2.3e-01	72.41	Ran-binding protein 10 OS=Morus notabilis GN=L484_025454 PE=4 SV=1	[more]
M5XYJ8_PRUPE	1.0e-04	89.66	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005466mg PE=4 SV=1	[more]
A0A061FK54_THECC	4.0e-01	67.74	SPla/RYanodine receptor domain-containing protein isoform 3 OS=Theobroma cacao G...	[more]

BLAST of Cla003875 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778708086\|ref\|XP_011656119.1\|	8.6e-66	96.92	PREDICTED: ran-binding protein 10 [Cucumis sativus]	[more]
gi\|778708086\|ref\|XP_011656119.1\|	2.6e-06	100.00	PREDICTED: ran-binding protein 10 [Cucumis sativus]	[more]
gi\|659119465\|ref\|XP_008459672.1\|	2.6e-06	100.00	PREDICTED: ran-binding protein 9 isoform X2 [Cucumis melo]	[more]
gi\|659119463\|ref\|XP_008459671.1\|	2.6e-06	100.00	PREDICTED: ran-binding protein 10 isoform X1 [Cucumis melo]	[more]
gi\|703129937\|ref\|XP_010104485.1\|	3.3e-01	72.41	Ran-binding protein 10 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU08553	watermelon unigene v2 vs TrEMBL	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla003875	Cla003875.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU08553	WMU08553	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12864	RAN BINDING PROTEIN 9-RELATED	coord: 41..130 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla003875	Cla97C08G144740	Watermelon (97103) v2	wmwmbB104
Cla003875	Csa5G651700	Cucumber (Chinese Long) v2	cuwmB381
Cla003875	MELO3C022219	Melon (DHL92) v3.5.1	mewmB010
Cla003875	CSPI05G31420	Wild cucumber (PI 183967)	cpiwmB386
Cla003875	Cucsa.061620	Cucumber (Gy14) v1	cgywmB051
Cla003875	CmaCh09G012260	Cucurbita maxima (Rimu)	cmawmB016
Cla003875	CmoCh09G013260	Cucurbita moschata (Rifu)	cmowmB015
Cla003875	Lsi08G000230	Bottle gourd (USVL1VR-Ls)	lsiwmB469
Cla003875	Cp4.1LG06g10150	Cucurbita pepo (Zucchini)	cpewmB762
Cla003875	CsGy5G030710	Cucumber (Gy14) v2	cgybwmB353
Cla003875	MELO3C022219.2	Melon (DHL92) v3.6.1	medwmB008
Cla003875	CsaV3_5G040450	Cucumber (Chinese Long) v3	cucwmB403

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla003875	Watermelon (Charleston Gray)	wcgwmB404
Cla003875	Wax gourd	wgowmB123