Cla003778 (gene) Watermelon (97103) v1

Overview
NameCla003778
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPolyribonucleotide nucleotidyltransferase (AHRD V1 *--- PNP_METFK); contains Interpro domain(s) IPR003029 Ribosomal protein S1, RNA binding domain
LocationChr8 : 10732430 .. 10739113 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTTGGCTTTGATGGCTCACCAATGCACAGGGTTGAGATGTGAGCCTCTCTTTTCAATTTCCTCGCGTCTCTCCAAGCCACTTGATCGGAGCCATATGCAGAATAAGGCGGCCCGTTCATTCCCCGTTTTGGCTGCACTAATATCGAGCCCTATTCCCACTCCTCAGACCACAGAACGTTTCAAGCTCAAGCAGACCTTCATAGATGCGGCTGATCGCTGCCGTAACTCTCCCATGGAAGGTGTCTCCTTCACTCTCCAACACTTCCTTGCGTCTCTTGAGAAATACGACTTCGATCCTCAATTGGGAGCCAAGGTTTTTTCCGCTTCCATCCTCTTGTGATTTTCTGGATTTTATTTTCTTCTCGATTGCGCCAGAATTGGTGTTTTGATCTTTTCATGGTTTGTTAGTTCAGTGGTATAGTGGGAAAGGATTTTGTGATTGCTTATGGGAATTGGGAAGTATGTAAATATTTGAAGTTTGATTGCTGAAATCTCGTGGATGTGTTTATTTAGTCTTTGGATTTTAAGCAGTTTCTAATAAGCATTAAGTATCAATTTTGTGTCCTTCATCAATTCACCACTTCTGCCATTAAACGCCCAAAATTAGCCTATTACATAACTTTTTAGATAGTATAATCAGCATATCACATAAGCTTTAACGAGTCGGAGTTATTGGTAGGAGACCTATTAGGCATAAAATTGAATGTTGAAATACTTTTTTTTAGTATCCGTGGGTGTCTAATCAAAGATTAAATCCTAAGTAGGTGACCACAATGATTGAACCCATAATCTCTTAGCTTCTTTTTTAAGACATTTTTTTAAGTACAAAACTTTTGAAAGTTTAGGACCAAACTTATTTGATAGTCTTTATGTTCCAATCTATAATGTTATCTAGCATATCAAGGTGAAATCCTACCTTTTCGTTTGAAGAAAATGGGGTTGAAATTTGAACAGTGTGTGTTTACAGGTGAAAGGTACTGTGGTCTATTCAGAAGCTAATGGAGCATTTGTGGAGATTGCTGCCAAGTCACCTGCATACTTGCCCTTGCAGGAGACTTGCATTCATAGAATAAAACGTGTAGAAGAAGCAGGAATATATCCTGGTTTAAGAGAGGAGTTTGTTATTATAGGTGAGAATGAAGATGATAGCTTGACTTTGAGCTTGAGGCCCATCCAATATGAACTTGCTTGGGAAAGGTGCAGACAGCTTCAAGCAGAGGATGTTGTTGTCAAGGGTAAGGTGGGCATTTCCACACCAATTTTCCATTCTTTTATTTGTCCGCTTCATACCCTTCGGGCATGTTTGATAGGGGCCTACATCACTTCCAAAGCAACCATTAAAAAATACTTCTATATCGAAACAGTTCTAAAAGTATATAACCAACATTAAATTACTATCTTTAAAAATGCTTATTCTAAAATCACTCTCAAACATATCCTAGATCTCTTGTTATTTCCAAGACTGTTCATGTGTAGCCATTTTATGATCAAATATTCAGGTGGTTGATGCGAACAAAGGGGGAGTTTTGGTAGTTGTGGAAGGCCTAAAAGGATTTGTTCCTTTCTCAGAGATATTAATGGTATTTTCTATAGGCTCTTTGAAGACTTTCATCTTGATCAATGCTAAATATACTCTTCTTTCTTTTCTGTTTGTATTCCTTTCCATTCTGGTCTCGAGGAATACCGATGTAAATATTTTTGAATCATTGGTATTCTTGTAGTCTTCTTGATGTTAACTATGTACTGCTAATTTACATTATACCTCTTTTATCGTTTTTTTTTTTTTTGGTGCAATTATTTCAGATATCAACTGCTGAAGAGCTTATCAACAAGGAGCTTCCTCTGAAATTTCTGGTGGTTAATGAGGAACAAACGAGGGTTGTTCTCAGTAACCGTAAGGTCATGGCTGACAGCAACGCAGAGCTTGCAATTGGATCGGTGGTCACTGGAACAGTTCTAAAACTTAAAGAGTATGGTGCCTTTGTTGACATCGGTGGAATCCATGGTCTTCTTCACATCAGTGAGATAAGTCATGATCGCATACGAGATGTTGCAGCAGTTCTTAAGCCGGGAGACGTTCTCAAGGTAGTTTTCGACGGCCTTCAAGTGATTGGTTATTGGGCTCTTACACTCATGATACCAACTATACAGTGAATTCCTTTGGCATAGGTCATGATATTGAACATTGATCGTGAAAAAGGCCATATTCGTCTTTCTACCAAGAAGCTAGAGCCTAATACCGGGGACATGATTTGCAATCCAGGGCTTGTTTTTGAAAAGGTATTCTCTTTGCTAGCTGGAGTTATCTTTTCCTGTCATTTGTGATGCCTTTTTTTGTTCCCTTTGTTGCCCAATAAATACATTTATTGTATTTCAGATACTATGTTTCTGTTAAGATGAATGTCATTATTTAAAGTGCAACTTTGAACATGGGTAGGATTGACTGTCCAATCATCAAATTACTATTTATATTTTATTTAATAATTTTGATGAAACTTTATTATTTTCCAATTTTATCTTTTTTAAGACATATTAAGTAGGGGCAATTTTGTCTTTTTACTATGATGCATTAGGTTTTTTTTTCTTTTTTCTTTCTTTTCGGGGAGTCTATTTAAAGCTTTGCTATTAGGTTGTTTGAAGTGAAGTTTTACAATAAATTGAGTGGCTTTGTGCTTCTTTAAAGATTAGCCTGGAGAGCTTCTTGAATTCGCAGTTCATGTGTTGAGTTGCAAGTCAAGAACATTCAATTGGAATTGATCATCCTATCTTGTGGAGTGTTCGAATCTTGGGTCAAGGAACTTGTTTTTTTGTCTTGAGAGCTTTGATCTTAAGACAATCTGTGTCTAATCCAATCTTTAGGGTTGAAATTGAGTTGATTTGGGGGTTTTAGTGATTTTGATTGAGAATTAGGGTTCTCATCCCAAAAGGGTTTCTAATTCTAATTCGCTAGGGTTTTCATATTAAGGATCTTGTGGCTTGCTAGGATAGGATAGAGGAATCTATTGAGAATAATGTCTCTAATTCTCCTTCACCTTTTGTAGCATGTTTCTTTGTTCTTGTTTTCAGCATTTTAAAGCCACTATATCAGATTTTTTTTATAGAGTTTTGGTGTGGTTATTTCATGAATGTTGAAGCAAAACATACAGTCATATGAAAGAAGGTTTGTATTCCCATTTAAAAATTAATAGTAGATATTTGGATAATAAAAAGAGATCTTGGAGTTTCTGGTTGTTCCTACTGGAGCGCACTTGTTAGGAACTTTCTATATTTCTGTTTTACTTTGCTTTTCTAATATGCAGTTCGTTTCCTAATTTCCTATTAACCAAAAAAAAAGAAAAAAAAAAAAGAAAAAAAAACGGTAAGAAGAAGAAAAAGAGCAAGGAGTAAAATTGTTTATGTGGGTTTGTTTCTATTGACAGGCTGAGGAAATGGCACATAGATTTAGGCAAAGATTAGCTCAAGCAGAGGCATTGGCACGTGCAGACTTGCTTAGTTTTCAGCCTGAGGTATTTTACAGCCATTTTATCCTTGAGATTTTTGAACTTTACCCTTAGAATGAAGAAAAAAAATTATGAAGAATTAAACTAAAATTTACGTGCTGGAGTTCTGAATCGTAACGTGGAAAAGTACTTCAGTTGCCAGTACACACATATGTCAGTTATAGAAGTCTAATTATTGTTAGTTTATTAGTTATGTAGTACTGGCTGCATGATTGAGGGGTGTAGTTTATATGACTGTTTTAGCAGGTTGACATACTTTGGAGGGAAATTATTTTAAATAGAAAAAATATCAAACTATTTACAAATAATTTTTCTATATTTGTAAATAGTTTGACTCATTTTGCTATATTTGAAAACAACCCTACTTTTTAGTTTAAACACCTTTTAATAACAAATTTGTTTGATTACACTCCATTTGAAACCGATTCTGCTATTCATGAGGATTACTAAGATTGTGTTTAGAAGTATTTCTGAACTAATTAAATTTTTTTTTTTTTTTGATATCTTTGAGTAACCGAACCAATTTACGTGCACCTCAACTAATTTCACGAGACAACCTGCCTGACCTTACAACATTTGGGTATCAAGGAAACTCGTAGGAAATTAATTCCAAGGTAGGTGGCCACCATGGATTGAACCCTTGACTTTTTAGTCATTTATTCTTTTTACCACTAGGCCAATCCATGATGGTTTAAAAGTGTTTATAATTGAGCAAAAATAACACTTATCAATTGTTATAAAATGTTTTTCCATATAGTTAATAGTGTTTATCCAAATATTGAATTTTGCCAAGGAGTATATGAGTAAGATTAGTAGGATATTAATAAGGGGATTGTGGGTAAGTAACTTGTAGTTTCTTGTTTAAGTATTACTAATCCCTAAACCCAGAAAGACCCAACAAATACTCAAAACAGGGGAATATCCTCCCTGTGGTCTTTGGTTTAAGATATTATAGAAATGTGTTAGGATACCTCCTAACAAGAACACACTAAAAAACACACAGAAAACTCAAGAACATTAAAATATGGAAATATATGAAAATATAAGGAAATATGCTATAATGTCATAAGAACAAGTAACAAGGTAACTGCTAGCGTTTCGAGAGGGCTAGACTCCCAAATTCCCAATTAAGGAAATCTCACAAAATTCTTGACTCCTTGCTCCTATCCCATTCCCTCTATTTATAACTAAAATCCCTAACAAACTTACTATCCCATTACTAATATGCCTCTTCCAATAACCATACTAATATTCTCTTAATAATCCTATTATTTATCTAACTAGGGGCGTAACAAAATGATAGATAATAGTAGTTCTCAAGATAAAAAAATCTCTCGGCTGATTCAAGATTGCCGTTCTCTCCTCCTCTCACAGCTCCAAAAAACTGCACAAAAAGCGAGGGATGCCTCCAAAGCTCTCCATAAACCTCTCAACTGAATTTTTACCCTCCTCCTACATTGTCCCCCTGTGATGTTCCCTTTTACCCTTCCTTTCGTATGTGCGGTTGATTTGGGGTCTAACATCTTGTTATAAATAAAGAGGAGTTTTGTCATCTTGGGGTGGATCATTTTAGTGAGAATTTCCATTATGGGACTTTGGAGAGAGCCCTTTCAAAAAGCTAGTATATTGCAATTTTGATATTGCAATGTAGTTATCTTTTAGTGTTTACTTGTATTTTCGTATTTGGGTACCTAACAATATTTCTCAGGCTGCATTATATTGAATTTGAACTTTAACCTTACCTGTTTTCACAATCATTCAGGGCAGATTAACTTTGAACAGTGATGGAATATTGGATCCGGCTACCCCAGAGTTGGGGGCTAAAGAATGAAGTCTCAACGAAGCTCTAAATGCATGGTCATGCCTACACGTTAATGCACGTATTCGATGTTGCATTATCCAAATAGTTAACAAGAAAATAACGTCAAAGACTGAAATTACATCATTTTTCTAATGTAGGTAGATATTTTGAAAATTTAGGGATAAAAATGATTTTCTTAAAGAAGTTTGGGATTATGTAGATGTTATAGAAGTTCAGGGATCAAAATATAATAATGTTGAAAGTTGAGGGATGAAATTAAAATTTATATATGCTTATGTTGATTCATCTATTTAAGTTGTAACATTGAATGGGTTTTTATATATATATATATAATTAAGTTGTCCAAAATACGCATTTGGTCTTTGAGGTTTGGAGTTGGCATCTATATGGTCTATGAGGTTTCAAAAAAGGATACTTATGGTTCTTGAGGTTTGGAAAAAAAAGATGTTGCAGACTAAATTCAACTTATGTGACAATTTTTAATGAATTGGCTTTTTTATTTTATTTTGTTGGGTGAGTTTCTCCCTCCCTGCCACCATCCTTGGAATGATGCAAATTGAAGGTATGTACTTTTTTTTCTTTCTTTTGTTGAAATTGAGGAAAAAGTGAGTGAGATTGTGATTTGTGTTGATGTGAACTGAGAAATAAGATTCAGAGTTTCCTGAAATTACAAACATGGTATCCAACCATGACACATTGCAGAGAGATTTTGTTCTTTCTAACTTCAATTTGGACTTTTATTGAAATATTGTATTTAGTAAAAATAATTAGAAAAATATTGTAGTTTGGAAACTATTTAGGAAAATATGGTAGTTTGGAGGAGAGAGAAGATGGGATAGTGGAGAGAGAAGATGGGATAGTGGAGAGAGAAAAAGGTCGAGACCTCAACCTTCGACCAAGGCAAAAGTCGAGACCTCAACTCTCGACCAAAGCAATCCTTCGACCAACGCAAGGCCTACCTTCTACTAATGCATGGCCTACTTTGACCAACGCAAGACCTATTTCGTCCAACGCAAGGAGGCCTCAACTTTTGACCAACGCAAGGCTACCTTCGACCAACGCAAGGCCTACTTCGACCAACGCAAGGCCTACCTTCGACCAACGCATGGCGTACTTCAACCAACGCAAGGAGGCCTCAACTTTCGACCAACGCAAGGTCGAGGCCTCAACCTTTGACCACTGTAGACCCACGGGTGGAAACTTTTATAGAGATTCCGTTCGCCACAGGTCTCGTTGCGTCGTCGCAGAGAATCCGCTGCAGGTCCCGTCGCGTCGTCAAAGAGAATCCGCCGCAGGTCTCGTCACATCGTCGCAGAGATTCCTTGTCGTCGTTGCGGCTTCCGTCGCCCGTGACTAA

mRNA sequence

ATGCCTTTGGCTTTGATGGCTCACCAATGCACAGGGTTGAGATGTGAGCCTCTCTTTTCAATTTCCTCGCGTCTCTCCAAGCCACTTGATCGGAGCCATATGCAGAATAAGGCGGCCCGTTCATTCCCCGTTTTGGCTGCACTAATATCGAGCCCTATTCCCACTCCTCAGACCACAGAACGTTTCAAGCTCAAGCAGACCTTCATAGATGCGGCTGATCGCTGCCGTAACTCTCCCATGGAAGGTGTCTCCTTCACTCTCCAACACTTCCTTGCGTCTCTTGAGAAATACGACTTCGATCCTCAATTGGGAGCCAAGGTGAAAGGTACTGTGGTCTATTCAGAAGCTAATGGAGCATTTGTGGAGATTGCTGCCAAGTCACCTGCATACTTGCCCTTGCAGGAGACTTGCATTCATAGAATAAAACGTGTAGAAGAAGCAGGAATATATCCTGGTTTAAGAGAGGAGTTTGTTATTATAGGTGAGAATGAAGATGATAGCTTGACTTTGAGCTTGAGGCCCATCCAATATGAACTTGCTTGGGAAAGGTGCAGACAGCTTCAAGCAGAGGATGTTGTTGTCAAGGGTAAGGTGGTTGATGCGAACAAAGGGGGAGTTTTGGTAGTTGTGGAAGGCCTAAAAGGATTTGTTCCTTTCTCAGAGATATTAATGATATCAACTGCTGAAGAGCTTATCAACAAGGAGCTTCCTCTGAAATTTCTGGTGGTTAATGAGGAACAAACGAGGGTTGTTCTCAGTAACCGTAAGGTCATGGCTGACAGCAACGCAGAGCTTGCAATTGGATCGGTGGTCACTGGAACAGTTCTAAAACTTAAAGAGTATGGTGCCTTTGTTGACATCGGTGGAATCCATGGTCTTCTTCACATCAGTGAGATAAGTCATGATCGCATACGAGATGTTGCAGCAGTTCTTAAGCCGGGAGACGTTCTCAAGGTCATGATATTGAACATTGATCGTGAAAAAGGCCATATTCGTCTTTCTACCAAGAAGCTAGAGCCTAATACCGGGGACATGATTTGCAATCCAGGGCTTGTTTTTGAAAAGGCTGAGGAAATGGCACATAGATTTAGGCAAAGATTAGCTCAAGCAGAGGCATTGGCACGTGCAGACTTGCTTAGTTTTCAGCCTGAGGGCAGATTAACTTTGAACAGTGATGGAATATTGGATCCGGCTACCCCAGATTTCTCCCTCCCTGCCACCATCCTTGGAATGATGCAAATTGAAGGAAAATATGGTAGTTTGGAGGAGAGAGAAGATGGGATAGTGGAGAGAGAAGATGGGATAGTGGAGAGAGAAAAAGGTCGAGACCTCAACCTTCGACCAAGGCAAAAGTCGAGACCTCAACTCTCGACCAAAGCAATCCTTCGACCAACGCAAGGCCTACCTTCTACTAATGCATGGCCTACTTTGACCAACGCAAGACCTATTTCGTCCAACGCAAGGAGGCCTCAACTTTTGACCAACGCAAGGCTACCTTCGACCAACGCAAGGCCTACTTCGACCAACGCAAGGCCTACCTTCGACCAACGCATGGCGTACTTCAACCAACGCAAGGAGGCCTCAACTTTCGACCAACGCAAGGTCGAGGCCTCAACCTTTGACCACTGTAGACCCACGGGTGGAAACTTTTATAGAGATTCCGTTCGCCACAGGTCTCGTTGCGTCGTCGCAGAGAATCCGCTGCAGGTCCCGTCGCGTCGTCAAAGAGAATCCGCCGCAGGTCTCGTCACATCGTCGCAGAGATTCCTTGTCGTCGTTGCGGCTTCCGTCGCCCGTGACTAA

Coding sequence (CDS)

ATGCCTTTGGCTTTGATGGCTCACCAATGCACAGGGTTGAGATGTGAGCCTCTCTTTTCAATTTCCTCGCGTCTCTCCAAGCCACTTGATCGGAGCCATATGCAGAATAAGGCGGCCCGTTCATTCCCCGTTTTGGCTGCACTAATATCGAGCCCTATTCCCACTCCTCAGACCACAGAACGTTTCAAGCTCAAGCAGACCTTCATAGATGCGGCTGATCGCTGCCGTAACTCTCCCATGGAAGGTGTCTCCTTCACTCTCCAACACTTCCTTGCGTCTCTTGAGAAATACGACTTCGATCCTCAATTGGGAGCCAAGGTGAAAGGTACTGTGGTCTATTCAGAAGCTAATGGAGCATTTGTGGAGATTGCTGCCAAGTCACCTGCATACTTGCCCTTGCAGGAGACTTGCATTCATAGAATAAAACGTGTAGAAGAAGCAGGAATATATCCTGGTTTAAGAGAGGAGTTTGTTATTATAGGTGAGAATGAAGATGATAGCTTGACTTTGAGCTTGAGGCCCATCCAATATGAACTTGCTTGGGAAAGGTGCAGACAGCTTCAAGCAGAGGATGTTGTTGTCAAGGGTAAGGTGGTTGATGCGAACAAAGGGGGAGTTTTGGTAGTTGTGGAAGGCCTAAAAGGATTTGTTCCTTTCTCAGAGATATTAATGATATCAACTGCTGAAGAGCTTATCAACAAGGAGCTTCCTCTGAAATTTCTGGTGGTTAATGAGGAACAAACGAGGGTTGTTCTCAGTAACCGTAAGGTCATGGCTGACAGCAACGCAGAGCTTGCAATTGGATCGGTGGTCACTGGAACAGTTCTAAAACTTAAAGAGTATGGTGCCTTTGTTGACATCGGTGGAATCCATGGTCTTCTTCACATCAGTGAGATAAGTCATGATCGCATACGAGATGTTGCAGCAGTTCTTAAGCCGGGAGACGTTCTCAAGGTCATGATATTGAACATTGATCGTGAAAAAGGCCATATTCGTCTTTCTACCAAGAAGCTAGAGCCTAATACCGGGGACATGATTTGCAATCCAGGGCTTGTTTTTGAAAAGGCTGAGGAAATGGCACATAGATTTAGGCAAAGATTAGCTCAAGCAGAGGCATTGGCACGTGCAGACTTGCTTAGTTTTCAGCCTGAGGGCAGATTAACTTTGAACAGTGATGGAATATTGGATCCGGCTACCCCAGATTTCTCCCTCCCTGCCACCATCCTTGGAATGATGCAAATTGAAGGAAAATATGGTAGTTTGGAGGAGAGAGAAGATGGGATAGTGGAGAGAGAAGATGGGATAGTGGAGAGAGAAAAAGGTCGAGACCTCAACCTTCGACCAAGGCAAAAGTCGAGACCTCAACTCTCGACCAAAGCAATCCTTCGACCAACGCAAGGCCTACCTTCTACTAATGCATGGCCTACTTTGACCAACGCAAGACCTATTTCGTCCAACGCAAGGAGGCCTCAACTTTTGACCAACGCAAGGCTACCTTCGACCAACGCAAGGCCTACTTCGACCAACGCAAGGCCTACCTTCGACCAACGCATGGCGTACTTCAACCAACGCAAGGAGGCCTCAACTTTCGACCAACGCAAGGTCGAGGCCTCAACCTTTGACCACTGTAGACCCACGGGTGGAAACTTTTATAGAGATTCCGTTCGCCACAGGTCTCGTTGCGTCGTCGCAGAGAATCCGCTGCAGGTCCCGTCGCGTCGTCAAAGAGAATCCGCCGCAGGTCTCGTCACATCGTCGCAGAGATTCCTTGTCGTCGTTGCGGCTTCCGTCGCCCGTGACTAA

Protein sequence

MPLALMAHQCTGLRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISSPIPTPQTTERFKLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVEIAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENEDDSLTLSLRPIQYELAWERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFLVVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISHDRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAHRFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDPATPDFSLPATILGMMQIEGKYGSLEEREDGIVEREDGIVEREKGRDLNLRPRQKSRPQLSTKAILRPTQGLPSTNAWPTLTNARPISSNARRPQLLTNARLPSTNARPTSTNARPTFDQRMAYFNQRKEASTFDQRKVEASTFDHCRPTGGNFYRDSVRHRSRCVVAENPLQVPSRRQRESAAGLVTSSQRFLVVVAASVARD
Homology
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BLAST of Cla003778 vs. Swiss-Prot
Match: RR1_SPIOL (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 3.6e-143
Identity = 272/406 (67.00%), Postives = 320/406 (78.82%), Query Frame = 1 

Query: 3   LALMAHQCTG-LRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISSPIPTPQTTER 62
           +A +A Q  G LRC PL +  S LSKP    H      R  P+++A+  S     QT ER
Sbjct: 1   MASLAQQLAGGLRCPPLSN--SNLSKPFSPKHTLKP--RFSPIVSAVAVS---NAQTRER 60

Query: 63  FKLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFV 122
            KLKQ F DA +RCRN+PMEGVSFT+  F  +L+KYDF+ ++G++VKGTV  ++ANGA V
Sbjct: 61  QKLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALV 120

Query: 123 EIAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENE-DDSLTLSLRPIQYELA 182
           +I AKS AYLPL E CI+RIK VEEAGI PG+REEFVIIGENE DDSL LSLR IQYELA
Sbjct: 121 DITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELA 180

Query: 183 WERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKF 242
           WERCRQLQAEDVVVKGK+V ANKGGV+ +VEGL+GFVPFS+I   S+AEEL+ KE+PLKF
Sbjct: 181 WERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKF 240

Query: 243 LVVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEIS 302
           + V+EEQ+R+V+SNRK MADS A+L IGSVVTGTV  LK YGAF+DIGGI+GLLH+S+IS
Sbjct: 241 VEVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS 300

Query: 303 HDRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMA 362
           HDR+ D+A VL+PGD LKVMIL+ DRE+G + LSTKKLEP  GDMI NP LVFEKAEEMA
Sbjct: 301 HDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMA 360

Query: 363 HRFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDPATPDFSLPA 407
             FRQR+AQAEA+ARAD+L FQPE  LTL+SDGIL P T D  LPA
Sbjct: 361 QTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSD--LPA 397

[Close]
BLAST of Cla003778 vs. Swiss-Prot
Match: RPS1_ARATH (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana GN=RPS1 PE=1 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 1.7e-140
Identity = 259/410 (63.17%), Postives = 322/410 (78.54%), Query Frame = 1 

Query: 3   LALMAHQCTGLRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISSPIPTPQTTERF 62
           +A +A Q +GLRC PL S SSRLS+   ++  QNK+A   P + A ++  + + QT ER 
Sbjct: 1   MASLAQQFSGLRCSPLSS-SSRLSRRASKNFPQNKSASVSPTIVAAVA--MSSGQTKERL 60

Query: 63  KLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVE 122
           +LK+ F DA +RCR SPMEGV+FT+  F A++E+YDF+ ++G +VKGTV  ++ANGA V+
Sbjct: 61  ELKKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVD 120

Query: 123 IAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENE-DDSLTLSLRPIQYELAW 182
           I+AKS AYL +++ CIHRIK VEEAGI PG+ EEFVIIGENE DDSL LSLR IQYELAW
Sbjct: 121 ISAKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAW 180

Query: 183 ERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFL 242
           ERCRQLQAEDV+VK KV+ ANKGG++ +VEGL+GFVPFS+I   + AEEL+ KE+PLKF+
Sbjct: 181 ERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFV 240

Query: 243 VVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISH 302
            V+EEQT++VLSNRK +ADS A+L IGSVV G V  LK YGAF+DIGGI+GLLH+S+ISH
Sbjct: 241 EVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISH 300

Query: 303 DRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAH 362
           DR+ D+A VL+PGD LKVMIL+ DR++G + LSTKKLEP  GDMI NP LVFEKAEEMA 
Sbjct: 301 DRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360

Query: 363 RFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDP---ATPDFSLPATI 409
            FRQR+AQAEA+ARAD+L FQPE  LTL+SDGIL P     PD  +  T+
Sbjct: 361 TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTV 407

[Close]
BLAST of Cla003778 vs. Swiss-Prot
Match: RS1_SYNP6 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4)

HSP 1 Score: 276.2 bits (705), Expect = 8.6e-73
Identity = 146/297 (49.16%), Postives = 197/297 (66.33%), Query Frame = 1 

Query: 79  PMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVEIAAKSPAYLPLQETCI 138
           P   + FT + F A L++YD+    G  V GTV   E  GA ++I AK+ A+LP+QE  I
Sbjct: 7   PAVDIGFTHEDFAALLDQYDYHFNPGDTVVGTVFNLEPRGALIDIGAKTAAFLPVQEMSI 66

Query: 139 HRIKRVEEAGIYPGLREEFVIIGENEDDSLTLSLRPIQYELAWERCRQLQAEDVVVKGKV 198
           +R++  EE      +RE F++  ENED  LTLS+R I+Y  AWER RQLQ ED  V+ +V
Sbjct: 67  NRVESPEEVLQPSEMREFFILSDENEDGQLTLSIRRIEYMRAWERVRQLQTEDATVRSEV 126

Query: 199 VDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFLVVNEEQTRVVLSNRKVM 258
              N+GG LV +EGL+GF+P S I      E+L+ +ELPLKFL V+E++ R+VLS+R+ +
Sbjct: 127 FATNRGGALVRIEGLRGFIPGSHISTRKAKEDLVGEELPLKFLEVDEDRNRLVLSHRRAL 186

Query: 259 ADSNA-ELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISHDRIRDVAAVLKPGDVL 318
            +     L +G VV G V  +K YGAF+DIGG+ GLLHISEISHD I    +V    D +
Sbjct: 187 VERKMNRLEVGEVVVGAVRGIKPYGAFIDIGGVSGLLHISEISHDHIETPHSVFNVNDEV 246

Query: 319 KVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAHRFRQRL-AQAEAL 374
           KVMI+++D E+G I LSTK+LEP  GDM+ NP +V+EKAEEMA ++R++L  QAE L
Sbjct: 247 KVMIIDLDAERGRISLSTKQLEPEPGDMVRNPEVVYEKAEEMAAQYREKLKQQAEGL 303

[Close]
BLAST of Cla003778 vs. Swiss-Prot
Match: RS1A_SYNY3 (30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rps1A PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.9e-70
Identity = 144/293 (49.15%), Postives = 192/293 (65.53%), Query Frame = 1 

Query: 83  VSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVEIAAKSPAYLPLQETCIHRIK 142
           + FTL+ F A L+KYD+    G  V GTV   E+ GA ++I AK+ AY+P+QE  I+R+ 
Sbjct: 10  IGFTLEDFAALLDKYDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVD 69

Query: 143 RVEEAGIYPGLREEFVIIGENEDDSLTLSLRPIQYELAWERCRQLQAEDVVVKGKVVDAN 202
             EE       RE F++  ENED  LTLS+R I+Y  AWER RQLQAED  V+  V   N
Sbjct: 70  DPEEVLQPNETREFFILTDENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFATN 129

Query: 203 KGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFLVVNEEQTRVVLSNRKVMADSN 262
           +GG LV +EGL+GF+P S I      E+L+ ++LPLKFL V+EE+ R+VLS+R+ + +  
Sbjct: 130 RGGALVRIEGLRGFIPGSHISAREAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVERK 189

Query: 263 AE-LAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISHDRIRDVAAVLKPGDVLKVMI 322
              L +  VV G+V  +K YGAF+DIGG+ GLLHISEISHD I    +V    D +KVMI
Sbjct: 190 MNGLEVAQVVVGSVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEIKVMI 249

Query: 323 LNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAHRFRQ-RLAQAEAL 374
           +++D E+G I LSTK+LEP  G M+ +  LV E A+EMA  FRQ RLA+A+ +
Sbjct: 250 IDLDAERGRISLSTKQLEPEPGAMLKDRDLVNEMADEMAEIFRQKRLAEAQGI 302

[Close]
BLAST of Cla003778 vs. Swiss-Prot
Match: RS1_SYNE7 (30S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942) GN=rpsA PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.6e-42
Identity = 105/292 (35.96%), Postives = 160/292 (54.79%), Query Frame = 1 

Query: 78  SPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVEIAAKSPAYLPLQETC 137
           SP    + +   F  +LE    D Q G  V+G V     +GA+++I  K+PA+LP +E  
Sbjct: 2   SPSAANTPSYDDFALALEAQSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAA 61

Query: 138 IHRIKRVEEAGIYPGLREEFVII-GENEDDSLTLSLRPIQYELAWERCRQLQAEDVVVKG 197
           +H +  +E A +      EF++I  +NED  +T+SLR +  E AW R  +LQ     V+ 
Sbjct: 62  LHAVLDLE-AHLPKDEELEFLVIRDQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQV 121

Query: 198 KVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFLVVNEEQTRVVLSNRK 257
           KV  +NKGGV   +EGL+ F+P S +      + L  K L + FL VN    ++VLS R+
Sbjct: 122 KVTGSNKGGVTADLEGLRAFIPRSHLNEKEDLDSLKGKTLTVAFLEVNRADKKLVLSERQ 181

Query: 258 VMADSNA-ELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISHDRIRDVAAVLKPGD 317
               +   E+ +G ++ G V  LK +G FVD+GG   LL I++IS   + DV A+ K GD
Sbjct: 182 AARTALVREIEVGQLINGKVTGLKPFGVFVDLGGATALLPINQISQKFVADVGAIFKIGD 241

Query: 318 VLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAHRFRQRL 368
            ++ +++ ID  KG I LSTK LE + G+++ N   +   A + A R R++L
Sbjct: 242 PIQALVVAIDNTKGRISLSTKVLENHPGEILENVAELQASAADRAERARKQL 292

[Close]
BLAST of Cla003778 vs. TrEMBL
Match: A0A0A0L5E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G168960 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.1e-148
Identity = 279/400 (69.75%), Postives = 323/400 (80.75%), Query Frame = 1 

Query: 3   LALMAHQCTGLRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISSPIPTPQTTERF 62
           +A MA Q TGLRC PL S  SRLSKP    H  NK+ RS PV AA+IS PIP+PQT ERF
Sbjct: 1   MASMAQQFTGLRCAPLSS--SRLSKPFSSKHFLNKS-RSLPVQAAVISGPIPSPQTRERF 60

Query: 63  KLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVE 122
           KLK+ F +A +RCRN+P+EG+SFTL+ F A+LEKYDFD +LG KVKGTV  ++ NGA V+
Sbjct: 61  KLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVD 120

Query: 123 IAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENE-DDSLTLSLRPIQYELAW 182
           I AKS AYLPLQE CIHRIK VEEAG++PGLREEFVIIGENE DDSL LSLR IQY+LAW
Sbjct: 121 ITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAW 180

Query: 183 ERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFL 242
           ERCRQLQAEDVVVKGKVVDANKGGV+ VVEGL+GFVPFS+I  +      +  +L + ++
Sbjct: 181 ERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTVMLIFHFLPPQLSIGYI 240

Query: 243 VVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISH 302
               EQ+R+VLSNRK MADS A+L IGSVVTGTV  LK YGAF+DIGGI+GLLH+S+ISH
Sbjct: 241 ----EQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISH 300

Query: 303 DRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAH 362
           DRI D+A VL+PGD LKVMIL+ DRE+G + LSTKKLEP  GDMI NP LVFEKAEEMA 
Sbjct: 301 DRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360

Query: 363 RFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDPATPD 402
            FRQR+AQAEALARAD+L FQPE  LTL +DGIL P TP+
Sbjct: 361 TFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPE 393

[Close]
BLAST of Cla003778 vs. TrEMBL
Match: D7SYG9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00450 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 6.1e-142
Identity = 270/414 (65.22%), Postives = 323/414 (78.02%), Query Frame = 1 

Query: 3   LALMAHQCTGLRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISS-PIPTPQTTER 62
           +A +A Q TGLRC P+ S  SRLSKP      Q       P    ++S+  I   QT ER
Sbjct: 1   MACLAQQFTGLRCPPISS--SRLSKPFSPKQPQK------PSFVRIVSAVAISNAQTKER 60

Query: 63  FKLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFV 122
            KLK+ F DA +RCR +P EGVSF+   F ++L+KYDF+ ++G KVKGTV  ++ NGA V
Sbjct: 61  LKLKEMFEDAYERCRTAPTEGVSFSADDFYSALDKYDFNSEIGTKVKGTVFCTDTNGALV 120

Query: 123 EIAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENE-DDSLTLSLRPIQYELA 182
           +I AKS AYLP+ E CIH+IK VEEAGI PG+REEFVIIGENE DDSL LSLR IQY+LA
Sbjct: 121 DITAKSSAYLPVYEACIHKIKHVEEAGIVPGVREEFVIIGENEADDSLILSLRSIQYDLA 180

Query: 183 WERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKF 242
           WERCRQLQAEDVVVKGKVV ANKGGV+ +VEGL+GFVPFS+I   +TAEEL++KELP+KF
Sbjct: 181 WERCRQLQAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISSKTTAEELLDKELPVKF 240

Query: 243 LVVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEIS 302
           + V+EEQ+R+VLSNRK MADS A+L IGSVVTGTV  LK YGAF+DIGGI+GLLH+S+IS
Sbjct: 241 VEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS 300

Query: 303 HDRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMA 362
           HDR+ D+A VL+PGD+LKVMIL+ DRE+G + LSTKKLEP  GDMI NP LVFEKAEEMA
Sbjct: 301 HDRVSDIATVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMA 360

Query: 363 HRFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDPATPDFSLPATILGMMQI 415
             FRQR+AQAEA+ARAD+L FQPE  LTLNSDGIL P + D  LPA  L +  +
Sbjct: 361 QTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPVSAD--LPAEGLDLSDV 404

[Close]
BLAST of Cla003778 vs. TrEMBL
Match: M5XQU6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006438mg PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.0e-141
Identity = 271/400 (67.75%), Postives = 318/400 (79.50%), Query Frame = 1 

Query: 3   LALMAHQCTGLRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISSPIPTPQTTERF 62
           +A +A Q TGLRC PL +  SRLSKP      QNK A   PV++A+    I   QT ER 
Sbjct: 1   MASLAQQFTGLRCPPLST--SRLSKP-SVFPKQNKMAGLLPVVSAVA---ISNAQTKERL 60

Query: 63  KLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVE 122
           KLK+ F DA +RCR +PMEGVSF L  F ++LEKYDF+ ++G KVKGTV   +  GA V+
Sbjct: 61  KLKELFEDAHERCRTAPMEGVSFNLDSFYSALEKYDFNSEIGTKVKGTVFNIDNYGALVD 120

Query: 123 IAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENE-DDSLTLSLRPIQYELAW 182
           I AKS AYLP+QE CIH+IK VEE GI PG+REEFVIIGENE DDSL LSL+ IQY+LAW
Sbjct: 121 ITAKSSAYLPVQEACIHKIKSVEEVGIVPGVREEFVIIGENEADDSLILSLKSIQYDLAW 180

Query: 183 ERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFL 242
           ERCRQLQAEDVVVKGKVV ANKGGV+ VVEGL+GFVPFS+I   STAEEL++KE+PLKF+
Sbjct: 181 ERCRQLQAEDVVVKGKVVGANKGGVVAVVEGLRGFVPFSQISTKSTAEELLDKEIPLKFV 240

Query: 243 VVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISH 302
            V+EEQ+R+VLSNRK MAD+ A+L IGSVV GTV  LK YGAF+DIGGI+GLLH+S+ISH
Sbjct: 241 EVDEEQSRLVLSNRKAMADNQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISH 300

Query: 303 DRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAH 362
           DR+ D+A VL+PGD LKVMIL+ DRE+G + LSTKKLEP  GDMI NP LVFEKAEEMA 
Sbjct: 301 DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360

Query: 363 RFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDPATPD 402
            FRQR+AQAEA+ARAD+L FQPE  LTL+SDGIL P T D
Sbjct: 361 TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSD 394

[Close]
BLAST of Cla003778 vs. TrEMBL
Match: E9P1K6_MUSAC (Ribosomal protein S4 OS=Musa acuminata AAA Group GN=RPS4 PE=2 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 3.0e-141
Identity = 270/408 (66.18%), Postives = 318/408 (77.94%), Query Frame = 1 

Query: 8   HQCTGLRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISSPIPTPQTTERFKLKQT 67
           HQ  GLRC PL S  S LSKP   +  +  A  SF   A +  +   T    ER KLK+ 
Sbjct: 7   HQFAGLRCPPLSS--SPLSKPSSAASSKAPARPSFCSAAVIAGTYALTSAQKERQKLKEV 66

Query: 68  FIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVEIAAKS 127
           F +A DRCR +PMEGV+FT++ F ++LEKYDFD ++G KVKGTV  ++ NGA V+I AKS
Sbjct: 67  FEEAYDRCRTAPMEGVAFTVEDFHSALEKYDFDSEIGTKVKGTVFMTDMNGALVDITAKS 126

Query: 128 PAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGE-NEDDSLTLSLRPIQYELAWERCRQ 187
            AYLP+QE CIH+IK V EAGIYPGL EEFVIIGE N DDSL LSLR IQY+LAWERCRQ
Sbjct: 127 SAYLPVQEACIHKIKHVSEAGIYPGLVEEFVIIGEMNADDSLILSLRSIQYDLAWERCRQ 186

Query: 188 LQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFLVVNEE 247
           LQAEDV+VKGKVV  NKGGV+ +VEGL+GFVPFS+I   STAEELI+KELPLKF+ V+EE
Sbjct: 187 LQAEDVIVKGKVVGGNKGGVVAIVEGLRGFVPFSQISAKSTAEELIDKELPLKFVEVDEE 246

Query: 248 QTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISHDRIRD 307
           Q+R+VLSNRK MADS A+L IGSVV GTV  LK YGAFVDIGGI+GLLH+S+ISHDR+ D
Sbjct: 247 QSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFVDIGGINGLLHVSQISHDRVSD 306

Query: 308 VAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAHRFRQR 367
           ++ VL+PGD LKVMIL+ DRE+G + LSTKKLEP  GDMI NP LVFEKA+EMA  FRQR
Sbjct: 307 ISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQR 366

Query: 368 LAQAEALARADLLSFQPEGRLTLNSDGILDPATPDFSLPATILGMMQI 415
           +AQAEA+ARAD+L FQPE  LTLNS+GIL P T D  LPA  L + +I
Sbjct: 367 IAQAEAMARADMLRFQPESGLTLNSEGILGPLTSD--LPAEGLDLSEI 410

[Close]
BLAST of Cla003778 vs. TrEMBL
Match: A0A0K9R6V0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099990 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 4.0e-141
Identity = 272/406 (67.00%), Postives = 322/406 (79.31%), Query Frame = 1 

Query: 3   LALMAHQCTG-LRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISSPIPTPQTTER 62
           +A +A Q  G LRC PL +  S LSKP    H      R  P+++A+  S     QT ER
Sbjct: 1   MASLAQQLAGGLRCPPLSN--SNLSKPFSPKHTLKP--RFSPIVSAVAVS---NAQTRER 60

Query: 63  FKLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFV 122
            KLKQ F DA +RCRN+PMEGVSFT+  F  +L+KYDF+ ++G++VKGTV  ++ANGA V
Sbjct: 61  QKLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALV 120

Query: 123 EIAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENE-DDSLTLSLRPIQYELA 182
           +I AKS AYLPL E CI+RIK VEEAGI PG+REEFVIIGENE DDSL LSLR IQYELA
Sbjct: 121 DITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELA 180

Query: 183 WERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKF 242
           WERCRQLQAEDVVVKGK+V ANKGGV+ +VEGL+GFVPFS+I   S+AEEL+ KE+PLKF
Sbjct: 181 WERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKF 240

Query: 243 LVVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEIS 302
           + V+EEQ+R+V+SNRK MADS A+L IGSVVTGTV  LK YGAF+DIGGI+GLLH+S+IS
Sbjct: 241 VEVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS 300

Query: 303 HDRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMA 362
           HDR+ D+A VL+PGD LKVMIL+ DRE+G + LSTKKLEP  GDMI NP LVFEKAEEMA
Sbjct: 301 HDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMA 360

Query: 363 HRFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDPATPDFSLPA 407
             FRQR+AQAEA+ARAD+L FQPE  LTL+SDGIL P T D  LPA
Sbjct: 361 QTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSD--LPA 397

[Close]
BLAST of Cla003778 vs. NCBI nr
Match: gi|659076992|ref|XP_008438974.1| (PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis melo])

HSP 1 Score: 569.7 bits (1467), Expect = 6.0e-159
Identity = 295/400 (73.75%), Postives = 336/400 (84.00%), Query Frame = 1 

Query: 3   LALMAHQCTGLRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISSPIPTPQTTERF 62
           +A MA Q TGLRC PL S  SRLSKP    H+ NK+ RS PV AA+IS PIP+PQT ERF
Sbjct: 1   MASMAQQFTGLRCVPLSS--SRLSKPFSSKHLLNKS-RSLPVQAAVISGPIPSPQTKERF 60

Query: 63  KLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVE 122
           KLK+ F +A +RCRN+P+EG+SFTL+ F A+LEKYDFD +LG KVKGTV  ++ NGA V+
Sbjct: 61  KLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVD 120

Query: 123 IAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENE-DDSLTLSLRPIQYELAW 182
           I AKS AYLPLQE CIHRIK VEEAGI+PGLREEFVIIGENE DDSL LSLR IQY+LAW
Sbjct: 121 ITAKSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAW 180

Query: 183 ERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFL 242
           ERCRQLQAEDVVVKGKVVDANKGGV+ VVEGL+GFVPFS+I   STAEEL+NKELPLKF+
Sbjct: 181 ERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFV 240

Query: 243 VVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISH 302
            V+EEQ+R+VLSNRK MADS A+L IGSVVTGTV  LK YGAF+DIGGI+GLLH+S+ISH
Sbjct: 241 EVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISH 300

Query: 303 DRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAH 362
           DRI D+A VL+PGD LKVMIL+ DRE+G + LSTKKLEP  GDMI NP LVFEKAEEMA 
Sbjct: 301 DRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360

Query: 363 RFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDPATPD 402
            FRQR+AQAEALARAD+L FQPE  LTL +DGIL P TP+
Sbjct: 361 TFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPE 397

[Close]
BLAST of Cla003778 vs. NCBI nr
Match: gi|449459770|ref|XP_004147619.1| (PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis sativus])

HSP 1 Score: 564.3 bits (1453), Expect = 2.5e-157
Identity = 292/400 (73.00%), Postives = 334/400 (83.50%), Query Frame = 1 

Query: 3   LALMAHQCTGLRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISSPIPTPQTTERF 62
           +A MA Q TGLRC PL S  SRLSKP    H  NK+ RS PV AA+IS PIP+PQT ERF
Sbjct: 1   MASMAQQFTGLRCAPLSS--SRLSKPFSSKHFLNKS-RSLPVQAAVISGPIPSPQTRERF 60

Query: 63  KLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVE 122
           KLK+ F +A +RCRN+P+EG+SFTL+ F A+LEKYDFD +LG KVKGTV  ++ NGA V+
Sbjct: 61  KLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVD 120

Query: 123 IAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENE-DDSLTLSLRPIQYELAW 182
           I AKS AYLPLQE CIHRIK VEEAG++PGLREEFVIIGENE DDSL LSLR IQY+LAW
Sbjct: 121 ITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAW 180

Query: 183 ERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFL 242
           ERCRQLQAEDVVVKGKVVDANKGGV+ VVEGL+GFVPFS+I   S AEEL++KELPLKF+
Sbjct: 181 ERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEELLSKELPLKFV 240

Query: 243 VVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISH 302
            V+EEQ+R+VLSNRK MADS A+L IGSVVTGTV  LK YGAF+DIGGI+GLLH+S+ISH
Sbjct: 241 EVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISH 300

Query: 303 DRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAH 362
           DRI D+A VL+PGD LKVMIL+ DRE+G + LSTKKLEP  GDMI NP LVFEKAEEMA 
Sbjct: 301 DRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360

Query: 363 RFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDPATPD 402
            FRQR+AQAEALARAD+L FQPE  LTL +DGIL P TP+
Sbjct: 361 TFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPE 397

[Close]
BLAST of Cla003778 vs. NCBI nr
Match: gi|700202052|gb|KGN57185.1| (hypothetical protein Csa_3G168960 [Cucumis sativus])

HSP 1 Score: 535.0 bits (1377), Expect = 1.6e-148
Identity = 279/400 (69.75%), Postives = 323/400 (80.75%), Query Frame = 1 

Query: 3   LALMAHQCTGLRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISSPIPTPQTTERF 62
           +A MA Q TGLRC PL S  SRLSKP    H  NK+ RS PV AA+IS PIP+PQT ERF
Sbjct: 1   MASMAQQFTGLRCAPLSS--SRLSKPFSSKHFLNKS-RSLPVQAAVISGPIPSPQTRERF 60

Query: 63  KLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVE 122
           KLK+ F +A +RCRN+P+EG+SFTL+ F A+LEKYDFD +LG KVKGTV  ++ NGA V+
Sbjct: 61  KLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVD 120

Query: 123 IAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENE-DDSLTLSLRPIQYELAW 182
           I AKS AYLPLQE CIHRIK VEEAG++PGLREEFVIIGENE DDSL LSLR IQY+LAW
Sbjct: 121 ITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAW 180

Query: 183 ERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFL 242
           ERCRQLQAEDVVVKGKVVDANKGGV+ VVEGL+GFVPFS+I  +      +  +L + ++
Sbjct: 181 ERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTVMLIFHFLPPQLSIGYI 240

Query: 243 VVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISH 302
               EQ+R+VLSNRK MADS A+L IGSVVTGTV  LK YGAF+DIGGI+GLLH+S+ISH
Sbjct: 241 ----EQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISH 300

Query: 303 DRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAH 362
           DRI D+A VL+PGD LKVMIL+ DRE+G + LSTKKLEP  GDMI NP LVFEKAEEMA 
Sbjct: 301 DRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360

Query: 363 RFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDPATPD 402
            FRQR+AQAEALARAD+L FQPE  LTL +DGIL P TP+
Sbjct: 361 TFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPE 393

[Close]
BLAST of Cla003778 vs. NCBI nr
Match: gi|658010657|ref|XP_008340566.1| (PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Malus domestica])

HSP 1 Score: 515.4 bits (1326), Expect = 1.4e-142
Identity = 271/400 (67.75%), Postives = 318/400 (79.50%), Query Frame = 1 

Query: 3   LALMAHQCTGLRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISSPIPTPQTTERF 62
           +A +A Q TGLRC PL +  SRLSKP  R   QNK     P+++A +   I   QT ER 
Sbjct: 1   MASLAQQFTGLRCSPLST--SRLSKPSIRPK-QNKMPGLLPIVSAAV---ISNAQTKERL 60

Query: 63  KLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFVE 122
           KLK+ F DA +RCR +PMEGVSFTL  F  +LEKYDF+ ++G KV+GTV   + NGA V+
Sbjct: 61  KLKEIFEDAHERCRTAPMEGVSFTLDSFYNALEKYDFNSEIGTKVRGTVFNIDNNGALVD 120

Query: 123 IAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENE-DDSLTLSLRPIQYELAW 182
           I AKS AYLPLQE CIH+IK VEE GI PG+REEFVIIGENE DDSL LSL+ IQY+LAW
Sbjct: 121 ITAKSSAYLPLQEACIHKIKSVEEVGIVPGVREEFVIIGENEADDSLILSLKSIQYDLAW 180

Query: 183 ERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKFL 242
           ERCRQLQAEDVVVKGKVV ANKGGV+ VVEGL+GFVPFS+I   STAE+L+ KE+PLKF+
Sbjct: 181 ERCRQLQAEDVVVKGKVVGANKGGVVAVVEGLRGFVPFSQISTKSTAEDLLEKEIPLKFV 240

Query: 243 VVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEISH 302
            V+EEQ+R+VLSNRK MAD+ A+L IGSVV GTV  LK YGAF+DIGGI+GLLH+S+ISH
Sbjct: 241 EVDEEQSRLVLSNRKAMADNQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISH 300

Query: 303 DRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMAH 362
           DR+ D+A VL+PGD LKVMIL+ DRE+G + LSTKKLEP  GDMI NP LVFEKAEEMA 
Sbjct: 301 DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVFEKAEEMAQ 360

Query: 363 RFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDPATPD 402
            FRQR+AQAEA+ARAD+L FQPE  LTL+SDGIL P T D
Sbjct: 361 TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSD 394

[Close]
BLAST of Cla003778 vs. NCBI nr
Match: gi|225432062|ref|XP_002280604.1| (PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera])

HSP 1 Score: 512.7 bits (1319), Expect = 8.8e-142
Identity = 270/414 (65.22%), Postives = 323/414 (78.02%), Query Frame = 1 

Query: 3   LALMAHQCTGLRCEPLFSISSRLSKPLDRSHMQNKAARSFPVLAALISS-PIPTPQTTER 62
           +A +A Q TGLRC P+ S  SRLSKP      Q       P    ++S+  I   QT ER
Sbjct: 1   MACLAQQFTGLRCPPISS--SRLSKPFSPKQPQK------PSFVRIVSAVAISNAQTKER 60

Query: 63  FKLKQTFIDAADRCRNSPMEGVSFTLQHFLASLEKYDFDPQLGAKVKGTVVYSEANGAFV 122
            KLK+ F DA +RCR +P EGVSF+   F ++L+KYDF+ ++G KVKGTV  ++ NGA V
Sbjct: 61  LKLKEMFEDAYERCRTAPTEGVSFSADDFYSALDKYDFNSEIGTKVKGTVFCTDTNGALV 120

Query: 123 EIAAKSPAYLPLQETCIHRIKRVEEAGIYPGLREEFVIIGENE-DDSLTLSLRPIQYELA 182
           +I AKS AYLP+ E CIH+IK VEEAGI PG+REEFVIIGENE DDSL LSLR IQY+LA
Sbjct: 121 DITAKSSAYLPVYEACIHKIKHVEEAGIVPGVREEFVIIGENEADDSLILSLRSIQYDLA 180

Query: 183 WERCRQLQAEDVVVKGKVVDANKGGVLVVVEGLKGFVPFSEILMISTAEELINKELPLKF 242
           WERCRQLQAEDVVVKGKVV ANKGGV+ +VEGL+GFVPFS+I   +TAEEL++KELP+KF
Sbjct: 181 WERCRQLQAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISSKTTAEELLDKELPVKF 240

Query: 243 LVVNEEQTRVVLSNRKVMADSNAELAIGSVVTGTVLKLKEYGAFVDIGGIHGLLHISEIS 302
           + V+EEQ+R+VLSNRK MADS A+L IGSVVTGTV  LK YGAF+DIGGI+GLLH+S+IS
Sbjct: 241 VEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS 300

Query: 303 HDRIRDVAAVLKPGDVLKVMILNIDREKGHIRLSTKKLEPNTGDMICNPGLVFEKAEEMA 362
           HDR+ D+A VL+PGD+LKVMIL+ DRE+G + LSTKKLEP  GDMI NP LVFEKAEEMA
Sbjct: 301 HDRVSDIATVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMA 360

Query: 363 HRFRQRLAQAEALARADLLSFQPEGRLTLNSDGILDPATPDFSLPATILGMMQI 415
             FRQR+AQAEA+ARAD+L FQPE  LTLNSDGIL P + D  LPA  L +  +
Sbjct: 361 QTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPVSAD--LPAEGLDLSDV 404

The following BLAST results are available for this feature:
BLAST of Cla003778 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RR1_SPIOL3.6e-14367.0030S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1[more]
RPS1_ARATH1.7e-14063.1730S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana GN=RPS1 PE=1 SV=... [more]
RS1_SYNP68.6e-7349.1630S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SA... [more]
RS1A_SYNY38.9e-7049.1530S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazus... [more]
RS1_SYNE71.6e-4235.9630S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942) GN=rpsA PE... [more]
BLAST of Cla003778 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5E7_CUCSA1.1e-14869.75Uncharacterized protein OS=Cucumis sativus GN=Csa_3G168960 PE=4 SV=1[more]
D7SYG9_VITVI6.1e-14265.22Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00450 PE=4 SV=... [more]
M5XQU6_PRUPE1.0e-14167.75Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006438mg PE=4 SV=1[more]
E9P1K6_MUSAC3.0e-14166.18Ribosomal protein S4 OS=Musa acuminata AAA Group GN=RPS4 PE=2 SV=1[more]
A0A0K9R6V0_SPIOL4.0e-14167.00Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099990 PE=4 SV=1[more]
BLAST of Cla003778 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076992|ref|XP_008438974.1|6.0e-15973.75PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis melo][more]
gi|449459770|ref|XP_004147619.1|2.5e-15773.00PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis sativus][more]
gi|700202052|gb|KGN57185.1|1.6e-14869.75hypothetical protein Csa_3G168960 [Cucumis sativus][more]
gi|658010657|ref|XP_008340566.1|1.4e-14267.75PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Malus domestica][more]
gi|225432062|ref|XP_002280604.1|8.8e-14265.22PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003029S1_domain
IPR012340NA-bd_OB-fold
IPR022967S1_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051186 cofactor metabolic process
biological_process GO:0044271 cellular nitrogen compound biosynthetic process
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0009657 plastid organization
biological_process GO:0009735 response to cytokinin
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0044711 single-organism biosynthetic process
biological_process GO:0044281 small molecule metabolic process
biological_process GO:0006412 translation
biological_process GO:0008150 biological_process
biological_process GO:0019682 glyceraldehyde-3-phosphate metabolic process
biological_process GO:1901566 organonitrogen compound biosynthetic process
biological_process GO:0010467 gene expression
cellular_component GO:0009536 plastid
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0009579 thylakoid
cellular_component GO:0005840 ribosome
cellular_component GO:0016020 membrane
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003729 mRNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU40043watermelon EST collection version 2.0transcribed_cluster
WMU61958watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003778Cla003778.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU61958WMU61958transcribed_cluster
WMU40043WMU40043transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003029S1 domainPFAMPF00575S1coord: 265..336
score: 2.8E-20coord: 189..253
score: 7.
IPR003029S1 domainPROFILEPS50126S1coord: 268..336
score: 22.541coord: 104..173
score: 11.899coord: 191..255
score: 13
IPR012340Nucleic acid-binding, OB-foldGENE3DG3DSA:2.40.50.140coord: 98..173
score: 3.6E-5coord: 180..257
score: 1.8E-10coord: 263..338
score: 1.1
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 266..344
score: 1.42E-22coord: 186..259
score: 1.86E-8coord: 90..199
score: 5.0
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 266..336
score: 3.3E-26coord: 102..173
score: 1.0E-4coord: 189..255
score: 3.
NoneNo IPR availableunknownCoilCoilcoord: 353..373
scor
NoneNo IPR availablePANTHERPTHR10724S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 53..424
score: 2.6E
NoneNo IPR availablePANTHERPTHR10724:SF7RIBOSOMAL PROTEIN S1-RELATEDcoord: 53..424
score: 2.6E