Cla003556 (gene) Watermelon (97103) v1

Overview
NameCla003556
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPeptidyl-prolyl cis-trans isomerase (AHRD V1 ***- F2URI0_SALS5); contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
LocationChr1 : 14437174 .. 14438421 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGACATCCATATGAGATTGTATCCCGAGGAGTGTCCTAAAACAGTGGAAAACTTCACAACGCATTGCAGGAACGGCTATTATGATAATCTTATCTTTCATCGGGTCATCAAAGGCTTCATGATACAGACAGGAGATCCTTTAGGAGATGGAACTGGTGGTCAGTCTATTTGGGGAAGAGAGTTTGAAGATGAATTTCACAAAAGGTAACTATTATATTGACTATTTTTCATCTTTCCCACAAAAGCTAGCAATATTATATTTACTGTTATATTGACTATTTTTCTCACAAAAGCTAGCAATATTACTAATTTTCTTTCTCAAACCTTACAATAGACTACTAATTTTAAACCGATCTAGAGTAATTTAGACAATTACAAATTGGAGAATAAAACTATCACCCCTGATGCGTGATGCCTCCTTTAGTTTTTTGGTTGGATAAGGAGAAATCCTCATACAATCTAATAGGCGCTTCTCACTATTTAAGTTTATGGTTCTTGAAGATTGGAGCTGCATGCATATGGACCTTATGGTTTGTGCATTTTGTATCTTTGCAGTTTACGGCATGACAGGCCTTTCACAGTTTCAATGGCTAATGCAGGCCCAAACACAAATGGGTCTCAGTTTTTTATCACAACCGTAGCCACTCCTTGGCTGGACAACAAGCATACAGTGTTTGGACGAGTTATTAAAGGCATGGACGTTGTGCAGGTATGGTTTTGTTATGATCCATTGGGCGATCTTTTTGTTTATTCATTCCATTTGGTACTTTTATGGGTTTTAATTATAAATTTTGTAAACATGTATATCCTTCAGTAACTTAATATCAAATTTTAGTTGGATGATCTTGAATGACATTGCTAACTTTTGATAGTATGGCTTATTACAAATGAATTAATGTAAACCAGGATTGACATTTTTGCCGATAATTCAATAACCAAGTAAATTGCCTGTAACTTGAGGGTATTGATAAATTCACTGAATTAGATTTTAAGTGATTGCAACTTGCAAGCATGTTATGCTAGATTAGGGTTAAGATATTTGATGTGGTCTCTGTGCTTTTGCGTTTATATTATTCGTACCTGTAGCCTGAATCTCTTTATTCACAATTGGTGAGAACTAGAACTAAGAATTTTGTTAAATTCTTGTATATTTAAACAGACAATCGAGAAAGTGAAAACAGACAAGGCAGACAAGCCATATCAAGATGTGAAAATCTTAAATGTATCTGTCCCGAAGCCTTGA

mRNA sequence

ATGGGGGACATCCATATGAGATTGTATCCCGAGGAGTGTCCTAAAACAGTGGAAAACTTCACAACGCATTGCAGGAACGGCTATTATGATAATCTTATCTTTCATCGGGTCATCAAAGGCTTCATGATACAGACAGGAGATCCTTTAGGAGATGGAACTGGTGGTCAGTCTATTTGGGGAAGAGAGTTTGAAGATGAATTTCACAAAAGTTTACGGCATGACAGGCCTTTCACAGTTTCAATGGCTAATGCAGGCCCAAACACAAATGGGTCTCAGTTTTTTATCACAACCGTAGCCACTCCTTGGCTGGACAACAAGCATACAGTGTTTGGACGAGTTATTAAAGGCATGGACGTTGTGCAGACAATCGAGAAAGTGAAAACAGACAAGGCAGACAAGCCATATCAAGATGTGAAAATCTTAAATGTATCTGTCCCGAAGCCTTGA

Coding sequence (CDS)

ATGGGGGACATCCATATGAGATTGTATCCCGAGGAGTGTCCTAAAACAGTGGAAAACTTCACAACGCATTGCAGGAACGGCTATTATGATAATCTTATCTTTCATCGGGTCATCAAAGGCTTCATGATACAGACAGGAGATCCTTTAGGAGATGGAACTGGTGGTCAGTCTATTTGGGGAAGAGAGTTTGAAGATGAATTTCACAAAAGTTTACGGCATGACAGGCCTTTCACAGTTTCAATGGCTAATGCAGGCCCAAACACAAATGGGTCTCAGTTTTTTATCACAACCGTAGCCACTCCTTGGCTGGACAACAAGCATACAGTGTTTGGACGAGTTATTAAAGGCATGGACGTTGTGCAGACAATCGAGAAAGTGAAAACAGACAAGGCAGACAAGCCATATCAAGATGTGAAAATCTTAAATGTATCTGTCCCGAAGCCTTGA

Protein sequence

MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWGREFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVVQTIEKVKTDKADKPYQDVKILNVSVPKP
Homology
[Close]
BLAST of Cla003556 vs. Swiss-Prot
Match: CPY71_ARATH (Peptidyl-prolyl cis-trans isomerase CYP71 OS=Arabidopsis thaliana GN=CYP71 PE=1 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 6.8e-80
Identity = 136/147 (92.52%), Postives = 142/147 (96.60%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           +GDIHM+LYPEECPKTVENFTTHCRNGYYDN +FHRVI+GFMIQTGDPLGDGTGGQSIWG
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGYYDNHLFHRVIRGFMIQTGDPLGDGTGGQSIWG 543

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
           REFEDEFHKSLRHDRPFT+SMANAGPNTNGSQFFITTVATPWLDNKHTVFGRV+KGMDVV
Sbjct: 544 REFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVV 603

Query: 121 QTIEKVKTDKADKPYQDVKILNVSVPK 148
           Q IEKVKTDK D+PYQDVKILNV+VPK
Sbjct: 604 QGIEKVKTDKNDRPYQDVKILNVTVPK 630

[Close]
BLAST of Cla003556 vs. Swiss-Prot
Match: CYP15_RHIO9 (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=cyp15 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.4e-62
Identity = 106/144 (73.61%), Postives = 118/144 (81.94%), Query Frame = 1 

Query: 2   GDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWGR 61
           GDIHMRL+P+  PK VENFTTH +NGYYDNLIFHRVIKGFMIQTG P GDGTGG+SIWG 
Sbjct: 486 GDIHMRLFPDAAPKAVENFTTHAKNGYYDNLIFHRVIKGFMIQTGCPFGDGTGGESIWGD 545

Query: 62  EFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVVQ 121
           +FEDEF +  RHDRP+TVSMANAGPNTNGSQFFIT   T WLDNKH+VFGRV  GMDVV 
Sbjct: 546 DFEDEFSREFRHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKHSVFGRVTAGMDVVH 605

Query: 122 TIEKVKTDKADKPYQDVKILNVSV 146
           +IE  K DK +KP  D+KI+N+ +
Sbjct: 606 SIESAKVDKTNKPLDDIKIINIDI 629

[Close]
BLAST of Cla003556 vs. Swiss-Prot
Match: PPWD1_BOVIN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Bos taurus GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-61
Identity = 108/146 (73.97%), Postives = 121/146 (82.88%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIH++L+P ECPKTVENF  H RNGYY+   FHR+IKGFMIQTGDP G G GG+SIWG
Sbjct: 498 MGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWG 557

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
            EFEDEFH +LRHDRP+T+SMANAG NTNGSQFFIT V TPWLDNKHTVFGRV KGM+VV
Sbjct: 558 GEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVV 617

Query: 121 QTIEKVKTD-KADKPYQDVKILNVSV 146
           Q I  VK + K DKPY+DV I+N++V
Sbjct: 618 QRISNVKVNPKTDKPYEDVSIINITV 643

[Close]
BLAST of Cla003556 vs. Swiss-Prot
Match: PPWD1_MOUSE (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Mus musculus GN=Ppwd1 PE=1 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-61
Identity = 108/146 (73.97%), Postives = 121/146 (82.88%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIH++L+P ECPKTVENF  H RNGYY+   FHR+IKGFMIQTGDP G G GG+SIWG
Sbjct: 500 MGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWG 559

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
            EFEDEFH +LRHDRP+T+SMANAG NTNGSQFFIT V TPWLDNKHTVFGRV KGM+VV
Sbjct: 560 GEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVV 619

Query: 121 QTIEKVKTD-KADKPYQDVKILNVSV 146
           Q I  VK + K DKPY+DV I+N++V
Sbjct: 620 QRISNVKVNPKTDKPYEDVSIINITV 645

[Close]
BLAST of Cla003556 vs. Swiss-Prot
Match: PPWD1_HUMAN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-61
Identity = 108/146 (73.97%), Postives = 120/146 (82.19%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIH +L+P ECPKTVENF  H RNGYY+   FHR+IKGFMIQTGDP G G GG+SIWG
Sbjct: 500 MGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWG 559

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
            EFEDEFH +LRHDRP+T+SMANAG NTNGSQFFIT V TPWLDNKHTVFGRV KGM+VV
Sbjct: 560 GEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVV 619

Query: 121 QTIEKVKTD-KADKPYQDVKILNVSV 146
           Q I  VK + K DKPY+DV I+N++V
Sbjct: 620 QRISNVKVNPKTDKPYEDVSIINITV 645

[Close]
BLAST of Cla003556 vs. TrEMBL
Match: A0A0A0LSZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G153530 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.1e-83
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG
Sbjct: 477 MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 536

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
           REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV
Sbjct: 537 REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 596

Query: 121 QTIEKVKTDKADKPYQDVKILNVSVPKP 149
           QTIEKVKTDKADKPYQDVKILNVSVPKP
Sbjct: 597 QTIEKVKTDKADKPYQDVKILNVSVPKP 624

[Close]
BLAST of Cla003556 vs. TrEMBL
Match: A0A0D2N8L4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G120700 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 2.5e-81
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG
Sbjct: 474 MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 533

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
           REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRV+KGMDVV
Sbjct: 534 REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVV 593

Query: 121 QTIEKVKTDKADKPYQDVKILNVSVPK 148
           Q IEKVKTDKADKPYQDVKILNV+VPK
Sbjct: 594 QGIEKVKTDKADKPYQDVKILNVTVPK 620

[Close]
BLAST of Cla003556 vs. TrEMBL
Match: A0A0B0NSI4_GOSAR (Peptidylprolyl isomerase domain and WD repeat-containing 1 OS=Gossypium arboreum GN=F383_00471 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 2.5e-81
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG
Sbjct: 407 MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 466

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
           REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRV+KGMDVV
Sbjct: 467 REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVV 526

Query: 121 QTIEKVKTDKADKPYQDVKILNVSVPK 148
           Q IEKVKTDKADKPYQDVKILNV+VPK
Sbjct: 527 QGIEKVKTDKADKPYQDVKILNVTVPK 553

[Close]
BLAST of Cla003556 vs. TrEMBL
Match: A0A0D2QPD3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G120700 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 2.5e-81
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG
Sbjct: 366 MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 425

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
           REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRV+KGMDVV
Sbjct: 426 REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVV 485

Query: 121 QTIEKVKTDKADKPYQDVKILNVSVPK 148
           Q IEKVKTDKADKPYQDVKILNV+VPK
Sbjct: 486 QGIEKVKTDKADKPYQDVKILNVTVPK 512

[Close]
BLAST of Cla003556 vs. TrEMBL
Match: A0A0D2PXQ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G120700 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 2.5e-81
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG
Sbjct: 338 MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 397

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
           REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRV+KGMDVV
Sbjct: 398 REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVV 457

Query: 121 QTIEKVKTDKADKPYQDVKILNVSVPK 148
           Q IEKVKTDKADKPYQDVKILNV+VPK
Sbjct: 458 QGIEKVKTDKADKPYQDVKILNVTVPK 484

[Close]
BLAST of Cla003556 vs. NCBI nr
Match: gi|449443428|ref|XP_004139479.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP71 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 3.0e-83
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG
Sbjct: 477 MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 536

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
           REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV
Sbjct: 537 REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 596

Query: 121 QTIEKVKTDKADKPYQDVKILNVSVPKP 149
           QTIEKVKTDKADKPYQDVKILNVSVPKP
Sbjct: 597 QTIEKVKTDKADKPYQDVKILNVSVPKP 624

[Close]
BLAST of Cla003556 vs. NCBI nr
Match: gi|659071742|ref|XP_008461705.1| (PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing protein 1 [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 3.0e-83
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG
Sbjct: 477 MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 536

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
           REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV
Sbjct: 537 REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 596

Query: 121 QTIEKVKTDKADKPYQDVKILNVSVPKP 149
           QTIEKVKTDKADKPYQDVKILNVSVPKP
Sbjct: 597 QTIEKVKTDKADKPYQDVKILNVSVPKP 624

[Close]
BLAST of Cla003556 vs. NCBI nr
Match: gi|763741542|gb|KJB09041.1| (hypothetical protein B456_001G120700 [Gossypium raimondii])

HSP 1 Score: 309.3 bits (791), Expect = 3.6e-81
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG
Sbjct: 338 MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 397

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
           REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRV+KGMDVV
Sbjct: 398 REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVV 457

Query: 121 QTIEKVKTDKADKPYQDVKILNVSVPK 148
           Q IEKVKTDKADKPYQDVKILNV+VPK
Sbjct: 458 QGIEKVKTDKADKPYQDVKILNVTVPK 484

[Close]
BLAST of Cla003556 vs. NCBI nr
Match: gi|728834618|gb|KHG14061.1| (Peptidylprolyl isomerase domain and WD repeat-containing 1 [Gossypium arboreum])

HSP 1 Score: 309.3 bits (791), Expect = 3.6e-81
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG
Sbjct: 407 MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 466

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
           REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRV+KGMDVV
Sbjct: 467 REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVV 526

Query: 121 QTIEKVKTDKADKPYQDVKILNVSVPK 148
           Q IEKVKTDKADKPYQDVKILNV+VPK
Sbjct: 527 QGIEKVKTDKADKPYQDVKILNVTVPK 553

[Close]
BLAST of Cla003556 vs. NCBI nr
Match: gi|823123629|ref|XP_012476612.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP71 isoform X1 [Gossypium raimondii])

HSP 1 Score: 309.3 bits (791), Expect = 3.6e-81
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 1 

Query: 1   MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 60
           MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG
Sbjct: 474 MGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWG 533

Query: 61  REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVIKGMDVV 120
           REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRV+KGMDVV
Sbjct: 534 REFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVV 593

Query: 121 QTIEKVKTDKADKPYQDVKILNVSVPK 148
           Q IEKVKTDKADKPYQDVKILNV+VPK
Sbjct: 594 QGIEKVKTDKADKPYQDVKILNVTVPK 620

The following BLAST results are available for this feature:
BLAST of Cla003556 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CPY71_ARATH6.8e-8092.52Peptidyl-prolyl cis-trans isomerase CYP71 OS=Arabidopsis thaliana GN=CYP71 PE=1 ... [more]
CYP15_RHIO96.4e-6273.61Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus delemar (strain RA 99-880 ... [more]
PPWD1_BOVIN1.9e-6173.97Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Bos taurus... [more]
PPWD1_MOUSE1.9e-6173.97Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Mus muscul... [more]
PPWD1_HUMAN3.2e-6173.97Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapie... [more]
BLAST of Cla003556 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSZ3_CUCSA2.1e-83100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G153530 PE=4 SV=1[more]
A0A0D2N8L4_GOSRA2.5e-8197.96Uncharacterized protein OS=Gossypium raimondii GN=B456_001G120700 PE=4 SV=1[more]
A0A0B0NSI4_GOSAR2.5e-8197.96Peptidylprolyl isomerase domain and WD repeat-containing 1 OS=Gossypium arboreum... [more]
A0A0D2QPD3_GOSRA2.5e-8197.96Uncharacterized protein OS=Gossypium raimondii GN=B456_001G120700 PE=4 SV=1[more]
A0A0D2PXQ7_GOSRA2.5e-8197.96Uncharacterized protein OS=Gossypium raimondii GN=B456_001G120700 PE=4 SV=1[more]
BLAST of Cla003556 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443428|ref|XP_004139479.1|3.0e-83100.00PREDICTED: peptidyl-prolyl cis-trans isomerase CYP71 [Cucumis sativus][more]
gi|659071742|ref|XP_008461705.1|3.0e-83100.00PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing protein 1 [C... [more]
gi|763741542|gb|KJB09041.1|3.6e-8197.96hypothetical protein B456_001G120700 [Gossypium raimondii][more]
gi|728834618|gb|KHG14061.1|3.6e-8197.96Peptidylprolyl isomerase domain and WD repeat-containing 1 [Gossypium arboreum][more]
gi|823123629|ref|XP_012476612.1|3.6e-8197.96PREDICTED: peptidyl-prolyl cis-trans isomerase CYP71 isoform X1 [Gossypium raimo... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR020892Cyclophilin-type_PPIase_CS
IPR024936Cyclophilin-type_PPIase
Vocabulary: Biological Process
TermDefinition
GO:0000413protein peptidyl-prolyl isomerization
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048440 carpel development
biological_process GO:0009909 regulation of flower development
biological_process GO:0048443 stamen development
biological_process GO:0048453 sepal formation
biological_process GO:0010082 regulation of root meristem growth
biological_process GO:0010338 leaf formation
biological_process GO:0031060 regulation of histone methylation
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0006457 protein folding
biological_process GO:0009933 meristem structural organization
biological_process GO:0010305 leaf vascular tissue pattern formation
biological_process GO:0010358 leaf shaping
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
molecular_function GO:0003682 chromatin binding
molecular_function GO:0042393 histone binding
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU68587watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003556Cla003556.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU68587WMU68587transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 8..23
score: 4.5E-33coord: 34..46
score: 4.5E-33coord: 92..104
score: 4.5E-33coord: 105..120
score: 4.5E-33coord: 77..92
score: 4.5
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 1..144
score: 2.6
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROFILEPS50072CSA_PPIASE_2coord: 1..145
score: 37
IPR020892Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved sitePROSITEPS00170CSA_PPIASE_1coord: 29..46
scor
IPR024936Cyclophilin-type peptidyl-prolyl cis-trans isomerasePIRPIRSF001467Peptidylpro_ismrsecoord: 1..147
score: 7.7
IPR024936Cyclophilin-type peptidyl-prolyl cis-trans isomerasePANTHERPTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 1..145
score: 2.1E
NoneNo IPR availablePANTHERPTHR11071:SF213PEPTIDYLPROLYL ISOMERASE DOMAIN AND WD REPEAT-CONTAINING PROTEIN 1coord: 1..145
score: 2.1E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla003556Melon (DHL92) v3.6.1medwmB155
Cla003556Cucumber (Chinese Long) v3cucwmB049
Cla003556Watermelon (97103) v2wmwmbB250
Cla003556Wax gourdwgowmB510
Cla003556Cucumber (Gy14) v1cgywmB392
Cla003556Cucurbita maxima (Rimu)cmawmB168
Cla003556Cucurbita maxima (Rimu)cmawmB199
Cla003556Cucurbita moschata (Rifu)cmowmB154
Cla003556Cucurbita moschata (Rifu)cmowmB186
Cla003556Melon (DHL92) v3.5.1mewmB159
Cla003556Watermelon (Charleston Gray)wcgwmB158
Cla003556Cucumber (Chinese Long) v2cuwmB042
Cla003556Cucurbita pepo (Zucchini)cpewmB518
Cla003556Bottle gourd (USVL1VR-Ls)lsiwmB260
Cla003556Cucumber (Gy14) v2cgybwmB043