Cla003180 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla003180
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Disease resistance-responsive (Dirigent-like protein) family protein (AHRD V1 -- F4JDF3_ARATH); contains Interpro domain(s) IPR004265 Plant disease resistance response protein
Location	Chr2 : 33833994 .. 33834560 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATCAAAATCAGGATCTTCAGCATCATAATTTTGTTATCGGCAGCGGTAAATACGGCGGCCGGAAAGAAAGATGGATATTCAACCGAGGTAAGCCCCAAAACCTTGAAGCTACACAAGGAAAAGCTAACCCGCATTCAATTGTACTGGCACGACACGGTGGCTGGCCGCAAGCCATCGAGCGTGGCGGTACTGCCGTCGCTGAAGAACGGTTCCATGTTCGGGCTTGTGCACATGTTCGACAACCCATTAAGCGTGGGTCCTAACCTGACGACGTCGGCGGTGGTTGGGAGGTCGCAAGGGCTTTACGCTTCGACCGCACTGGATCAGGTGGGGCTGCTGATGGCTATGAATTTCGCTTTGACTCAAGGTAAATACAAGGGCAGCACCATCACAATCTTGGGCCGGAACACCATTCTCCAAACGGTCAGGGAGTTGTCGGTCATCGGTGGTAGTGGCCGCTTCCGCTTTGCTAGAGGCTTCGCTCTTGCTAACACTTATTATTTCAACCCTGCCACTTTTGATGCCATCGTTCACTATGATATTCATGTCTTGCATTATTGA

mRNA sequence

ATGATGATCAAAATCAGGATCTTCAGCATCATAATTTTGTTATCGGCAGCGGTAAATACGGCGGCCGGAAAGAAAGATGGATATTCAACCGAGGTAAGCCCCAAAACCTTGAAGCTACACAAGGAAAAGCTAACCCGCATTCAATTGTACTGGCACGACACGGTGGCTGGCCGCAAGCCATCGAGCGTGGCGGTACTGCCGTCGCTGAAGAACGGTTCCATGTTCGGGCTTGTGCACATGTTCGACAACCCATTAAGCGTGGGTCCTAACCTGACGACGTCGGCGGTGGTTGGGAGGTCGCAAGGGCTTTACGCTTCGACCGCACTGGATCAGGTGGGGCTGCTGATGGCTATGAATTTCGCTTTGACTCAAGGTAAATACAAGGGCAGCACCATCACAATCTTGGGCCGGAACACCATTCTCCAAACGGTCAGGGAGTTGTCGGTCATCGGTGGTAGTGGCCGCTTCCGCTTTGCTAGAGGCTTCGCTCTTGCTAACACTTATTATTTCAACCCTGCCACTTTTGATGCCATCGTTCACTATGATATTCATGTCTTGCATTATTGA

Coding sequence (CDS)

ATGATGATCAAAATCAGGATCTTCAGCATCATAATTTTGTTATCGGCAGCGGTAAATACGGCGGCCGGAAAGAAAGATGGATATTCAACCGAGGTAAGCCCCAAAACCTTGAAGCTACACAAGGAAAAGCTAACCCGCATTCAATTGTACTGGCACGACACGGTGGCTGGCCGCAAGCCATCGAGCGTGGCGGTACTGCCGTCGCTGAAGAACGGTTCCATGTTCGGGCTTGTGCACATGTTCGACAACCCATTAAGCGTGGGTCCTAACCTGACGACGTCGGCGGTGGTTGGGAGGTCGCAAGGGCTTTACGCTTCGACCGCACTGGATCAGGTGGGGCTGCTGATGGCTATGAATTTCGCTTTGACTCAAGGTAAATACAAGGGCAGCACCATCACAATCTTGGGCCGGAACACCATTCTCCAAACGGTCAGGGAGTTGTCGGTCATCGGTGGTAGTGGCCGCTTCCGCTTTGCTAGAGGCTTCGCTCTTGCTAACACTTATTATTTCAACCCTGCCACTTTTGATGCCATCGTTCACTATGATATTCATGTCTTGCATTATTGA

Protein sequence

MMIKIRIFSIIILLSAAVNTAAGKKDGYSTEVSPKTLKLHKEKLTRIQLYWHDTVAGRKPSSVAVLPSLKNGSMFGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMNFALTQGKYKGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIVHYDIHVLHY

Homology

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BLAST of Cla003180 vs. Swiss-Prot
Match: DIR20_ARATH (Dirigent protein 20 OS=Arabidopsis thaliana GN=DIR20 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.7e-41
Identity = 88/188 (46.81%), Postives = 118/188 (62.77%), Query Frame = 1


Query: 2   MIKIRIFSIIILLSAAVNTAAGKKDGYSTEVSPKTLKLHK-EKLTRIQLYWHDTVAGRKP 61
           M K+  F  + +L  AV ++AG  + ++  +  K L LHK EKLT  ++YWHD ++G  P
Sbjct: 1   MAKLIFFLAVQILFLAVVSSAGDGEDFARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNP 60

Query: 62  SSVAVLPSLKNGSMFGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMNF 121
           +S+ + P + N S FG + M DN L+    +  S V+G++QG YA  A  ++G LMAMNF
Sbjct: 61  TSIMIQPPVTNSSYFGAISMIDNALTAKVPMN-STVLGQAQGFYAGAAQKELGFLMAMNF 120

Query: 122 ALTQGKYKGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIVH 181
           A   GKY GSTITILGRNT L  VRE+ ++GGSG FRFARG+  A T + N    DA V 
Sbjct: 121 AFKTGKYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVE 180

Query: 182 YDIHVLHY 189
           Y  +VLHY
Sbjct: 181 YSCYVLHY 187

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BLAST of Cla003180 vs. Swiss-Prot
Match: DIR19_ARATH (Dirigent protein 19 OS=Arabidopsis thaliana GN=DIR19 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.1e-40
Identity = 83/151 (54.97%), Postives = 110/151 (72.85%), Query Frame = 1


Query: 41  KEKLTRIQLYWHDTVAGRKPSSVAVL--PSLKNGSM-FGLVHMFDNPLSVGPNLTTSAVV 100
           KEKLT  ++YWHD V G+  SSV+++  P    G+  FGL+ M DNPL++ P L+ S +V
Sbjct: 36  KEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTPKLS-SKMV 95

Query: 101 GRSQGLYASTALDQVGLLMAMNFALTQGKYKGSTITILGRNTILQTVRELSVIGGSGRFR 160
           GR+QG YA T+ +++GLLMAMNFA+  GKY GSTIT+LGRN++   VRE+ VIGGSG FR
Sbjct: 96  GRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLFR 155

Query: 161 FARGFALANTYYFNPATFDAIVHYDIHVLHY 189
           FARG+  A+T+ FN  T +AIV Y+ ++LHY
Sbjct: 156 FARGYVQASTHEFNLKTGNAIVEYNCYLLHY 185

[Close]

BLAST of Cla003180 vs. Swiss-Prot
Match: DIR7_ARATH (Dirigent protein 7 OS=Arabidopsis thaliana GN=DIR7 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.7e-38
Identity = 83/187 (44.39%), Postives = 113/187 (60.43%), Query Frame = 1


Query: 2   MIKIRIFSIIILLSAAVNTAAGKKDGYSTEVSPKTLKLHKEKLTRIQLYWHDTVAGRKPS 61
           M K+ +  +  +L  A   +A K + ++  +  K   L KEKLT  ++YWHD ++G  PS
Sbjct: 1   MAKLILIIVTQILLIAAVVSARKGENFAKTIDKKHFGLRKEKLTHFRVYWHDILSGSNPS 60

Query: 62  SVAVLPSLKNGSMFGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMNFA 121
           SV + P + N S FG V + DN L+    +  S +VG++QG+YA+T       LM MNFA
Sbjct: 61  SVVINPPISNSSFFGSVTVIDNRLTTEVAVN-STLVGQAQGIYAATGQRDASALMVMNFA 120

Query: 122 LTQGKYKGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIVHY 181
              GKY GS+I ILGRN +L  VRE+ VIGGSG FRFARG+  A T +F+  + DA V Y
Sbjct: 121 FKTGKYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEY 180

Query: 182 DIHVLHY 189
             +VLHY
Sbjct: 181 SCYVLHY 186

[Close]

BLAST of Cla003180 vs. Swiss-Prot
Match: DIR3_ARATH (Dirigent protein 3 OS=Arabidopsis thaliana GN=DIR3 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.8e-37
Identity = 86/188 (45.74%), Postives = 116/188 (61.70%), Query Frame = 1


Query: 5   IRIFSIIILLSAAVNTAAGKKDGYSTEVSPKTLKL-HKEKLTRIQLYWHDTVAGRKPSSV 64
           I I +  ILL  A   A    + ++  ++ K L L  KEKLT +++YWHD V GR PSS+
Sbjct: 5   ILILTAQILLLTATALAGKNGEDFARTINRKHLGLGKKEKLTHLRVYWHDIVTGRNPSSI 64

Query: 65  AV---LPSLKNGSMFGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMNF 124
            +   +    + S FG + M DN L++   +  S VVG++QG+Y   A  ++GLLMAMN 
Sbjct: 65  RIQGPVAKYSSSSYFGSITMIDNALTLDVPIN-STVVGQAQGMYVGAAQKEIGLLMAMNL 124

Query: 125 ALTQGKYKGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIVH 184
           A   GKY GSTITILGRNT++  VRE+ V+GGSG FRFARG+  A T  F+  T DA V 
Sbjct: 125 AFKTGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVE 184

Query: 185 YDIHVLHY 189
            + ++LHY
Sbjct: 185 SNCYILHY 191

[Close]

BLAST of Cla003180 vs. Swiss-Prot
Match: DIR21_ARATH (Dirigent protein 21 OS=Arabidopsis thaliana GN=DIR21 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.1e-33
Identity = 77/190 (40.53%), Postives = 114/190 (60.00%), Query Frame = 1


Query: 1   MMIKIRIFSIIILLSAAVNTAAGKKDGYSTEVSPKTLKLHKEKLTRIQLYWHDTVAGRKP 60
           +++ + +F  +IL +    + +     +ST V         +KLT +  Y+HD V+G KP
Sbjct: 6   LLLLLPLFLALILAATITESKS-----FSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKP 65

Query: 61  SSVAVLPSLKNGSM---FGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMA 120
           +SV V       S    FGLV + D+ L+VGP +T S  VGR+QG+YAS   +++GLLMA
Sbjct: 66  TSVQVANGPTTNSSATGFGLVAVVDDKLTVGPEIT-SEEVGRAQGMYASADQNKLGLLMA 125

Query: 121 MNFALTQGKYKGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDA 180
            N   T+GK+  ST+ + GRN +L  VRE+ +IGG+G FRF RG+ALA T  FN  + DA
Sbjct: 126 FNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDA 185

Query: 181 IVHYDIHVLH 188
           +V Y++++ H
Sbjct: 186 VVEYNVYIWH 189

[Close]

BLAST of Cla003180 vs. TrEMBL
Match: A0A0A0KX42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280650 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-56
Identity = 112/181 (61.88%), Postives = 136/181 (75.14%), Query Frame = 1


Query: 8   FSIIILLSAAVNTAAGKKDGYSTEVSPKTLKLHKEKLTRIQLYWHDTVAGRKPSSVAVLP 67
           F+  +L     +  A   D ++T ++PK LKL KEKLTR  LYWHD V G  P+SV VLP
Sbjct: 7   FTCCLLWCLISSAMASDDDSFATRLNPKVLKLKKEKLTRFHLYWHDVVGGSNPTSVPVLP 66

Query: 68  SLKNGSMFGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMNFALTQGKY 127
            L N ++FGL++MFDNPL+VGP+   S +VGRSQGLYASTA  ++GLLMAMNFA T GKY
Sbjct: 67  RLNNVTLFGLINMFDNPLTVGPD-PKSRLVGRSQGLYASTAQHEIGLLMAMNFAFTYGKY 126

Query: 128 KGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIVHYDIHVLH 187
           KGS+ITILGRN IL  VRE+ V+GG+GRFRFA+G ALA T YFN  T DA+V YDI+VLH
Sbjct: 127 KGSSITILGRNPILNQVREMPVVGGTGRFRFAKGHALAKTQYFNATTLDAVVEYDIYVLH 186

Query: 188 Y 189
           Y
Sbjct: 187 Y 186

[Close]

BLAST of Cla003180 vs. TrEMBL
Match: A0A0A0LUT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015830 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.1e-52
Identity = 105/181 (58.01%), Postives = 136/181 (75.14%), Query Frame = 1


Query: 11  IILLSAAVNTAAGKKDGYSTEVSPKTLKLHK---EKLTRIQLYWHDTVAGRKPSSVAVLP 70
           +ILLS  V++    K  Y+  + PK+LKL+    +KLT ++LYWHDTV+G +PSSVAVLP
Sbjct: 12  LILLSFGVSSTTATKS-YARNIDPKSLKLNNKQHQKLTHLRLYWHDTVSGGRPSSVAVLP 71

Query: 71  SLKNGSMFGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMNFALTQGKY 130
            L N + FG V+MFDNPL+ GP L  S +VGRSQG YA  A DQ+GLLMAMNFA T GKY
Sbjct: 72  PLNNVTEFGQVNMFDNPLTAGPELG-SQLVGRSQGFYAGAAQDQIGLLMAMNFAFTHGKY 131

Query: 131 KGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIVHYDIHVLH 189
           KGS++T++GRN I   VRE+ V+GGSG+FRF  G+ALA T+  +P TFDA+V Y+++VLH
Sbjct: 132 KGSSLTVIGRNHISDAVREMPVVGGSGKFRFGSGYALAKTHCLDPVTFDAVVEYNVYVLH 190

[Close]

BLAST of Cla003180 vs. TrEMBL
Match: A0A067LIA9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19197 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.4e-44
Identity = 96/184 (52.17%), Postives = 127/184 (69.02%), Query Frame = 1


Query: 7   IFSIIILLSAAVNTAAGKKDGYSTEVSPKTLKLHKEKLTRIQLYWHDTVAGRKPSSVAVL 66
           IF  +I   AA  T AG+   +   +  K L   KEKL+  +LYWHD V G  PS+V V+
Sbjct: 12  IFLYLISSFAATPTVAGENHEFVKTIKKKQLGFKKEKLSHFRLYWHDIVTGPNPSAVMVV 71

Query: 67  PSLKNGSM--FGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMNFALTQ 126
           P  +N S+  FG+V M DNPL++GP ++ S +VG++QG YA  A  Q+GLLMAMNFA  +
Sbjct: 72  PP-ENTSLTAFGMVRMIDNPLTLGPEMS-SKLVGKAQGFYAQAAQQQIGLLMAMNFAFIE 131

Query: 127 GKYKGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIVHYDIH 186
           GKY GST+T+LGRN++  TVRE+ VIGGSG FRFARG+  A T+ FN ++ DA V Y+I+
Sbjct: 132 GKYNGSTLTVLGRNSVFDTVREMPVIGGSGLFRFARGYVQAKTHTFNISSGDATVEYNIY 191

Query: 187 VLHY 189
           VLHY
Sbjct: 192 VLHY 193

[Close]

BLAST of Cla003180 vs. TrEMBL
Match: C6SWG8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G207700 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.1e-44
Identity = 100/192 (52.08%), Postives = 130/192 (67.71%), Query Frame = 1


Query: 1   MMIKIRIFSIIILLSAAVNTAAGKKDGYSTEVSPKTLKLH--KEKLTRIQLYWHDTVAGR 60
           M I+  IFS++      ++T A   D +   +  K L L   KEK    + YWHD ++GR
Sbjct: 1   MFIQFLIFSLLFTPFTIISTIAHDTDDFVRTLDRKMLGLDEKKEKFIHFRFYWHDAMSGR 60

Query: 61  KPSSVAVLPS-LKNGSM-FGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLM 120
            PSSV V+P  LKN +  FGLV+M DNPL++GP L  S +VG++QG YAST+  +  LLM
Sbjct: 61  NPSSVEVVPPPLKNSTTRFGLVNMLDNPLTLGPQLN-SKLVGQAQGFYASTSQSEFVLLM 120

Query: 121 AMNFALTQGKYKGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFD 180
           AMN  +T+GKY GSTITILGRN I    RE+ VIGGSG FRFARG+A   TY+F+P+T D
Sbjct: 121 AMNLVITEGKYNGSTITILGRNPIYYEEREMPVIGGSGLFRFARGYAKLRTYWFSPSTRD 180

Query: 181 AIVHYDIHVLHY 189
           AIV Y+++VLHY
Sbjct: 181 AIVEYNVYVLHY 191

[Close]

BLAST of Cla003180 vs. TrEMBL
Match: A0A0B2S632_GLYSO (Disease resistance response protein 206 OS=Glycine soja GN=glysoja_001188 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.0e-43
Identity = 100/192 (52.08%), Postives = 129/192 (67.19%), Query Frame = 1


Query: 1   MMIKIRIFSIIILLSAAVNTAAGKKDGYSTEVSPKTLKLH--KEKLTRIQLYWHDTVAGR 60
           M I+  IFS++      ++T A   D +   +  K L L   KEK    + YWHD ++GR
Sbjct: 1   MFIQFLIFSLLFTPFTIISTIAHDTDDFVRTLDRKMLGLDEKKEKFIHFRFYWHDAMSGR 60

Query: 61  KPSSVAVLPS-LKNGSM-FGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLM 120
            PSSV V+P  LKN +  FGLV+M DNPL++GP L  S +VG++QG YAST+  +  LLM
Sbjct: 61  NPSSVEVVPPPLKNSTTRFGLVNMLDNPLTLGPQLN-SKLVGQAQGFYASTSQSEFVLLM 120

Query: 121 AMNFALTQGKYKGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFD 180
           AMN  +T+GKY GSTITILGRN I    RE+ VIGGSG FRFARG+A   TY+F+P+T D
Sbjct: 121 AMNLVITEGKYNGSTITILGRNPIYYEEREMPVIGGSGLFRFARGYAKLRTYWFSPSTRD 180

Query: 181 AIVHYDIHVLHY 189
           AIV Y++ VLHY
Sbjct: 181 AIVEYNVFVLHY 191

[Close]

BLAST of Cla003180 vs. NCBI nr
Match: gi|778693014|ref|XP_011653564.1| (PREDICTED: dirigent protein 22-like [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 3.0e-56
Identity = 112/181 (61.88%), Postives = 136/181 (75.14%), Query Frame = 1


Query: 8   FSIIILLSAAVNTAAGKKDGYSTEVSPKTLKLHKEKLTRIQLYWHDTVAGRKPSSVAVLP 67
           F+  +L     +  A   D ++T ++PK LKL KEKLTR  LYWHD V G  P+SV VLP
Sbjct: 7   FTCCLLWCLISSAMASDDDSFATRLNPKVLKLKKEKLTRFHLYWHDVVGGSNPTSVPVLP 66

Query: 68  SLKNGSMFGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMNFALTQGKY 127
            L N ++FGL++MFDNPL+VGP+   S +VGRSQGLYASTA  ++GLLMAMNFA T GKY
Sbjct: 67  RLNNVTLFGLINMFDNPLTVGPD-PKSRLVGRSQGLYASTAQHEIGLLMAMNFAFTYGKY 126

Query: 128 KGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIVHYDIHVLH 187
           KGS+ITILGRN IL  VRE+ V+GG+GRFRFA+G ALA T YFN  T DA+V YDI+VLH
Sbjct: 127 KGSSITILGRNPILNQVREMPVVGGTGRFRFAKGHALAKTQYFNATTLDAVVEYDIYVLH 186

Query: 188 Y 189
           Y
Sbjct: 187 Y 186

[Close]

BLAST of Cla003180 vs. NCBI nr
Match: gi|659097739|ref|XP_008449786.1| (PREDICTED: dirigent protein 22-like [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 2.5e-55
Identity = 114/183 (62.30%), Postives = 139/183 (75.96%), Query Frame = 1


Query: 8   FSIIIL--LSAAVNTAAGKKDGYSTEVSPKTLKLHKEKLTRIQLYWHDTVAGRKPSSVAV 67
           F++ +L  L  A+  A+   D ++T ++PK LKL KEKLTR  LYWHD V G  P+SV V
Sbjct: 7   FTLCLLWCLLLAMAMASSDDDSFATRLNPKVLKLKKEKLTRFHLYWHDVVGGSNPTSVPV 66

Query: 68  LPSLKNGSMFGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMNFALTQG 127
           LP L N ++FGL++MFDNPL+VG +   S +VGRSQGLYASTA  ++GLLMAMNFA T G
Sbjct: 67  LPRLDNVTLFGLINMFDNPLTVGAD-PKSRLVGRSQGLYASTAQHEIGLLMAMNFAFTYG 126

Query: 128 KYKGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIVHYDIHV 187
           KYKGS+ITILGRN I+  VRE+ V+GG+GRFRFARG ALA T YFN  T DAIV YDI+V
Sbjct: 127 KYKGSSITILGRNPIVNHVREMPVVGGTGRFRFARGHALAKTQYFNATTLDAIVEYDIYV 186

Query: 188 LHY 189
           LHY
Sbjct: 187 LHY 188

[Close]

BLAST of Cla003180 vs. NCBI nr
Match: gi|659106501|ref|XP_008453355.1| (PREDICTED: dirigent protein 22-like [Cucumis melo])

HSP 1 Score: 212.6 bits (540), Expect = 5.9e-52
Identity = 106/181 (58.56%), Postives = 135/181 (74.59%), Query Frame = 1


Query: 11  IILLSAAVNTAAGKKDGYSTEVSPKTLKLHK---EKLTRIQLYWHDTVAGRKPSSVAVLP 70
           +ILLS  V++    K  Y+ ++ PK+LKL+    +KLT + LYWHDTV+G KPSSVAVLP
Sbjct: 12  LILLSFGVSSTTATKS-YAKDIDPKSLKLNNKQHQKLTHLHLYWHDTVSGAKPSSVAVLP 71

Query: 71  SLKNGSMFGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMNFALTQGKY 130
              N + FG V+MFDNPL+ GP L  S +VG+SQG YA  A DQ+GLLMAMNFA T GKY
Sbjct: 72  PRNNVTEFGQVNMFDNPLTAGPELG-SQLVGQSQGFYAGAAQDQIGLLMAMNFAFTHGKY 131

Query: 131 KGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIVHYDIHVLH 189
           KGS+ T+LGRN I   VRE+ V+GGSG+FRF  G+ALA T+Y +P TFDA+V Y+++VLH
Sbjct: 132 KGSSFTVLGRNPISDGVREMPVVGGSGKFRFGSGYALAKTHYLDPVTFDAVVEYNVYVLH 190

[Close]

BLAST of Cla003180 vs. NCBI nr
Match: gi|449441137|ref|XP_004138340.1| (PREDICTED: dirigent protein 22 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51
Identity = 105/181 (58.01%), Postives = 136/181 (75.14%), Query Frame = 1


Query: 11  IILLSAAVNTAAGKKDGYSTEVSPKTLKLHK---EKLTRIQLYWHDTVAGRKPSSVAVLP 70
           +ILLS  V++    K  Y+  + PK+LKL+    +KLT ++LYWHDTV+G +PSSVAVLP
Sbjct: 12  LILLSFGVSSTTATKS-YARNIDPKSLKLNNKQHQKLTHLRLYWHDTVSGGRPSSVAVLP 71

Query: 71  SLKNGSMFGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMNFALTQGKY 130
            L N + FG V+MFDNPL+ GP L  S +VGRSQG YA  A DQ+GLLMAMNFA T GKY
Sbjct: 72  PLNNVTEFGQVNMFDNPLTAGPELG-SQLVGRSQGFYAGAAQDQIGLLMAMNFAFTHGKY 131

Query: 131 KGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIVHYDIHVLH 189
           KGS++T++GRN I   VRE+ V+GGSG+FRF  G+ALA T+  +P TFDA+V Y+++VLH
Sbjct: 132 KGSSLTVIGRNHISDAVREMPVVGGSGKFRFGSGYALAKTHCLDPVTFDAVVEYNVYVLH 190

[Close]

BLAST of Cla003180 vs. NCBI nr
Match: gi|1009124090|ref|XP_015878884.1| (PREDICTED: dirigent protein 22-like [Ziziphus jujuba])

HSP 1 Score: 186.4 bits (472), Expect = 4.5e-44
Identity = 92/189 (48.68%), Postives = 128/189 (67.72%), Query Frame = 1


Query: 2   MIKIRIFSIIILLSAAVNTAAGKKDGYSTEVSPKTLKLHKEKLTRIQLYWHDTVAGRKPS 61
           ++   I  + +L  +A+   +G  DG+   +  K L LHKEKL+  +LYWHD  +G  P+
Sbjct: 8   ILSTHIIILSLLSFSAITLVSGTYDGFVRTMDSKLLGLHKEKLSHFRLYWHDIYSGSSPT 67

Query: 62  SVAVL--PSLKNGSMFGLVHMFDNPLSVGPNLTTSAVVGRSQGLYASTALDQVGLLMAMN 121
           ++ ++  P+   G+ FG + + D+PL+ GP L+ S ++GR+QG YA  +  QVGLLM MN
Sbjct: 68  ALRLVRPPNNATGTSFGAITIIDDPLTQGPELS-SKLLGRAQGFYAQASQQQVGLLMVMN 127

Query: 122 FALTQGKYKGSTITILGRNTILQTVRELSVIGGSGRFRFARGFALANTYYFNPATFDAIV 181
           FA TQGKY GSTIT+LGRN +   VRE+ VIGGSG FRFARG+A   TY FN +T DAIV
Sbjct: 128 FAFTQGKYNGSTITVLGRNPVFDKVREMPVIGGSGLFRFARGYAQLRTYRFNQSTGDAIV 187

Query: 182 HYDIHVLHY 189
            Y+++VLHY
Sbjct: 188 EYNVYVLHY 195

The following BLAST results are available for this feature:

BLAST of Cla003180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DIR20_ARATH	4.7e-41	46.81	Dirigent protein 20 OS=Arabidopsis thaliana GN=DIR20 PE=2 SV=1	[more]
DIR19_ARATH	5.1e-40	54.97	Dirigent protein 19 OS=Arabidopsis thaliana GN=DIR19 PE=2 SV=1	[more]
DIR7_ARATH	1.7e-38	44.39	Dirigent protein 7 OS=Arabidopsis thaliana GN=DIR7 PE=2 SV=1	[more]
DIR3_ARATH	1.8e-37	45.74	Dirigent protein 3 OS=Arabidopsis thaliana GN=DIR3 PE=3 SV=1	[more]
DIR21_ARATH	6.1e-33	40.53	Dirigent protein 21 OS=Arabidopsis thaliana GN=DIR21 PE=3 SV=1	[more]

BLAST of Cla003180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX42_CUCSA	2.1e-56	61.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280650 PE=4 SV=1	[more]
A0A0A0LUT3_CUCSA	9.1e-52	58.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015830 PE=4 SV=1	[more]
A0A067LIA9_JATCU	5.4e-44	52.17	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19197 PE=4 SV=1	[more]
C6SWG8_SOYBN	9.1e-44	52.08	Uncharacterized protein OS=Glycine max GN=GLYMA_18G207700 PE=2 SV=1	[more]
A0A0B2S632_GLYSO	2.0e-43	52.08	Disease resistance response protein 206 OS=Glycine soja GN=glysoja_001188 PE=4 S...	[more]

BLAST of Cla003180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778693014\|ref\|XP_011653564.1\|	3.0e-56	61.88	PREDICTED: dirigent protein 22-like [Cucumis sativus]	[more]
gi\|659097739\|ref\|XP_008449786.1\|	2.5e-55	62.30	PREDICTED: dirigent protein 22-like [Cucumis melo]	[more]
gi\|659106501\|ref\|XP_008453355.1\|	5.9e-52	58.56	PREDICTED: dirigent protein 22-like [Cucumis melo]	[more]
gi\|449441137\|ref\|XP_004138340.1\|	1.3e-51	58.01	PREDICTED: dirigent protein 22 [Cucumis sativus]	[more]
gi\|1009124090\|ref\|XP_015878884.1\|	4.5e-44	48.68	PREDICTED: dirigent protein 22-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004265	Dirigent

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009699	phenylpropanoid biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0042349	guiding stereospecific synthesis activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU48239	watermelon EST collection version 2.0	transcribed_cluster
WMU60350	watermelon EST collection version 2.0	transcribed_cluster
WMU63310	watermelon EST collection version 2.0	transcribed_cluster
WMU76069	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla003180	Cla003180.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU48239	WMU48239	transcribed_cluster
WMU60350	WMU60350	transcribed_cluster
WMU76069	WMU76069	transcribed_cluster
WMU63310	WMU63310	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004265	Plant disease resistance response protein	PFAM	PF03018	Dirigent	coord: 45..185 score: 1.2
None	No IPR available	PANTHER	PTHR21495	NUCLEOPORIN-RELATED	coord: 1..188 score: 1.3
None	No IPR available	PANTHER	PTHR21495:SF77	DIRIGENT PROTEIN 19	coord: 1..188 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla003180	Cla97C02G050020	Watermelon (97103) v2	wmwmbB316
Cla003180	MELO3C014665	Melon (DHL92) v3.5.1	mewmB419
Cla003180	ClCG02G023870	Watermelon (Charleston Gray)	wcgwmB197
Cla003180	CSPI04G13130	Wild cucumber (PI 183967)	cpiwmB353
Cla003180	Cucsa.153310	Cucumber (Gy14) v1	cgywmB272
Cla003180	CmaCh02G012100	Cucurbita maxima (Rimu)	cmawmB592
Cla003180	CmaCh20G000420	Cucurbita maxima (Rimu)	cmawmB531
Cla003180	CmoCh02G012440	Cucurbita moschata (Rifu)	cmowmB585
Cla003180	CmoCh20G000440	Cucurbita moschata (Rifu)	cmowmB520
Cla003180	Lsi10G009810	Bottle gourd (USVL1VR-Ls)	lsiwmB078
Cla003180	Cp4.1LG16g09090	Cucurbita pepo (Zucchini)	cpewmB287
Cla003180	Cp4.1LG05g05240	Cucurbita pepo (Zucchini)	cpewmB723
Cla003180	CsGy4G012700	Cucumber (Gy14) v2	cgybwmB325
Cla003180	MELO3C014667.2	Melon (DHL92) v3.6.1	medwmB408
Cla003180	Carg06938	Silver-seed gourd	carwmB0520
Cla003180	Carg02747	Silver-seed gourd	carwmB0928
Cla003180	CsaV3_4G023490	Cucumber (Chinese Long) v3	cucwmB364
Cla003180	Bhi10G000331	Wax gourd	wgowmB378

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla003180	Wax gourd	wgowmB636
Cla003180	Watermelon (97103) v1	wmwmB051
Cla003180	Cucumber (Gy14) v1	cgywmB033
Cla003180	Cucumber (Gy14) v1	cgywmB460
Cla003180	Cucurbita moschata (Rifu)	cmowmB861
Cla003180	Melon (DHL92) v3.5.1	mewmB243
Cla003180	Cucumber (Chinese Long) v2	cuwmB347
Cla003180	Cucumber (Chinese Long) v2	cuwmB602
Cla003180	Cucurbita pepo (Zucchini)	cpewmB333
Cla003180	Cucumber (Gy14) v2	cgybwmB323
Cla003180	Melon (DHL92) v3.6.1	medwmB235
Cla003180	Cucumber (Chinese Long) v3	cucwmB631