Cla001765 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001765
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	POT family domain containing protein expressed (AHRD V1 -- D8L9H8_WHEAT); contains Interpro domain(s) IPR007493 Protein of unknown function DUF538
Location	Chr3 : 20984022 .. 20984714 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTTCTCTACAATCCTCTCCCCGTTCTCTCTATTCCTTCTCATTCTCGCCATCTCCACCCAAACCCATCTCTCCTTTTCAACGAGGGATATCACCCTCAAGTCAACTGATATCCACGATCTTCTTCCCCTTTACGGTTTTCCAATCGGTCTCTTACCCAACAATGTCAAGTCCTACATTCTCTCCGACGACGGTAGCTTCGAAATCGAACTCGAAAGCGATTGCTATGTCAAATTCACTGATCTGGTCTACTACGGAAGGCATATCAAGGGCAAATTGAGCTATGGGTCTTTGACCGATGTTTCTGGGATTCAAGTGAAGAAGCTCTTCGCGTGGCTCCCTATTACTGGAATCAAGGTTAATAAAGGCTCTGATTCCATTGAGTTTGCGGTTGGGTTCTTGTCTGAGACTTTGCCGGCCGACCTGTTCCACAGCATTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTCCTGCATGTAGAAGGAAGGCTTGCCTAGAAGGAAAAACAGAGGCAATGTGA

mRNA sequence

ATGGCTTCCTTCTCTACAATCCTCTCCCCGTTCTCTCTATTCCTTCTCATTCTCGCCATCTCCACCCAAACCCATCTCTCCTTTTCAACGAGGGATATCACCCTCAAGTCAACTGATATCCACGATCTTCTTCCCCTTTACGGTTTTCCAATCGGTCTCTTACCCAACAATGTCAAGTCCTACATTCTCTCCGACGACGGTAGCTTCGAAATCGAACTCGAAAGCGATTGCTATGTCAAATTCACTGATCTGGTCTACTACGGAAGGCATATCAAGGGCAAATTGAGCTATGGGTCTTTGACCGATGTTTCTGGGATTCAAGTGAAGAAGCTCTTCGCGTGGCTCCCTATTACTGGAATCAAGGTTAATAAAGGCTCTGATTCCATTGAGTTTGCGGTTGGGTTCTTGTCTGAGACTTTGCCGGCCGACCTGTTCCACAGCATTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTCCTGCATGTAGAAGGAAGGCTTGCCTAGAAGGAAAAACAGAGGCAATGTGA

Coding sequence (CDS)

ATGGCTTCCTTCTCTACAATCCTCTCCCCGTTCTCTCTATTCCTTCTCATTCTCGCCATCTCCACCCAAACCCATCTCTCCTTTTCAACGAGGGATATCACCCTCAAGTCAACTGATATCCACGATCTTCTTCCCCTTTACGGTTTTCCAATCGGTCTCTTACCCAACAATGTCAAGTCCTACATTCTCTCCGACGACGGTAGCTTCGAAATCGAACTCGAAAGCGATTGCTATGTCAAATTCACTGATCTGGTCTACTACGGAAGGCATATCAAGGGCAAATTGAGCTATGGGTCTTTGACCGATGTTTCTGGGATTCAAGTGAAGAAGCTCTTCGCGTGGCTCCCTATTACTGGAATCAAGGTTAATAAAGGCTCTGATTCCATTGAGTTTGCGGTTGGGTTCTTGTCTGAGACTTTGCCGGCCGACCTGTTCCACAGCATTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTCCTGCATGTAGAAGGAAGGCTTGCCTAGAAGGAAAAACAGAGGCAATGTGA

Protein sequence

MASFSTILSPFSLFLLILAISTQTHLSFSTRDITLKSTDIHDLLPLYGFPIGLLPNNVKSYILSDDGSFEIELESDCYVKFTDLVYYGRHIKGKLSYGSLTDVSGIQVKKLFAWLPITGIKVNKGSDSIEFAVGFLSETLPADLFHSIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPACRRKACLEGKTEAM

Homology

[Close]

BLAST of Cla001765 vs. TrEMBL
Match: A0A0A0M0C4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G630320 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.2e-59
Identity = 117/149 (78.52%), Postives = 130/149 (87.25%), Query Frame = 1


Query: 1   MASFSTILSPFSLFLLILAISTQTHLSFSTRDITLKSTDIHDLLPLYGFPIGLLPNNVKS 60
           MASFSTILSPFSLFLLIL  STQTHLSFS RD  L+S+DIHDLLPLYGFP+GLLP+NV S
Sbjct: 1   MASFSTILSPFSLFLLILLFSTQTHLSFSARDFPLRSSDIHDLLPLYGFPVGLLPDNVNS 60

Query: 61  YILSDDGSFEIELESDCYVKFTDLVYYGRHIKGKLSYGSLTDVSGIQVKKLFAWLPITGI 120
           Y LSDDG+FEI+L+S CYV F+DLVYYG++IKGKLS  SL+DVSGI+VKKLFAWLPITGI
Sbjct: 61  YTLSDDGTFEIQLQSSCYVHFSDLVYYGKNIKGKLSNRSLSDVSGIEVKKLFAWLPITGI 120

Query: 121 KVNKGSDSIEFAVGFLSETLPADLFHSIP 150
           KV   S SIEFAVGFLSE LP  +F SIP
Sbjct: 121 KVTPDSKSIEFAVGFLSEILPVSMFESIP 149

[Close]

BLAST of Cla001765 vs. TrEMBL
Match: A0A0A0M0C4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G630320 PE=4 SV=1)

HSP 1 Score: 38.1 bits (87), Expect = 1.7e+01
Identity = 16/17 (94.12%), Postives = 16/17 (94.12%), Query Frame = 1


Query: 214 IPACRRKACLEGKTEAM 231
           IP CRRKACLEGKTEAM
Sbjct: 148 IPTCRRKACLEGKTEAM 164

HSP 2 Score: 180.6 bits (457), Expect = 2.1e-42
Identity = 90/153 (58.82%), Postives = 112/153 (73.20%), Query Frame = 1


Query: 5   STILSPFSLFLLILAISTQTHLSFST--------RDITLKSTDIHDLLPLYGFPIGLLPN 64
           S + +P SL+LL+LA+  QTHLSFST        R +++ ++D+HDLLP YG P G+LPN
Sbjct: 61  SKMAAPISLYLLLLALFCQTHLSFSTTGPAIDHSRPLSISTSDVHDLLPTYGLPKGILPN 120

Query: 65  NVKSYILSDDGSFEIELESDCYVKFTDLVYYGRHIKGKLSYGSLTDVSGIQVKKLFAWLP 124
           NVKSY LS  G F IELES CYV+F  LVYY + IKGKLSYG++ DVSGIQ KKLF WLP
Sbjct: 121 NVKSYTLSTTGDFTIELESTCYVQFDQLVYYEKKIKGKLSYGAVHDVSGIQAKKLFLWLP 180

Query: 125 ITGIKVNKGSDSIEFAVGFLSETLPADLFHSIP 150
           +TGI+V++ S  ++F VG LSE LPA  F  IP
Sbjct: 181 VTGIEVDENSGMVQFFVGALSEKLPAKQFEDIP 213

[Close]

BLAST of Cla001765 vs. TrEMBL
Match: A0A061GR70_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_040161 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.7e-42
Identity = 89/149 (59.73%), Postives = 110/149 (73.83%), Query Frame = 1


Query: 9   SPFSLFLLILAISTQTHLSFST--------RDITLKSTDIHDLLPLYGFPIGLLPNNVKS 68
           +P SL+LL+LA+  QTHLSFST        R +++ ++D+HDLLP YG P G+LPNNVKS
Sbjct: 3   APISLYLLLLALFCQTHLSFSTTGPAIDHSRPLSISTSDVHDLLPTYGLPKGILPNNVKS 62

Query: 69  YILSDDGSFEIELESDCYVKFTDLVYYGRHIKGKLSYGSLTDVSGIQVKKLFAWLPITGI 128
           Y LS  G F IELES CYV+F  LVYY + IKGKLSYG++ DVSGIQ KKLF WLP+TGI
Sbjct: 63  YTLSTTGDFTIELESTCYVQFDQLVYYEKKIKGKLSYGAVHDVSGIQAKKLFLWLPVTGI 122

Query: 129 KVNKGSDSIEFAVGFLSETLPADLFHSIP 150
           +V++ S  ++F VG LSE LPA  F  IP
Sbjct: 123 EVDENSGMVQFFVGALSEKLPAKQFEDIP 151

[Close]

BLAST of Cla001765 vs. TrEMBL
Match: M5W1G2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012400mg PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 6.8e-41
Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 1


Query: 8   LSPFSLFLLILAISTQTHLSFSTRDI---------TLKS-TDIHDLLPLYGFPIGLLPNN 67
           ++  S +LLIL   ++TH   S RD+         T +S TD+HDLLP YG P GLLP+N
Sbjct: 5   IAQISFYLLILTFFSETHFGLSLRDLKSDPNRPSTTAQSITDVHDLLPKYGLPKGLLPDN 64

Query: 68  VKSYILSDDGSFEIELESDCYVKFTDLVYYGRHIKGKLSYGSLTDVSGIQVKKLFAWLPI 127
           V SY LS+DGSFEI LES CYV F  LVYY ++IKGKLSYGS++DVSGIQ KKLF W+ +
Sbjct: 65  VNSYTLSEDGSFEIYLESPCYVHFDQLVYYNKNIKGKLSYGSVSDVSGIQAKKLFIWVSV 124

Query: 128 TGIKVNKGSDSIEFAVGFLSETLPADLFHSIP 150
           TGI+V++GSDS+EF VG LSE LPA  F  IP
Sbjct: 125 TGIQVDQGSDSVEFYVGALSEKLPAKQFEDIP 156

[Close]

BLAST of Cla001765 vs. TrEMBL
Match: A0A067JSR8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21025 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-36
Identity = 83/147 (56.46%), Postives = 101/147 (68.71%), Query Frame = 1


Query: 12  SLFLLILAISTQTHLSFSTRDITLKST---------DIHDLLPLYGFPIGLLPNNVKSYI 71
           SL+LL L   ++THLS S  D +L            D+HDLLPL+G P GLLP+NVKSY 
Sbjct: 9   SLYLLSLFFLSKTHLSLSLTDPSLNRDRLPLPQSILDVHDLLPLFGLPRGLLPDNVKSYT 68

Query: 72  LSDDGSFEIELESDCYVKFTDLVYYGRHIKGKLSYGSLTDVSGIQVKKLFAWLPITGIKV 131
           LS  GSF ++L+S CYV F  LVYY   IKGKLSYG++ DVSGIQ KKLF WLP++GI+V
Sbjct: 69  LSPSGSFTVQLKSTCYVHFDQLVYYAEEIKGKLSYGAVHDVSGIQAKKLFIWLPVSGIEV 128

Query: 132 NKGSDSIEFAVGFLSETLPADLFHSIP 150
           ++  D IEF VG LS+ LPA  F  IP
Sbjct: 129 SRDDDMIEFFVGSLSQKLPAKQFEDIP 155

[Close]

BLAST of Cla001765 vs. NCBI nr
Match: gi|659098800|ref|XP_008450299.1| (PREDICTED: uncharacterized protein LOC103491951 [Cucumis melo])

HSP 1 Score: 241.5 bits (615), Expect = 1.4e-60
Identity = 120/149 (80.54%), Postives = 131/149 (87.92%), Query Frame = 1


Query: 1   MASFSTILSPFSLFLLILAISTQTHLSFSTRDITLKSTDIHDLLPLYGFPIGLLPNNVKS 60
           MASFS ILSPFSLFLLIL ISTQTHLSFS RD+ LKS+DIHDLLPLYGFP+GLLP+NVKS
Sbjct: 1   MASFSRILSPFSLFLLILVISTQTHLSFSARDLLLKSSDIHDLLPLYGFPVGLLPSNVKS 60

Query: 61  YILSDDGSFEIELESDCYVKFTDLVYYGRHIKGKLSYGSLTDVSGIQVKKLFAWLPITGI 120
           Y LSDDGSF IEL+S CYV+F DLVYYG+ IKGKLSYGSL+DVSGIQVKKLFAWLPITG+
Sbjct: 61  YTLSDDGSFVIELDSACYVQFADLVYYGKTIKGKLSYGSLSDVSGIQVKKLFAWLPITGM 120

Query: 121 KVNKGSDSIEFAVGFLSETLPADLFHSIP 150
           +V   S SIEF VGFLSE LP  +F SIP
Sbjct: 121 RVTSDSKSIEFQVGFLSEALPFSMFESIP 149

[Close]

BLAST of Cla001765 vs. NCBI nr
Match: gi|659098800|ref|XP_008450299.1| (PREDICTED: uncharacterized protein LOC103491951 [Cucumis melo])

HSP 1 Score: 35.4 bits (80), Expect = 1.6e+02
Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = 1


Query: 214 IPACRRKACLEGKTEAM 231
           IP CR+KACLEGKTEA+
Sbjct: 148 IPTCRKKACLEGKTEAV 164

HSP 2 Score: 236.5 bits (602), Expect = 4.6e-59
Identity = 117/149 (78.52%), Postives = 130/149 (87.25%), Query Frame = 1


Query: 1   MASFSTILSPFSLFLLILAISTQTHLSFSTRDITLKSTDIHDLLPLYGFPIGLLPNNVKS 60
           MASFSTILSPFSLFLLIL  STQTHLSFS RD  L+S+DIHDLLPLYGFP+GLLP+NV S
Sbjct: 1   MASFSTILSPFSLFLLILLFSTQTHLSFSARDFPLRSSDIHDLLPLYGFPVGLLPDNVNS 60

Query: 61  YILSDDGSFEIELESDCYVKFTDLVYYGRHIKGKLSYGSLTDVSGIQVKKLFAWLPITGI 120
           Y LSDDG+FEI+L+S CYV F+DLVYYG++IKGKLS  SL+DVSGI+VKKLFAWLPITGI
Sbjct: 61  YTLSDDGTFEIQLQSSCYVHFSDLVYYGKNIKGKLSNRSLSDVSGIEVKKLFAWLPITGI 120

Query: 121 KVNKGSDSIEFAVGFLSETLPADLFHSIP 150
           KV   S SIEFAVGFLSE LP  +F SIP
Sbjct: 121 KVTPDSKSIEFAVGFLSEILPVSMFESIP 149

[Close]

BLAST of Cla001765 vs. NCBI nr
Match: gi|449442610|ref|XP_004139074.1| (PREDICTED: uncharacterized protein LOC101202755 [Cucumis sativus])

HSP 1 Score: 38.1 bits (87), Expect = 2.4e+01
Identity = 16/17 (94.12%), Postives = 16/17 (94.12%), Query Frame = 1


Query: 214 IPACRRKACLEGKTEAM 231
           IP CRRKACLEGKTEAM
Sbjct: 148 IPTCRRKACLEGKTEAM 164

HSP 2 Score: 180.6 bits (457), Expect = 3.0e-42
Identity = 90/153 (58.82%), Postives = 112/153 (73.20%), Query Frame = 1


Query: 5   STILSPFSLFLLILAISTQTHLSFST--------RDITLKSTDIHDLLPLYGFPIGLLPN 64
           S + +P SL+LL+LA+  QTHLSFST        R +++ ++D+HDLLP YG P G+LPN
Sbjct: 61  SKMAAPISLYLLLLALFCQTHLSFSTTGPAIDHSRPLSISTSDVHDLLPTYGLPKGILPN 120

Query: 65  NVKSYILSDDGSFEIELESDCYVKFTDLVYYGRHIKGKLSYGSLTDVSGIQVKKLFAWLP 124
           NVKSY LS  G F IELES CYV+F  LVYY + IKGKLSYG++ DVSGIQ KKLF WLP
Sbjct: 121 NVKSYTLSTTGDFTIELESTCYVQFDQLVYYEKKIKGKLSYGAVHDVSGIQAKKLFLWLP 180

Query: 125 ITGIKVNKGSDSIEFAVGFLSETLPADLFHSIP 150
           +TGI+V++ S  ++F VG LSE LPA  F  IP
Sbjct: 181 VTGIEVDENSGMVQFFVGALSEKLPAKQFEDIP 213

[Close]

BLAST of Cla001765 vs. NCBI nr
Match: gi|590582789|ref|XP_007014721.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 179.5 bits (454), Expect = 6.7e-42
Identity = 89/149 (59.73%), Postives = 110/149 (73.83%), Query Frame = 1


Query: 9   SPFSLFLLILAISTQTHLSFST--------RDITLKSTDIHDLLPLYGFPIGLLPNNVKS 68
           +P SL+LL+LA+  QTHLSFST        R +++ ++D+HDLLP YG P G+LPNNVKS
Sbjct: 3   APISLYLLLLALFCQTHLSFSTTGPAIDHSRPLSISTSDVHDLLPTYGLPKGILPNNVKS 62

Query: 69  YILSDDGSFEIELESDCYVKFTDLVYYGRHIKGKLSYGSLTDVSGIQVKKLFAWLPITGI 128
           Y LS  G F IELES CYV+F  LVYY + IKGKLSYG++ DVSGIQ KKLF WLP+TGI
Sbjct: 63  YTLSTTGDFTIELESTCYVQFDQLVYYEKKIKGKLSYGAVHDVSGIQAKKLFLWLPVTGI 122

Query: 129 KVNKGSDSIEFAVGFLSETLPADLFHSIP 150
           +V++ S  ++F VG LSE LPA  F  IP
Sbjct: 123 EVDENSGMVQFFVGALSEKLPAKQFEDIP 151

[Close]

BLAST of Cla001765 vs. NCBI nr
Match: gi|657951224|ref|XP_008351693.1| (PREDICTED: uncharacterized protein LOC103415116 [Malus domestica])

HSP 1 Score: 177.6 bits (449), Expect = 2.6e-41
Identity = 95/159 (59.75%), Postives = 114/159 (71.70%), Query Frame = 1


Query: 1   MASFSTILSPFSLFLLILAISTQTHLSFSTRDI---------TLKS-TDIHDLLPLYGFP 60
           MAS S   +  SL+LL+L + ++THL+ S RD+         T +S  D+HDLLP YG P
Sbjct: 1   MASAS---AQISLYLLLLTLFSKTHLTLSLRDLKPNPNGSSNTSQSIADVHDLLPQYGLP 60

Query: 61  IGLLPNNVKSYILSDDGSFEIELESDCYVKFTDLVYYGRHIKGKLSYGSLTDVSGIQVKK 120
            GLLPNNVKSY L++DGSFEI LES CYV F  LVYY +HIKGKLSYG ++DVSGIQ KK
Sbjct: 61  KGLLPNNVKSYTLTEDGSFEIFLESPCYVHFDQLVYYNKHIKGKLSYGEVSDVSGIQAKK 120

Query: 121 LFAWLPITGIKVNKGSDSIEFAVGFLSETLPADLFHSIP 150
           LF W+ +TGI  +KGSDS+EF VG LSE LPA  F  IP
Sbjct: 121 LFIWVSVTGIHRDKGSDSVEFYVGALSEKLPAKQFEDIP 156

The following BLAST results are available for this feature:

BLAST of Cla001765 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0C4_CUCSA	3.2e-59	78.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G630320 PE=4 SV=1	[more]
A0A0A0M0C4_CUCSA	1.7e+01	94.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G630320 PE=4 SV=1	[more]
A0A061GR70_THECC	4.7e-42	59.73	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_040161 PE=4 SV=1	[more]
M5W1G2_PRUPE	6.8e-41	59.21	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012400mg PE=4 SV=1	[more]
A0A067JSR8_JATCU	1.3e-36	56.46	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21025 PE=4 SV=1	[more]

BLAST of Cla001765 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098800\|ref\|XP_008450299.1\|	1.4e-60	80.54	PREDICTED: uncharacterized protein LOC103491951 [Cucumis melo]	[more]
gi\|659098800\|ref\|XP_008450299.1\|	1.6e+02	82.35	PREDICTED: uncharacterized protein LOC103491951 [Cucumis melo]	[more]
gi\|449442610\|ref\|XP_004139074.1\|	2.4e+01	94.12	PREDICTED: uncharacterized protein LOC101202755 [Cucumis sativus]	[more]
gi\|590582789\|ref\|XP_007014721.1\|	6.7e-42	59.73	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|657951224\|ref\|XP_008351693.1\|	2.6e-41	59.75	PREDICTED: uncharacterized protein LOC103415116 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU06675	watermelon EST collection version 2.0	transcribed_cluster
WMU23835	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU34208	watermelon EST collection version 2.0	transcribed_cluster
WMU37956	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU39246	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU74821	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001765	Cla001765.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU23835	WMU23835	transcribed_cluster
WMU34208	WMU34208	transcribed_cluster
WMU37956	WMU37956	transcribed_cluster
WMU39246	WMU39246	transcribed_cluster
WMU06675	WMU06675	transcribed_cluster
WMU74821	WMU74821	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 35..150 score: 1.6
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 41..145 score: 1.1
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 16..150 score: 8.63
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 7..149 score: 8.0
None	No IPR available	PANTHER	PTHR31676:SF6	SUBFAMILY NOT NAMED	coord: 7..149 score: 8.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla001765	Cla97C03G062220	Watermelon (97103) v2	wmwmbB129
Cla001765	ClCG03G012060	Watermelon (Charleston Gray)	wcgwmB230
Cla001765	Lsi06G006350	Bottle gourd (USVL1VR-Ls)	lsiwmB393

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla001765	Silver-seed gourd	carwmB0532
Cla001765	Silver-seed gourd	carwmB0912
Cla001765	Silver-seed gourd	carwmB0971
Cla001765	Cucumber (Chinese Long) v3	cucwmB021
Cla001765	Watermelon (97103) v2	wmwmbB128
Cla001765	Wax gourd	wgowmB662
Cla001765	Cucumber (Gy14) v1	cgywmB639
Cla001765	Cucurbita maxima (Rimu)	cmawmB054
Cla001765	Cucurbita maxima (Rimu)	cmawmB096
Cla001765	Cucurbita moschata (Rifu)	cmowmB046
Cla001765	Cucurbita moschata (Rifu)	cmowmB086
Cla001765	Watermelon (Charleston Gray)	wcgwmB228
Cla001765	Cucumber (Chinese Long) v2	cuwmB016
Cla001765	Cucurbita pepo (Zucchini)	cpewmB353
Cla001765	Bottle gourd (USVL1VR-Ls)	lsiwmB398
Cla001765	Cucumber (Gy14) v2	cgybwmB018