Cla001628 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001628
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Pathogenesis-related protein 1 (AHRD V1 ***- E2GEV6_9ROSI); contains Interpro domain(s) IPR001283 Allergen V5/Tpx-1 related
Location	Chr2 : 8372735 .. 8373217 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCCCACCATTTTTTTCTCTACCATATGTTTGGTAGGTTTCCTCCTTGCTACCATCTCCAAGGCCCAAAACGATCCCCAAGACTTTGTCGATACCCATAACGTCATTCGAGCAGCGGTTGGTGTCGGGCCAGTCTCTTGGGATGACACTCTAGCCACCTATGCTCAAAATTACGCTGATAGTAAGATCGATACCTGTGAGATGGAGCACTCCAATGGACCCTACGGTGAAAACCTCGCAGAGGGGTATGACGAGATGACGGCGGTGGAGGCGGTGAAGTTTTGGGCGACCGAGAAAAAGTTCTACAACCACCATTTGAACCGGTGCATCGGGGATGAGTGTGGCCACTATACGCAAATAGTGTGGAGGGACACTAAAAACATAGGGTGTGCTAGGGTGAAGTGTGAGAACAATTGGGTTTTTGTGATATGCAACTATAATCCTCCGGGGAACTATATAGGCCAACATCCTTACTAA

mRNA sequence

ATGGCTTCCCCCACCATTTTTTTCTCTACCATATGTTTGGTAGGTTTCCTCCTTGCTACCATCTCCAAGGCCCAAAACGATCCCCAAGACTTTGTCGATACCCATAACGTCATTCGAGCAGCGGTTGGTGTCGGGCCAGTCTCTTGGGATGACACTCTAGCCACCTATGCTCAAAATTACGCTGATAGTAAGATCGATACCTGTGAGATGGAGCACTCCAATGGACCCTACGGTGAAAACCTCGCAGAGGGGTATGACGAGATGACGGCGGTGGAGGCGGTGAAGTTTTGGGCGACCGAGAAAAAGTTCTACAACCACCATTTGAACCGGTGCATCGGGGATGAGTGTGGCCACTATACGCAAATAGTGTGGAGGGACACTAAAAACATAGGGTGTGCTAGGGTGAAGTGTGAGAACAATTGGGTTTTTGTGATATGCAACTATAATCCTCCGGGGAACTATATAGGCCAACATCCTTACTAA

Coding sequence (CDS)

ATGGCTTCCCCCACCATTTTTTTCTCTACCATATGTTTGGTAGGTTTCCTCCTTGCTACCATCTCCAAGGCCCAAAACGATCCCCAAGACTTTGTCGATACCCATAACGTCATTCGAGCAGCGGTTGGTGTCGGGCCAGTCTCTTGGGATGACACTCTAGCCACCTATGCTCAAAATTACGCTGATAGTAAGATCGATACCTGTGAGATGGAGCACTCCAATGGACCCTACGGTGAAAACCTCGCAGAGGGGTATGACGAGATGACGGCGGTGGAGGCGGTGAAGTTTTGGGCGACCGAGAAAAAGTTCTACAACCACCATTTGAACCGGTGCATCGGGGATGAGTGTGGCCACTATACGCAAATAGTGTGGAGGGACACTAAAAACATAGGGTGTGCTAGGGTGAAGTGTGAGAACAATTGGGTTTTTGTGATATGCAACTATAATCCTCCGGGGAACTATATAGGCCAACATCCTTACTAA

Protein sequence

MASPTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYTQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY

Homology

[Close]

BLAST of Cla001628 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.0e-49
Identity = 85/157 (54.14%), Postives = 112/157 (71.34%), Query Frame = 1


Query: 7   FFSTI--CLVGF-LLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADS 66
           F +TI  C + F +L   SKAQN PQD+++ HN  R  VGVGP++WD+ LA YAQNYA+ 
Sbjct: 3   FLTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQ 62

Query: 67  KIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYTQIV 126
           +I  C M HS+GPYGENLA  + ++ A  AVK W  EK+FY+++ N C+G  CGHYTQ+V
Sbjct: 63  RIGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVV 122

Query: 127 WRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           WR++  +GCARV+  N W F+ CNY+PPGN+IGQ P+
Sbjct: 123 WRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cla001628 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-44
Identity = 76/145 (52.41%), Postives = 102/145 (70.34%), Query Frame = 1


Query: 12  CLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDTCEME 71
           C + F++   S+AQ   ++F++ HN  R  VGVGP++WDD LA YAQNYA+ + D C M 
Sbjct: 9   CFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMI 68

Query: 72  HSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCI-GDECGHYTQIVWRDTKNI 131
           HS+GPYGENLA  + ++ A  AVK W  EK++Y+++ N C  G  CGHYTQ+VWR +  +
Sbjct: 69  HSDGPYGENLAAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRL 128

Query: 132 GCARVKCENNWVFVICNYNPPGNYI 156
           GCARV+C + WVF+ CNY+PPGNYI
Sbjct: 129 GCARVRCNSGWVFITCNYDPPGNYI 153

[Close]

BLAST of Cla001628 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.9e-43
Identity = 81/159 (50.94%), Postives = 104/159 (65.41%), Query Frame = 1


Query: 4   PTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADS 63
           P+ F  +  L+  +++  S AQN  QD++D HN  RA VGV P++WD+ +A YAQNY   
Sbjct: 10  PSFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQ 69

Query: 64  KIDTCEMEHSNGPYGENLAEGY-DEMTAVEAVKFWATEKKFYNHHLNRCI-GDECGHYTQ 123
               C + HS+G YGENLA+G  D MTA +AV+ W  EK++Y+H  N C  G  CGHYTQ
Sbjct: 70  LAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQ 129

Query: 124 IVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           +VWR++  +GCARVKC N    V CNY+PPGN IGQ PY
Sbjct: 130 VVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Cla001628 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.2e-43
Identity = 80/159 (50.31%), Postives = 104/159 (65.41%), Query Frame = 1


Query: 4   PTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADS 63
           P+    +  L+  +++   +AQN  QD++D HN  RA VGV P++WDD +A YAQNYA  
Sbjct: 10  PSFLLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQ 69

Query: 64  KIDTCEMEHSNGPYGENLAEGY-DEMTAVEAVKFWATEKKFYNHHLNRCI-GDECGHYTQ 123
               C + HS+G YGENLAEG  D MTA +AV+ W  EK++Y+H  N C  G  CGHYTQ
Sbjct: 70  LAADCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQ 129

Query: 124 IVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           +VWR++  +GCARV+C N    V CNY+PPGNY G+ PY
Sbjct: 130 VVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Cla001628 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.7e-42
Identity = 79/153 (51.63%), Postives = 100/153 (65.36%), Query Frame = 1


Query: 11  ICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDTCEM 70
           +C+V  ++   S AQN PQD+VD HN  R+AV VGPV+WD+++A +A+ YA S+   C +
Sbjct: 15  VCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRL 74

Query: 71  EHSNGP-YGENLAEGYD-EMTAVEAVKFWATEKKFYNHHLNRCI-GDECGHYTQIVWRDT 130
            HS  P YGENLA G   E+T   AV  W  E+  YN + N C  G  CGHYTQ+VWR++
Sbjct: 75  VHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNS 134

Query: 131 KNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
             IGCARV+C N   F+ CNY+PPGNY GQ PY
Sbjct: 135 VRIGCARVRCNNGAWFITCNYSPPGNYAGQRPY 167

[Close]

BLAST of Cla001628 vs. TrEMBL
Match: A0A0A0K6A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 2.3e-80
Identity = 142/161 (88.20%), Postives = 146/161 (90.68%), Query Frame = 1


Query: 1   MASPTIFFSTICLVGFLLAT-ISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQN 60
           M S TI  STI LV FLLAT IS AQN PQDFVDTHN IRAAVGVGPVSWDDTLA YAQ+
Sbjct: 1   MVSSTIIPSTIFLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQS 60

Query: 61  YADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHY 120
           YADSK+DTCEMEHSNGPYGENLAEGYDEMT VEAV+FWATEKKFYNHHLNRC+GDECGHY
Sbjct: 61  YADSKMDTCEMEHSNGPYGENLAEGYDEMTGVEAVRFWATEKKFYNHHLNRCVGDECGHY 120

Query: 121 TQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           TQIVWR T NIGC RVKCENNWVFVICNYNPPGNYIGQHPY
Sbjct: 121 TQIVWRHTTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 161

[Close]

BLAST of Cla001628 vs. TrEMBL
Match: A0A0A0K4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 7.5e-63
Identity = 110/162 (67.90%), Postives = 130/162 (80.25%), Query Frame = 1


Query: 1   MASPTIFFSTICLVGFL--LATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQ 60
           M SP +   +  ++G +  LA+I+ AQN  QDFV+ HN  RA VGVGPVSW+ TLA YAQ
Sbjct: 1   MPSPKLLLISFMMMGLITQLASITLAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQ 60

Query: 61  NYADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGH 120
            YA+ KI TCEM+HS GPYGENLAEGY EMTAVEAV FW +EKK+Y+HH NRCIGDEC H
Sbjct: 61  TYANKKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRH 120

Query: 121 YTQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           YTQ+VWR TK++GCARVKC NNW+FVICNY+PP NY+GQ PY
Sbjct: 121 YTQVVWRGTKHVGCARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]

BLAST of Cla001628 vs. TrEMBL
Match: V7BUQ0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G197500g PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 9.2e-53
Identity = 90/141 (63.83%), Postives = 111/141 (78.72%), Query Frame = 1


Query: 20  TISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDTCEMEHSNGPYGE 79
           T+S AQN PQD+V+ HN  RA VGVGP+SW+ TL  YAQ YA+ +I  C +EHS GPYGE
Sbjct: 17  TVSLAQNSPQDYVEVHNQARAEVGVGPISWNHTLEAYAQRYANKRIPDCNLEHSMGPYGE 76

Query: 80  NLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYTQIVWRDTKNIGCARVKCEN 139
           NLAEGY EM   +AVKFW TEK +Y++  N+C+ DECGHYTQIVWRD+ N+GCAR KC+N
Sbjct: 77  NLAEGYGEMKGSDAVKFWLTEKPYYDYKSNKCVHDECGHYTQIVWRDSVNLGCARAKCKN 136

Query: 140 NWVFVICNYNPPGNYIGQHPY 161
            W+FVIC+Y+PPGN  G+ PY
Sbjct: 137 GWMFVICSYSPPGNVEGERPY 157

[Close]

BLAST of Cla001628 vs. TrEMBL
Match: A0A0B2QGZ3_GLYSO (Basic form of pathogenesis-related protein 1 OS=Glycine soja GN=glysoja_029914 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 5.9e-52
Identity = 93/160 (58.13%), Postives = 116/160 (72.50%), Query Frame = 1


Query: 1   MASPTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNY 60
           M+   +  S   LV      +S AQN PQDF+D HN  RA VGVGP+SW+ TL  YAQ+Y
Sbjct: 1   MSPCNVILSIFFLVCTRTPLLSLAQNTPQDFLDVHNQARAEVGVGPLSWNHTLQAYAQSY 60

Query: 61  ADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYT 120
           A+ +I  C +EHS GP+GEN+AEGY EM   +AVKFW TEK +Y+HH N C+ DEC HYT
Sbjct: 61  ANKRIPDCNLEHSMGPFGENIAEGYAEMKGSDAVKFWLTEKPYYDHHSNACVHDECLHYT 120

Query: 121 QIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           QIVWRD+ ++GCAR KC N+WVFVIC+Y+PPGN  G+ PY
Sbjct: 121 QIVWRDSVHLGCARAKCNNDWVFVICSYSPPGNIEGERPY 160

[Close]

BLAST of Cla001628 vs. TrEMBL
Match: C6SY84_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G252600 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.0e-51
Identity = 94/161 (58.39%), Postives = 117/161 (72.67%), Query Frame = 1


Query: 1   MASP-TIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQN 60
           M SP  +  S   LV      +S AQN PQDF+D HN  RA VGVGP+SW+ TL  YAQ+
Sbjct: 1   MMSPCNVILSIFFLVCTRTPLLSLAQNTPQDFLDVHNQARAEVGVGPLSWNHTLQAYAQS 60

Query: 61  YADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHY 120
           YA+ +I  C +EHS GP+GEN++EGY EM   +AVKFW TEK +Y+HH N C+ DEC HY
Sbjct: 61  YANKRIPDCNLEHSMGPFGENISEGYAEMKGSDAVKFWLTEKPYYDHHSNACVHDECLHY 120

Query: 121 TQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           TQIVWRD+ ++GCAR KC N+WVFVIC+Y+PPGN  G+ PY
Sbjct: 121 TQIVWRDSVHLGCARAKCNNDWVFVICSYSPPGNIEGERPY 161

[Close]

BLAST of Cla001628 vs. NCBI nr
Match: gi|659110137|ref|XP_008455068.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-81
Identity = 143/161 (88.82%), Postives = 147/161 (91.30%), Query Frame = 1


Query: 1   MASPTIFFSTICLVGFLLAT-ISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQN 60
           ++S  I  STICLV FLLAT IS AQN PQDFVDTHN IRAAVGVGPVSWDDTLA YAQ+
Sbjct: 2   VSSTIIILSTICLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQS 61

Query: 61  YADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHY 120
           YADSKIDTCEMEHSNGPYGENLAEGYDEMT VEAVKFWATEKKFYNHHLNRC+GDECGHY
Sbjct: 62  YADSKIDTCEMEHSNGPYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGDECGHY 121

Query: 121 TQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           TQIVWR T NIGC RVKCENNWVFVICNYNPPGNYIGQHPY
Sbjct: 122 TQIVWRHTTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 162

[Close]

BLAST of Cla001628 vs. NCBI nr
Match: gi|449438291|ref|XP_004136922.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 3.3e-80
Identity = 142/161 (88.20%), Postives = 146/161 (90.68%), Query Frame = 1


Query: 1   MASPTIFFSTICLVGFLLAT-ISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQN 60
           M S TI  STI LV FLLAT IS AQN PQDFVDTHN IRAAVGVGPVSWDDTLA YAQ+
Sbjct: 1   MVSSTIIPSTIFLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQS 60

Query: 61  YADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHY 120
           YADSK+DTCEMEHSNGPYGENLAEGYDEMT VEAV+FWATEKKFYNHHLNRC+GDECGHY
Sbjct: 61  YADSKMDTCEMEHSNGPYGENLAEGYDEMTGVEAVRFWATEKKFYNHHLNRCVGDECGHY 120

Query: 121 TQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           TQIVWR T NIGC RVKCENNWVFVICNYNPPGNYIGQHPY
Sbjct: 121 TQIVWRHTTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 161

[Close]

BLAST of Cla001628 vs. NCBI nr
Match: gi|449438289|ref|XP_004136921.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 1.1e-62
Identity = 110/162 (67.90%), Postives = 130/162 (80.25%), Query Frame = 1


Query: 1   MASPTIFFSTICLVGFL--LATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQ 60
           M SP +   +  ++G +  LA+I+ AQN  QDFV+ HN  RA VGVGPVSW+ TLA YAQ
Sbjct: 1   MPSPKLLLISFMMMGLITQLASITLAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQ 60

Query: 61  NYADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGH 120
            YA+ KI TCEM+HS GPYGENLAEGY EMTAVEAV FW +EKK+Y+HH NRCIGDEC H
Sbjct: 61  TYANKKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRH 120

Query: 121 YTQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           YTQ+VWR TK++GCARVKC NNW+FVICNY+PP NY+GQ PY
Sbjct: 121 YTQVVWRGTKHVGCARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]

BLAST of Cla001628 vs. NCBI nr
Match: gi|659110143|ref|XP_008455071.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 246.9 bits (629), Expect = 2.4e-62
Identity = 110/161 (68.32%), Postives = 129/161 (80.12%), Query Frame = 1


Query: 1   MASPTIFFSTICLVGFL-LATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQN 60
           M  P +   +  ++G + LA I+ AQN  QDFV+ HN  RA VGVGPVSW+ TLA YAQ 
Sbjct: 1   MPLPKLLLISFMMMGLITLAPITLAQNSHQDFVNAHNNARAKVGVGPVSWNYTLAAYAQT 60

Query: 61  YADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHY 120
           YA+ KI TCEM+HS GPYGENLAEGY EMTAVEAV FW +EKK+Y+HH NRCIGDEC HY
Sbjct: 61  YANKKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHY 120

Query: 121 TQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           TQ+VWR TK++GCARVKC NNW+FVICNY+PPGNY+GQ PY
Sbjct: 121 TQVVWRGTKHVGCARVKCHNNWIFVICNYDPPGNYVGQFPY 161

[Close]

BLAST of Cla001628 vs. NCBI nr
Match: gi|645261138|ref|XP_008236150.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Prunus mume])

HSP 1 Score: 220.3 bits (560), Expect = 2.4e-54
Identity = 99/161 (61.49%), Postives = 124/161 (77.02%), Query Frame = 1


Query: 10  TICLVGFLLAT-ISKAQ---------NDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQN 69
           +IC +  LLA  +S A+         N  QDFVD HN  RAAVGVGPV W++T+A YAQN
Sbjct: 9   SICSIALLLAAQVSLARKVGYAPNPSNPHQDFVDEHNRARAAVGVGPVRWNNTVAAYAQN 68

Query: 70  YADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHY 129
           YA+++I  C+MEHS GPYGENLAEGY EMT  +AVKFW TEK  Y++  N+C+GDECGHY
Sbjct: 69  YANTRIRGCDMEHSGGPYGENLAEGYGEMTGAQAVKFWVTEKPNYDYGSNKCVGDECGHY 128

Query: 130 TQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           TQ+VWR++ ++GCAR KC+NNWVFVIC+Y+PPGNY G+ PY
Sbjct: 129 TQVVWRNSVHLGCARAKCDNNWVFVICSYDPPGNYEGERPY 169

The following BLAST results are available for this feature:

BLAST of Cla001628 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	1.0e-49	54.14	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1A_SOLLC	1.7e-44	52.41	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR1B_TOBAC	1.9e-43	50.94	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PR1A_TOBAC	3.2e-43	50.31	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR1_SAMNI	2.7e-42	51.63	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]

BLAST of Cla001628 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6A0_CUCSA	2.3e-80	88.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1	[more]
A0A0A0K4C1_CUCSA	7.5e-63	67.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1	[more]
V7BUQ0_PHAVU	9.2e-53	63.83	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G197500g PE=3 SV=1	[more]
A0A0B2QGZ3_GLYSO	5.9e-52	58.13	Basic form of pathogenesis-related protein 1 OS=Glycine soja GN=glysoja_029914 P...	[more]
C6SY84_SOYBN	1.0e-51	58.39	Uncharacterized protein OS=Glycine max GN=GLYMA_13G252600 PE=2 SV=1	[more]

BLAST of Cla001628 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110137\|ref\|XP_008455068.1\|	1.3e-81	88.82	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|449438291\|ref\|XP_004136922.1\|	3.3e-80	88.20	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|449438289\|ref\|XP_004136921.1\|	1.1e-62	67.90	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|659110143\|ref\|XP_008455071.1\|	2.4e-62	68.32	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|645261138\|ref\|XP_008236150.1\|	2.4e-54	61.49	PREDICTED: basic form of pathogenesis-related protein 1-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU32251	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU49509	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001628	Cla001628.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU32251	WMU32251	transcribed_cluster
WMU49509	WMU49509	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 47..65 score: 9.8E-20coord: 143..156 score: 9.8E-20coord: 116..132 score: 9.8E-20coord: 93..106 score: 9.8
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..160 score: 7.2
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 24..160 score: 3.8
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..148 score: 1.5
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 26..156 score: 2.0
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 26..160 score: 1.44
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 117..127 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 143..154 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..160 score: 7.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla001628	Csa7G070230	Cucumber (Chinese Long) v2	cuwmB605
Cla001628	MELO3C018545	Melon (DHL92) v3.5.1	mewmB240
Cla001628	ClCG02G007260	Watermelon (Charleston Gray)	wcgwmB198
Cla001628	CSPI07G06590	Wild cucumber (PI 183967)	cpiwmB623
Cla001628	Cucsa.218890	Cucumber (Gy14) v1	cgywmB427
Cla001628	Lsi03G006210	Bottle gourd (USVL1VR-Ls)	lsiwmB268
Cla001628	MELO3C018546.2	Melon (DHL92) v3.6.1	medwmB232
Cla001628	CsaV3_7G007560	Cucumber (Chinese Long) v3	cucwmB635

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla001628	Cucurbita maxima (Rimu)	cmawmB503
Cla001628	Cucurbita moschata (Rifu)	cmowmB496
Cla001628	Cucurbita pepo (Zucchini)	cpewmB268
Cla001628	Watermelon (97103) v2	wmwmbB317
Cla001628	Wax gourd	wgowmB279