Cla001437 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001437
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1)
Location	Chr9 : 23152834 .. 23153751 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTATTTACTGCATCATGCGGGGAATTTGGCTAGATGTGGGACGCATCATTGCCCCACAGATTCGGGGGTTTTTTTTCAAGCCAAGGGGTCAGCTGTTCTTCCCCTTTCTTGTGACAAGACTGTGCGCCAACGCAGAATTCATGGAGGATGCGCCGGTCAGAGCAGTAAATAGAGTCCTTTCAGCCCAAAGTCTGAGATGGATATTAAAGGACTCACCGGATCTGCTTGAGGCGGCCAACTCAAAGAAGAGGCCGACCAAGTCACAAGAACCATCATCCCCCAACACACAAGCCTTGACCATTTATACTCCTCCCATCGACCCAATCACTGAGGAGCCCTCTTCACCACCAACTTCCCCTTCCCCTAAAATCCAAAAAGAACCACTTCATGTACCTATCACCCAACGCAGCCTCCCATCGCGTCTTCAGCTTCCTATCACAGACTTAAATGAAGAGTCGAAGGAAGTGTCGTCGCCTTCTTTGCCCCATCTGGAGTTAACCCTCTCCCTGCCTCAATCATTTACCTTTCGAGAGGCAACTCCATCCCCACCAGCACCACCCGTTGAGCCGACCCTGACTCTGGATCCGCCCTTTCAATTCTCACCGCCTCGCCATGAACCTCAATCTTCCAATCTTCCAACTCCACCAACTACTGAACCTTCTGCCCACCCAACTTCTCAACCGCAGGCAGAAGCAACTATAAGCACGCATCTTCAAGAAGAACCATATCACTTATGGCATGCCTCTGCTCTGTTTGATTTAAATTTGGATGATTTGCTACGGTACTTGGATGATGGGATCCTTCACCCCGTCATGGGAGACCTGGATGAAATTCGGCGCAAGGAGATGGAAAGTCTCCAGCGGCAAGAAGAGTTGGCTCAACAAGTTTCACAATTGGGTCAGCAAGTGACTTAG

mRNA sequence

ATGGTTATTTACTGCATCATGCGGGGAATTTGGCTAGATGTGGGACGCATCATTGCCCCACAGATTCGGGGGTTTTTTTTCAAGCCAAGGGGTCAGCTGTTCTTCCCCTTTCTTGTGACAAGACTGTGCGCCAACGCAGAATTCATGGAGGATGCGCCGGTCAGAGCAGTAAATAGAGTCCTTTCAGCCCAAAGTCTGAGATGGATATTAAAGGACTCACCGGATCTGCTTGAGGCGGCCAACTCAAAGAAGAGGCCGACCAAGTCACAAGAACCATCATCCCCCAACACACAAGCCTTGACCATTTATACTCCTCCCATCGACCCAATCACTGAGGAGCCCTCTTCACCACCAACTTCCCCTTCCCCTAAAATCCAAAAAGAACCACTTCATGTACCTATCACCCAACGCAGCCTCCCATCGCGTCTTCAGCTTCCTATCACAGACTTAAATGAAGAGTCGAAGGAAGTGTCGTCGCCTTCTTTGCCCCATCTGGAGTTAACCCTCTCCCTGCCTCAATCATTTACCTTTCGAGAGGCAACTCCATCCCCACCAGCACCACCCGTTGAGCCGACCCTGACTCTGGATCCGCCCTTTCAATTCTCACCGCCTCGCCATGAACCTCAATCTTCCAATCTTCCAACTCCACCAACTACTGAACCTTCTGCCCACCCAACTTCTCAACCGCAGGCAGAAGCAACTATAAGCACGCATCTTCAAGAAGAACCATATCACTTATGGCATGCCTCTGCTCTGTTTGATTTAAATTTGGATGATTTGCTACGGTACTTGGATGATGGGATCCTTCACCCCGTCATGGGAGACCTGGATGAAATTCGGCGCAAGGAGATGGAAAGTCTCCAGCGGCAAGAAGAGTTGGCTCAACAAGTTTCACAATTGGGTCAGCAAGTGACTTAG

Coding sequence (CDS)

ATGGTTATTTACTGCATCATGCGGGGAATTTGGCTAGATGTGGGACGCATCATTGCCCCACAGATTCGGGGGTTTTTTTTCAAGCCAAGGGGTCAGCTGTTCTTCCCCTTTCTTGTGACAAGACTGTGCGCCAACGCAGAATTCATGGAGGATGCGCCGGTCAGAGCAGTAAATAGAGTCCTTTCAGCCCAAAGTCTGAGATGGATATTAAAGGACTCACCGGATCTGCTTGAGGCGGCCAACTCAAAGAAGAGGCCGACCAAGTCACAAGAACCATCATCCCCCAACACACAAGCCTTGACCATTTATACTCCTCCCATCGACCCAATCACTGAGGAGCCCTCTTCACCACCAACTTCCCCTTCCCCTAAAATCCAAAAAGAACCACTTCATGTACCTATCACCCAACGCAGCCTCCCATCGCGTCTTCAGCTTCCTATCACAGACTTAAATGAAGAGTCGAAGGAAGTGTCGTCGCCTTCTTTGCCCCATCTGGAGTTAACCCTCTCCCTGCCTCAATCATTTACCTTTCGAGAGGCAACTCCATCCCCACCAGCACCACCCGTTGAGCCGACCCTGACTCTGGATCCGCCCTTTCAATTCTCACCGCCTCGCCATGAACCTCAATCTTCCAATCTTCCAACTCCACCAACTACTGAACCTTCTGCCCACCCAACTTCTCAACCGCAGGCAGAAGCAACTATAAGCACGCATCTTCAAGAAGAACCATATCACTTATGGCATGCCTCTGCTCTGTTTGATTTAAATTTGGATGATTTGCTACGGTACTTGGATGATGGGATCCTTCACCCCGTCATGGGAGACCTGGATGAAATTCGGCGCAAGGAGATGGAAAGTCTCCAGCGGCAAGAAGAGTTGGCTCAACAAGTTTCACAATTGGGTCAGCAAGTGACTTAG

Protein sequence

MVIYCIMRGIWLDVGRIIAPQIRGFFFKPRGQLFFPFLVTRLCANAEFMEDAPVRAVNRVLSAQSLRWILKDSPDLLEAANSKKRPTKSQEPSSPNTQALTIYTPPIDPITEEPSSPPTSPSPKIQKEPLHVPITQRSLPSRLQLPITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPAPPVEPTLTLDPPFQFSPPRHEPQSSNLPTPPTTEPSAHPTSQPQAEATISTHLQEEPYHLWHASALFDLNLDDLLRYLDDGILHPVMGDLDEIRRKEMESLQRQEELAQQVSQLGQQVT

Homology

[Close]

BLAST of Cla001437 vs. Swiss-Prot
Match: GP1BA_CANLF (Platelet glycoprotein Ib alpha chain OS=Canis lupus familiaris GN=GP1BA PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 7.9e-06
Identity = 48/154 (31.17%), Postives = 59/154 (38.31%), Query Frame = 1


Query: 86  PTKSQEPSSPNTQALTIYTPPIDPITEEPSSPPTSPSPKIQKEPLHVPITQRSLPSRLQL 145
           PT +     P T   T+  P   PIT EP+ PPT+       EP   PIT          
Sbjct: 380 PTTTPTTPEPTTPPTTL-EPTTTPITPEPTMPPTT------LEPTTTPITP--------- 439

Query: 146 PITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPAPPVEPTLTLDPPFQFSPPR 205
                 E +   ++P+ P    T + PQ  T    TP+ P P   PT           P 
Sbjct: 440 ------EPTTPSTTPTTPQPATTPTTPQPAT----TPTTPQPATTPTT--------PQPT 499

Query: 206 HEPQSSNLPTPPTT-EPSAHPTS-QPQAEATIST 238
             P    LPTPPTT EP+  PT+ +P    T  T
Sbjct: 500 TTPTIPELPTPPTTPEPTMPPTTLEPTTTPTSPT 499

[Close]

BLAST of Cla001437 vs. TrEMBL
Match: B9RZI2_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0939530 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.9e-09
Identity = 57/163 (34.97%), Postives = 68/163 (41.72%), Query Frame = 1


Query: 73  SPDLLEAANSKKRPTKSQEPSSPNTQALTIYTPP-IDPITEEPSSPPTSPSPKIQKEPLH 132
           SP      +    PT S  PSS   ++    T P + P   EP+SP TSPSP  +     
Sbjct: 517 SPSPSSEPSEPTSPTTSPSPSSEPLESTPPTTSPSLSPEPSEPTSPTTSPSPSPEPSEPT 576

Query: 133 VPITQRSLPSRLQLPITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPA---PP 192
            P T  S       P    + ES+  S  S P  E  LS P S T  E +PSPP    PP
Sbjct: 577 SPTTSPSPEYNSSEPSPTPSPESEPQSPTSTPSPESPLSSPTSPTL-EQSPSPPGQSPPP 636

Query: 193 VEPTLTLDPPFQFSPP--RHEPQSSNLPTPPTTEPSAHPTSQP 230
             P  +  PP Q  PP  +  P   N P PP   P   P S P
Sbjct: 637 TTPEQSPSPPGQSPPPPTQSPPPPVNSPPPPVYSPP--PPSPP 676

[Close]

BLAST of Cla001437 vs. TrEMBL
Match: B9RZI2_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0939530 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.7e-08
Identity = 59/178 (33.15%), Postives = 73/178 (41.01%), Query Frame = 1


Query: 73  SPDLLEAANSKKRPTKSQEPSSPNTQALTIYTPPIDPITEEPSSPPTSPSPKI-QKEPLH 132
           S + LE+      P+ S EPS P +   +   P   P   EP+SP TSPSP+    EP  
Sbjct: 537 SSEPLESTPPTTSPSLSPEPSEPTSPTTS---PSPSPEPSEPTSPTTSPSPEYNSSEPSP 596

Query: 133 VPITQRSLPSRLQLPITDLNEESKEVSSPSLPHLELTLSLPQSF---TFREATPSPPA-P 192
            P    S  S  Q P +  + ES  +SSP+ P LE + S P      T  E +PSPP   
Sbjct: 597 TP----SPESEPQSPTSTPSPES-PLSSPTSPTLEQSPSPPGQSPPPTTPEQSPSPPGQS 656

Query: 193 PVEPTLTLDPPFQFSPPRHEPQSSNLPTPPTTEPSAHPTSQPQAEATISTHLQEEPYH 246
           P  PT +  PP    PP         P PP   P     S P        H    P H
Sbjct: 657 PPPPTQSPPPPVNSPPPPVYSPPPPSPPPPVHSPPPPVYSPPPPSPPPPVHSPPPPVH 706

HSP 2 Score: 56.2 bits (134), Expect = 7.9e-05
Identity = 49/159 (30.82%), Postives = 64/159 (40.25%), Query Frame = 1


Query: 73  SPDLLEAANSKKRPTKSQEPSSPNTQALTIYTPPIDPITEEPSSPPTSPSPKIQKEPLHV 132
           SP+  +  +    P+ S EPS P   A T  +P  +P   EP+SP TSPSP  +      
Sbjct: 489 SPEPSKPTSPTTSPSPSPEPSEPTPPA-TSPSPSSEP--SEPTSPTTSPSPSSEPLESTP 548

Query: 133 PITQRSLPSRLQLPITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSP-PAPPVEP 192
           P T  SL              S E S P+ P                 +PSP P+ P  P
Sbjct: 549 PTTSPSL--------------SPEPSEPTSP-------------TTSPSPSPEPSEPTSP 608

Query: 193 TLTLDPPFQFSPPRHEPQSSNLPTPPTTEPSAH-PTSQP 230
           T +  P +  S P   P   + P  PT+ PS   P S P
Sbjct: 609 TTSPSPEYNSSEPSPTPSPESEPQSPTSTPSPESPLSSP 617

HSP 3 Score: 52.0 bits (123), Expect = 1.5e-03
Identity = 46/157 (29.30%), Postives = 69/157 (43.95%), Query Frame = 1


Query: 87  TKSQEPSSPNTQALTIYTPPIDPITEEPSSPPTSPSPKIQKEPLHVPITQRSLPSRLQLP 146
           T S EP +P+       +P   P   +P+SP TSPSP  +      P T  S       P
Sbjct: 469 TPSSEPYNPSPGGHR-ESPTPSPEPSKPTSPTTSPSPSPEPSEPTPPATSPS-------P 528

Query: 147 ITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPAPPVEPTLTLDPPFQFSPPRH 206
            ++ +E +   +SPS P  E   S P   T   +    P+ P  PT +  P  + S P  
Sbjct: 529 SSEPSEPTSPTTSPS-PSSEPLESTPP--TTSPSLSPEPSEPTSPTTSPSPSPEPSEPT- 588

Query: 207 EPQSSNLPTPPTTEPSAHPTSQPQAEATISTHLQEEP 244
            P +S  P   ++EPS  P+ + + ++  ST   E P
Sbjct: 589 SPTTSPSPEYNSSEPSPTPSPESEPQSPTSTPSPESP 613

HSP 4 Score: 48.5 bits (114), Expect = 1.7e-02
Identity = 51/167 (30.54%), Postives = 67/167 (40.12%), Query Frame = 1


Query: 86  PTKSQEPS-SPNTQALTIYTP-PIDPITEEPSSPPTSPSPKIQKEPL-HVPITQRSLPS- 145
           PT S  PS S      T Y P P  P    PS+P  SPSP  Q+ P    P ++   PS 
Sbjct: 422 PTPSTPPSTSYGPTPSTPYVPTPSTPYVPTPSTP--SPSPPQQEVPTPQTPSSEPYNPSP 481

Query: 146 --RLQLPITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPAPPVEPTLTLDP-- 205
               + P T   E SK  S  + P      S P       +  S P+ P  PT +  P  
Sbjct: 482 GGHRESP-TPSPEPSKPTSPTTSPSPSPEPSEPTPPATSPSPSSEPSEPTSPTTSPSPSS 541

Query: 206 -PFQFSPPRHEPQSSNLPTPPTTEPSAHPTSQPQAEATISTHLQEEP 244
            P + +PP   P  S  P+ PT+ P+  P+  P+     S      P
Sbjct: 542 EPLESTPPTTSPSLSPEPSEPTS-PTTSPSPSPEPSEPTSPTTSPSP 584

HSP 5 Score: 69.3 bits (168), Expect = 9.1e-09
Identity = 55/167 (32.93%), Postives = 75/167 (44.91%), Query Frame = 1


Query: 92  PSSPNTQALTIYTPP----IDPITEEPSSPP------TSPSPKIQKEPLHVPI------- 151
           P++P       +TPP    + P+T  PSS P      TSP+P    EP H P        
Sbjct: 471 PTAPPKLVPEDFTPPSLPTVPPLTPAPSSEPRATSGTTSPAPST--EPSHEPTPTSGPPG 530

Query: 152 ---TQRSLPSRLQL---PITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPP-AP 211
              T    PS   +   P T  +E S   S+P+ P    T   P + T RE   +PP + 
Sbjct: 531 GATTSAPAPSTTSVAPAPTTPKDETSAPASTPATP----THETPATSTPRETVSTPPPSA 590

Query: 212 PVEPTLTLDPPFQFSPPRHEPQSSNLPTPPTTEPSAHPTSQPQAEAT 235
             EP+   +P  Q S P +E  SS  P P TTEP+  PT++  A+ T
Sbjct: 591 TAEPSAAPEPTKQRSTPTYEAPSSEAPAPRTTEPAPQPTAEAPAKQT 631

[Close]

BLAST of Cla001437 vs. TrEMBL
Match: A0A0R3FHS7_9MYCO (Uncharacterized protein OS=Mycobacterium sp. H092 GN=AOT91_08475 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.0e-08
Identity = 54/167 (32.34%), Postives = 75/167 (44.91%), Query Frame = 1


Query: 92  PSSPNTQALTIYTPP----IDPITEEPSSPP------TSPSPKIQKEPLHVPI------- 151
           P++P       +TPP    + P+T  PSS P      TSP+P    EP H P        
Sbjct: 471 PTAPPKLVPEDFTPPSLPTVPPLTPAPSSEPRATSGTTSPAPST--EPSHEPTPTSGPPG 530

Query: 152 ---TQRSLPSRLQL---PITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSP-PAP 211
              T    PS   +   P T  +E S   S+P+ P    T   P + T R+   +P P+ 
Sbjct: 531 GATTSAPAPSTTSVAPAPTTPKDETSAPASTPATP----THETPATSTPRQTVSTPQPSA 590

Query: 212 PVEPTLTLDPPFQFSPPRHEPQSSNLPTPPTTEPSAHPTSQPQAEAT 235
             EP+   +P  Q S P +E  SS  P P TTEP+  PT++  A+ T
Sbjct: 591 TAEPSAAPEPTKQRSTPTYEAPSSEAPAPRTTEPAPQPTAEAPAKQT 631

[Close]

BLAST of Cla001437 vs. TrEMBL
Match: A0A145TKP6_9MYCO (Uncharacterized protein OS=Mycobacterium sp. QIA-37 GN=Chelonae_p2719 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07
Identity = 55/178 (30.90%), Postives = 78/178 (43.82%), Query Frame = 1


Query: 92  PSSPNTQALTIYTPP----IDPITEEPSSPP------TSPSPKIQKEPLHVPI------- 151
           P++P       +TPP    + P+T  PSS P      TSP+P    EP H P        
Sbjct: 471 PTAPPKLVPEDFTPPSLPTVPPLTPAPSSEPRATSGTTSPAPST--EPSHEPTPTSGPPG 530

Query: 152 ---TQRSLPSRLQL---PITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSP-PAP 211
              T    PS   +   P T  +E S   S+ + P    T   P + T R+   +P P+ 
Sbjct: 531 GATTSAPAPSTTSVAPAPTTPKDETSAPASTQATP----THETPATSTPRQTVSTPQPSA 590

Query: 212 PVEPTLTLDPPFQFSPPRHEPQSSNLPTPPTTEPSAHPTSQPQAEATISTHLQEEPYH 246
             EP+   +P  Q S P +E  SS  P P TTEP+  PT++  A+ T     + +P H
Sbjct: 591 TAEPSAAPEPTKQRSTPTYEAPSSEAPAPRTTEPATQPTAEAPAKQT-PVERETQPSH 641

[Close]

BLAST of Cla001437 vs. TrEMBL
Match: W5QDK3_SHEEP (Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07
Identity = 51/151 (33.77%), Postives = 70/151 (46.36%), Query Frame = 1


Query: 81  NSKKRPTKSQEPSSPNTQALTIY----TPPIDPITEEPSSPPTSPSPKIQKEPLHVPITQ 140
           +S   P+    PSSP+  +   +    +PP    +  P+SPPTSPSP     P   P   
Sbjct: 117 SSPSHPSSPSPPSSPSPPSSPSHPSSPSPPSPASSPSPASPPTSPSPPSSPSPPSSP--- 176

Query: 141 RSLPSRLQLPITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPAPPVEPTLTLD 200
            S PS   LP           SSPS P    +   P S   R ++PSPP+P   PT +  
Sbjct: 177 -SPPSPASLP-----------SSPSPP----SSPSPPSSPSRPSSPSPPSPASPPT-SPS 236

Query: 201 PPFQFSPPRHEPQSSNLPTPPTTEPSAHPTS 228
           PP   SPP   P   + P+PP++   +HP+S
Sbjct: 237 PPTSPSPP-SSPSPPSSPSPPSS--PSHPSS 244

[Close]

BLAST of Cla001437 vs. NCBI nr
Match: gi|255556233|ref|XP_002519151.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Ricinus communis])

HSP 1 Score: 69.7 bits (169), Expect = 1.0e-08
Identity = 57/163 (34.97%), Postives = 68/163 (41.72%), Query Frame = 1


Query: 73  SPDLLEAANSKKRPTKSQEPSSPNTQALTIYTPP-IDPITEEPSSPPTSPSPKIQKEPLH 132
           SP      +    PT S  PSS   ++    T P + P   EP+SP TSPSP  +     
Sbjct: 517 SPSPSSEPSEPTSPTTSPSPSSEPLESTPPTTSPSLSPEPSEPTSPTTSPSPSPEPSEPT 576

Query: 133 VPITQRSLPSRLQLPITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPA---PP 192
            P T  S       P    + ES+  S  S P  E  LS P S T  E +PSPP    PP
Sbjct: 577 SPTTSPSPEYNSSEPSPTPSPESEPQSPTSTPSPESPLSSPTSPTL-EQSPSPPGQSPPP 636

Query: 193 VEPTLTLDPPFQFSPP--RHEPQSSNLPTPPTTEPSAHPTSQP 230
             P  +  PP Q  PP  +  P   N P PP   P   P S P
Sbjct: 637 TTPEQSPSPPGQSPPPPTQSPPPPVNSPPPPVYSPP--PPSPP 676

[Close]

BLAST of Cla001437 vs. NCBI nr
Match: gi|255556233|ref|XP_002519151.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Ricinus communis])

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 59/178 (33.15%), Postives = 73/178 (41.01%), Query Frame = 1


Query: 73  SPDLLEAANSKKRPTKSQEPSSPNTQALTIYTPPIDPITEEPSSPPTSPSPKI-QKEPLH 132
           S + LE+      P+ S EPS P +   +   P   P   EP+SP TSPSP+    EP  
Sbjct: 537 SSEPLESTPPTTSPSLSPEPSEPTSPTTS---PSPSPEPSEPTSPTTSPSPEYNSSEPSP 596

Query: 133 VPITQRSLPSRLQLPITDLNEESKEVSSPSLPHLELTLSLPQSF---TFREATPSPPA-P 192
            P    S  S  Q P +  + ES  +SSP+ P LE + S P      T  E +PSPP   
Sbjct: 597 TP----SPESEPQSPTSTPSPES-PLSSPTSPTLEQSPSPPGQSPPPTTPEQSPSPPGQS 656

Query: 193 PVEPTLTLDPPFQFSPPRHEPQSSNLPTPPTTEPSAHPTSQPQAEATISTHLQEEPYH 246
           P  PT +  PP    PP         P PP   P     S P        H    P H
Sbjct: 657 PPPPTQSPPPPVNSPPPPVYSPPPPSPPPPVHSPPPPVYSPPPPSPPPPVHSPPPPVH 706

HSP 2 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 49/159 (30.82%), Postives = 64/159 (40.25%), Query Frame = 1


Query: 73  SPDLLEAANSKKRPTKSQEPSSPNTQALTIYTPPIDPITEEPSSPPTSPSPKIQKEPLHV 132
           SP+  +  +    P+ S EPS P   A T  +P  +P   EP+SP TSPSP  +      
Sbjct: 489 SPEPSKPTSPTTSPSPSPEPSEPTPPA-TSPSPSSEP--SEPTSPTTSPSPSSEPLESTP 548

Query: 133 PITQRSLPSRLQLPITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSP-PAPPVEP 192
           P T  SL              S E S P+ P                 +PSP P+ P  P
Sbjct: 549 PTTSPSL--------------SPEPSEPTSP-------------TTSPSPSPEPSEPTSP 608

Query: 193 TLTLDPPFQFSPPRHEPQSSNLPTPPTTEPSAH-PTSQP 230
           T +  P +  S P   P   + P  PT+ PS   P S P
Sbjct: 609 TTSPSPEYNSSEPSPTPSPESEPQSPTSTPSPESPLSSP 617

HSP 3 Score: 52.0 bits (123), Expect = 2.2e-03
Identity = 46/157 (29.30%), Postives = 69/157 (43.95%), Query Frame = 1


Query: 87  TKSQEPSSPNTQALTIYTPPIDPITEEPSSPPTSPSPKIQKEPLHVPITQRSLPSRLQLP 146
           T S EP +P+       +P   P   +P+SP TSPSP  +      P T  S       P
Sbjct: 469 TPSSEPYNPSPGGHR-ESPTPSPEPSKPTSPTTSPSPSPEPSEPTPPATSPS-------P 528

Query: 147 ITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPAPPVEPTLTLDPPFQFSPPRH 206
            ++ +E +   +SPS P  E   S P   T   +    P+ P  PT +  P  + S P  
Sbjct: 529 SSEPSEPTSPTTSPS-PSSEPLESTPP--TTSPSLSPEPSEPTSPTTSPSPSPEPSEPT- 588

Query: 207 EPQSSNLPTPPTTEPSAHPTSQPQAEATISTHLQEEP 244
            P +S  P   ++EPS  P+ + + ++  ST   E P
Sbjct: 589 SPTTSPSPEYNSSEPSPTPSPESEPQSPTSTPSPESP 613

HSP 4 Score: 48.5 bits (114), Expect = 2.4e-02
Identity = 51/167 (30.54%), Postives = 67/167 (40.12%), Query Frame = 1


Query: 86  PTKSQEPS-SPNTQALTIYTP-PIDPITEEPSSPPTSPSPKIQKEPL-HVPITQRSLPS- 145
           PT S  PS S      T Y P P  P    PS+P  SPSP  Q+ P    P ++   PS 
Sbjct: 422 PTPSTPPSTSYGPTPSTPYVPTPSTPYVPTPSTP--SPSPPQQEVPTPQTPSSEPYNPSP 481

Query: 146 --RLQLPITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPAPPVEPTLTLDP-- 205
               + P T   E SK  S  + P      S P       +  S P+ P  PT +  P  
Sbjct: 482 GGHRESP-TPSPEPSKPTSPTTSPSPSPEPSEPTPPATSPSPSSEPSEPTSPTTSPSPSS 541

Query: 206 -PFQFSPPRHEPQSSNLPTPPTTEPSAHPTSQPQAEATISTHLQEEP 244
            P + +PP   P  S  P+ PT+ P+  P+  P+     S      P
Sbjct: 542 EPLESTPPTTSPSLSPEPSEPTS-PTTSPSPSPEPSEPTSPTTSPSP 584

HSP 5 Score: 69.3 bits (168), Expect = 1.3e-08
Identity = 55/167 (32.93%), Postives = 75/167 (44.91%), Query Frame = 1


Query: 92  PSSPNTQALTIYTPP----IDPITEEPSSPP------TSPSPKIQKEPLHVPI------- 151
           P++P       +TPP    + P+T  PSS P      TSP+P    EP H P        
Sbjct: 471 PTAPPKLVPEDFTPPSLPTVPPLTPAPSSEPRATSGTTSPAPST--EPSHEPTPTSGPPG 530

Query: 152 ---TQRSLPSRLQL---PITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPP-AP 211
              T    PS   +   P T  +E S   S+P+ P    T   P + T RE   +PP + 
Sbjct: 531 GATTSAPAPSTTSVAPAPTTPKDETSAPASTPATP----THETPATSTPRETVSTPPPSA 590

Query: 212 PVEPTLTLDPPFQFSPPRHEPQSSNLPTPPTTEPSAHPTSQPQAEAT 235
             EP+   +P  Q S P +E  SS  P P TTEP+  PT++  A+ T
Sbjct: 591 TAEPSAAPEPTKQRSTPTYEAPSSEAPAPRTTEPAPQPTAEAPAKQT 631

[Close]

BLAST of Cla001437 vs. NCBI nr
Match: gi|1015672738|gb|AMW20470.1| (hypothetical protein Chelonae_p2719 [Mycobacterium sp. QIA-37])

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07
Identity = 55/178 (30.90%), Postives = 78/178 (43.82%), Query Frame = 1


Query: 92  PSSPNTQALTIYTPP----IDPITEEPSSPP------TSPSPKIQKEPLHVPI------- 151
           P++P       +TPP    + P+T  PSS P      TSP+P    EP H P        
Sbjct: 471 PTAPPKLVPEDFTPPSLPTVPPLTPAPSSEPRATSGTTSPAPST--EPSHEPTPTSGPPG 530

Query: 152 ---TQRSLPSRLQL---PITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSP-PAP 211
              T    PS   +   P T  +E S   S+ + P    T   P + T R+   +P P+ 
Sbjct: 531 GATTSAPAPSTTSVAPAPTTPKDETSAPASTQATP----THETPATSTPRQTVSTPQPSA 590

Query: 212 PVEPTLTLDPPFQFSPPRHEPQSSNLPTPPTTEPSAHPTSQPQAEATISTHLQEEPYH 246
             EP+   +P  Q S P +E  SS  P P TTEP+  PT++  A+ T     + +P H
Sbjct: 591 TAEPSAAPEPTKQRSTPTYEAPSSEAPAPRTTEPATQPTAEAPAKQT-PVERETQPSH 641

[Close]

BLAST of Cla001437 vs. NCBI nr
Match: gi|914565936|gb|KOB70769.1| (Intestinal mucin, partial [Operophtera brumata])

HSP 1 Score: 64.3 bits (155), Expect = 4.2e-07
Identity = 47/149 (31.54%), Postives = 61/149 (40.94%), Query Frame = 1


Query: 89  SQEPSSPNTQALTIYTPPIDPITEEPSSPPTSPSPKIQKEPLHVPITQRSLPSRLQLPIT 148
           +Q P+ P TQA      P DP T+ P+ PPT    +   +    P TQ       Q P  
Sbjct: 93  TQAPTEPPTQA------PTDPPTQAPTEPPTQAPTEPPTQAPTEPPTQAPTDPPTQAPTE 152

Query: 149 DLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPAPPVEPTLTLDPPFQFSPPRHEP 208
                S    +P+ P  E     P     +  T  P  PP EP    +PP +  PP   P
Sbjct: 153 P--PTSAPTQAPTEPPTEPPTEPPTELPTQPPTEPPTEPPTEPPT--EPPTE--PPTEPP 212

Query: 209 QSSNLPTPPTTEPSAHPTSQPQAEATIST 238
             + LPT PTTEP   P ++P  E    T
Sbjct: 213 --TELPTEPTTEPPTEPPTEPPTEPPTET 227

[Close]

BLAST of Cla001437 vs. NCBI nr
Match: gi|914565936|gb|KOB70769.1| (Intestinal mucin, partial [Operophtera brumata])

HSP 1 Score: 62.0 bits (149), Expect = 2.1e-06
Identity = 50/163 (30.67%), Postives = 62/163 (38.04%), Query Frame = 1


Query: 72  DSPDLLEAANSKKRPTK--SQEPSSPNTQALTIYTPPIDPITEEPSSPPTSPSPKIQKEP 131
           D P         + PT+  +Q P+ P TQA T   PP    TE P+S PT    +   EP
Sbjct: 106 DPPTQAPTEPPTQAPTEPPTQAPTEPPTQAPT--DPPTQAPTEPPTSAPTQAPTEPPTEP 165

Query: 132 LHVPITQRSLPSRLQLPITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPAPPV 191
              P T+       + P     E   E   P+ P  E    LP   T    T  P  PP 
Sbjct: 166 PTEPPTELPTQPPTEPPTEPPTEPPTE--PPTEPPTEPPTELPTEPTTEPPTEPPTEPPT 225

Query: 192 EPTLTLDPPFQFSPPRHEPQSSNLPTPPTTEPSAHPTSQPQAE 233
           EP           PP   P     PT P TEP+  P ++P  E
Sbjct: 226 EPPTETPTEPPTEPPTEPPTEP--PTLPPTEPATEPPTEPPTE 262

HSP 2 Score: 63.9 bits (154), Expect = 5.5e-07
Identity = 45/144 (31.25%), Postives = 63/144 (43.75%), Query Frame = 1


Query: 87  TKSQEPSSPNTQALTIYTPPIDPITEEPSSPPTSPSPKIQKEPLHVPITQRSLPSRLQLP 146
           T + EP++P T   T  TP  +P T  P++P T P+          P T+ + P+    P
Sbjct: 223 TPTTEPTTPTTAPTTPTTPTTEPTTPTPTTPTTEPT---------TPTTEPTTPT--TEP 282

Query: 147 ITDLNEESKEVSSPSLPHLELTLSLPQSFTFREATPSPPAPPVEPTL-TLDPPFQFSPPR 206
            T   E +   + P+ P  E T    +  T    T  P  P  EPT  T +P    + P 
Sbjct: 283 TTPTTEPTTPTTEPTTPTTEPTTPTTEPTT---PTTEPTTPTTEPTTPTTEPTTPTTEPT 342

Query: 207 HEPQSSNLPTPPTTEPSAHPTSQP 230
                   PT PTTEP+  PT+QP
Sbjct: 343 TPTTEPTTPTTPTTEPTT-PTTQP 351

The following BLAST results are available for this feature:

BLAST of Cla001437 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GP1BA_CANLF	7.9e-06	31.17	Platelet glycoprotein Ib alpha chain OS=Canis lupus familiaris GN=GP1BA PE=2 SV=...	[more]

BLAST of Cla001437 vs. TrEMBL


Match Name	E-value	Identity	Description
B9RZI2_RICCO	6.9e-09	34.97	Protein binding protein, putative OS=Ricinus communis GN=RCOM_0939530 PE=4 SV=1	[more]
B9RZI2_RICCO	7.7e-08	33.15	Protein binding protein, putative OS=Ricinus communis GN=RCOM_0939530 PE=4 SV=1	[more]
A0A0R3FHS7_9MYCO	2.0e-08	32.34	Uncharacterized protein OS=Mycobacterium sp. H092 GN=AOT91_08475 PE=4 SV=1	[more]
A0A145TKP6_9MYCO	1.0e-07	30.90	Uncharacterized protein OS=Mycobacterium sp. QIA-37 GN=Chelonae_p2719 PE=4 SV=1	[more]
W5QDK3_SHEEP	5.0e-07	33.77	Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1	[more]

BLAST of Cla001437 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|255556233\|ref\|XP_002519151.1\|	1.0e-08	34.97	PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Ricinus ...	[more]
gi\|255556233\|ref\|XP_002519151.1\|	1.1e-07	33.15	PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Ricinus ...	[more]
gi\|1015672738\|gb\|AMW20470.1\|	1.4e-07	30.90	hypothetical protein Chelonae_p2719 [Mycobacterium sp. QIA-37]	[more]
gi\|914565936\|gb\|KOB70769.1\|	4.2e-07	31.54	Intestinal mucin, partial [Operophtera brumata]	[more]
gi\|914565936\|gb\|KOB70769.1\|	2.1e-06	30.67	Intestinal mucin, partial [Operophtera brumata]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla001437	Cla001437.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla001437	Watermelon (97103) v2	wmwmbB044
Cla001437	Watermelon (Charleston Gray)	wcgwmB010