Cla000624 (gene) Watermelon (97103) v1

Overview
NameCla000624
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionFtsH extracellular protease family (AHRD V1 ***- F4J3N2_ARATH)
LocationChr3 : 14230959 .. 14233954 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTCTTTAAGGTTGTTGAAATGGGAAACTGCGCTTTTTCCTGAAAAGAAATTGCAGGTTTTTTCTTCTCAACCCTCTTGGGAGGTTGTTTTCCAGTATCTATCAGATAAAAGTTGTTTCATGTAATAAAATAGAGATTAATTTAAAAAACATGCTTGTGAATGTGTATAAAGGCCCTAATAGTCAAAATATATACAACAATAAGATCCTTTGAAAATTTTCTCTATTTTCCTTCTTTATTTCTTGATATCCATGAGTTTACACGCTTTGACTAATCTCATGGGATTGTTTTCCTTCTTAATTACACTTTAATTTATTTATTTTTGGTCACTTATTGGGATATTTTGCTTTTAGGTTGCCGAGAAAACATCCCTTTTACGACCGGTGGAACTAAAACTTGTCCCACTTGCCTTGGAAGGAAGTGCTTTTCGGAGCAAATTCCTTGACACTGATGAACTGATGGGCTACTCTAGCTTGTTTGCTGTAAGAATTACTGCTTTCTTCATTAAAATAATATTTGTTATTATTATTGTTATTGCCAGAGACAAATTTATTAATTTTTCTTGCTCACTAGTGTGTTTTATGTTTTAAAATCATTATTGTCTTCGGGTATCTCATAAAATGATGTAATAGCAAGCTAATCTCGCTAAATCCTTGATTAAGTACATTTTAATTACCAAATTAGGTACTTAGGCTACATCAATAATGAAAGAGAGAAATCTCCAAGATCCCAAACTAAAGTCTTTTATTATGAATGAAAAGATGAGATACAATGGGAGGAACCCTCTATTTATAGAGAATTATAAGTGTCTTAAAGGATAACTAAAAAAGGTTAAAAACCTAATTTGGTAATTAAAATGTACTTATCAAGGATTTACCAAGATTAGCTTGAAATGGCTAAATTATACCAAACCTATTACATCATAAAAGAAAAAAAAAACCATAGTTGGGTTTGTCTCATTGTGTGTCACGTCATTGTGGACAAAACTTTCTTTATTTTTTGATTTTAGGAAAGAAAAGGTAATGGTTCTGTTGGAAACTCCATGGGGAAATGTTTATTTGGAGGGCAGCTTCTGCTTTTTCCCCATTTTGATAAGTCTTCCTCGATTTCCCTGGGTTTTTGTCCCCACCCCCGCTTACTAATCGGGAGGAGTTGAGGCTGTCCGTTGCCTTTCTATTACTTCTGACTAGGTGACTCGTCATGGGAGAAAGGATTCTAGACTTTGGATACCAAGAGGAGTTGGGGTGTTCGGCTTGAAATGAATAATAGCTTTTTTAGGGGGTTGAGAGAACCATGTTGAGCTTTGGGAGGCGATTAGATTTAATTTATGAGTGTCTATTAATCAAGTTTTCTTTTATTATTTTTATTTTTTGTCCTAATTTCATCTTCCACTGGAAAAGAAATATGTAGAAAGATGTGTATATCCTATGAGTTCCAACACCACGTTGATGTTAATAAAAAAATTATGCCTTGTTTGTGTTGTTTACTCTTCTCCCATTATGGTGTTCTTTTTGGTTTTGTTGTTCCATTTGACTCTAGGTGATGCTTGCTTTTGTCCTAGTATTTGCTTTGTGGTTGGTTGATTTGGTTAGTCGTTTTGTTTGTAGCTTATTTTGAGGTTCTTTCTTTTTCTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTGTAATTGGTCTTTTTGTAGTTTTTTTTTCCTTTATTTTTCTAGTTTTCGTTGGTTCTTTTTGGCCTTTTTCTAGTTTTCCTTTTCGGGAGTTCGTATCCTTGAATTTTTTCCTATTTTTCATATATCAATTAAAAGTTTATTTATTGTTATTAAAAAAAAAAAAAAAAAAAGAGAGAGAGAAAAGAAAGAAAGAAGAAAAGAGAGAAAAAGAAAAACCAGTATGCCTTGTAATTGAGTTGTAAATGTTACATGCTGCCGCTTTTTGAACCATTATTGTGAAGGGGAAGAAAAGAAGAATCAGAAGGTGTATGCAATTTTTTCATTCTTTTAGTTGGTATATATGACTTCCCAACTCTATGCTTAACTTTATGTAGATAATCACTTCATGCAATTTTTCTTTCTTGTTTGTTTGAGGTATGGTATGATTTCTTTTTCTAGATACTTTTTCCTGATTGATCTACGGAAAATTTTTGTTATACAGACTTTCAGTGGTATTGTTCCCAAGTGGGTGCAGAAAACCAGAACAGTCAAAAAACTAAACAAAATGTTGGTGAATCATCTGGGATTAACACTGTCTAAAGAAGATCTTCAAAATGTGGTTGATCTGATGGAACCATACGGTCAAATAAGCAATGGAATTGAACTCCTTAATCCTCCTCTTGATGTAAGAAAGTACTTCACATTGGGTTTTAAGTTTTTAGCTGCGTTAGTTCATTATCGTCAACTTAAAGTTAAGATATAGTATTTTTTATACATCCAGTTGCAATTCATTACTTGACTTCTACAAATTTTCAAGTACTTAAGAATCACTTTTTGATGCATAAAAGGATGAAGAAACATTAATGGTATACAGTTAAACTATGACAAATTGAGAGTGAATAATTAAGGGTATAGAATTGAGGCCAAGAATAATACTGTCATTTTTTATTTTTCTCATTACAATCTAAGTTAAAAAGAGGAATGCTTTCTTTTCCATACATATTTTAATTCAGATGATAGTTATGGTTGAAAAACTTATTTATTTATTTATTTATAAACGAGAAATGAGATATTATTGCTAAAAAACATTGGATTAAATTATAAGTCTAGTCCCGGGACTTTAGGATTATGTCTAATTGGTCATTGAACTCTATAATGTCTATTTTGTTCCTAAATATTAAATTTTATGTTTAATAGGTCCCTAAAGTTAGAAAAATGTATACTAGTTCCATGAACTTTCAACATTGCATTTAATAGGTCTATAAACTTTTAAGAATATGTCTAATAGGTCTGTGAAGATTCAATTTTATGTTTAATAGGTCCTTCAAAAGACTAG

mRNA sequence

ATGTACTCTTTAAGGTTGTTGAAATGGGAAACTGCGCTTTTTCCTGAAAAGAAATTGCAGGTTGCCGAGAAAACATCCCTTTTACGACCGGTGGAACTAAAACTTGTCCCACTTGCCTTGGAAGGAAGTGCTTTTCGGAGCAAATTCCTTGACACTGATGAACTGATGGGCTACTCTAGCTTGTTTGCTACTTTCAGTGGTATTGTTCCCAAGTGGGTGCAGAAAACCAGAACAGTCAAAAAACTAAACAAAATGTTGGTGAATCATCTGGGATTAACACTGTCTAAAGAAGATCTTCAAAATGTGGTTGATCTGATGGAACCATACGGTCAAATAAGCAATGGAATTGAACTCCTTAATCCTCCTCTTGATGTCTGTGAAGATTCAATTTTATGTTTAATAGGTCCTTCAAAAGACTAG

Coding sequence (CDS)

ATGTACTCTTTAAGGTTGTTGAAATGGGAAACTGCGCTTTTTCCTGAAAAGAAATTGCAGGTTGCCGAGAAAACATCCCTTTTACGACCGGTGGAACTAAAACTTGTCCCACTTGCCTTGGAAGGAAGTGCTTTTCGGAGCAAATTCCTTGACACTGATGAACTGATGGGCTACTCTAGCTTGTTTGCTACTTTCAGTGGTATTGTTCCCAAGTGGGTGCAGAAAACCAGAACAGTCAAAAAACTAAACAAAATGTTGGTGAATCATCTGGGATTAACACTGTCTAAAGAAGATCTTCAAAATGTGGTTGATCTGATGGAACCATACGGTCAAATAAGCAATGGAATTGAACTCCTTAATCCTCCTCTTGATGTCTGTGAAGATTCAATTTTATGTTTAATAGGTCCTTCAAAAGACTAG

Protein sequence

MYSLRLLKWETALFPEKKLQVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTRTVKKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLDVCEDSILCLIGPSKD
Homology
[Close]
BLAST of Cla000624 vs. Swiss-Prot
Match: FTSI5_ARATH (Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana GN=FTSHI5 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 8.5e-40
Identity = 79/105 (75.24%), Postives = 91/105 (86.67%), Query Frame = 1 

Query: 20   QVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTRTV 79
            +V+EKT+LLRP+ELKLVP+ALE SAFRSKFLDTDEL+ Y S FATFS IVP W++KT+  
Sbjct: 984  KVSEKTTLLRPIELKLVPMALESSAFRSKFLDTDELLSYVSWFATFSHIVPPWLRKTKVA 1043

Query: 80   KKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLD 125
            K + KMLVNHLGL L+K+DL+NVVDLMEPYGQISNGIELLNP +D
Sbjct: 1044 KTMGKMLVNHLGLNLTKDDLENVVDLMEPYGQISNGIELLNPTVD 1088

[Close]
BLAST of Cla000624 vs. TrEMBL
Match: A0A0A0M3D4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G673530 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 7.2e-46
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 1 

Query: 18  KLQVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTR 77
           +L+VAEKT+LLRPVELK VPLALE SAFRSKFLDTDEL+ Y S FATFSG+VP+WVQKTR
Sbjct: 108 QLKVAEKTALLRPVELKRVPLALEASAFRSKFLDTDELISYCSWFATFSGVVPEWVQKTR 167

Query: 78  TVKKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLDV 126
            VKKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLDV
Sbjct: 168 IVKKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLDV 215

[Close]
BLAST of Cla000624 vs. TrEMBL
Match: D7TUI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g02190 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.8e-42
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 20   QVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTRTV 79
            +VAEKT+LLRPVELKLVP+ALEGSAFRSKFLD DELM Y S FATFSG VPKW++KT+ V
Sbjct: 984  KVAEKTALLRPVELKLVPVALEGSAFRSKFLDVDELMSYCSWFATFSGFVPKWMRKTKLV 1043

Query: 80   KKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLD 125
            KK++K LVNHLGLTL+KEDLQNVVDLMEPYGQISNGIE LNPPLD
Sbjct: 1044 KKVSKTLVNHLGLTLTKEDLQNVVDLMEPYGQISNGIEFLNPPLD 1088

[Close]
BLAST of Cla000624 vs. TrEMBL
Match: W9RHH7_9ROSA (ATP-dependent zinc metalloprotease FtsH OS=Morus notabilis GN=L484_024479 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-42
Identity = 87/105 (82.86%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 20   QVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTRTV 79
            +VAEKT+LLRP+ELKLVP+ALEGSAFRSKFLD DELM Y   FATFSG +P W++KT+ V
Sbjct: 967  KVAEKTALLRPIELKLVPVALEGSAFRSKFLDMDELMSYCGWFATFSGFIPGWLRKTKIV 1026

Query: 80   KKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLD 125
            KKL+KMLVNHLGLTL+KEDLQNVVDLMEPYGQISNGIELLNPPLD
Sbjct: 1027 KKLSKMLVNHLGLTLTKEDLQNVVDLMEPYGQISNGIELLNPPLD 1071

[Close]
BLAST of Cla000624 vs. TrEMBL
Match: V4VE66_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100305692mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.8e-42
Identity = 86/105 (81.90%), Postives = 98/105 (93.33%), Query Frame = 1 

Query: 20  QVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTRTV 79
           +VAEKT+LLRP+ELKLVP+ALEGSAFRSKFLDTDELM Y   FATFSG+VPKW +KT+ V
Sbjct: 23  KVAEKTALLRPIELKLVPVALEGSAFRSKFLDTDELMSYCGWFATFSGVVPKWFRKTKIV 82

Query: 80  KKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLD 125
           KK+++MLV+HLGLTL+KEDLQNVVDLMEPYGQISNGIELL PPLD
Sbjct: 83  KKISRMLVDHLGLTLTKEDLQNVVDLMEPYGQISNGIELLTPPLD 127

[Close]
BLAST of Cla000624 vs. TrEMBL
Match: A0A067EDF6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0355612mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.8e-42
Identity = 86/105 (81.90%), Postives = 98/105 (93.33%), Query Frame = 1 

Query: 20  QVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTRTV 79
           +VAEKT+LLRP+ELKLVP+ALEGSAFRSKFLDTDELM Y   FATFSG+VPKW +KT+ V
Sbjct: 495 KVAEKTALLRPIELKLVPVALEGSAFRSKFLDTDELMSYCGWFATFSGVVPKWFRKTKIV 554

Query: 80  KKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLD 125
           KK+++MLV+HLGLTL+KEDLQNVVDLMEPYGQISNGIELL PPLD
Sbjct: 555 KKISRMLVDHLGLTLTKEDLQNVVDLMEPYGQISNGIELLTPPLD 599

[Close]
BLAST of Cla000624 vs. NCBI nr
Match: gi|700211650|gb|KGN66746.1| (hypothetical protein Csa_1G673530 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 1.0e-45
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 1 

Query: 18  KLQVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTR 77
           +L+VAEKT+LLRPVELK VPLALE SAFRSKFLDTDEL+ Y S FATFSG+VP+WVQKTR
Sbjct: 108 QLKVAEKTALLRPVELKRVPLALEASAFRSKFLDTDELISYCSWFATFSGVVPEWVQKTR 167

Query: 78  TVKKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLDV 126
            VKKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLDV
Sbjct: 168 IVKKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLDV 215

[Close]
BLAST of Cla000624 vs. NCBI nr
Match: gi|449449669|ref|XP_004142587.1| (PREDICTED: uncharacterized protein LOC101207174 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44
Identity = 94/105 (89.52%), Postives = 99/105 (94.29%), Query Frame = 1 

Query: 20   QVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTRTV 79
            +VAEKT+LLRPVELK VPLALE SAFRSKFLDTDEL+ Y S FATFSG+VP+WVQKTR V
Sbjct: 991  KVAEKTALLRPVELKRVPLALEASAFRSKFLDTDELISYCSWFATFSGVVPEWVQKTRIV 1050

Query: 80   KKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLD 125
            KKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLD
Sbjct: 1051 KKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLD 1095

[Close]
BLAST of Cla000624 vs. NCBI nr
Match: gi|659086122|ref|XP_008443775.1| (PREDICTED: uncharacterized protein LOC103487285 [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 5.7e-44
Identity = 93/105 (88.57%), Postives = 99/105 (94.29%), Query Frame = 1 

Query: 20   QVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTRTV 79
            +VAEKT+LLRP+EL+LVPLALEGSAFRSK LD DELMGY S FATF  IVP+WVQKTRTV
Sbjct: 986  KVAEKTALLRPMELQLVPLALEGSAFRSKILDADELMGYCSWFATFRDIVPEWVQKTRTV 1045

Query: 80   KKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLD 125
            KKLNKMLVNHLGLTLSKEDLQ+VVDLMEPYGQISNGIELLNPPLD
Sbjct: 1046 KKLNKMLVNHLGLTLSKEDLQSVVDLMEPYGQISNGIELLNPPLD 1090

[Close]
BLAST of Cla000624 vs. NCBI nr
Match: gi|225451340|ref|XP_002274609.1| (PREDICTED: uncharacterized protein LOC100248755 [Vitis vinifera])

HSP 1 Score: 179.5 bits (454), Expect = 4.1e-42
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 20   QVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTRTV 79
            +VAEKT+LLRPVELKLVP+ALEGSAFRSKFLD DELM Y S FATFSG VPKW++KT+ V
Sbjct: 984  KVAEKTALLRPVELKLVPVALEGSAFRSKFLDVDELMSYCSWFATFSGFVPKWMRKTKLV 1043

Query: 80   KKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLD 125
            KK++K LVNHLGLTL+KEDLQNVVDLMEPYGQISNGIE LNPPLD
Sbjct: 1044 KKVSKTLVNHLGLTLTKEDLQNVVDLMEPYGQISNGIEFLNPPLD 1088

[Close]
BLAST of Cla000624 vs. NCBI nr
Match: gi|703120875|ref|XP_010102198.1| (ATP-dependent zinc metalloprotease FtsH [Morus notabilis])

HSP 1 Score: 179.1 bits (453), Expect = 5.3e-42
Identity = 87/105 (82.86%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 20   QVAEKTSLLRPVELKLVPLALEGSAFRSKFLDTDELMGYSSLFATFSGIVPKWVQKTRTV 79
            +VAEKT+LLRP+ELKLVP+ALEGSAFRSKFLD DELM Y   FATFSG +P W++KT+ V
Sbjct: 967  KVAEKTALLRPIELKLVPVALEGSAFRSKFLDMDELMSYCGWFATFSGFIPGWLRKTKIV 1026

Query: 80   KKLNKMLVNHLGLTLSKEDLQNVVDLMEPYGQISNGIELLNPPLD 125
            KKL+KMLVNHLGLTL+KEDLQNVVDLMEPYGQISNGIELLNPPLD
Sbjct: 1027 KKLSKMLVNHLGLTLTKEDLQNVVDLMEPYGQISNGIELLNPPLD 1071

The following BLAST results are available for this feature:
BLAST of Cla000624 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FTSI5_ARATH8.5e-4075.24Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=A... [more]
BLAST of Cla000624 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M3D4_CUCSA7.2e-4688.89Uncharacterized protein OS=Cucumis sativus GN=Csa_1G673530 PE=3 SV=1[more]
D7TUI7_VITVI2.8e-4283.81Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g02190 PE=4 SV=... [more]
W9RHH7_9ROSA3.7e-4282.86ATP-dependent zinc metalloprotease FtsH OS=Morus notabilis GN=L484_024479 PE=4 S... [more]
V4VE66_9ROSI4.8e-4281.90Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100305692mg PE... [more]
A0A067EDF6_CITSI4.8e-4281.90Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0355612mg PE=4 ... [more]
BLAST of Cla000624 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211650|gb|KGN66746.1|1.0e-4588.89hypothetical protein Csa_1G673530 [Cucumis sativus][more]
gi|449449669|ref|XP_004142587.1|1.1e-4489.52PREDICTED: uncharacterized protein LOC101207174 [Cucumis sativus][more]
gi|659086122|ref|XP_008443775.1|5.7e-4488.57PREDICTED: uncharacterized protein LOC103487285 [Cucumis melo][more]
gi|225451340|ref|XP_002274609.1|4.1e-4283.81PREDICTED: uncharacterized protein LOC100248755 [Vitis vinifera][more]
gi|703120875|ref|XP_010102198.1|5.3e-4282.86ATP-dependent zinc metalloprotease FtsH [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0042981 regulation of apoptotic process
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005730 nucleolus
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed RNA polymerase activity
molecular_function GO:0004222 metalloendopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla000624Cla000624.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23076METALLOPROTEASE M41 FTSHcoord: 84..124
score: 1.2
NoneNo IPR availablePANTHERPTHR23076:SF58FTSH EXTRACELLULAR PROTEASE FAMILY PROTEINcoord: 84..124
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla000624Cla97C03G060910Watermelon (97103) v2wmwmbB126
Cla000624Csa1G673530Cucumber (Chinese Long) v2cuwmB018
Cla000624CSPI01G33100Wild cucumber (PI 183967)cpiwmB020
Cla000624Cucsa.027450Cucumber (Gy14) v1cgywmB713
Cla000624CsGy1G031890Cucumber (Gy14) v2cgybwmB021
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla000624Watermelon (Charleston Gray)wcgwmB225