ClCG11G016780 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G016780
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Adhesive/proline-rich protein
Location	CG_Chr11 : 30101510 .. 30103013 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCACCTACTTTCTTTGTCTTCATATTCTCTCTTCCTTTCACGCGGTTTCGCCGCCCTTGGTCGGCCCCTCTCCCACACCACTCTCTCCGCCGCCTCCAAATCTCTCCCCACGTATATATATATACACACAATATCCACTCTTTCTCAAAGCATCAAACTTAAAGAAGAAAAAAAAAAAAAAAGGAATTATTTCTGAATTTCCTTTTCTCTTCTCTCAAGACTTGAATTTTTAATTTTTATTTCATCTCTCTGATCTCTTGTAAACATGAGTTCCGCTCAGCCTGCAGGTGATCAATCGATTTTGATTTTATATTTGTAACTTATTTGAGATTAATTCTATGCGATTGAATTTATATATAATTTTGGATTTTTTTGGGGGGGTTTTGTGTAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATGCAGCCCCACCCCCGGCGGGGTATCCGATGAGAGACGGCGGAGATTTCTCTCAACAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGGTAATTACCAATTATCAATTATATTAATACTTTAAAATTCGAAATTAAACGTTATAAAGAAATTGAAAGAAAAAAAAAAAAAGATTCCTTTTTATATTTCTAAATATTGCCAAAATTTTAATATTTTATGATAGAAAATTTCTGTTCTTCCCAACCCAATCAAGAGAAGATTAGCATTTTTCTAAGAAATTTTTGTGAAGTAGTGGTATATAAATAATTAATTGTTTTTATTTCTTTTAATTAAAAAGAATTGTATCACCTCTGTCCTAATATCATTAGTGCACCTTCTCATGTATCTCATTTTCTTTCCTAATAATAGTGATAAAAATGATTTTTTTAAATATAGAAAAATAAACTAAAATATATATAAATGTAATAAAATTTTAATATCATAGATTTTGGTAGACCGCCATAAATTACTATTTGTGTTTATCAATGTTTATCGTAATATTTTACTATTATTTATAAATATTTTCAATCGTTTTATCATTTAAAATAATTTTAATAATAATTGATGATCTAAACAAATAGAAATCACATTCTTATTTTTAGTTTAGTACAGAATAATATTGAAAACGTTTGTAGAATATGAGTAATGGGAACTGTTATTAAATATTTAGGTAAACATTAAAAACGAGAAAGAAGTTTAACAAAGGAGTCTTAAAATTTTAATTTATATTTATATATAAAATTGAAATTTTGTGTTTGCAGTTGTGCTGCGTTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAATCACTACAAGTTCAGACAACAAATTCTTAGAGATGATCGATATATCAGCAGACTCATTGTCATTTTAGTGTTTTAATTTTAACTTTTCCTCCTCTTTTTTTTTTTTTTTCTCTTTTTCTTTTTAGTTTTCTAATTTTGTGAATTTTTGGATTAATTATGTGATGATGTTGTTCTAATAAATTTGGTTGGACTTCTGTGATCATA

mRNA sequence

AGCACCTACTTTCTTTGTCTTCATATTCTCTCTTCCTTTCACGCGGTTTCGCCGCCCTTGGTCGGCCCCTCTCCCACACCACTCTCTCCGCCGCCTCCAAATCTCTCCCCACGTATATATATATACACACAATATCCACTCTTTCTCAAAGCATCAAACTTAAAGAAGAAAAAAAAAAAAAAAGGAATTATTTCTGAATTTCCTTTTCTCTTCTCTCAAGACTTGAATTTTTAATTTTTATTTCATCTCTCTGATCTCTTGTAAACATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATGCAGCCCCACCCCCGGCGGGGTATCCGATGAGAGACGGCGGAGATTTCTCTCAACAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCGTTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAATCACTACAAGTTCAGACAACAAATTCTTAGAGATGATCGATATATCAGCAGACTCATTGTCATTTTAGTGTTTTAATTTTAACTTTTCCTCCTCTTTTTTTTTTTTTTTCTCTTTTTCTTTTTAGTTTTCTAATTTTGTGAATTTTTGGATTAATTATGTGATGATGTTGTTCTAATAAATTTGGTTGGACTTCTGTGATCATA

Coding sequence (CDS)

ATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATGCAGCCCCACCCCCGGCGGGGTATCCGATGAGAGACGGCGGAGATTTCTCTCAACAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCGTTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAA

Protein sequence

MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

Homology

[Close]

BLAST of ClCG11G016780 vs. Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.4e-08
Identity = 30/76 (39.47%), Postives = 33/76 (43.42%), Query Frame = 1


Query: 6  PAGVYPPPSTVPTSYAAP--PPAGYPMRDGGDFS-------QQPAPVPAETKSRGDGFWK 65
          P   YPP    P  Y     PP GYP +             Q P P   + +    GF +
Sbjct: 23 PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQYPPPPQHQQQQSSPGFLE 82

Query: 66 GCCAALCCCCVLDACF 73
          GC AALCCCC+LDACF
Sbjct: 83 GCLAALCCCCLLDACF 98

[Close]

BLAST of ClCG11G016780 vs. Swiss-Prot
Match: CYT1B_ARATH (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 3.8e-07
Identity = 29/80 (36.25%), Postives = 32/80 (40.00%), Query Frame = 1


Query: 6   PAGVYPPPSTVPTSYAAPPPAGYPMR-------------DGGDFSQQPAPVPAETKSRGD 65
           P   YPPP         PPP GYP +             + G   Q   P   + +    
Sbjct: 22  PKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYPEQGYPQQGYPPQQQQQQKHSP 81

Query: 66  GFWKGCCAALCCCCVLDACF 73
           G  +GC AALCC CVLDACF
Sbjct: 82  GMLEGCIAALCCYCVLDACF 101

[Close]

BLAST of ClCG11G016780 vs. TrEMBL
Match: A0A0A0L4C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618410 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 8.4e-30
Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 1


Query: 1  MSSAQPAGV-YPPPS-TVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGC 60
          MSSAQPAGV YPPPS TVPTSY+APPPAGYP R+GGDFS    PVPAETKSRGDGFWKGC
Sbjct: 1  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS---TPVPAETKSRGDGFWKGC 60

Query: 61 CAALCCCCVLDACF 73
          CAALCCCCVLDACF
Sbjct: 61 CAALCCCCVLDACF 71

[Close]

BLAST of ClCG11G016780 vs. TrEMBL
Match: A9P8U8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.1e-21
Identity = 51/74 (68.92%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 1  MSSAQPAGVYPPP--STVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGC 60
          MS  Q    YPPP  ST P++Y+APPPAGYP  DG    Q P PV  ETKSRGDGFWKGC
Sbjct: 1  MSQNQATVAYPPPPASTGPSAYSAPPPAGYPTMDGQTCQQDPIPV--ETKSRGDGFWKGC 60

Query: 61 CAALCCCCVLDACF 73
          CAALCCCC LDACF
Sbjct: 61 CAALCCCCALDACF 72

[Close]

BLAST of ClCG11G016780 vs. TrEMBL
Match: B9HD68_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02240g PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.4e-21
Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 1  MSSAQPAGVYPPP--STVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGC 60
          MS  Q    YPPP  ST P++Y+ PPPAGYP  DG   S Q  P+P +TKSRGDGFWKGC
Sbjct: 1  MSQNQATVAYPPPPTSTYPSAYSGPPPAGYPTMDGQ--SDQQNPIPVKTKSRGDGFWKGC 60

Query: 61 CAALCCCCVLDACF 73
          CAALCCCC+ DACF
Sbjct: 61 CAALCCCCLCDACF 72

[Close]

BLAST of ClCG11G016780 vs. TrEMBL
Match: M0U4Y1_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.4e-21
Identity = 50/67 (74.63%), Postives = 50/67 (74.63%), Query Frame = 1


Query: 6  PAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCC 65
          P   YPPP   PT Y APPPAGYP RDGG  S   APVP ETKSRGDGFWKGCCAALCCC
Sbjct: 22 PPSSYPPPEQAPT-YVAPPPAGYPTRDGGLSS---APVPIETKSRGDGFWKGCCAALCCC 81

Query: 66 CVLDACF 73
           VLD CF
Sbjct: 82 WVLDVCF 84

[Close]

BLAST of ClCG11G016780 vs. TrEMBL
Match: A0A059DE68_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00899 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.0e-20
Identity = 48/65 (73.85%), Postives = 52/65 (80.00%), Query Frame = 1


Query: 10 YPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAP--VPAETKSRGDGFWKGCCAALCCCCV 69
          YPPP++   +Y APPP GYPMRDG    QQPA   VP ETK+RGDGFWKGCCAALCCCCV
Sbjct: 14 YPPPAST-MAYVAPPPPGYPMRDG----QQPAQNAVPIETKTRGDGFWKGCCAALCCCCV 73

Query: 70 LDACF 73
          LDACF
Sbjct: 74 LDACF 73

[Close]

BLAST of ClCG11G016780 vs. TAIR10
Match: AT3G22240.1 (AT3G22240.1 unknown protein)

HSP 1 Score: 87.8 bits (216), Expect = 2.9e-18
Identity = 40/66 (60.61%), Postives = 41/66 (62.12%), Query Frame = 1


Query: 9  VYPPPSTVPTSYAAPPPAGYPMRDG--GDFSQQPAPVPAETKSRGDGFWKGCCAALCCCC 68
          V  P  T    Y +PPP GYP RD   GD    P     ETKS+GDGFWKGCCAA+CCCC
Sbjct: 11 VEKPSQTSSGPYTSPPPIGYPTRDAMVGD----PPAAAVETKSKGDGFWKGCCAAICCCC 70

Query: 69 VLDACF 73
          VLDACF
Sbjct: 71 VLDACF 72

[Close]

BLAST of ClCG11G016780 vs. TAIR10
Match: AT2G32210.1 (AT2G32210.1 unknown protein)

HSP 1 Score: 83.6 bits (205), Expect = 5.6e-17
Identity = 38/71 (53.52%), Postives = 40/71 (56.34%), Query Frame = 1


Query: 2  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAA 61
          S  Q +G YP P      Y APPP GYP  D    +        ETKS+GDGF KGC AA
Sbjct: 5  SQNQSSGAYPTPPVSTGPYVAPPPLGYPTND----TSHATVATVETKSKGDGFLKGCLAA 64

Query: 62 LCCCCVLDACF 73
          +CCCCVLDACF
Sbjct: 65 MCCCCVLDACF 71

[Close]

BLAST of ClCG11G016780 vs. TAIR10
Match: AT2G32190.1 (AT2G32190.1 unknown protein)

HSP 1 Score: 83.2 bits (204), Expect = 7.3e-17
Identity = 38/71 (53.52%), Postives = 39/71 (54.93%), Query Frame = 1


Query: 2  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAA 61
          S  Q +G YP P      Y  PPP GYP  D           P ETKS+GDGF KGC AA
Sbjct: 5  SQNQSSGAYPTPPVSTGPYMTPPPLGYPTSD----ISHATVAPVETKSKGDGFLKGCLAA 64

Query: 62 LCCCCVLDACF 73
          +CCCCVLDACF
Sbjct: 65 MCCCCVLDACF 71

[Close]

BLAST of ClCG11G016780 vs. TAIR10
Match: AT1G05340.1 (AT1G05340.1 unknown protein)

HSP 1 Score: 73.9 bits (180), Expect = 4.4e-14
Identity = 36/68 (52.94%), Postives = 39/68 (57.35%), Query Frame = 1


Query: 5  QPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCC 64
          Q AG  PPP  + T  + PPP GYP       S     V  ETKS+GDGF+KGC AA+CC
Sbjct: 8  QSAGANPPPP-MSTCTSPPPPIGYPTNQPSHGSVAQGKV--ETKSKGDGFFKGCLAAMCC 67

Query: 65 CCVLDACF 73
          CC LD CF
Sbjct: 68 CCALDICF 72

[Close]

BLAST of ClCG11G016780 vs. TAIR10
Match: AT2G32200.1 (AT2G32200.1 unknown protein)

HSP 1 Score: 70.1 bits (170), Expect = 6.4e-13
Identity = 36/73 (49.32%), Postives = 37/73 (50.68%), Query Frame = 1


Query: 2  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRG---DGFWKGC 61
          S  Q AG YP P      Y APPP GYP  D    +      P ETKS+G   DGF KGC
Sbjct: 5  SQNQYAGAYPTPPVSTGPYVAPPPLGYPTND----TTHATVAPVETKSKGEAADGFLKGC 64

Query: 62 CAALCCCCVLDAC 72
           A +  CCVLDAC
Sbjct: 65 LATMLACCVLDAC 73

[Close]

BLAST of ClCG11G016780 vs. NCBI nr
Match: gi|659129418|ref|XP_008464677.1| (PREDICTED: CYSTM1 family protein B [Cucumis melo])

HSP 1 Score: 143.3 bits (360), Expect = 1.7e-31
Identity = 68/74 (91.89%), Postives = 69/74 (93.24%), Query Frame = 1


Query: 1  MSSAQPAGV-YPPPS-TVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGC 60
          MSSAQPAGV YPPPS TVPTSY+APPPAGYP RDGGDFSQ P PVPAETKSRGDGFWKGC
Sbjct: 1  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQ-PNPVPAETKSRGDGFWKGC 60

Query: 61 CAALCCCCVLDACF 73
          CAALCCCCVLDACF
Sbjct: 61 CAALCCCCVLDACF 73

[Close]

BLAST of ClCG11G016780 vs. NCBI nr
Match: gi|700199818|gb|KGN54976.1| (hypothetical protein Csa_4G618410 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-29
Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 1


Query: 1  MSSAQPAGV-YPPPS-TVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGC 60
          MSSAQPAGV YPPPS TVPTSY+APPPAGYP R+GGDFS    PVPAETKSRGDGFWKGC
Sbjct: 1  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS---TPVPAETKSRGDGFWKGC 60

Query: 61 CAALCCCCVLDACF 73
          CAALCCCCVLDACF
Sbjct: 61 CAALCCCCVLDACF 71

[Close]

BLAST of ClCG11G016780 vs. NCBI nr
Match: gi|118481723|gb|ABK92801.1| (unknown [Populus trichocarpa])

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-21
Identity = 51/74 (68.92%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 1  MSSAQPAGVYPPP--STVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGC 60
          MS  Q    YPPP  ST P++Y+APPPAGYP  DG    Q P PV  ETKSRGDGFWKGC
Sbjct: 1  MSQNQATVAYPPPPASTGPSAYSAPPPAGYPTMDGQTCQQDPIPV--ETKSRGDGFWKGC 60

Query: 61 CAALCCCCVLDACF 73
          CAALCCCC LDACF
Sbjct: 61 CAALCCCCALDACF 72

[Close]

BLAST of ClCG11G016780 vs. NCBI nr
Match: gi|672139593|ref|XP_008793583.1| (PREDICTED: CYSTM1 family protein A [Phoenix dactylifera])

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-21
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 1


Query: 6  PAGVYPPPSTV-PTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCC 65
          PA  YPPP    P +YAAPPPA YPM++GG+    P P PA+T++RGDGFWKGCCAALCC
Sbjct: 17 PANAYPPPGQAYPPAYAAPPPASYPMKEGGE---NPQPAPAQTQNRGDGFWKGCCAALCC 76

Query: 66 CCVLDACF 73
          CCVLD CF
Sbjct: 77 CCVLDMCF 81

[Close]

BLAST of ClCG11G016780 vs. NCBI nr
Match: gi|224089821|ref|XP_002308824.1| (hypothetical protein POPTR_0006s02240g [Populus trichocarpa])

HSP 1 Score: 107.8 bits (268), Expect = 7.8e-21
Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 1  MSSAQPAGVYPPP--STVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGC 60
          MS  Q    YPPP  ST P++Y+ PPPAGYP  DG   S Q  P+P +TKSRGDGFWKGC
Sbjct: 1  MSQNQATVAYPPPPTSTYPSAYSGPPPAGYPTMDGQ--SDQQNPIPVKTKSRGDGFWKGC 60

Query: 61 CAALCCCCVLDACF 73
          CAALCCCC+ DACF
Sbjct: 61 CAALCCCCLCDACF 72

The following BLAST results are available for this feature:

BLAST of ClCG11G016780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYT1A_ARATH	3.4e-08	39.47	Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thali...	[more]
CYT1B_ARATH	3.8e-07	36.25	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]

BLAST of ClCG11G016780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4C6_CUCSA	8.4e-30	87.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618410 PE=4 SV=1	[more]
A9P8U8_POPTR	1.1e-21	68.92	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
B9HD68_POPTR	5.4e-21	64.86	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02240g PE=4 SV=1	[more]
M0U4Y1_MUSAM	5.4e-21	74.63	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
A0A059DE68_EUCGR	6.0e-20	73.85	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00899 PE=4 SV=1	[more]

BLAST of ClCG11G016780 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22240.1	2.9e-18	60.61	unknown protein	[more]
AT2G32210.1	5.6e-17	53.52	unknown protein	[more]
AT2G32190.1	7.3e-17	53.52	unknown protein	[more]
AT1G05340.1	4.4e-14	52.94	unknown protein	[more]
AT2G32200.1	6.4e-13	49.32	unknown protein	[more]

BLAST of ClCG11G016780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129418\|ref\|XP_008464677.1\|	1.7e-31	91.89	PREDICTED: CYSTM1 family protein B [Cucumis melo]	[more]
gi\|700199818\|gb\|KGN54976.1\|	1.2e-29	87.84	hypothetical protein Csa_4G618410 [Cucumis sativus]	[more]
gi\|118481723\|gb\|ABK92801.1\|	1.6e-21	68.92	unknown [Populus trichocarpa]	[more]
gi\|672139593\|ref\|XP_008793583.1\|	1.6e-21	67.65	PREDICTED: CYSTM1 family protein A [Phoenix dactylifera]	[more]
gi\|224089821\|ref\|XP_002308824.1\|	7.8e-21	64.86	hypothetical protein POPTR_0006s02240g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR028144	CYSTM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0003006	developmental process involved in reproduction
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G016780.1	ClCG11G016780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028144	Cysteine-rich transmembrane CYSTM domain	PFAM	PF12734	CYSTM	coord: 23..72 score: 4.2
None	No IPR available	PANTHER	PTHR31568	FAMILY NOT NAMED	coord: 10..72 score: 5.4
None	No IPR available	PANTHER	PTHR31568:SF17	EXPRESSED PROTEIN	coord: 10..72 score: 5.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG11G016780	MELO3C026402	Melon (DHL92) v3.5.1	mewcgB458
ClCG11G016780	Cla97C11G222710	Watermelon (97103) v2	wcgwmbB064
ClCG11G016780	Bhi09G002967	Wax gourd	wcgwgoB181
ClCG11G016780	CSPI04G21950	Wild cucumber (PI 183967)	cpiwcgB289
ClCG11G016780	Cucsa.058470	Cucumber (Gy14) v1	cgywcgB047
ClCG11G016780	CmaCh09G007090	Cucurbita maxima (Rimu)	cmawcgB016
ClCG11G016780	Lsi04G019200	Bottle gourd (USVL1VR-Ls)	lsiwcgB259
ClCG11G016780	Cp4.1LG06g05550	Cucurbita pepo (Zucchini)	cpewcgB695
ClCG11G016780	CsGy4G020460	Cucumber (Gy14) v2	cgybwcgB259
ClCG11G016780	MELO3C026402.2	Melon (DHL92) v3.6.1	medwcgB451
ClCG11G016780	CsaV3_4G032300	Cucumber (Chinese Long) v3	cucwcgB288

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G016780	Silver-seed gourd	carwcgB0621
ClCG11G016780	Cucumber (Chinese Long) v3	cucwcgB295
ClCG11G016780	Cucurbita maxima (Rimu)	cmawcgB390
ClCG11G016780	Cucurbita maxima (Rimu)	cmawcgB394
ClCG11G016780	Cucurbita moschata (Rifu)	cmowcgB009
ClCG11G016780	Cucurbita moschata (Rifu)	cmowcgB387
ClCG11G016780	Cucumber (Chinese Long) v2	cuwcgB279
ClCG11G016780	Watermelon (97103) v1	wcgwmB103
ClCG11G016780	Cucurbita pepo (Zucchini)	cpewcgB488
ClCG11G016780	Cucurbita pepo (Zucchini)	cpewcgB492