ClCG11G001050 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G001050
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	40S ribosomal protein S5, putative
Location	CG_Chr11 : 1321127 .. 1324556 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTATAAAAATGAGGGTGGTGGTGTGCATGATGGGGTTTTGAAGAGTCTAAAATATAGGGGCCATGCTTTTGGAGAAGGTGACAATTTTATTGTGTTGCCATTAGAAAATTTGAAAAGCTCCGGCAATTTTTGAGGTCTGTTGGGACAGATGATGGGGTTTATATATTAAACGCACACTTTCTTGGCTAACTACCCTTTCAATTCCCACTTTACAAATTACCAATAATTAAAACATAATTATCTTTGTTTCTTTCTCTTTAATTTGGTTGTCATTTGTGTATGCATGGTGTGATTAATATTTGTATGACTTTATGCACTTCCAGACTTGGATCACCTTACCGTTCATAAACATTATAAACTTTCATCTCCCATCCCTCAAGATTTGTCCGAGATTAAAGACGAGTTGGTAACAATATAATGAAACACATTTTAATTTTTATTAAGATTAAATTTTAAATTTTAAATAGTTATAATCACTTTTTATCATTTTTAAATTAAACATGTTTTTTATAATTCAAACTTAAATCAAATTCAATGGTATGATAATGATGTTTTAGAGGTCATCTCATTCCATGAAAATGTGTGGTGAGAGAATCTCATCCCATCTCATAAAAGTGTGTTGTGAGAGAAGATTCATTCTTGAAAAAGGAGAGTCAACCTAGGAAAGCACTACCAATCTCGAGGCATTTTGAGTTGTATTTCCAACATCATTTAATTGATTTATTTCCTTCTAGAACGTTATTTTGTACCTATGATTTCTGATTGAATGGAGTTCATTTTTTATCATTGGTAATGAGTTAAATCCTCCTGGGGGTTCGACAATGTGGATGCCCTAGGCTTGTTATGGCTTAAGTAATGTTTACAAATATAGCAAAATTTTACTGTGTATTTTGCTATTAGTCGTAAATATTTTCAGCAGTTTTGTCATTTAAGATAATTTTTCATATGTTAACTTGTTTCAAAATCATTAAAGATTTATTTACTAATTTAAATTTAATTTTTTTAATTTTTTTTATAAATTTTTTCAAAACTATCCATCAAAATCTACATTGTAGGACATCAAATTTTTTATTTTTTATTTTTATTTTTATTATTATTATTATTATTTTAAATTAAGACTTCTATTTTAAGTCGACATCAATATTTTAAACTTGGATGATAGTATATATATAATATTTGATTTTAGGGTTTTTTCCTTCCCCGTTTCCCTCCCACTATTTCAGCCGCCTCCTTCCCCATTTTTTTTCTAGGGCTAAATACAAACACATTCCTCCGCTTGCAGCCGATTACTATTCGTCTTCCTCACCCTTCCACTTTCCTCCTTTGCTCGGCGGCCTACTACGGTAACACCCTCCCCTTCATACTTTTGATTCTGTTAAGCCTCTGGTTGTTGCTCTTATTGTTATTGTTTTTCTATGGAGTTCTTCAGTATTATAGGTAAATTTTACTTTTTTTGCGAGTAACTGCGGGTTTTTCGAGTTTTTTTGTTTCTGATATTTGCAGGAATTGGTCGAAGTATATATATATTCTCCGTTCCTTGGATTGAAATACTAGATCTATTATGTTTCTATCACTCTTGTTCATATTAGTTTTACCTCTCCTGCACTGGTATGAATAAAATGGATCTGATCTTTTAAGACCCATCTCTTCTGGGGAAGTTTGAACTCTTGCTGATAACTCCTTTCTCACTCAAGCTGTAAAGAAATGATGTTGGGATTAAGATAAGCCATGGACGAAAGTTCTGGAATATAATGTTATGTTCTAATTATTTCAGTTATATGCATTTGTATCCAATTTACTCCCTGGTTGTGAGTATGCCTACTATTGACCATAGTGTTTTCTCCAGTTTGTAGTGCACTTAACTTGTACAACTTTATATTAGCACACTTAACATGTTGTTTATAGAGAGTATACTGAGCACTTAGGGATGCCCTATTGAGTCATGGGGAGTTTTCGTTTTACAGACAGACAGATACTAAGATTTTTGGCCGAGCTTGACCCCTGTTTTATTCTTTTTTCTTTTTTCTTTATTTTTATAGGAAGCTCTGGCTGTCAAAATTATATTATGTGATCATTGACATATTAATCTATCATTAGGGAATTGAATAATACGAAGTAAAGTCTTATTTATCTAATTTTTTTAGTTTGGATTTATTACTTTTGTTGAAAAGCATGATTGTTAATGAAATCCATAGACATTTGTGGAAATTTGTCTCAGGTGTTTCTCTCTCTGTGCTTTTTCTTCTCACTATATTTTCCATTCGGAATGGGGGTATTTGCTTCTTGGAGAATGTGTGGATTGGTGATAGTCGTCTTTTTCATTTTCATTGCCTTTATAATTTCTCTCTGGAAAAATGTATTTGGCTTCTCTTTGCAACTTTTGTGCTGCAACTGTGTTTTATGACGCCAATTTGAGGAGAAATTTGAACAATAGAGTCCCTGATCCCTCCTATCATCTGGTTTTTTGGGAGGTCTCTCTCTGGCCTAGTGTGGGAGATGGGAGAATGAGGAACCCTTTATTAGAAATGGTCCTATTCTTATGGTGCTTCTCATTTATCACCTTTACAGTTGAACCTTATTAGGTTTTTGAATTCGTGATATTGCCTGCATTTTTTGGGGTGAAAATTGTGGCCTTTTATAAGTTAAGGCTAGAGACAGGATGTTCTGGAGTAACATTTGAGTGTTGAAGTTTATGACCATCTAATTTGCACAAGGGAGAATGAAAATGATTAGGTATCTGGATACACATTACATGATTTATCCATCTAGTGCTCACCTTTTCTTTGTTCTGATATTCTTCAGGAATAATGGCTGTCGAAGTTGATGTGGTAAACCAGGAGCTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATAGGTGGACCTTTGATGATGTTCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCTCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACGAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATTATCAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAATCCAATTCAAGTCATTGTCGACGCCGTTGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCGGCTGGTGTTGTAAGACGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCAGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCGAAGGCCAAT

mRNA sequence

ATGAGTTATAAAAATGAGGGTGGTGGTGTGCATGATGGGGTTTTGAAGAGTCTAAAATATAGGGGCCATGCTTTTGGAGAAGGGCTAAATACAAACACATTCCTCCGCTTGCAGCCGATTACTATTCGTCTTCCTCACCCTTCCACTTTCCTCCTTTGCTCGGCGGCCTACTACGGAATAATGGCTGTCGAAGTTGATGTGGTAAACCAGGAGCTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATAGGTGGACCTTTGATGATGTTCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCTCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACGAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATTATCAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAATCCAATTCAAGTCATTGTCGACGCCGTTGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCGGCTGGTGTTGTAAGACGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCAGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCGAAGGCCAAT

Coding sequence (CDS)

ATGAGTTATAAAAATGAGGGTGGTGGTGTGCATGATGGGGTTTTGAAGAGTCTAAAATATAGGGGCCATGCTTTTGGAGAAGGGCTAAATACAAACACATTCCTCCGCTTGCAGCCGATTACTATTCGTCTTCCTCACCCTTCCACTTTCCTCCTTTGCTCGGCGGCCTACTACGGAATAATGGCTGTCGAAGTTGATGTGGTAAACCAGGAGCTGACCCAGCCTCATCACGATGTGAAGCTGTTCAATAGGTGGACCTTTGATGATGTTCAGGTGAATGACATCTCTCTGGTTGATTACATTGGGGTTGCACCTGCCAAGCATGCCACCTATGTCCCTCACACTGCTGGGAGGTACTCTGTCAAGCGTTTTCGAAAAGCTCAGTGCCCAATTGTGGAGAGGCTCACGAATTCACTGATGATGCATGGCCGAAACAATGGGAAGAAACTCATGGCTGTCAGGATTATCAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAATCCAATTCAAGTCATTGTCGACGCCGTTGTTAACAGTGGACCACGTGAAGATGCTACTCGAATTGGTTCGGCTGGTGTTGTAAGACGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTTAACCAAGCAATCTATCTTCTTACGACCGGTGCTCGTGAGGCAGCCTTCAGAAATATCAAAACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGATCGTCCAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCGAAGGCCAAT

Protein sequence

MSYKNEGGGVHDGVLKSLKYRGHAFGEGLNTNTFLRLQPITIRLPHPSTFLLCSAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKAN

Homology

[Close]

BLAST of ClCG11G001050 vs. Swiss-Prot
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 4.5e-98
Identity = 182/206 (88.35%), Postives = 194/206 (94.17%), Query Frame = 1


Query: 62  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 121
           + E+D  + Q+LT   ++VKLFNRW+FDDV V DISLVDYIGV P+KHAT+VPHTAGRYS
Sbjct: 4   SAEIDAEIQQQLT---NEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 63

Query: 122 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 181
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 182 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 241
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 183

Query: 242 INAAKGSSNSYAIKKKDEIERVAKAN 267
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]

BLAST of ClCG11G001050 vs. Swiss-Prot
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 7.7e-98
Identity = 179/189 (94.71%), Postives = 185/189 (97.88%), Query Frame = 1


Query: 78  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 137
           +VKLFNRW+FDDVQ++D+SL+DYIGV P+KHATYVPHTAGRYSVKRFRKAQCPIVERLTN
Sbjct: 8   EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67

Query: 138 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 197
           SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTD NPIQVIVDAVVNSGPREDATRIGSAGVV
Sbjct: 68  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127

Query: 198 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 257
           RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIK+IAECLADELINAAKGSSNSYAIKKKD
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKD 187

Query: 258 EIERVAKAN 267
           EIERVAKAN
Sbjct: 188 EIERVAKAN 196

[Close]

BLAST of ClCG11G001050 vs. Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2)

HSP 1 Score: 355.5 bits (911), Expect = 5.0e-97
Identity = 182/206 (88.35%), Postives = 192/206 (93.20%), Query Frame = 1


Query: 62  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 121
           A +VD  + Q LT   ++VKLFNRWT+DDV V DISLVDYIGV  AKHAT+VPHTAGRYS
Sbjct: 4   AADVDAEIQQALT---NEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 63

Query: 122 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 181
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 182 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 241
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 183

Query: 242 INAAKGSSNSYAIKKKDEIERVAKAN 267
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]

BLAST of ClCG11G001050 vs. Swiss-Prot
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4)

HSP 1 Score: 311.6 bits (797), Expect = 8.2e-84
Identity = 153/189 (80.95%), Postives = 171/189 (90.48%), Query Frame = 1


Query: 78  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 137
           D+KLF +W+ DDVQ+NDISL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 138 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 197
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 198 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 257
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 258 EIERVAKAN 267
           E+ERVAK+N
Sbjct: 196 ELERVAKSN 203

[Close]

BLAST of ClCG11G001050 vs. Swiss-Prot
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3)

HSP 1 Score: 311.6 bits (797), Expect = 8.2e-84
Identity = 153/189 (80.95%), Postives = 171/189 (90.48%), Query Frame = 1


Query: 78  DVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 137
           D+KLF +W+ DDVQ+NDISL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 138 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 197
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 198 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 257
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 258 EIERVAKAN 267
           E+ERVAK+N
Sbjct: 196 ELERVAKSN 203

[Close]

BLAST of ClCG11G001050 vs. TrEMBL
Match: A0A0A0KSZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G292230 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 3.0e-109
Identity = 203/206 (98.54%), Postives = 205/206 (99.51%), Query Frame = 1


Query: 61  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 120
           MAVEVDVVNQEL QPHHDVKLFNRWTFDDVQVNDISLVDY+GVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELIQPHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYS 60

Query: 121 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 180
           VKRFRKAQCPI+ERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIIERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 181 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 240
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 241 INAAKGSSNSYAIKKKDEIERVAKAN 267
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]

BLAST of ClCG11G001050 vs. TrEMBL
Match: A0A0A0K5K0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G232530 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 6.7e-109
Identity = 202/206 (98.06%), Postives = 205/206 (99.51%), Query Frame = 1


Query: 61  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 120
           MAVE+DVVNQELTQ HHDVKLFNRWTFDDVQVNDISLVDY+GVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQSHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYS 60

Query: 121 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 180
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNP+QVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPVQVIVDAVV 120

Query: 181 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 240
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 241 INAAKGSSNSYAIKKKDEIERVAKAN 267
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]

BLAST of ClCG11G001050 vs. TrEMBL
Match: A0A0A0LRZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373440 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 8.8e-109
Identity = 203/208 (97.60%), Postives = 205/208 (98.56%), Query Frame = 1


Query: 59  GIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGR 118
           G MAVEVDVVNQELT PHHDVKLFNRWTFDDVQVNDISLVDY+GVAPAKHATYVPHTAGR
Sbjct: 76  GTMAVEVDVVNQELTLPHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGR 135

Query: 119 YSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDA 178
           YSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLN +QVIVDA
Sbjct: 136 YSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNTVQVIVDA 195

Query: 179 VVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLAD 238
           VVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLAD
Sbjct: 196 VVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLAD 255

Query: 239 ELINAAKGSSNSYAIKKKDEIERVAKAN 267
           ELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 256 ELINAAKGSSNSYAIKKKDEIERVAKAN 283

[Close]

BLAST of ClCG11G001050 vs. TrEMBL
Match: A0A0A0LVI4_CUCSA (40S ribosomal protein S5 OS=Cucumis sativus GN=Csa_1G168900 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.2e-107
Identity = 201/206 (97.57%), Postives = 203/206 (98.54%), Query Frame = 1


Query: 61  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 120
           MAVEVDV +QELTQ HHDVKLFNRWTFDDVQVNDISLVDY+GVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVASQELTQSHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYS 60

Query: 121 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 180
           VKRFRKAQCPIVER TNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERRTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 181 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 240
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 241 INAAKGSSNSYAIKKKDEIERVAKAN 267
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]

BLAST of ClCG11G001050 vs. TrEMBL
Match: W9RQK6_9ROSA (40S ribosomal protein S5 OS=Morus notabilis GN=L484_012437 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.2e-101
Identity = 189/201 (94.03%), Postives = 195/201 (97.01%), Query Frame = 1


Query: 66  DVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFR 125
           DV  Q+ +QPH DVKLFNRW+FDDVQVNDISL DYIGV PAKHATYVPHTAGRYSVKRFR
Sbjct: 3   DVSVQDPSQPHFDVKLFNRWSFDDVQVNDISLADYIGVVPAKHATYVPHTAGRYSVKRFR 62

Query: 126 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPR 185
           KAQCPIVERLTNSLMMHGRNNGKKLMAVRI++HAMEIIHLLTDLNPIQVIVDAVVNSGPR
Sbjct: 63  KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVRHAMEIIHLLTDLNPIQVIVDAVVNSGPR 122

Query: 186 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAK 245
           EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARE+AFRNIKTIAECLADELINAAK
Sbjct: 123 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK 182

Query: 246 GSSNSYAIKKKDEIERVAKAN 267
           GSSNSYAIKKKDEIERVAKAN
Sbjct: 183 GSSNSYAIKKKDEIERVAKAN 203

[Close]

BLAST of ClCG11G001050 vs. TAIR10
Match: AT2G37270.1 (AT2G37270.1 ribosomal protein 5B)

HSP 1 Score: 359.0 bits (920), Expect = 2.5e-99
Identity = 182/206 (88.35%), Postives = 194/206 (94.17%), Query Frame = 1


Query: 62  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 121
           + E+D  + Q+LT   ++VKLFNRW+FDDV V DISLVDYIGV P+KHAT+VPHTAGRYS
Sbjct: 4   SAEIDAEIQQQLT---NEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 63

Query: 122 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 181
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 182 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 241
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 183

Query: 242 INAAKGSSNSYAIKKKDEIERVAKAN 267
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]

BLAST of ClCG11G001050 vs. TAIR10
Match: AT3G11940.1 (AT3G11940.1 ribosomal protein 5A)

HSP 1 Score: 355.5 bits (911), Expect = 2.8e-98
Identity = 182/206 (88.35%), Postives = 192/206 (93.20%), Query Frame = 1


Query: 62  AVEVDV-VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 121
           A +VD  + Q LT   ++VKLFNRWT+DDV V DISLVDYIGV  AKHAT+VPHTAGRYS
Sbjct: 4   AADVDAEIQQALT---NEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 63

Query: 122 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 181
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 64  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 123

Query: 182 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 241
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 124 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 183

Query: 242 INAAKGSSNSYAIKKKDEIERVAKAN 267
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 184 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]

BLAST of ClCG11G001050 vs. TAIR10
Match: ATCG01240.1 (ATCG01240.1 ribosomal protein S7)

HSP 1 Score: 58.9 bits (141), Expect = 5.4e-09
Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 1


Query: 134 RLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGP--REDATRI 193
           RL N L+     +GKK +A +II  A++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 194 GSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 253
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 254 AIKKKDEIERVAKAN 267
           AI+KK+E  R+A+AN
Sbjct: 141 AIRKKEETHRMAEAN 148

[Close]

BLAST of ClCG11G001050 vs. TAIR10
Match: ATCG00900.1 (ATCG00900.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 58.9 bits (141), Expect = 5.4e-09
Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 1


Query: 134 RLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGP--REDATRI 193
           RL N L+     +GKK +A +II  A++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 194 GSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 253
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 254 AIKKKDEIERVAKAN 267
           AI+KK+E  R+A+AN
Sbjct: 141 AIRKKEETHRMAEAN 148

[Close]

BLAST of ClCG11G001050 vs. NCBI nr
Match: gi|659092669|ref|XP_008447164.1| (PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo])

HSP 1 Score: 411.4 bits (1056), Expect = 1.2e-111
Identity = 208/213 (97.65%), Postives = 211/213 (99.06%), Query Frame = 1


Query: 54  SAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 113
           S ++ GIMAVE+DVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP
Sbjct: 7   SLSHLGIMAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 66

Query: 114 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 173
           HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ
Sbjct: 67  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 126

Query: 174 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 233
           VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA
Sbjct: 127 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 186

Query: 234 ECLADELINAAKGSSNSYAIKKKDEIERVAKAN 267
           ECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 187 ECLADELINAAKGSSNSYAIKKKDEIERVAKAN 219

[Close]

BLAST of ClCG11G001050 vs. NCBI nr
Match: gi|659114009|ref|XP_008456864.1| (PREDICTED: 40S ribosomal protein S5-like [Cucumis melo])

HSP 1 Score: 410.2 bits (1053), Expect = 2.7e-111
Identity = 208/213 (97.65%), Postives = 210/213 (98.59%), Query Frame = 1


Query: 54  SAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 113
           S+ + G MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP
Sbjct: 40  SSTFSGTMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 99

Query: 114 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 173
           HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ
Sbjct: 100 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 159

Query: 174 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 233
           VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA
Sbjct: 160 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 219

Query: 234 ECLADELINAAKGSSNSYAIKKKDEIERVAKAN 267
           ECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 220 ECLADELINAAKGSSNSYAIKKKDEIERVAKAN 252

[Close]

BLAST of ClCG11G001050 vs. NCBI nr
Match: gi|778725851|ref|XP_011659014.1| (PREDICTED: 40S ribosomal protein S5 isoform X1 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 1.8e-110
Identity = 205/213 (96.24%), Postives = 210/213 (98.59%), Query Frame = 1


Query: 54  SAAYYGIMAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVP 113
           S ++ GIMAVE+DVVNQELTQ HHDVKLFNRWTFDDVQVNDISLVDY+GVAPAKHATYVP
Sbjct: 7   SLSHLGIMAVEIDVVNQELTQSHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVP 66

Query: 114 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQ 173
           HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNP+Q
Sbjct: 67  HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPVQ 126

Query: 174 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 233
           VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA
Sbjct: 127 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIA 186

Query: 234 ECLADELINAAKGSSNSYAIKKKDEIERVAKAN 267
           ECLADELINAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 187 ECLADELINAAKGSSNSYAIKKKDEIERVAKAN 219

[Close]

BLAST of ClCG11G001050 vs. NCBI nr
Match: gi|659092671|ref|XP_008447165.1| (PREDICTED: 40S ribosomal protein S5-like isoform X2 [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 6.7e-110
Identity = 205/206 (99.51%), Postives = 206/206 (100.00%), Query Frame = 1


Query: 61  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 120
           MAVE+DVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 121 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 180
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 181 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 240
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 241 INAAKGSSNSYAIKKKDEIERVAKAN 267
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]

BLAST of ClCG11G001050 vs. NCBI nr
Match: gi|449445316|ref|XP_004140419.1| (PREDICTED: 40S ribosomal protein S5 [Cucumis sativus])

HSP 1 Score: 402.9 bits (1034), Expect = 4.3e-109
Identity = 203/206 (98.54%), Postives = 205/206 (99.51%), Query Frame = 1


Query: 61  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 120
           MAVEVDVVNQEL QPHHDVKLFNRWTFDDVQVNDISLVDY+GVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELIQPHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYS 60

Query: 121 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 180
           VKRFRKAQCPI+ERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIIERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 181 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 240
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 241 INAAKGSSNSYAIKKKDEIERVAKAN 267
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

The following BLAST results are available for this feature:

BLAST of ClCG11G001050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RS51_ARATH	4.5e-98	88.35	40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1	[more]
RS5_CICAR	7.7e-98	94.71	40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1	[more]
RS52_ARATH	5.0e-97	88.35	40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2	[more]
RS5_HUMAN	8.2e-84	80.95	40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4	[more]
RS5_BOVIN	8.2e-84	80.95	40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3	[more]

BLAST of ClCG11G001050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSZ1_CUCSA	3.0e-109	98.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G292230 PE=3 SV=1	[more]
A0A0A0K5K0_CUCSA	6.7e-109	98.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G232530 PE=3 SV=1	[more]
A0A0A0LRZ5_CUCSA	8.8e-109	97.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373440 PE=3 SV=1	[more]
A0A0A0LVI4_CUCSA	2.2e-107	97.57	40S ribosomal protein S5 OS=Cucumis sativus GN=Csa_1G168900 PE=4 SV=1	[more]
W9RQK6_9ROSA	5.2e-101	94.03	40S ribosomal protein S5 OS=Morus notabilis GN=L484_012437 PE=3 SV=1	[more]

BLAST of ClCG11G001050 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37270.1	2.5e-99	88.35	ribosomal protein 5B	[more]
AT3G11940.1	2.8e-98	88.35	ribosomal protein 5A	[more]
ATCG01240.1	5.4e-09	34.81	ATCG01240.1 ribosomal protein S7	[more]
ATCG00900.1	5.4e-09	34.81	ATCG00900.1 Ribosomal protein S7p/S5e family protein	[more]

BLAST of ClCG11G001050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092669\|ref\|XP_008447164.1\|	1.2e-111	97.65	PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo]	[more]
gi\|659114009\|ref\|XP_008456864.1\|	2.7e-111	97.65	PREDICTED: 40S ribosomal protein S5-like [Cucumis melo]	[more]
gi\|778725851\|ref\|XP_011659014.1\|	1.8e-110	96.24	PREDICTED: 40S ribosomal protein S5 isoform X1 [Cucumis sativus]	[more]
gi\|659092671\|ref\|XP_008447165.1\|	6.7e-110	99.51	PREDICTED: 40S ribosomal protein S5-like isoform X2 [Cucumis melo]	[more]
gi\|449445316\|ref\|XP_004140419.1\|	4.3e-109	98.54	PREDICTED: 40S ribosomal protein S5 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000235	Ribosomal_S5/S7
IPR005716	Ribosomal_S5/S7_euk/arc
IPR020606	Ribosomal_S7_CS
IPR023798	Ribosomal_S7_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003723	RNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0015935	small ribosomal subunit

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G001050.1	ClCG11G001050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000235	Ribosomal protein S5/S7	PANTHER	PTHR11205	RIBOSOMAL PROTEIN S7	coord: 65..266 score: 1.1E
IPR005716	Ribosomal protein S5/S7, eukaryotic/archaeal	TIGRFAMs	TIGR01028	TIGR01028	coord: 79..266 score: 3.3
IPR020606	Ribosomal protein S7, conserved site	PROSITE	PS00052	RIBOSOMAL_S7	coord: 133..159 scor
IPR023798	Ribosomal protein S7 domain	GENE3D	G3DSA:1.10.455.10		coord: 79..266 score: 2.9
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 122..266 score: 1.7
IPR023798	Ribosomal protein S7 domain	unknown	SSF47973	Ribosomal protein S7	coord: 80..266 score: 7.98
None	No IPR available	PANTHER	PTHR11205:SF24	40S RIBOSOMAL PROTEIN S5-1-RELATED	coord: 65..266 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG11G001050	Csa5G292230	Cucumber (Chinese Long) v2	cuwcgB359
ClCG11G001050	MELO3C020049	Melon (DHL92) v3.5.1	mewcgB045
ClCG11G001050	Cla016897	Watermelon (97103) v1	wcgwmB107
ClCG11G001050	Cla97C11G207420	Watermelon (97103) v2	wcgwmbB065
ClCG11G001050	Bhi07G000142	Wax gourd	wcgwgoB175
ClCG11G001050	CSPI05G12700	Wild cucumber (PI 183967)	cpiwcgB373
ClCG11G001050	Cucsa.373460	Cucumber (Gy14) v1	cgywcgB637
ClCG11G001050	Lsi11G000060	Bottle gourd (USVL1VR-Ls)	lsiwcgB084
ClCG11G001050	CsGy5G009840	Cucumber (Gy14) v2	cgybwcgB329
ClCG11G001050	MELO3C020049.2	Melon (DHL92) v3.6.1	medwcgB048
ClCG11G001050	CsaV3_5G013080	Cucumber (Chinese Long) v3	cucwcgB377

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G001050	Wax gourd	wcgwgoB172
ClCG11G001050	Cucurbita maxima (Rimu)	cmawcgB626
ClCG11G001050	Cucurbita maxima (Rimu)	cmawcgB633
ClCG11G001050	Cucurbita moschata (Rifu)	cmowcgB627
ClCG11G001050	Cucurbita moschata (Rifu)	cmowcgB634
ClCG11G001050	Melon (DHL92) v3.5.1	mewcgB044
ClCG11G001050	Watermelon (97103) v1	wcgwmB110
ClCG11G001050	Cucurbita pepo (Zucchini)	cpewcgB361
ClCG11G001050	Cucurbita pepo (Zucchini)	cpewcgB365
ClCG11G001050	Cucurbita pepo (Zucchini)	cpewcgB369
ClCG11G001050	Melon (DHL92) v3.6.1	medwcgB044
ClCG11G001050	Silver-seed gourd	carwcgB0169
ClCG11G001050	Silver-seed gourd	carwcgB0344
ClCG11G001050	Cucumber (Chinese Long) v3	cucwcgB379