ClCG09G021430 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG09G021430
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr09 : 38408549 .. 38409009 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAAGACCGGAACGTGCCACTAAAAGACTCTACTGAGACAAAGATGGGTTGTCAAGAACGTAAAGGAGGTAGGATGGACAGTTGGTCAGATCTAGTATGGATCGTACATGGATGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCTCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAATCTTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATAGACGGGATCAAGCTTCTAACTGTAAGTTTCAACTTACATAATAATCATATGCCAAAATTATAAAATTGTATAATTCAATAAAAGTAAAGACCTTTACACTAGATGATTACCACAATAACATGAGTTAGATTAACAGATCTCGTAAGAGTTTGTGTTTCTCTCTTTGTTTTTCTAGAACTTGATTCCGTATTCTTGA

mRNA sequence

ATGGAGAAGAAGACCGGAACATCTAGTATGGATCGTACATGGATGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCTCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAATCTTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATAGACGGGATCAAGCTTCTAACTAACTTGATTCCGTATTCTTGA

Coding sequence (CDS)

ATGGAGAAGAAGACCGGAACATCTAGTATGGATCGTACATGGATGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCTCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAATCTTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATAGACGGGATCAAGCTTCTAACTAACTTGATTCCGTATTCTTGA

Protein sequence

MEKKTGTSSMDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSIDGIKLLTNLIPYS

Homology

[Close]

BLAST of ClCG09G021430 vs. TrEMBL
Match: U5CKY2_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s02909p00006680 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-20
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 1


Query: 10 MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID 65
          MDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Sbjct: 1  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMD 55

[Close]

BLAST of ClCG09G021430 vs. TrEMBL
Match: A0A0K9PBW1_ZOSMR (Uncharacterized protein OS=Zostera marina GN=ZOSMA_313G00200 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.0e-14
Identity = 42/55 (76.36%), Postives = 43/55 (78.18%), Query Frame = 1


Query: 10 MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID 65
          MD TWM VGVG S RVPSS I GEEDQVGPCEQ DAL PFN LSEM QKE K +D
Sbjct: 1  MDHTWMTVGVGSSSRVPSSEIPGEEDQVGPCEQFDALPPFNPLSEMWQKERKFMD 55

[Close]

BLAST of ClCG09G021430 vs. TrEMBL
Match: A0A067JR25_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17569 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.5e-13
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 1


Query: 10 MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEM-RQKEGKSIDGI 67
          MDRTW +VGVGGS RVPSSGI GEEDQVGPCEQLDALSPFN L++  ++KE    D I
Sbjct: 1  MDRTWTIVGVGGSPRVPSSGIPGEEDQVGPCEQLDALSPFNPLAKCGKRKENPWTDPI 58

[Close]

BLAST of ClCG09G021430 vs. TrEMBL
Match: U5D9L3_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00061p00179620 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-13
Identity = 41/54 (75.93%), Postives = 44/54 (81.48%), Query Frame = 1


Query: 10 MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSI 64
          MDRTW +VGV GS RV S+GI GEEDQVGPCEQLDALSPF  L EM QKE KS+
Sbjct: 1  MDRTWTIVGVDGSHRVTSAGIPGEEDQVGPCEQLDALSPFTPLIEMWQKEEKSM 54

[Close]

BLAST of ClCG09G021430 vs. TrEMBL
Match: A0A151UE16_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_050059 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.4e-13
Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 1


Query: 16 VVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID 65
          VVGVGGS RV SSGI GEEDQVGPCEQLDALSPFN LSEMR+KE +S+D
Sbjct: 1  VVGVGGSPRVSSSGIPGEEDQVGPCEQLDALSPFNPLSEMRKKEKESMD 49

[Close]

BLAST of ClCG09G021430 vs. NCBI nr
Match: gi|548835773|gb|ERM97427.1| (hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda])

HSP 1 Score: 105.9 bits (263), Expect = 3.1e-20
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 1


Query: 10 MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID 65
          MDRTW VVGVGGSLRVPSSGI GEEDQVGPCEQLDALSPFN LSEMRQKEGKS+D
Sbjct: 1  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMD 55

[Close]

BLAST of ClCG09G021430 vs. NCBI nr
Match: gi|901808862|gb|KMZ65670.1| (hypothetical protein ZOSMA_313G00200 [Zostera marina])

HSP 1 Score: 85.1 bits (209), Expect = 5.7e-14
Identity = 42/55 (76.36%), Postives = 43/55 (78.18%), Query Frame = 1


Query: 10 MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID 65
          MD TWM VGVG S RVPSS I GEEDQVGPCEQ DAL PFN LSEM QKE K +D
Sbjct: 1  MDHTWMTVGVGSSSRVPSSEIPGEEDQVGPCEQFDALPPFNPLSEMWQKERKFMD 55

[Close]

BLAST of ClCG09G021430 vs. NCBI nr
Match: gi|643713746|gb|KDP26411.1| (hypothetical protein JCGZ_17569 [Jatropha curcas])

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-13
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 1


Query: 10 MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEM-RQKEGKSIDGI 67
          MDRTW +VGVGGS RVPSSGI GEEDQVGPCEQLDALSPFN L++  ++KE    D I
Sbjct: 1  MDRTWTIVGVGGSPRVPSSGIPGEEDQVGPCEQLDALSPFNPLAKCGKRKENPWTDPI 58

[Close]

BLAST of ClCG09G021430 vs. NCBI nr
Match: gi|548861813|gb|ERN19184.1| (hypothetical protein AMTR_s00061p00179620 [Amborella trichopoda])

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-13
Identity = 41/54 (75.93%), Postives = 44/54 (81.48%), Query Frame = 1


Query: 10 MDRTWMVVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSI 64
          MDRTW +VGV GS RV S+GI GEEDQVGPCEQLDALSPF  L EM QKE KS+
Sbjct: 1  MDRTWTIVGVDGSHRVTSAGIPGEEDQVGPCEQLDALSPFTPLIEMWQKEEKSM 54

[Close]

BLAST of ClCG09G021430 vs. NCBI nr
Match: gi|1012366342|gb|KYP77523.1| (hypothetical protein KK1_050059, partial [Cajanus cajan])

HSP 1 Score: 82.0 bits (201), Expect = 4.8e-13
Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 1


Query: 16 VVGVGGSLRVPSSGISGEEDQVGPCEQLDALSPFNLLSEMRQKEGKSID 65
          VVGVGGS RV SSGI GEEDQVGPCEQLDALSPFN LSEMR+KE +S+D
Sbjct: 1  VVGVGGSPRVSSSGIPGEEDQVGPCEQLDALSPFNPLSEMRKKEKESMD 49

The following BLAST results are available for this feature:

BLAST of ClCG09G021430 vs. TrEMBL


Match Name	E-value	Identity	Description
U5CKY2_AMBTC	2.2e-20	92.73	Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s02909p00006680 PE=4 SV=...	[more]
A0A0K9PBW1_ZOSMR	4.0e-14	76.36	Uncharacterized protein OS=Zostera marina GN=ZOSMA_313G00200 PE=4 SV=1	[more]
A0A067JR25_JATCU	1.5e-13	72.41	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17569 PE=4 SV=1	[more]
U5D9L3_AMBTC	2.0e-13	75.93	Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00061p00179620 PE=4 SV=...	[more]
A0A151UE16_CAJCA	3.4e-13	83.67	Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_050059 PE=4 SV=1	[more]

BLAST of ClCG09G021430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|548835773\|gb\|ERM97427.1\|	3.1e-20	92.73	hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]	[more]
gi\|901808862\|gb\|KMZ65670.1\|	5.7e-14	76.36	hypothetical protein ZOSMA_313G00200 [Zostera marina]	[more]
gi\|643713746\|gb\|KDP26411.1\|	2.2e-13	72.41	hypothetical protein JCGZ_17569 [Jatropha curcas]	[more]
gi\|548861813\|gb\|ERN19184.1\|	2.8e-13	75.93	hypothetical protein AMTR_s00061p00179620 [Amborella trichopoda]	[more]
gi\|1012366342\|gb\|KYP77523.1\|	4.8e-13	83.67	hypothetical protein KK1_050059, partial [Cajanus cajan]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G021430.1	ClCG09G021430.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG09G021430	Cla003321	Watermelon (97103) v1	wcgwmB008

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG09G021430	Cucurbita pepo (Zucchini)	cpewcgB478
ClCG09G021430	Cucurbita pepo (Zucchini)	cpewcgB689
ClCG09G021430	Bottle gourd (USVL1VR-Ls)	lsiwcgB161
ClCG09G021430	Cucumber (Gy14) v2	cgybwcgB480
ClCG09G021430	Melon (DHL92) v3.6.1	medwcgB172
ClCG09G021430	Silver-seed gourd	carwcgB0423
ClCG09G021430	Silver-seed gourd	carwcgB0859
ClCG09G021430	Cucumber (Chinese Long) v3	cucwcgB542
ClCG09G021430	Watermelon (97103) v2	wcgwmbB035
ClCG09G021430	Wax gourd	wcgwgoB063
ClCG09G021430	Cucurbita maxima (Rimu)	cmawcgB007
ClCG09G021430	Cucurbita maxima (Rimu)	cmawcgB380
ClCG09G021430	Cucurbita moschata (Rifu)	cmowcgB001
ClCG09G021430	Cucurbita moschata (Rifu)	cmowcgB378
ClCG09G021430	Wild cucumber (PI 183967)	cpiwcgB548
ClCG09G021430	Cucumber (Chinese Long) v2	cuwcgB519
ClCG09G021430	Melon (DHL92) v3.5.1	mewcgB163