ClCG09G013110 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG09G013110
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	(RAP Annotation release2) NERD domain containing protein
Location	CG_Chr09 : 17760820 .. 17766562 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGCGGAGATTCTCTGTGGCTTCTTAGCATTTAGAGTGCTCAGGCGATTCTTTTTTCCAAGAGACGAAATGGAGATCGAGACCATTGATTCTAATGCCCTATTCGCCGCTGCTTCTAGGTAATTTCATTCCAGCTTCGAATACTTATCAAAGCATTTCGATTATGGGAAGAAACAAGGTTTGTAATCTAATGCTAAATTTTGTGTTCTTTCTTCTTTTGATAGACTGGAGAAGCTTTATGGTGGAAAGGCTTTTATGGGACTTCGAATTCCAGACGCTGACACTGGTTTGCGACAGAGTATTGATATGGTGCTTGTAACCAAAGGGTAGATTTCCCACATTTCAAATTAATTATCAAGTGCACGAGTTAAAGTAGGAAGCGAATGAACTTAATCGAGAATTTTGGAATTTGACAACTGCTTAGTATTAGCCTCGTACCCTGCAGAGAGTGAGAGTTCATATCTCTATACACTACAATGCTATTTCAGCTATAAGAAAAATGCATGTAGAGAGAATTTTTAACAGACTTCACTTGTGGTCGGTTATGATTGCTCAATCATTTGGAATAGAACCTTTTGGAATAATGTCACTCCTGAGGTGTAAAGTAATTAACCAAAATATCAATACGAAGCTATAAGTTTCATTAACATCTCCCTTCAAACAAGTGGGTAGAGAGATTAGACCAAGTCTGATTCACAAGTAAGAAAAGCGTGTAAGAGATAAATACTTGGTGAGAGTGAGACGGTTAGCAAGTTGATTAGAAAAGGGCACATAATCAATATCTAACAAATCATTGAGGCCTTGATCATGAACGTAGTTCATCAATTTCAATATGCTTTTATTTTAACCTTCTAATTGTTTGGTGTATTAAAAAAGAATTTTCACTCTTCACATAGTCAAGAAAGGCTTCCAAATCGATCTTTCCATTAAAAGAGGGTAAGTTGATCTTCATTTGAAATTCTGTAGATATATTCTCACGTTCTTGGTATGGTTTTCTCTTTCCCATCTCTGTTCATCTAGGTATCTACAGGTTACATCCCACTTATCTTTTAAAACATCAGAATCTTGCTTCTTTCTCATTATTTACTTCAATTTCCTCTATTCTTTGTAATTTCCCGTACATAAGTTATTATGGAATCTAGGCCTCTTCTTCGCCAAAAGCCTTAACGATTACCTAGACCCTTTGCTGAGACTATAACTATTCTTCTACCATTCCCACTCTTTCAGAATGAAAAAGCCTTCCTATCCACTCAAACCTTCCCCATACTAAGCTTACATCGTACAGAGAGGGAGAGAGAAGCTTACATACAATCTGCTGTAACTTGCTAATGGAGAAAAAGCTGTTGGCCACTCAATGAGCAATGATGTTCAATAGAAGGTGCCAATCCATAAAGTTCATGTTGATAGCCTCCCCCCACCCCCACAAAAGAACCGTGATTGCTACCATTGCACTTGTCACATTTGGTATTCTTCTTTGCATCTGTTCATTTCTCTGAAAATACTGAGAATAATATATGAAATGTCAAGTCTCATTGAAACATGTGATGTTTGTTAATTCTGGCATTTTCTTTTTTCCATTATCTCTTATGCTTTCAATTATTTAAATCCATACAGGGAAGCAGTGGTGATATGTGTCAAAAATCTTTCAGGTTTTGTTTCCATGAGTGCTGATGGAAGCTGGATCTGTGAAGGTGATGGTAGACAAAACTCAGAGATTATGCCTGATCCGGTAAGTTCTTTTCATTTCAAAATTGTTACGAGCTTTCTCTAATATGATGCACACAATCAGAAGTATTCTAAAGCTAATTTACTTCATTGATCTGTTACTAACTTGTGCGACTGTTTTCTTTTTGACTTGCTTCCATATGGAGCACTTGATATTAACTGAACATTTTGATTAAGTCAGTTAGACATGGGTTATTCACTTGCACATTGCTTGTTGTTATCAATTGAGTTAGTTCTTATTAACAAAATTTGCTTGTAAGTGAGTTTGAAAAGTTTCATGAAGCATGTCAGTGGTGATTGGATGAAATGGTATTTATCAAATAAGACTTACTTTGCATAGTGCAATCCCTTAATACCCCTCATTGATATGAAATAGATCTTTCAAGTGCCTTTCTCAATATCAATTGTATAGATTGAGGATTCACTACAGAAAATTAGCCATGTGACCACAGGTATTTGTTGGTAGGGCGTAGTTTACTGGTAGAAGATCCTTATCCATGAATTCACTACGGAAGTTAAGATGTTTAAAATCCTCTGGATCACTACCCCTTTGCGAGTTATTCCCTCACTTTTACCATTTGTCTGATAAGGGCTGCATTCAGTGGCTTCTGTCCTAGAGTCTTCCCCGTTGCTTTCTTTGGAGTAAGAGTCCCTTGGCGTCTTAATTTTAATTGAATAATACTTGTATTTCGTTAATACCCATATCAATATGCAATATAGCTCTTATAGAGGAGAGAGACCCATTATGAATAAGGAAAGAGAACAACAATAAAGAAAGGAAAATATTAACAATGAATATAACAACAATAAAGAAAGGAAAATATTAACAATGAATATTTACACCCAAATATGCCTAAATAATAGAAATTTCAACAAATACGACCATAAGATACATAACCTTCTTATATAGAAAGACATTCAATAGATAACGAAAGAATGAGAATAAGAATGATATAAAATCATTGATACATGATTTCAACTAATTAGCATATTTACAATCAAGAACCAACAATCCCCTCAAATTGATTTAATTATATCTTCTATTGCCAGCTTGTCAATCACCCTTGATTCAATTTTCATCTTTGTAAAACTGCAATAGGCTCCTATTATGTAGAATTGGATTATGGGCTGTAGTTATCACTGTACACCCTTAAGATCAGGACTTGACATTGAAGAAGTAGCAAGCTTAGGGCAAATAACATTTGGGGAAAGGCAGAAACATCTCCAAAAATTATCACTCTCTAAATTTAGCTTCTCCCTTGAGGAAAATTTTGGGTAAAAAAAGGTTGGTCTCCAAAAACAACACATTCGTACTCACATAAAATTCTTTGCTTTTTTGGTTTGTGGATCAGAACATTTATATCCTTTTTGCTAGAAGCATAGCTTAAGAAAATACATTTAATGGCTTGGTGATCTAATTTTCCAAATTTGACTTTTCTGTTTTCCTTCCAAATTGAATGAGATTTTTTCATACTTCTTTTGATGCAAAAGCTTACTACAGAAAAAAATTAGGAATATGCATAGCTAGTACACCAAAAAACTTTGATAGGTAACTTAGAGCAAAAATGAGTTATCAGAAAAAATATCTTTTAAAACATTAAGTGGAGTTCTAAAATTCAAAACTTTAGAAGGCATTTAATTTATTAGATAGATGCATAGACACGGATACAGTAGGATATGACGATACATCAATTTCTAAAAAACTAGGATACAAACCATCATGGGTTGGCTTAGTGGTAAAAAGGAGACATAGTCTCAATAAATGACTAAGAAGTCAAGAGTTCAATTCATGGTGGCCACCTACCTAGGAATTAATTTCCTATGAGTTTCCTTGACACCCAAATATTGTAGGGTCAGGCGGTCGTCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCGGACACTCACGGATATATAAAAAAAAAAACTAGGATACATATCCGTTGAGGATATATTTTTTTCTTAATTTTTCATAGGATATCTGCAAATTTAACATAGGGGAAATACAAAGATAAATGAAGAACTTCATTGGATTGTTGAATATATTCAAGTTGGTTTTTAGATGAGTGGTTTTTCTTTTTTCTTTAAGAAAAAGGTTAGAGCGTGTTCCCTTCATGTGTCTTGAAGGGGACATGCGTATTCAAATTTCTTTTTTTTTTTAAAAAAAAAAAACACCAAATCGCGTATTTGATATGTATCTACGAATATTAGTATTTGATATGTTTCCGATTCTTTGCCTCACATGAAGAATCTGTGATGCATAGGTGAGTACTGTTTCCCCCATGAGTACTTCAGAATGTTCATTGAAAACATTATGGCCCTAGCAACATTTAGCAAATATCGTTCAACAATACCATTTTGTTGAGGGTTATCTCAACAAGTAGATTGGTGAACACTGAACAATGCCTTTATTTCTAAAACCTCACTCTAATGTACATTGAAATATTTAGTGTCATAATTAGAATGCTAGATCCCTATTATTTTGTTTGACATTGGGTTTTGGTCCTATTGTAGAAACATGTAAAAACATTCTTTTTTGGTAGTAAAATAAACGTAAGGTAAAATAAACATAAGGTAAATGAGTGTGATCATTTTTGAAAGTCATCAACCACTTCACCATCACTTAGCACTTTAGAAGGACCCAAAACATCATTATGAATCAAATAAAATGGTTTGAAGGTGAGTAAGGTTTTGGTGAAAAAATAGAGCGATGATTGTTTTGCAAAGATGCAATTTTCACAATGAAAATGAGAACAATCAACTCCCTTATAAAGACCGAAAATAAATATTTGAGATAGAAAAGACTAGGATGTCCCAGTCTAAAATGCTAAAACATAATTTGATCTTATACTATTGTAGACTTGAGTTATTTTATTATGACTAGATGGTTCATTGAAATAGTAGAGGCCGCTAAGTTAAATGCTTCATCGTGGTGCTTTCAATCCAAGAAATTTGAAGATTTCTCCATTCAAGATATTAGCATCAATTGGAAAGCCTTTATTTTTCCCAATGTTTAGAGACTTGTTATTAGAATCAAAATGTTCTGTTGCTGAAATTGTTGGATTTAATTGTTCTTGTTTTAGATTGTGCTACTCACTTGTATAGGACATGATGAGAGTGCTAAGGGGGTGTCAACCTAGTTGAGATATCCGGGTGCACTCACTGATCCTTTGGCCTCTGTTTCTGTTTCCATTACCATATTGTATGTCTCATTTCATAATCTTAATGAAGAGGCTTGTTTTTTTTTCAAAAAAAAGTAGAGGTTGCCAAGCATCCTAGCACGTCCAAACATCTTCTCGTGATCTGGTCTTGAAAAATTCAATGAGAAAACAACACGGCAGTTAAAATCTTTAGAAAACTTACAAATAAATAAGAGAATATATGCTAATTTTGGAACATGGAGAACAAAGTTCTGAGTGATTTTATGAAGTCAGTTTAATGGTTCCTTTTATTTTGATTGATGAAACATTGCCATCTAAAATTCTAATCTTTTCATTGCAATACGAAGGAGAGTATAAGTGAAAGAAATAAGACGAACTAGTCATATGATTAGAAGCTCCAAAATCGATAATCCACTGAGACGAATTGTGACAAGAGAAGACTTGAGAATGATTACCTGTAGGTTTGATTTAACAGCCAACAATGACAAAACATGCCTTAGGAAGTGTTAGTCTTGTGAACTTTGAATCTCATGATCCCTCTGAAATTGTGACAAATCACAAACTTCAAGGTCACAGTTTTCTCCAATGGAGTCAATCGGTTGATGTATACCATATGGATCTCTAACAGAGTTTCCAAAAAGAAAGAAAAAAGAATAGGAAAAAAAAAAAGAAAAATAGAAAAAAGAATGTGAGATATAGTGATGATTTTTATATCATGTGTTTAATTTTATATACAGGTAGCTGAGACACGAAGATGGGTTTCAATTCTTGAATCATACTTTGAGCAGAGAGGAGTTACGCTACCAGAAGGATATTTATCATGGAAAGTTCTGGTTCCCAACCCAAAATTC

mRNA sequence

ATGTGGGCGGAGATTCTCTGTGGCTTCTTAGCATTTAGAGTGCTCAGGCGATTCTTTTTTCCAAGAGACGAAATGGAGATCGAGACCATTGATTCTAATGCCCTATTCGCCGCTGCTTCTAGACTGGAGAAGCTTTATGGTGGAAAGGCTTTTATGGGACTTCGAATTCCAGACGCTGACACTGGTTTGCGACAGAGTATTGATATGGTGCTTGTAACCAAAGGGGAAGCAGTGGTGATATGTGTCAAAAATCTTTCAGGTTTTGTTTCCATGAGTGCTGATGGAAGCTGGATCTGTGAAGGTGATGGTAGACAAAACTCAGAGATTATGCCTGATCCGGTAGCTGAGACACGAAGATGGGTTTCAATTCTTGAATCATACTTTGAGCAGAGAGGAGTTACGCTACCAGAAGGATATTTATCATGGAAAGTTCTGGTTCCCAACCCAAAATTC

Coding sequence (CDS)

ATGTGGGCGGAGATTCTCTGTGGCTTCTTAGCATTTAGAGTGCTCAGGCGATTCTTTTTTCCAAGAGACGAAATGGAGATCGAGACCATTGATTCTAATGCCCTATTCGCCGCTGCTTCTAGACTGGAGAAGCTTTATGGTGGAAAGGCTTTTATGGGACTTCGAATTCCAGACGCTGACACTGGTTTGCGACAGAGTATTGATATGGTGCTTGTAACCAAAGGGGAAGCAGTGGTGATATGTGTCAAAAATCTTTCAGGTTTTGTTTCCATGAGTGCTGATGGAAGCTGGATCTGTGAAGGTGATGGTAGACAAAACTCAGAGATTATGCCTGATCCGGTAGCTGAGACACGAAGATGGGTTTCAATTCTTGAATCATACTTTGAGCAGAGAGGAGTTACGCTACCAGAAGGATATTTATCATGGAAAGTTCTGGTTCCCAACCCAAAATTC

Protein sequence

MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDADTGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRWVSILESYFEQRGVTLPEGYLSWKVLVPNPKF

Homology

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BLAST of ClCG09G013110 vs. TrEMBL
Match: A0A0A0LKG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G915150 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.7e-77
Identity = 144/151 (95.36%), Postives = 148/151 (98.01%), Query Frame = 1


Query: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDAD 60
           MWAEILCGFLAFRVLRRFFFPRDEMEIETIDS+ALFA ASRLEKLYGGKAF+GLRIPDAD
Sbjct: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSSALFAVASRLEKLYGGKAFVGLRIPDAD 60

Query: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRW 120
           TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQ SEI+PDPVAETRRW
Sbjct: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQKSEILPDPVAETRRW 120

Query: 121 VSILESYFEQRGVTLPEGYLSWKVLVPNPKF 152
           VSILESYFEQRGV LPEGYLSWKVL+PNPKF
Sbjct: 121 VSILESYFEQRGVALPEGYLSWKVLLPNPKF 151

[Close]

BLAST of ClCG09G013110 vs. TrEMBL
Match: A0A061EZD8_THECC (Plasma membrane isoform 4 OS=Theobroma cacao GN=TCM_025518 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.5e-54
Identity = 101/151 (66.89%), Postives = 123/151 (81.46%), Query Frame = 1


Query: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDAD 60
           MW EI+CG + +R+ RRFF+  D +E+ET DSNA+F+ A+RLEKLYGGK ++GL IPDAD
Sbjct: 1   MWVEIICGLIVYRLFRRFFYDDDVLEVETSDSNAIFSVANRLEKLYGGKVYVGLHIPDAD 60

Query: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRW 120
           TG RQ+IDMVLVTKGEA VI VKNL+GFVS+S DGSW CEG G   +E  PDPVAE ++ 
Sbjct: 61  TGSRQNIDMVLVTKGEAAVISVKNLAGFVSISEDGSWACEGVGSHRAERHPDPVAEAKKQ 120

Query: 121 VSILESYFEQRGVTLPEGYLSWKVLVPNPKF 152
            S+LESY EQRGV LPEGY S+KV++PNPKF
Sbjct: 121 ASVLESYLEQRGVALPEGYFSYKVVIPNPKF 151

[Close]

BLAST of ClCG09G013110 vs. TrEMBL
Match: A0A061EYI0_THECC (Plasma membrane isoform 1 OS=Theobroma cacao GN=TCM_025518 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.5e-54
Identity = 101/151 (66.89%), Postives = 123/151 (81.46%), Query Frame = 1


Query: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDAD 60
           MW EI+CG + +R+ RRFF+  D +E+ET DSNA+F+ A+RLEKLYGGK ++GL IPDAD
Sbjct: 1   MWVEIICGLIVYRLFRRFFYDDDVLEVETSDSNAIFSVANRLEKLYGGKVYVGLHIPDAD 60

Query: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRW 120
           TG RQ+IDMVLVTKGEA VI VKNL+GFVS+S DGSW CEG G   +E  PDPVAE ++ 
Sbjct: 61  TGSRQNIDMVLVTKGEAAVISVKNLAGFVSISEDGSWACEGVGSHRAERHPDPVAEAKKQ 120

Query: 121 VSILESYFEQRGVTLPEGYLSWKVLVPNPKF 152
            S+LESY EQRGV LPEGY S+KV++PNPKF
Sbjct: 121 ASVLESYLEQRGVALPEGYFSYKVVIPNPKF 151

[Close]

BLAST of ClCG09G013110 vs. TrEMBL
Match: A0A061F6L3_THECC (Plasma membrane isoform 2 OS=Theobroma cacao GN=TCM_025518 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.5e-54
Identity = 101/151 (66.89%), Postives = 123/151 (81.46%), Query Frame = 1


Query: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDAD 60
           MW EI+CG + +R+ RRFF+  D +E+ET DSNA+F+ A+RLEKLYGGK ++GL IPDAD
Sbjct: 1   MWVEIICGLIVYRLFRRFFYDDDVLEVETSDSNAIFSVANRLEKLYGGKVYVGLHIPDAD 60

Query: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRW 120
           TG RQ+IDMVLVTKGEA VI VKNL+GFVS+S DGSW CEG G   +E  PDPVAE ++ 
Sbjct: 61  TGSRQNIDMVLVTKGEAAVISVKNLAGFVSISEDGSWACEGVGSHRAERHPDPVAEAKKQ 120

Query: 121 VSILESYFEQRGVTLPEGYLSWKVLVPNPKF 152
            S+LESY EQRGV LPEGY S+KV++PNPKF
Sbjct: 121 ASVLESYLEQRGVALPEGYFSYKVVIPNPKF 151

[Close]

BLAST of ClCG09G013110 vs. TrEMBL
Match: A0A067E062_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024593mg PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-52
Identity = 97/151 (64.24%), Postives = 125/151 (82.78%), Query Frame = 1


Query: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDAD 60
           MW +ILCG + +++ ++ F+  D +++ET DSNA+F+ A+RLEKLY GKA++GLRIPD D
Sbjct: 1   MWVQILCGLVIYKICKKLFYDDDVLDVETSDSNAIFSVAARLEKLYKGKAYVGLRIPDPD 60

Query: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRW 120
           TG RQ+ID+VL+TKGEAVVI VKNLSGFV+++ADGSW+CE  GR  S   PDPVAE ++ 
Sbjct: 61  TGSRQNIDIVLITKGEAVVISVKNLSGFVTVNADGSWVCEAVGRHRSAAHPDPVAEAKKQ 120

Query: 121 VSILESYFEQRGVTLPEGYLSWKVLVPNPKF 152
            SILESY EQRGV LPEGYLS+KV++PNPKF
Sbjct: 121 ASILESYLEQRGVALPEGYLSYKVIIPNPKF 151

[Close]

BLAST of ClCG09G013110 vs. TAIR10
Match: AT1G65020.1 (AT1G65020.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 197.6 bits (501), Expect = 5.5e-51
Identity = 91/151 (60.26%), Postives = 117/151 (77.48%), Query Frame = 1


Query: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDAD 60
           MW EI+CG + ++++RRFF+  +  ++ET DS ALF+ A RLEKLYGGKA++GLRIPDAD
Sbjct: 1   MWIEIICGLVIYKLVRRFFYDDEFSDVETSDSTALFSVAHRLEKLYGGKAYVGLRIPDAD 60

Query: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRW 120
           T  RQ ID+VLVTKG+ VVI VKNLSG V++++DGSW+CEG     +E  PDP+AE ++ 
Sbjct: 61  TASRQDIDVVLVTKGDVVVISVKNLSGIVTVTSDGSWVCEGGKHHTTETFPDPLAEVKKQ 120

Query: 121 VSILESYFEQRGVTLPEGYLSWKVLVPNPKF 152
            S+LESY EQRGVTL EG +S KV++PNP F
Sbjct: 121 ASVLESYLEQRGVTLLEGNVSCKVVIPNPSF 151

[Close]

BLAST of ClCG09G013110 vs. NCBI nr
Match: gi|449461233|ref|XP_004148346.1| (PREDICTED: uncharacterized protein LOC101206635 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 2.5e-77
Identity = 144/151 (95.36%), Postives = 148/151 (98.01%), Query Frame = 1


Query: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDAD 60
           MWAEILCGFLAFRVLRRFFFPRDEMEIETIDS+ALFA ASRLEKLYGGKAF+GLRIPDAD
Sbjct: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSSALFAVASRLEKLYGGKAFVGLRIPDAD 60

Query: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRW 120
           TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQ SEI+PDPVAETRRW
Sbjct: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQKSEILPDPVAETRRW 120

Query: 121 VSILESYFEQRGVTLPEGYLSWKVLVPNPKF 152
           VSILESYFEQRGV LPEGYLSWKVL+PNPKF
Sbjct: 121 VSILESYFEQRGVALPEGYLSWKVLLPNPKF 151

[Close]

BLAST of ClCG09G013110 vs. NCBI nr
Match: gi|590639340|ref|XP_007029642.1| (Plasma membrane isoform 2 [Theobroma cacao])

HSP 1 Score: 219.2 bits (557), Expect = 5.0e-54
Identity = 101/151 (66.89%), Postives = 123/151 (81.46%), Query Frame = 1


Query: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDAD 60
           MW EI+CG + +R+ RRFF+  D +E+ET DSNA+F+ A+RLEKLYGGK ++GL IPDAD
Sbjct: 1   MWVEIICGLIVYRLFRRFFYDDDVLEVETSDSNAIFSVANRLEKLYGGKVYVGLHIPDAD 60

Query: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRW 120
           TG RQ+IDMVLVTKGEA VI VKNL+GFVS+S DGSW CEG G   +E  PDPVAE ++ 
Sbjct: 61  TGSRQNIDMVLVTKGEAAVISVKNLAGFVSISEDGSWACEGVGSHRAERHPDPVAEAKKQ 120

Query: 121 VSILESYFEQRGVTLPEGYLSWKVLVPNPKF 152
            S+LESY EQRGV LPEGY S+KV++PNPKF
Sbjct: 121 ASVLESYLEQRGVALPEGYFSYKVVIPNPKF 151

[Close]

BLAST of ClCG09G013110 vs. NCBI nr
Match: gi|590639336|ref|XP_007029641.1| (Plasma membrane isoform 1 [Theobroma cacao])

HSP 1 Score: 219.2 bits (557), Expect = 5.0e-54
Identity = 101/151 (66.89%), Postives = 123/151 (81.46%), Query Frame = 1


Query: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDAD 60
           MW EI+CG + +R+ RRFF+  D +E+ET DSNA+F+ A+RLEKLYGGK ++GL IPDAD
Sbjct: 1   MWVEIICGLIVYRLFRRFFYDDDVLEVETSDSNAIFSVANRLEKLYGGKVYVGLHIPDAD 60

Query: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRW 120
           TG RQ+IDMVLVTKGEA VI VKNL+GFVS+S DGSW CEG G   +E  PDPVAE ++ 
Sbjct: 61  TGSRQNIDMVLVTKGEAAVISVKNLAGFVSISEDGSWACEGVGSHRAERHPDPVAEAKKQ 120

Query: 121 VSILESYFEQRGVTLPEGYLSWKVLVPNPKF 152
            S+LESY EQRGV LPEGY S+KV++PNPKF
Sbjct: 121 ASVLESYLEQRGVALPEGYFSYKVVIPNPKF 151

[Close]

BLAST of ClCG09G013110 vs. NCBI nr
Match: gi|590639347|ref|XP_007029644.1| (Plasma membrane isoform 4 [Theobroma cacao])

HSP 1 Score: 219.2 bits (557), Expect = 5.0e-54
Identity = 101/151 (66.89%), Postives = 123/151 (81.46%), Query Frame = 1


Query: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDAD 60
           MW EI+CG + +R+ RRFF+  D +E+ET DSNA+F+ A+RLEKLYGGK ++GL IPDAD
Sbjct: 1   MWVEIICGLIVYRLFRRFFYDDDVLEVETSDSNAIFSVANRLEKLYGGKVYVGLHIPDAD 60

Query: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRW 120
           TG RQ+IDMVLVTKGEA VI VKNL+GFVS+S DGSW CEG G   +E  PDPVAE ++ 
Sbjct: 61  TGSRQNIDMVLVTKGEAAVISVKNLAGFVSISEDGSWACEGVGSHRAERHPDPVAEAKKQ 120

Query: 121 VSILESYFEQRGVTLPEGYLSWKVLVPNPKF 152
            S+LESY EQRGV LPEGY S+KV++PNPKF
Sbjct: 121 ASVLESYLEQRGVALPEGYFSYKVVIPNPKF 151

[Close]

BLAST of ClCG09G013110 vs. NCBI nr
Match: gi|720076967|ref|XP_010240884.1| (PREDICTED: uncharacterized protein LOC104585635 [Nelumbo nucifera])

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52
Identity = 102/149 (68.46%), Postives = 121/149 (81.21%), Query Frame = 1


Query: 1   MWAEILCGFLAFRVLRRFFFPRDEMEIETIDSNALFAAASRLEKLYGGKAFMGLRIPDAD 60
           MW EILCG + FR+LRRFF+  D +EIET DS++ F  ASR+EKLYGGK ++GLRIPDAD
Sbjct: 1   MWFEILCGLVVFRLLRRFFYDDDILEIETTDSDSKFLVASRIEKLYGGKVYLGLRIPDAD 60

Query: 61  TGLRQSIDMVLVTKGEAVVICVKNLSGFVSMSADGSWICEGDGRQNSEIMPDPVAETRRW 120
           TG RQ+IDMVLVTKGEAVVI VKN SGFV + ADGSW+C    +  +E  PDPV ET+R 
Sbjct: 61  TGSRQNIDMVLVTKGEAVVIAVKNFSGFVGIDADGSWVCTSKSKYKTERHPDPVVETKRQ 120

Query: 121 VSILESYFEQRGVTLPEGYLSWKVLVPNP 150
           V++LESY EQRGVTLPEGYLS KV++PNP
Sbjct: 121 VAVLESYLEQRGVTLPEGYLSGKVVLPNP 149

The following BLAST results are available for this feature:

BLAST of ClCG09G013110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKG9_CUCSA	1.7e-77	95.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G915150 PE=4 SV=1	[more]
A0A061EZD8_THECC	3.5e-54	66.89	Plasma membrane isoform 4 OS=Theobroma cacao GN=TCM_025518 PE=4 SV=1	[more]
A0A061EYI0_THECC	3.5e-54	66.89	Plasma membrane isoform 1 OS=Theobroma cacao GN=TCM_025518 PE=4 SV=1	[more]
A0A061F6L3_THECC	3.5e-54	66.89	Plasma membrane isoform 2 OS=Theobroma cacao GN=TCM_025518 PE=4 SV=1	[more]
A0A067E062_CITSI	1.5e-52	64.24	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024593mg PE=4 SV=1	[more]

BLAST of ClCG09G013110 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65020.1	5.5e-51	60.26	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of ClCG09G013110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461233\|ref\|XP_004148346.1\|	2.5e-77	95.36	PREDICTED: uncharacterized protein LOC101206635 [Cucumis sativus]	[more]
gi\|590639340\|ref\|XP_007029642.1\|	5.0e-54	66.89	Plasma membrane isoform 2 [Theobroma cacao]	[more]
gi\|590639336\|ref\|XP_007029641.1\|	5.0e-54	66.89	Plasma membrane isoform 1 [Theobroma cacao]	[more]
gi\|590639347\|ref\|XP_007029644.1\|	5.0e-54	66.89	Plasma membrane isoform 4 [Theobroma cacao]	[more]
gi\|720076967\|ref\|XP_010240884.1\|	1.2e-52	68.46	PREDICTED: uncharacterized protein LOC104585635 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011528	NERD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0044464	cell part
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G013110.1	ClCG09G013110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011528	Nuclease-related domain, NERD	PFAM	PF08378	NERD	coord: 37..128 score: 3.
IPR011528	Nuclease-related domain, NERD	PROFILE	PS50965	NERD	coord: 30..147 score: 17
None	No IPR available	PANTHER	PTHR35287	FAMILY NOT NAMED	coord: 2..151 score: 3.6
None	No IPR available	PANTHER	PTHR35287:SF1	SUBFAMILY NOT NAMED	coord: 2..151 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG09G013110	Csa3G915150	Cucumber (Chinese Long) v2	cuwcgB175
ClCG09G013110	Cla001381	Watermelon (97103) v1	wcgwmB007
ClCG09G013110	Cla97C09G175850	Watermelon (97103) v2	wcgwmbB035
ClCG09G013110	Bhi05G000467	Wax gourd	wcgwgoB034
ClCG09G013110	CSPI03G47690	Wild cucumber (PI 183967)	cpiwcgB178
ClCG09G013110	Cucsa.314010	Cucumber (Gy14) v1	cgywcgB534
ClCG09G013110	CmaCh02G010590	Cucurbita maxima (Rimu)	cmawcgB511
ClCG09G013110	CmoCh02G010760	Cucurbita moschata (Rifu)	cmowcgB508
ClCG09G013110	Lsi05G008940	Bottle gourd (USVL1VR-Ls)	lsiwcgB316
ClCG09G013110	Cp4.1LG05g06490	Cucurbita pepo (Zucchini)	cpewcgB627
ClCG09G013110	CsGy3G045020	Cucumber (Gy14) v2	cgybwcgB162
ClCG09G013110	Carg08419	Silver-seed gourd	carwcgB0685
ClCG09G013110	CsaV3_3G050090	Cucumber (Chinese Long) v3	cucwcgB182

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG09G013110	Melon (DHL92) v3.6.1	medwcgB305
ClCG09G013110	Melon (DHL92) v3.5.1	mewcgB310