ClCG08G014060 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAAATTGCCGCCCATCTTTCAAATTCAGAGCTTCAACTCGCTTGGTGAAATCGAATTCAATTGTTTGAAGATCGCAAAGGAAACCCTAGAAATTCACTTCTCGTTGGTCCAAGCAACTGTTCTTCAGGTTCCCCCAATCATGGAGCCTGTTGCCTTTGTTGTCGACAAATTGAAAGGTTTCGGCACCGCAACCCAGAATTTCTTTGATGGCTTAGTTCATCGCCGCGAAAAATCATCTCGCCGCAGACCGGTAATGGGTTTGCTTCTTTTGATGTAATTTCACAATATGTGTTTCTTCTCGTCTGAATATTGGCGGTTCTTGTTGTTCCTATGATGCTGTTTTTCGTATTTAGATCTGCAGGACTTCGAATTTACTGGCTCGTTTTCTATGGCAAGTTTTAATTTCCAAAACTTGATGGTTATGTGTTAACATTGTAGCAGGTTGCCCTATGAATGTCCTTTAGATGCATATTTTGGCTGAATTTTTAATGAATATTCTTAATTTGGCTTTGTAAATTGATACATTAGTTTAAATGAGTCTGTTTATAACTCTGTATGTTAGTCAACTAGTAGCTACTGGGTGATCAAGGAGAAATCCACAATGTGACTGACAGTTTTTCACCGTTGGATGTATGGAAAAGACGTGCCACGAATTTATCCCCAGTGGTTATCAAGGCAAATATTATTATTAGTGGTTGCCCCATTAAATGATTTGTCGTGGTCAAGGTATACTGTCCTACCATCTTTTTCCAAAACGAATTTCTGGCCCATGGATATCATTTAAAGTGAATTCTTGTTTTCTCTTGCCTTATATTTTAGCAGACGAGATATTGGAGGGATCTGATTTCTTTTCAAACGGTCCAGTTTCAATCATAAATTTCTGCAACTTGATGACTTCATTTGTACCATAAATGTTTGTGGCATGGTTATTAAAAATTTTTGCTGGTTCATTATTTCAGATTGAAATTCTGAAGCGGCTACAAAGGGAAGCATTTTCAGATTTAATGAGACTTAGGGACAGACAAGACAAGGTAGAGAAGGTACTATCCTTTTATAGTACACAGAGGAGTAGCCCATTCCAAGAAAATGCCACCCATGTAAAAGGAGAGGTTAATATATTGGGCGCATTGCTATTGATGAGTGTTATTGATAATCATAGCTTCAATGCACTTCGTAGAGCAGGAATCTCGACAGGAATTCACTCAAGATTGACTTTTGAAACAACTGTAAGAGAGAGCGATTATCTTGCTGCAGAGTTTGTAGCTAATCAGAAGGCCGAGGTGGATTTTGGCGTTGATTCTGGAAGTGAACTTACTTTATCTAAAGTTTTTTACAAGGCTAGTGTGAGAGATTGGATATCTGCAATTGTAGTTCCTGTTGGAGCTCGATGTAGGGATATTGCTGTTATTGCAAATCCTTCTCATCAGGTATATTTGAGTGCAAGCACGACTTTCTATGTAGTGTAAGCATGTGCTGTATGCTCATGATGTGTTTTCAGGTTGGGGCAATTCTGAAATAGTTAGGATGAAGTAAACCAACCCATTAAATGCATATATAACCGGATTATTTTGGAGAATGTGTTCAAATAATATGATGGTTTCTATGTAAAATATTAAAATTTTGGAGAATATTATAGAGTCAAGTGGTTGTCCAGTGGGATTAGTTGATGTGAATACAAATTGGTTCACACTCACAAGTATAAAAATGTAATGAGTGCAGTAAACCTCTCTCTATTTGGAGTTATTTGGGTAAAAGGGACAAGGACATTGCCTCTCTGATACAAATTTTAGGAGCTTTCGTAGTTTCATGTAAGAGTTGTTTTGTGGAGAGAACGGGAGAGTGTGAAGTTGATTATGTTCGTGTGCGATAATATTATATGATTCTCTTGTAATCTTTTTCCATCGGGATGAAAGTTGCTTTAGGTAAAAAAAAGTTAATGTAGCTCAAATTGGATAGACCACTATAATTTTTGGTGCCATTCTCTTTTGCTTTAATGCATATTCCTTTCAAATTAATACTAGATGTCAATATTAATCCAACTCTTTGCAGTTGTGTTGTATGATATGATGGTAATGGAGTGCTTGTTCTATATTTAATATAGGGTTGATTTTGTATTCAAATTATTTGGCGGTATTTTTGGTTGTGTAAAATATTTCCTGAGCCCAGTTATTATGTATGTATTTAATATTAATACCAATTCCAACCACCTAGTTGTGCTTGTAGATGCTCCCCTGTATTTTTATCTGAGGAGTGCATTATCTGTTTGGTTTATAAATTATGAAGTTAATCTGAATGGTGCTTCTATGTGGTAGGAGAAGGGTCTTACTGATACTTCATCTTTTAGGCCACCCCTTTTGGATCAGGCTAATGGTGGTGCCATTGGTTTAACAGTGAGAAAATCTAATATCACGGCTTCTTTAGCTCAATTTATTTCTACAGAGAGAATTCAACCAACTTTTGATCGGATTCAGCATTACTTTGGTACTTTTGGGCAACTGGTGTATCAACTTCCAAGAGCAACAAAATTATCGGTTCTGGGTCTTCTCCAAGCAACAAAATTATCTAATCAACATGTCAATCTTGGAGCTCTTACAATTCCAGTGTGTCTTCGTAGTCATAGATCTTCTGAAACAGTAGAGGCATCTGATCCACGTTTGTTAACAGTTCCAGGGGAAGCTATTTCAAGGGGATACATTGCCTTAATGCTGGAGTCGGAGCTTGATGAAGTAACCAGAATTGGAGGTTGGGTTGAGCTGAGCCAATCAAATTCCAAACCTTTGCAATGGGCTGTGTCAGTATCTGATAATAATAGTGAAGATGCCTTAGGTTGGGGAATGAGTTTAAGTGGGATTTTTGGAGGCCCATTAGATGGGGATCAGTTTCAGGTTGAATCTTATGTTAAACTGAATCTGAGTAAGAGATTCAGCTTAAAGCCAGGAATTGCATATGTCACAGACGGCAATGCCAAAATGATGGCCTTTCTGGTTCGGTCTAATTGGTCCCTCTGATTGATCTTAAGAAATGTGTCATTCTTTTCCAGCTTATGTACATTGCAAGAGGGCTTTGGTTTGTCTGAAAAGGTTCATATGTGCCTTTAGCGATTGGATGTTTTTAGACTCAAGTGCTGCTTCCAGAATCTTCTTTGCTAGTAAGGTACTTAACTCTATGTGCATATAGCTCAAAAAAGTTTAAATACTATTTTGATCTCTGTAATTTTGGTTTTGGTTTATTTAGGTTCCTATATTTTTAAAATGTTTATTTGGTCCGCATACTTTAAAATTGTTCATTTTGGTCCTTGTGTATGTAACTTTGGTTCATTTTGGTCCTTATACTTTACAAATGTGACCATTTTGGTCTCTTCATTCTCCTTGAACCAAGGTTGAGAGTATAGAGATCAAAATGAACCAAACTACCAAAGTTAGAAGTATAAGGACCAAAAGTAGTATTTAAACCAAAATAATAAAAATAATAAATAAATACACACACCAACACCGTACACAAAAAAAGAAAAAGAAAAAAAAAAAGGAGCATCAGAAAGAGTCCCCAATTTATTGATTAGTTTTAATTAAACCCTTTGCAAGTTTCCTGATATTCAATGAAGAGAGAGCTGACATATTTGGTTATCTTAAATATTTGACTAACAAACTGAGATTTCCCCCCCTTGAAGTGGCAAATGGGCGAAGCCAACTCCTAATCGGTAGGTGAAAGAAGGTTAAGGTACTTTCTTCCATACTCCATTTGCCACGTCAAAGGAATCATTTCATTTTGTTAAATACATTCACCAAAAGCTTGAACATAACAATCTGTGCTCACTGCTCACTTTCCTTTTGTTTTCTACTTGTGTACTATTAAATAAGGGTTTAATTAAAACTAATCTCAGGCACAATAGAAATTAACTATGCATTTCAGAGACAATTTATAAAATAGTCTTATGTTTTTCCTTGAATCTGCAGGAAAGCTTCTCCTTTTTACCATCATATTCAATTTGATGAATGTCATCGACGATTATTGTAGAAGAGAGCTTAGGAATTACTGCTACAAGGCAAAGTCTCATCATATCTCATCATTTTGCCTTAGCAATTAGCAAATACTTGTTAGAAAATATATGGTAAAGTATTAAATATATACGTTTAGTTAAAGCTTTTGGAAACTTGTTGCATTTTGTAATTAAGGTATTGG GTAAATTGCCGCCCATCTTTCAAATTCAGAGCTTCAACTCGCTTGGTGAAATCGAATTCAATTGTTTGAAGATCGCAAAGGAAACCCTAGAAATTCACTTCTCGTTGGTCCAAGCAACTGTTCTTCAGGTTCCCCCAATCATGGAGCCTGTTGCCTTTGTTGTCGACAAATTGAAAGGTTTCGGCACCGCAACCCAGAATTTCTTTGATGGCTTAGTTCATCGCCGCGAAAAATCATCTCGCCGCAGACCGATTGAAATTCTGAAGCGGCTACAAAGGGAAGCATTTTCAGATTTAATGAGACTTAGGGACAGACAAGACAAGGTAGAGAAGGTACTATCCTTTTATAGTACACAGAGGAGTAGCCCATTCCAAGAAAATGCCACCCATGTAAAAGGAGAGGTTAATATATTGGGCGCATTGCTATTGATGAGTGTTATTGATAATCATAGCTTCAATGCACTTCGTAGAGCAGGAATCTCGACAGGAATTCACTCAAGATTGACTTTTGAAACAACTGTAAGAGAGAGCGATTATCTTGCTGCAGAGTTTGTAGCTAATCAGAAGGCCGAGGTGGATTTTGGCGTTGATTCTGGAAGTGAACTTACTTTATCTAAAGTTTTTTACAAGGCTAGTGTGAGAGATTGGATATCTGCAATTGTAGTTCCTGTTGGAGCTCGATGTAGGGATATTGCTGTTATTGCAAATCCTTCTCATCAGGAGAAGGGTCTTACTGATACTTCATCTTTTAGGCCACCCCTTTTGGATCAGGCTAATGGTGGTGCCATTGGTTTAACAGTGAGAAAATCTAATATCACGGCTTCTTTAGCTCAATTTATTTCTACAGAGAGAATTCAACCAACTTTTGATCGGATTCAGCATTACTTTGGTACTTTTGGGCAACTGGTGTATCAACTTCCAAGAGCAACAAAATTATCGGTTCTGGGTCTTCTCCAAGCAACAAAATTATCTAATCAACATGTCAATCTTGGAGCTCTTACAATTCCAGTGTGTCTTCGTAGTCATAGATCTTCTGAAACAGTAGAGGCATCTGATCCACGTTTGTTAACAGTTCCAGGGGAAGCTATTTCAAGGGGATACATTGCCTTAATGCTGGAGTCGGAGCTTGATGAAGTAACCAGAATTGGAGGTTGGGTTGAGCTGAGCCAATCAAATTCCAAACCTTTGCAATGGGCTGTGTCAGTATCTGATAATAATAGTGAAGATGCCTTAGGTTGGGGAATGAGTTTAAGTGGGATTTTTGGAGGCCCATTAGATGGGGATCAGTTTCAGGTTGAATCTTATGTTAAACTGAATCTGAGTAAGAGATTCAGCTTAAAGCCAGGAATTGCATATGTCACAGACGGCAATGCCAAAATGATGGCCTTTCTGGTTCGGTCTAATTGGTCCCTCTGATTGATCTTAAGAAATGTGTCATTCTTTTCCAGCTTATGTACATTGCAAGAGGGCTTTGGTTTGTCTGAAAAGGTTCATATGTGCCTTTAGCGATTGGATGTTTTTAGACTCAAGTGCTGCTTCCAGAATCTTCTTTGCTAGTAAGGAAAGCTTCTCCTTTTTACCATCATATTCAATTTGATGAATGTCATCGACGATTATTGTAGAAGAGAGCTTAGGAATTACTGCTACAAGGCAAAGTCTCATCATATCTCATCATTTTGCCTTAGCAATTAGCAAATACTTGTTAGAAAATATATGGTAAAGTATTAAATATATACGTTTAGTTAAAGCTTTTGGAAACTTGTTGCATTTTGTAATTAAGGTATTGG ATGGAGCCTGTTGCCTTTGTTGTCGACAAATTGAAAGGTTTCGGCACCGCAACCCAGAATTTCTTTGATGGCTTAGTTCATCGCCGCGAAAAATCATCTCGCCGCAGACCGATTGAAATTCTGAAGCGGCTACAAAGGGAAGCATTTTCAGATTTAATGAGACTTAGGGACAGACAAGACAAGGTAGAGAAGGTACTATCCTTTTATAGTACACAGAGGAGTAGCCCATTCCAAGAAAATGCCACCCATGTAAAAGGAGAGGTTAATATATTGGGCGCATTGCTATTGATGAGTGTTATTGATAATCATAGCTTCAATGCACTTCGTAGAGCAGGAATCTCGACAGGAATTCACTCAAGATTGACTTTTGAAACAACTGTAAGAGAGAGCGATTATCTTGCTGCAGAGTTTGTAGCTAATCAGAAGGCCGAGGTGGATTTTGGCGTTGATTCTGGAAGTGAACTTACTTTATCTAAAGTTTTTTACAAGGCTAGTGTGAGAGATTGGATATCTGCAATTGTAGTTCCTGTTGGAGCTCGATGTAGGGATATTGCTGTTATTGCAAATCCTTCTCATCAGGAGAAGGGTCTTACTGATACTTCATCTTTTAGGCCACCCCTTTTGGATCAGGCTAATGGTGGTGCCATTGGTTTAACAGTGAGAAAATCTAATATCACGGCTTCTTTAGCTCAATTTATTTCTACAGAGAGAATTCAACCAACTTTTGATCGGATTCAGCATTACTTTGGTACTTTTGGGCAACTGGTGTATCAACTTCCAAGAGCAACAAAATTATCGGTTCTGGGTCTTCTCCAAGCAACAAAATTATCTAATCAACATGTCAATCTTGGAGCTCTTACAATTCCAGTGTGTCTTCGTAGTCATAGATCTTCTGAAACAGTAGAGGCATCTGATCCACGTTTGTTAACAGTTCCAGGGGAAGCTATTTCAAGGGGATACATTGCCTTAATGCTGGAGTCGGAGCTTGATGAAGTAACCAGAATTGGAGGTTGGGTTGAGCTGAGCCAATCAAATTCCAAACCTTTGCAATGGGCTGTGTCAGTATCTGATAATAATAGTGAAGATGCCTTAGGTTGGGGAATGAGTTTAAGTGGGATTTTTGGAGGCCCATTAGATGGGGATCAGTTTCAGGTTGAATCTTATGTTAAACTGAATCTGAGTAAGAGATTCAGCTTAAAGCCAGGAATTGCATATGTCACAGACGGCAATGCCAAAATGATGGCCTTTCTGGTTCGGTCTAATTGGTCCCTCTGA MEPVAFVVDKLKGFGTATQNFFDGLVHRREKSSRRRPIEILKRLQREAFSDLMRLRDRQDKVEKVLSFYSTQRSSPFQENATHVKGEVNILGALLLMSVIDNHSFNALRRAGISTGIHSRLTFETTVRESDYLAAEFVANQKAEVDFGVDSGSELTLSKVFYKASVRDWISAIVVPVGARCRDIAVIANPSHQEKGLTDTSSFRPPLLDQANGGAIGLTVRKSNITASLAQFISTERIQPTFDRIQHYFGTFGQLVYQLPRATKLSVLGLLQATKLSNQHVNLGALTIPVCLRSHRSSETVEASDPRLLTVPGEAISRGYIALMLESELDEVTRIGGWVELSQSNSKPLQWAVSVSDNNSEDALGWGMSLSGIFGGPLDGDQFQVESYVKLNLSKRFSLKPGIAYVTDGNAKMMAFLVRSNWSL
BLAST of ClCG08G014060 vs. TrEMBL
Match: A0A0A0LQH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346070 PE=4 SV=1) HSP 1 Score: 706.8 bits (1823), Expect = 1.6e-200 Identity = 365/426 (85.68%), Postives = 385/426 (90.38%), Query Frame = 1
BLAST of ClCG08G014060 vs. TrEMBL
Match: M5XD34_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005807mg PE=4 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 9.3e-129 Identity = 253/444 (56.98%), Postives = 327/444 (73.65%), Query Frame = 1
BLAST of ClCG08G014060 vs. TrEMBL
Match: B9H512_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s26440g PE=4 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 1.2e-128 Identity = 252/430 (58.60%), Postives = 305/430 (70.93%), Query Frame = 1
BLAST of ClCG08G014060 vs. TrEMBL
Match: W9QZ86_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016021 PE=4 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 3.8e-122 Identity = 236/430 (54.88%), Postives = 304/430 (70.70%), Query Frame = 1
BLAST of ClCG08G014060 vs. TrEMBL
Match: E0CQB1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14850 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 5.1e-119 Identity = 233/426 (54.69%), Postives = 298/426 (69.95%), Query Frame = 1
BLAST of ClCG08G014060 vs. TAIR10
Match: AT1G11320.1 (AT1G11320.1 unknown protein) HSP 1 Score: 368.2 bits (944), Expect = 6.6e-102 Identity = 193/425 (45.41%), Postives = 269/425 (63.29%), Query Frame = 1
BLAST of ClCG08G014060 vs. NCBI nr
Match: gi|659089089|ref|XP_008445322.1| (PREDICTED: uncharacterized protein LOC103488388 [Cucumis melo]) HSP 1 Score: 720.7 bits (1859), Expect = 1.5e-204 Identity = 372/425 (87.53%), Postives = 389/425 (91.53%), Query Frame = 1
BLAST of ClCG08G014060 vs. NCBI nr
Match: gi|778670388|ref|XP_011649461.1| (PREDICTED: uncharacterized protein LOC101215602 [Cucumis sativus]) HSP 1 Score: 706.8 bits (1823), Expect = 2.2e-200 Identity = 365/426 (85.68%), Postives = 385/426 (90.38%), Query Frame = 1
BLAST of ClCG08G014060 vs. NCBI nr
Match: gi|596131239|ref|XP_007222167.1| (hypothetical protein PRUPE_ppa005807mg [Prunus persica]) HSP 1 Score: 468.4 bits (1204), Expect = 1.3e-128 Identity = 253/444 (56.98%), Postives = 327/444 (73.65%), Query Frame = 1
BLAST of ClCG08G014060 vs. NCBI nr
Match: gi|224083115|ref|XP_002306949.1| (hypothetical protein POPTR_0005s26440g [Populus trichocarpa]) HSP 1 Score: 468.0 bits (1203), Expect = 1.7e-128 Identity = 252/430 (58.60%), Postives = 305/430 (70.93%), Query Frame = 1
BLAST of ClCG08G014060 vs. NCBI nr
Match: gi|658042985|ref|XP_008357121.1| (PREDICTED: uncharacterized protein LOC103420855 [Malus domestica]) HSP 1 Score: 458.4 bits (1178), Expect = 1.4e-125 Identity = 254/446 (56.95%), Postives = 314/446 (70.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|