ClCG08G008060 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTTGAGGATCTCGGTATCGAAGCAAAGGAAGCAGCTGTACGCGAGGTTGCCAAGCTTCTACCGATTTTGGAGCTTCTGCAGTCAATTATTAGTTCGATCAAGGCTGATTACATTACTCGTCAGCAGGTACTTGTTTTCGACGAATTTCTATCACATTCTTCAACTCCTTTGATCTTCTGCAAAACATGTCTCAATTTTCTCTTGCTTAATTTTTTGTTCCAAACTTTTGTGCTGGAGCTTTGCAGGTGCAGAGCTAATAATTCTACTTGTTTTTATGCTTTGTTGGTAGGATGACAAATTTTTTATTTAGTTTAGTAAAAAAAAGTACCAGAATGCTGCATCATTACTTGTCTGGACAGTGATCCTAGTCGGTCTAAAAACTTCTCAATTTCTCACCATTTCTTCCTAGGAACATATATAGTCTACAAAAAATTCAGGAGTTGGTGCTTTTAAATAGTTGACAAATGAAATGATGTACATCCTTGATAATCAAGAATAAAAACCACTGCAGCAACTAAAGCCTGAATGCTGGTCAGGCTTTAACTATAACACTTGTCCGTGTTATCAATTTCGGATCTCACTTAATGTTTCTGGTAATTGAGTCTGGATGTTGCACACCACATCACACCACAAGTCAGGTACTCCTCTTAATGTGAACTTCAGAACATAAATTCCCCCATTTTCCTAATTTTTCTGCATAATTGGGGCATTTGATTAAATTTCTGGGTGCAAATGCAACATATGTATTATAGAAGATGGAAGCTCTGTAGTTTATTGTTGCAGTTAACAGCGTCAAAATAGATTTAGTTCAACTTCCCGCATAGTATTAGTCAATGGTACCGCTACTTAAAGTTGTTGATCCGAAAATACGAACCTATTTGAATTGACTAGAAAGAAAAATGTTCTTAAAAAAAGTCATTTTATTTAAACTCTTTTGATAAAAATTGTTTAAAATACACTTTGAGAGTGTTTCAAAAGTTGTTTCGACTGGTTCCCAAACACTTCGATCTTTTCCAAAATGACTTATTTTCAAAATTAAACATTGGAAAAGTTAAACCAAACACACCCTTCAACTGAAGTATAATTGCTTGTATTCTGATGCTGTATAGGCACAATTTCTATGTGTTTCTGTTTGTCTTATCTTTCTGTCAATCATATTGTGTTGGCCTTGTTTGTGGGGTTTACTGAACGCAATAGTTCTTTTTTTGTGATTTTGAATGTTGCTCATACTTCATTTATAGGCAAATGATGCACATCTCAGTACAATGGTTGCAGAGCAGGTACAACTGACAGCTTTTTCCCATAATATTTTAAGAGATATGCTGTCTCACCATTGTGTATTACCATATTTACTGTTTGGACCAAACGTTCTGAGATGCACTTGAAGATAAAGAAGCTTGTGTTGCTGAAAGAGTCTTGCTTTCCCAACATGAATGTAGGTTGAACAAGCACAAGCTGGCTGGCGTCACTTTCTTTATCTGGAAAGACAATAAATCAGCTTCGAGAAAACTTCATTTCAATCGAGAAGTATGAAAATAGATGCATTAGCAGTCAAATAATTTTTTGATTCAAGTATTTTTACAACTCAATTGCTATGTGCATTCAGGTTATGTCGAGAATGCCAAACATTAATAGAGAACCGCAATCAGATAAAGCTCCTTAGCAATGCAAGGAATAGCTTATTGACAACCTTGAAGGTTGGTCACCCTTCTCCGTAATTATAAATGTGATGTAGCTCTTCTATTTTTTGTTAGGATCCAATAATTTGGATTATAAAAGCTAACTATCAACTTTTCTTATAGCGAATTCTTACATATCCGGCATGAAATACTAAATCCAAAATCGATCCTCTCTCCTTAAGCTCAAGACCTTTTTAACTTTATTTATTTATCTATTTGTTTTTTCTCCATGGTGGTTAGCTGCACTTATACGGTTTTGTAGAACTAATGTTTGAGCCTTTGACTAGGATGTTGAGGGCATGATGCCCATATCTGTTGAAGCAGTTGAGGCGCGTGATTCTTTGAGTGATGATTCAGAGCTTATAAACACTTATGAGGTGAAGTGGTCTTGTTGTCGTTGTTAGGGTTGAAAAAGTTTTCTCATCATTTAGGACATCTATGCATTTGTCTTAAAAAATTGAACAATGTAGTATCTTCATGTAGCTCTTCATGCATTTATAATTTGGCCCTTATAGTCTTTCCTATTACATGCACACTTGTCACAGAGGCTAACCGCACTTGATGGAAAACGGAGGTCTGCTTTAGCAGCTGCAGCATCTCACAAAGAAAAGGTTGGAAGACTAAGGTATTTGTCCCAAGGTAATGATTGA ATGATGGTTGAGGATCTCGGTATCGAAGCAAAGGAAGCAGCTGTACGCGAGGTTGCCAAGCTTCTACCGATTTTGGAGCTTCTGCAGTCAATTATTAGTTCGATCAAGGCTGATTACATTACTCGTCAGCAGGCTTTAACTATAACACTTGTCCGTGTTATCAATTTCGGATCTCACTTAATGTTTCTGGTAATTGAGTCTGGATGTTGCACACCACATCACACCACAAGTCAGGCAAATGATGCACATCTCAGTACAATGGTTGCAGAGCAGGATGTTGAGGGCATGATGCCCATATCTGTTGAAGCAGTTGAGGCGCGTGATTCTTTGAGTGATGATTCAGAGCTTATAAACACTTATGAGAGGCTAACCGCACTTGATGGAAAACGGAGGTCTGCTTTAGCAGCTGCAGCATCTCACAAAGAAAAGGTTGGAAGACTAAGGTATTTGTCCCAAGGTAATGATTGA ATGATGGTTGAGGATCTCGGTATCGAAGCAAAGGAAGCAGCTGTACGCGAGGTTGCCAAGCTTCTACCGATTTTGGAGCTTCTGCAGTCAATTATTAGTTCGATCAAGGCTGATTACATTACTCGTCAGCAGGCTTTAACTATAACACTTGTCCGTGTTATCAATTTCGGATCTCACTTAATGTTTCTGGTAATTGAGTCTGGATGTTGCACACCACATCACACCACAAGTCAGGCAAATGATGCACATCTCAGTACAATGGTTGCAGAGCAGGATGTTGAGGGCATGATGCCCATATCTGTTGAAGCAGTTGAGGCGCGTGATTCTTTGAGTGATGATTCAGAGCTTATAAACACTTATGAGAGGCTAACCGCACTTGATGGAAAACGGAGGTCTGCTTTAGCAGCTGCAGCATCTCACAAAGAAAAGGTTGGAAGACTAAGGTATTTGTCCCAAGGTAATGATTGA MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQALTITLVRVINFGSHLMFLVIESGCCTPHHTTSQANDAHLSTMVAEQDVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLRYLSQGND
BLAST of ClCG08G008060 vs. Swiss-Prot
Match: SEC6_ARATH (Exocyst complex component SEC6 OS=Arabidopsis thaliana GN=SEC6 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.4e-30 Identity = 93/174 (53.45%), Postives = 104/174 (59.77%), Query Frame = 1
BLAST of ClCG08G008060 vs. TrEMBL
Match: W9R5W3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006858 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 4.9e-35 Identity = 101/174 (58.05%), Postives = 113/174 (64.94%), Query Frame = 1
BLAST of ClCG08G008060 vs. TrEMBL
Match: A0A067KI37_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11011 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 4.1e-34 Identity = 99/174 (56.90%), Postives = 112/174 (64.37%), Query Frame = 1
BLAST of ClCG08G008060 vs. TrEMBL
Match: A0A061DKY1_THECC (SEC6 isoform 3 OS=Theobroma cacao GN=TCM_001597 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 5.4e-34 Identity = 97/174 (55.75%), Postives = 110/174 (63.22%), Query Frame = 1
BLAST of ClCG08G008060 vs. TrEMBL
Match: A0A061DJ92_THECC (SEC6 isoform 1 OS=Theobroma cacao GN=TCM_001597 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 5.4e-34 Identity = 97/174 (55.75%), Postives = 110/174 (63.22%), Query Frame = 1
BLAST of ClCG08G008060 vs. TrEMBL
Match: A0A165Z0L4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_013169 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 5.4e-34 Identity = 94/151 (62.25%), Postives = 107/151 (70.86%), Query Frame = 1
BLAST of ClCG08G008060 vs. TAIR10
Match: AT1G71820.2 (AT1G71820.2 SEC6) HSP 1 Score: 134.0 bits (336), Expect = 7.7e-32 Identity = 93/174 (53.45%), Postives = 104/174 (59.77%), Query Frame = 1
BLAST of ClCG08G008060 vs. NCBI nr
Match: gi|703093611|ref|XP_010094986.1| (hypothetical protein L484_006858 [Morus notabilis]) HSP 1 Score: 155.6 bits (392), Expect = 7.0e-35 Identity = 101/174 (58.05%), Postives = 113/174 (64.94%), Query Frame = 1
BLAST of ClCG08G008060 vs. NCBI nr
Match: gi|802621245|ref|XP_012075904.1| (PREDICTED: exocyst complex component SEC6 [Jatropha curcas]) HSP 1 Score: 152.5 bits (384), Expect = 5.9e-34 Identity = 99/174 (56.90%), Postives = 112/174 (64.37%), Query Frame = 1
BLAST of ClCG08G008060 vs. NCBI nr
Match: gi|1021041688|gb|KZM99469.1| (hypothetical protein DCAR_013169 [Daucus carota subsp. sativus]) HSP 1 Score: 152.1 bits (383), Expect = 7.8e-34 Identity = 94/151 (62.25%), Postives = 107/151 (70.86%), Query Frame = 1
BLAST of ClCG08G008060 vs. NCBI nr
Match: gi|590709368|ref|XP_007048534.1| (SEC6 isoform 3 [Theobroma cacao]) HSP 1 Score: 152.1 bits (383), Expect = 7.8e-34 Identity = 97/174 (55.75%), Postives = 110/174 (63.22%), Query Frame = 1
BLAST of ClCG08G008060 vs. NCBI nr
Match: gi|590709360|ref|XP_007048532.1| (SEC6 isoform 1 [Theobroma cacao]) HSP 1 Score: 152.1 bits (383), Expect = 7.8e-34 Identity = 97/174 (55.75%), Postives = 110/174 (63.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |