ClCG08G005170 (gene) Watermelon (Charleston Gray)

Overview
NameClCG08G005170
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRegulator of Vps4 activity in the MVB pathway protein LENGTH=409
LocationCG_Chr08 : 16309340 .. 16321480 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAGCTTGTGGATTTAAAATTCCAATCCGATTTAGAAAACAAAAGAATGAGAAGAATTTTGAATCCTCTTGTGGGAAGAAGTTTCAAGTCCTCTGGTTTCAGACGTTTGGTCCAATCTGCTTTCACGCGCCTTCAATCGCTGAAGAACTATCGCCATGGAAGATACTCCGAAGATCGCAACGACGTCGTTCGCCTCCTTCAAGATGGCCTTCCCAAACTTGCTCTCTCTCGTGTACGCTTCTCATCCTTTTCTTTTTCCTTTACTTTCCCACCATTTGTGTATCAATTTCCATTTAAAACTTTCCTTTTTTTTTTTTTTCCTCCTAATTTCCTTTTTGGCATTAAATAAATTGTTGGCTTAGAAATTTTTTTTTGTACTTATAAATTGGATCTATAATATTTTAAACAATATTAGGTGGGAAAAATTTTTAACTTCTTTCTTTCCCCTTAACTTTTCATTAATGACTCTTTTGCCCTCATACTCACACTCATACCTTTTCTTTTCTTTTTCTATATAATTAAACTTTTTTCTTTTTTTCTTTTTTTTTTTTTTTTGCCATTTTATGTTTCAACCATTCCTATTTTGTTTTCACTTCCTTTCCTACTTTTATTGTACCTCTATTTTTTTTCTACCTTTCATGCCTTCTTTTTCTTTTTCTTTTTCTTTTTCATTTAAATTTACATTTTCATTTTGTTATTAGATTTTTCAACGATTCCTATTTTGTTCTCGAGAGAAACATTGAAATGTGATCAAAGGAATAGAATTTAGAAGTTCATTTTTGTTGGATGAAGCGACATGGTTAGATTTTACGAAGGTACAATTTTTTTTAATAGCTTATCTGAAAAAGCATATGTAAAATTTAACTCAAAAAACTATTTGGAATTTTTCCTCTAATTAGATAGTTTATTATTAATTTGTTTTCTCAAGTAACAAACAAGTTCAATGTTGCGAAATGATTGATTTTATGTATGTTAAAAAAAAAAAAAAAAAAATCAATTGTATCAAGATTTCTATATCCAGCCAATCCAATTTTGTTTTGTTTTTTAAATTTTAAGAAGATATAATTATTTACAGAATGGAAATATAATTCACACAACTATTTAAAGTTTTTCTTTCACAAAAGTTCTTAGATAACTAATGTATATTTATATTATTTTAAAATTACATTTCACTATTGTTTACACCTTTTTATTTTTATTTGAATTCAATGTTTATGGTTAATATTTGAAAAGGTAAAAAATGTTCTTAAAGTAAATTTTTGTTTCGAATTGTTAAAAATTTTTATTGAAAAAATCAAAATAAAAAATTAATTGTTGTCCAATCTATAAAATTCTACAATGTTTTAGAAAATACGACATAGCTTCAAATTTTAAAAAAATAAAAAATAAAAAATAAAAAATCAAGTGCGTATCGTTATTAAAGTTAATGGTAATTTATTTTTACTCAAGACCATTTAAGATTATAAATGAATATATATTTTTCCACTTTTATCTCTTTATTTAATTTTAAACTTCATGTCTAATATTTATTAAAATTATATTTGCTCAACCATTTATATTTCACTTTATGAAATTATATTTCAAAGAGTTTCAACTACATCTAACACATTTCATATTCATCATGAATTAACTAATAAAACATACATATAGTCTTAATCATCATCTTTTTCATTACTTTTAAACTTCTCATTCGATATTTATCCTATTTAAATTTAAATAAAAGTATATTTATTTAAAATTTTATATCCTCTAACCAATATATAATAAATGACAAAACCGTTGGATATTGTACTCTTTAAATTTTTACGATAATATCTTCTTTTTTTTCGCCTTAAATTTGACTAGTTGTAACAATTTTAACCTTAACCTTTCAATTATCAATTTAAACTTCAAACTTGAATAAGTGTATCAATTTACACTCCTAGTTTAGTTTTGGTTTCAATCACCATTAGATCTATAGGTTGATGACTCAAACAACTCGATCAATCCAATTCGTATGATTTTTGGTTGGGTTGGATTTAAATAAATGAAAACTTTATGGGTTGAGAGTTATTTCATGGGTTCACCTAAAATATATGAAATAACCTTAACTTATTATTAATTCCAAAAAGTATGTTTTTCACTAACAATACAGTTATATATACATATATTTATGGGTTGTTTTCAAATATAGTGAAATAAGCTAACTTATTTACAAATATAGCAAAATATCATTTATCAGTGTCTATCACTGATAGACAATAATAGATGATAGTAGTCTATTAATGTCTATCATTGTCTATTACTGATGGGTAAAGACATTTTGCTATATTTGAAAATATTTTCAACAATTTTGTTATTTAAAACAATTATTATCCTATATTTATTTAAATGTTACGTAATTACATGATGTTTTTAGATTATTTATTCTCCAACAACTATTAAAATATTTTTTAACACTTCGGACAGAATATCTTCAATATATAAATTGAAATTGAGTTGTTAATCTTAATTCAATACATTAGAATAATTAAATATCTTCTTTTACATATAAACATTTTACTTCTCCTTAAAACAAATTTTTAAATAATGACTTAAGTAAGCCGACTAGCCGAACCCAAATGTTTCATGGCTTGGTCGGGTTGTGTTTATTATTTAAGTAAGGGTTATGGGTTGAAGAAACTTATAATCTGTAGAATTGGGTTGGGTCTAAGAAGTGTTTCAACCCACAAATTATAACACCCCAAGTTTAGGAGAGAGACATGAATGAACCGAGTCACATCCGAATGAGAGGGATCCTAAGAATATGAAAGTATTGCTAAGCTTAAAAGAAGTTGAAAGTTACTACGTATTACCAACAAGATGTACCTACCTTTTCGGTTGCTCAATCATAGGAATTTCATAGTTAAGCATACTTAGCTTGAACCAATCCTATGTGTGGGTGGCCTCTTGGAAATTTTCCTAGGAAGCATGTGAGTGAGGACAAAGCATGCTAAAAGAACCTGTGTTAGTTTGCCTTCAATCGCGTTCTCATGTTCTCCCTTAATGTCGTTACCATCAATGACGTCCAAGTGTGAGAAAAAATCTAGTTGAGGAGTTTGAGCTTAACTTAAATGTGGACATGTTGGAACAACTACTCTGATAGACAGCAATTAACAGTACGAACTGCAACCATCAATAACAAACAACCCGGACAGACCCTACAAAATAGAAACGCATGATAGGCTGAGTCGCGAAGCTCGCTCTCTTTAAGATGTTTTGTGGCTCTATCAGAGTACAAGCAGTTCTTCAAGATACCACGAAGTCCCCAAGATAAAACAGTCTTAGCGGTCAATCGAACTTGTGGAGGAGAGTTGTCCTCCCAGCTTAACATGTGGCAGCTTGATGTCCAATGAACGTACACGTACGGCTAGGAGGGAAACCGACGACTATTCTCAACCTAACACTTGAAGAATCTTGTTGACTGTTCTCGACTGAACACATGAACAGAGGTTCAAAAAAATATCTAAAAAATTGTTATATAAAAAATTCTTTCTTTCACGCCTCGCCCATCCTGACAACGACGACGGCATGCATCCTCACTCTTTCTAAAACTCAAGTTTCCCCTTGGGCTCAAAGTTAAATGGGTAAGGGGGAGTTAATAAAGAAGAGTCCCACTTCTAAAATAACCAATGTGGGATTCGTAAAATACCAAATCTCCTTTATTCAAAACAAATTTTTTCACTAACAATTCCCCACTTGAAAAACTTTTTCGAACACAAGAAATAAATAATTCATTGAGCAAAATATGTAACGTTGTGCATAAGCAAAGGTGTCTTGTGACTTGAACCTTTACATAGTGAAGATGATCCAGAACAAACCAGATTAACCCTTGGTTTTAAACTCTATCTCCAACAACATTTTACACATGGCATTACTAGGGTGTAGTTCGTAAACTCGTGTTTTAAGGCCTTGCACATGTATCCCAGTGTAGTGAACACTCTAGAGAATTTGCCTATTATTCCATAGGAAGCAACTCTCACTTCCACATTCACGTAGGTGAGTCTATCAAGGGTACTCCTGCAGCTAGGTACTCCACCTGACATCAGGTATAGATCTCATTAAGAACTAAGTTCAACCTTACATACGCTTCAAGATATCATACCGAGACTCTAGGTCATAGGAAGGGAACTCGATGTTTACTTTGCATGATTTACTTCATATCACTTGTGATCAATTATTACCCTTTGAACCTATTTTTTGGGATCTCCAATCTGCTGGTTGGGTTTACCTCACAGGTGATTCATCTCTCTATAGGCAAGAGTCTCATCCTTTCTGAGGTTTTGAAAACCTTTTCTCTGGCCAATCCTTTGGTCAAATGATCTGCCAAGTTATCATCAGTCCTTATATGATCCACTCTAACAACATCAGTAATGAGAAGCTCTCTAATGGTACTGTGCTTATGACGTATTTGTCGTCTCTTTCTGTTGTAGTAACGTTTCTGAACTTTTACGATTGCTGCAATACTATCGCAATGGATCAAGATGGCTGGTACCGGTTTTTCCCATAAGGGAATCTCTGATAGAAGACTTCTAAGCCAACCTGCTTCTTCACTGGCGTTGCCAGTGCTATCATTTCTGACTCCACATTGACTGAGCTAAGATTGTCTGTTTTTTAGATTTCCAGGAAACAACTCCACCTGTTATATTGAAGATATAGCCACTTGTAGCTTTTGAGTCATCTGAGAGGGAATTCCAGTCTGCATCGCTGTAGCCTTCTAGAACAGCGGGAAACTTCTGATAGTGCAATCCTAGGTTTTGGGTTTTCTTTAAGTACCTCATAACTCTTTCTATAGCACTCTAGTGCTTTATACTAGGTCTGCTTGTAAACCTACATAGTAACCCTACAACATAAGCTATGTCAGGTCTAGTGCAATTAGTAGCATACCTCAAGCTGCCTATGATGCTCGCATACTCGAATTGATTAACACTGTCACCAGTGTTCTTGAACAACTTTACACTAGGGTTGTAGGGTGTACGCGCTGGTTTACGATCTAATTAGTTGTATTTCCTAAGAATCTTTTCTACCTATTTAGATTGATTTAGGGAAATTTCCTTTTTGAACCTAGTAACTTTTATGCCTAAGATCACATTGGCTTCTCCTAAATCTTTCATATCGAAGTTTGCACACAATATGGATTTCATATCATTAATGACGTGCAGGTTCGACTCAAATATTAACAAGTCATCTACATATAAACATAAGATTGTGTAAAGACCGTCCTCACTCTTATAGTTGATGAATTTATCACTTTCATTAACCTTGAAACCTTTGGAAAGGATTAGGTTATCAAACTTTTCATGCCATTGGTTAGGAACTTGTTTTAAGCCATAGAGAGATTTATCTAACTTACAGACTTTGTTCTCCTGACCATGGATCACAAAACCTTCTGGTTGTTCCATATAAATCTCTTCTTCGAGATCACCGTTTAGGAAGGCAATCTTAATGCCCATATGATATACCATGAGGTTGTTTAAAGAAGCAAGAGAGAACAAAACACAGATAGACGTAATTCTCAAGACAGGGGAGAAGGTGTCGAAGGAGTCTGTGTTCTCTCTCTGTCTAAAGCCCTTGGCCACCAATCTAGCTTTAAACTTGTCTATTGATCCATCAGGCTTAAGTTTTTTTCTTAGTATCCACTTACAACCTATGGCCTTACAGCCTAAAGGGAGGTCTACTAGGTGCCAAGTCCTATTTGACTCTAGAGAATCCATCTCGTCATTTATCGCTTCTTGCCATAAGTTGGCACCGACAGAGGACAAGACTTCTTTTAGGTCTTTTGGGTCTTCTTCTACGTTAAAGGTTTGGAAATCATCCCCAAAGCTTTTAACAGTTCTAGACCTTTTACTCCTTCTCAACTCCAAGCTGAGATCTTCAAAGGAGATAGGATTTCTAATTATAGGGCGACTATTGGAGCTTGTGCCCCCATTATTTCTAGATTTAAAAGAAAATTTATCCTCAAAGAAGTCAGCGTCATTTGACTCAATGACCACTCGATTAGCTAGATCATAGAACCTATAGGTTTTACTATTTACTGTGTACCCTATAAATACACACTTATAGCCTCTATTGGCAAGTTTTCTTCTTTTGGGATCAGGAATCCTTACAAAGGCTAAGCAACCCCAAGTTCTAAAATAGGATAGGTTAGGTCTTTTATTCTTAAGAACTTCGTAGGGTGAAGTTGAGCTTTTAGACTTAGATATTCTATTTAGAACGTAACAAACGGTAAGGATTATTTCATCCCACCAATAAGAAGCAGCTTCTTAATTCAAAAGAATAGCAACTACTAGCTCAGCTAGAGTTCTATTTTTCTTTTCGGCTTTACCACATTCATTTCAGGAGAGTGAGGTGCAGTTTTTTCATGTATTATTCCACGTGATTTATAAAAATCGTTAAAACTGTCTGAGTCATACTCAGTTCCCCCATCACTACAAAGTCTTTTTTACTTTTCTATTATGCTGAGTTTCTAATTCATTCACGAATTGTTTAAAGGCATCAAAAGCATCATTTTTATTTCTCAGCAAATATATAAAAGTAAAATCAAAGCAGTCATCAATAAAGGTGATAAAATATCATTTACTATTTCTAGTCAAGATGCCATCAAATTCATATATATCTGAATGAATCAAGTCTAGAGGCTCAGTTTCCCTAAGAGCAGATTTATGCGACGTTTTAGTGATCTTAGCCTGACTACAATATTTGCATTTATCAAAATCATTCAGAGATATCTTAGGAATCATTTCCAACCTACTCATGTTACTAATTATTCGTTTGTTAACGTGACAAAGTCTAGCATGCCAAATATTAACAGAACACAACATATACACAAAAGAATTCATTTTATTAGCAATCAAGTCAATTTAAACATGCCTTCCGTAGCATATCCTTTTCCAATAAATACATTGTTTTTAGTAAAAGTAAATTGGTCTGCCCTTATCGTTTGAGTGAAGCCGTCCTTGTTGAGGAGGTATCCCCAGACTAGATTCTTCCTTATCTCTGGAGTGTGCAGGACCTCCCTAAGAGTGAGAGTCTTCCCAGAGGTAAATTTCAACTCCACCTCGCCAATTCTAGCAACTTTCATCAAGTGATGATCCCCCAACAGAATATTCTTATCTTTAGTTTCATTATAAGTTTTAAATAAACTAAGGTCGTGACAAACATGGCGCATAACGCCAGTGTCTATCCACCACCCCTCAGAACTACCGATCACATTTACTTCTGTGATCATGGCCACTAATTCCTCTTCAGTTAGGTTCACCTGCCCAGTAGGATGACGCCTATTCCCACAGTTCCTAGTCATATGTCCAGGTTCATTATAGTTAAAGCAAAGGAACTATATTATTTCTCCTGTGTTTCTTTTTGTTCTGTTGGTTGTTGGATCCGCGGTTCTAACCCTTTCTCTAAGTCCCCTTCGACTTCTGGTCAAACTTTACAGCTGCTAGAGCGGGGTTCCTTGTCACAAGATTTATCCCTTCCCTCTAGTCCTCCTTTCGAGCCTTCTCCTCTATCCTCAGCCGGGTGATTAGACTTTCCAAGGAGAATTCCATGGTTTTGTGCCTTAGAGTGTTTTTGAAATCCTTTCACAATGGATGTAGCTTGTCAATAATAACAGCAATTTGAAATTGCTCGTCTAGAGGCATACTTTCACTTATTATTTCGTGGGCAATTTTCTACTGTTCATGTGACTGGACTTCCACTGACTTGTCATCCGTCATTTAGAACTTCATGTAGTAGCTGACGGCATACTTCTTTGAACCAGCTTCTTCGGTGTCGTAGTTCTTCTGTAGGGCATCCCATACTTCTTTTGATGTTTTCATCATGTTGTAATAATAATAAAGATCATTAGTCAAACCATTTAAAATAAATTTTTTGCACATAAAATCTTTTTCCTTCCACTCAGCAGCATCCTTTAGTTGATCTTTGGTTGGATTGGTTTTCGGGACAGCGGCGGATTCGTGATACAGAGGTCAACTACTTTCTTGACCGTCAGGAATAACAGCATCTTTTGTTTCCACCGTTTGAAATTCGCCCCTTCAAAGCGGAAAGGACGGTTGAGATCAGAGGACATGATGTCGTTTTAGGTTGACAGTGCCATCACAACAGCGGTTGATCATTTTAAAATTGTTGGAACAACTACTCTAATAGGCAGCAATTAACAGCACGAACTGCAACTGTCAGTAACGAACGACTCGAATAGACTCTTCAAAATAGAAACTCATGACAGGCTGAGTCGCGGAGCTCGCTCTCTTTAAGATGTTTCGTGGCTCTGCTAAAGTGCAAGCAGTTCTTCAAAATACCACGTCGTTCCCAAGATAAAATAGCCTTAACAGTCAACCAAACTTGCATCTAGACCGATTGATAATGCTAACACCCTTCTAATATTTTGCTAAAAAACGTGAATAAAATAAAGGTTTTACAAATAAATTATTTTAGAAAGAAGTTTTTGTGAGGAGAGTTGGGAGATGAGATGTGGGAAGGGAAGATGACAAAAAGAAGTGAGGAAGAAGTGAGGGGAGGAAGCAGCATTTATAGTGTTGGTGACCAACGGTCAGATGCACTACTTCCTCCCAGCTTGAGGAACACTGTTCTCAACCGAACATGTGGACAAAGGTTCAAAAAAATATCTAAAAAATTTTTATATAAGAAATTCTTTCTTTCACGCCTTGCCACGCCCGTCTGGATGACGGTGGTGACGCACGTGCGAGTGGAGATCCTGATAAACCCAGCTTGCACTATCTCTTCACCCTTTCTAAAACTCGGGTTCCCCCTTGGGCCTAAAGCCAAAGGGCTAAAGAGGAGTTAGTAAAGAGGAGTCCCACTTCTTGTGGGATTCTTAAAATATCAAATCTCCTTTATTCAAAACAAATTTTTTCACCAATAGGACAAGAACAAAAAAAAAAGGTGGTGATGGACAAAAAAAAGCCCACGAATTCAATAAACTAGTCATATTCGACCTTGTCAACCCTGTCGACGATCTAACTATAAAAGAGGAAGGTGACATCAATTTCAAAGAGGAAGGAGAATAGAGATTTCAGTAACGGAGATTTTGAAAGCCTAATACTCATTGCGGTAGATATTGCACAAATTGAACTAGAGGCCGACGTGAAATAAAAGATCAACAACAAACCAATACTCTCAAAGATTTTGAAAATGGGAGTAGTCAATTGAGGAAAAAAACTAGTGCAAATAAGCTTTGTTTCTACCAATAGCCGATAGACGAGTAGAATCATGCTCTAAAATTGGAAAACTCTTCATAAATAAGTGAAAAAAGTAGCACAGAAGATGAGAAGTGAAAAAATAATAATAATAATAAAGCTCTATCCTAAAATTGAAAAACACTCTAACGAGTCTACTATAATTTTCTCCCTCAACCCTTTTTTTTAAAAAAAAATAACAAGTACATGAGAAACTTGTGGCATTTTGAATATGAGTTGGAACTCTTTTAAACGATGATTGAAGCATAAACTTAAATCGAGTATGTGAGTTGATACACTTATTTAAGTTTGAAGTTTAAATGAATTAAATCGAAAGTGTAGAGTAAAAATTGACACAATTTTATCGGGTGATTGTCTTGGCTATATAATAAGGAAATTTTTTTTAAACAATTTTTCTACACAAATTATTTTTTATAATAAAAAATTTAATAAAAATTCATCCAATTAATCATTTCTTTTTCATTCTTAATTAATTATAATAATTTTGTTCATAAATAAAAAAATTTTAAAAAAACTATGATATACTAATATATACATGCAGAAACACACATCACATCAGCTTTCTAGATGTTTTTCTTCAGGGACGTATAAAAGTAGCCCACAACCTAACTTTTTTAGCTTCCTCTTCTGAATTGTCTCGGATTAGAAAGATGTCCTTCTAGCTTTCGTTTATTTCCCTTGTTCTATAAGGGATTAATTCATTTCTGTTATTATTATTTTTATTTATTTTTTTATTTTATTTTTTTTTTTTTTTGAATAGAAAGACTTTCTAAATGTTGAACTCAATTTCACATTTTCAATTTCTAGAAATTCCAAGTTTGGTTATCACATTTGAATGATGTTTGCAGTGCGAGCAAATGATTAAACATCAAAATCTTTTGGATGCTTATGGAATGATTGAAGGATATCTCAATCTCTTGGTAGAAAGGATCAACCTCCTTGGACGTGGAAGGTTTTGTTTGCATTTTTATTTTATAATCATTTTTCATTTTCAAATCAATACGATTTCAACAACATTTTCTAGTCTTTTTTCATTTTTATCACATATTTTGTGAATAATGATTTTATTTTTTACGATAGTATCATTCATCGATTATATTGATTAAAATCAAATTGAAAAAAAAATATATTTTTAAAACAAAATTCAATTATAGCTTTCCATACCAAATATTTCAATTTTCATATTTATTGGAAAAAAAAAAAAAAAGAGAGGTTACTTTGGGTTTTTTCTACCTTTTATTTTGACAAAGGTTTTTTTTTTTTTTAATTTTACGAAGAGAATGCCCCGATGAATTGAAGGAGGCAGTGTCAAGTGTAGTATTTGCAGCTTCAAGATGGAAGGATTTTCCCGAACTTGAAGACATTAAATCAATATTGACTTCTCAATTTGGCAAAGAGTTCACTGGTCGTGCTGTTGAATTACGCAACAACAATAGTGTAAATGACTCGGTAAGAATCATTTTCTCATAACATTTTAGTTTCGTTTGATAACAATCTCGTTTTGAATTTTGTATTGGGTTGATATTTTTCATTATTATTTGATAGATAATGCAAAAACTATCAACAAGGAAGCCAAATATGGAGAGTAAAATGAATCTTCTTAGAGTCATTGCTTCTGAAAATGGTATTACTTTGCAATTCGACGAACAGGTAAGCCACCCTATAAGAATAACTAAAGAACGTACAAATATTATTATCCAAAAAATGAGCCAATAAATTTTAAAGCTCGCCAATCAATATTCTTTTTTTAATTTTAAATTATAATGAATCTCTAATATTAATCTTCGTGTCATTACTTTTTTTAAATTTTATTTATAAAATTTGCTATTTTATTCTTTATGTATTGCAGTTTTTTTTTTAATTAAGTATTTCCTGTCACTAAATATAAAAAGTAAGGTGGTTGTATTATCATATATTGAACAAAAAAGGTTGTCGTATGAATTTAAAAACAATTTTTGATAAAATAACAAATCATTCTAGGCACGTTACTAGCTTTATTAGAACACATGAAATGTTTGCTTCTTGTTGGCTAAATATATGTTATGGTTCTTGTAATTTGAATATATTTTTTTTAATTTAGCTTTTACTATTTAAAATGATTTATTCAAATTGATTCTTTTATGTGTTAAACATTTTTCAATTTAGTCTATCCTAGTTAGCTAAAGTTAGTTTACCATTCATTTATATGACTTACATGCAAGTATTATTACTCAATTTTATATTACTCACAGGTGAGGGATTAGTTGCAAATTACTTTAAAAAAAAAAAAAAAAAAAAAAAATGGGATTAAATTGAAGCAATAGGACTAAAATATATATTAAATTTTTTTTTTTAATTTTATGAGTGGATATTATAATTTTGTTTCATGAAATTAAAACATAAAATGCAATTTAGTAAAATGAGTCAAAATATTTATAAATATAGAAAAATTTCAATGTCTATCAGCTAACGTTGATAGACATTGAAATTTTTCTATAGTTGTAAATAATTTGATATTTTTTCTCGTTATAATAGTTTTCTTTTAGCTAATGTAATTTAGATTAAAATATTATTTTAGTGCTTGGGGTTCTATTTCATTCTAGCCCATATCCTTTGAAGTTAATTTTATTGAGAATAAAATAGATGTACGTGTGTGTATATAACTAGACACTAAGGCTAAATGATATATTTAGCCTATTACTAATCTATTCAATTGATTAGGAATTTAGATATTAATTAGAATGATCATACAAGTTATTTATTTTTATTCAATTAATTATTTAAATAATTCTTTTTTTTTTTTCCTTGAAACAGGGTGAGTTATCCAGTTCGATTCAAAATAGAAAACGAAGCAGACAACAAAACAAAGGTATGGGTTTGACCACAAGCTCATATCAAACCCGCAGCTCAAGTCGCAAACATAGACGT

mRNA sequence

TAAAGCTTGTGGATTTAAAATTCCAATCCGATTTAGAAAACAAAAGAATGAGAAGAATTTTGAATCCTCTTGTGGGAAGAAGTTTCAAGTCCTCTGGTTTCAGACGTTTGGTCCAATCTGCTTTCACGCGCCTTCAATCGCTGAAGAACTATCGCCATGGAAGATACTCCGAAGATCGCAACGACGTCGTTCGCCTCCTTCAAGATGGCCTTCCCAAACTTGCTCTCTCTCGTTGCGAGCAAATGATTAAACATCAAAATCTTTTGGATGCTTATGGAATGATTGAAGGATATCTCAATCTCTTGGTAGAAAGGATCAACCTCCTTGGACGTGGAAGAGAATGCCCCGATGAATTGAAGGAGGCAGTGTCAAGTGTAGTATTTGCAGCTTCAAGATGGAAGGATTTTCCCGAACTTGAAGACATTAAATCAATATTGACTTCTCAATTTGGCAAAGAGTTCACTGGTCGTGCTGTTGAATTACGCAACAACAATAGTGTAAATGACTCGATAATGCAAAAACTATCAACAAGGAAGCCAAATATGGAGAGTAAAATGAATCTTCTTAGAGTCATTGCTTCTGAAAATGGTATTACTTTGCAATTCGACGAACAGGGTGAGTTATCCAGTTCGATTCAAAATAGAAAACGAAGCAGACAACAAAACAAAGGTATGGGTTTGACCACAAGCTCATATCAAACCCGCAGCTCAAGTCGCAAACATAGACGT

Coding sequence (CDS)

ATGAGAAGAATTTTGAATCCTCTTGTGGGAAGAAGTTTCAAGTCCTCTGGTTTCAGACGTTTGGTCCAATCTGCTTTCACGCGCCTTCAATCGCTGAAGAACTATCGCCATGGAAGATACTCCGAAGATCGCAACGACGTCGTTCGCCTCCTTCAAGATGGCCTTCCCAAACTTGCTCTCTCTCGTTGCGAGCAAATGATTAAACATCAAAATCTTTTGGATGCTTATGGAATGATTGAAGGATATCTCAATCTCTTGGTAGAAAGGATCAACCTCCTTGGACGTGGAAGAGAATGCCCCGATGAATTGAAGGAGGCAGTGTCAAGTGTAGTATTTGCAGCTTCAAGATGGAAGGATTTTCCCGAACTTGAAGACATTAAATCAATATTGACTTCTCAATTTGGCAAAGAGTTCACTGGTCGTGCTGTTGAATTACGCAACAACAATAGTGTAAATGACTCGATAATGCAAAAACTATCAACAAGGAAGCCAAATATGGAGAGTAAAATGAATCTTCTTAGAGTCATTGCTTCTGAAAATGGTATTACTTTGCAATTCGACGAACAGGGTGAGTTATCCAGTTCGATTCAAAATAGAAAACGAAGCAGACAACAAAACAAAGGTATGGGTTTGACCACAAGCTCATATCAAACCCGCAGCTCAAGTCGCAAACATAGACGT

Protein sequence

MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLALSRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDFPELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASENGITLQFDEQGELSSSIQNRKRSRQQNKGMGLTTSSYQTRSSSRKHRR
Homology
[Close]
BLAST of ClCG08G005170 vs. Swiss-Prot
Match: IST1L_DICDI (IST1-like protein OS=Dictyostelium discoideum GN=DDB_G0289029 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 52/170 (30.59%), Postives = 88/170 (51.76%), Query Frame = 1 

Query: 10  GRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLALSRCEQMIKH 69
           G S+ S   +  ++ A +R+Q LKN +     +++ +V  LL+    + A  R E +I+ 
Sbjct: 5   GPSYDSYKLKVQLKLAVSRIQILKNKKANIVRDEKRNVAELLRKKNEESARIRVETIIRD 64

Query: 70  QNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDFPELEDIKSI 129
           + L++ + +IE    LL  RINL+    E P E+KE++ ++V+++ R +  PELE IK+ 
Sbjct: 65  EYLIECFQIIEVLCELLHARINLINATTEMPLEMKESIFTLVYSSQRIQ-IPELEQIKNQ 124

Query: 130 LTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASE 180
           L +++GK     A     +  VN  I+ KLS   P+       L  IA +
Sbjct: 125 LKAKYGKGLENEA-NCHCSTHVNPKIVHKLSYATPDPSIIFQTLSEIAEK 172

[Close]
BLAST of ClCG08G005170 vs. TrEMBL
Match: A0A0A0K949_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G031970 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.9e-83
Identity = 159/227 (70.04%), Postives = 196/227 (86.34%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           MR+I+  ++GRSF SS F+R VQS+FTRL+SL ++R  R+SED N+VV LLQ+ L +LAL
Sbjct: 1   MRKIMKRVLGRSFSSSCFKRSVQSSFTRLKSLTDHRRRRFSEDLNEVVSLLQEDLQELAL 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
           SRCEQMIKHQNL+DAYG+IEGYLNLL+ERI+LLGR RECPDELKEAVSSV+FAASRWKDF
Sbjct: 61  SRCEQMIKHQNLVDAYGLIEGYLNLLIERIHLLGRERECPDELKEAVSSVIFAASRWKDF 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
            EL D+KSI TSQFGKEFT RAVELRNNN VN SI+QKLS +KP+ +SKMNLL++IAS+ 
Sbjct: 121 TELGDVKSIFTSQFGKEFTARAVELRNNNRVNQSIIQKLSAKKPDTKSKMNLLKLIASDK 180

Query: 181 GITLQFDEQGELSSSIQNRKRSRQQNKGMGLTTSSYQTRSSSRKHRR 228
           GI ++ +E+G+LS SIQ RKR R++NK +  TTSSYQTR+SSR+ +R
Sbjct: 181 GIVVKLNEEGKLSKSIQIRKRGREKNKVVTATTSSYQTRNSSRRPKR 227

[Close]
BLAST of ClCG08G005170 vs. TrEMBL
Match: A0A0B2SE71_GLYSO (IST1-like protein OS=Glycine soja GN=glysoja_044795 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48
Identity = 105/207 (50.72%), Postives = 147/207 (71.01%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           M + L+ L+GR+FK S F+ +V  A +RL  LKN R  R    R+DV+ LLQ G  + A 
Sbjct: 1   MGKKLDALLGRTFKVSKFKAIVNLAISRLAVLKNQRQARLRHARSDVLELLQLGHQERAS 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
            R E +IK QN+LD YG IEGY NLL+ER++L+ + RECP+ELKEA S +++AASR  DF
Sbjct: 61  LRVEHVIKDQNMLDVYGRIEGYFNLLIERVHLIEQERECPEELKEAASGLLYAASRCGDF 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
           PE++ I+ ILTS+FGKEF  R++ELRNN  V+  ++QKLST+ P++ES+M +L+ IASEN
Sbjct: 121 PEIQQIRVILTSRFGKEFAARSIELRNNCGVHPQMIQKLSTKMPSLESRMKVLKDIASEN 180

Query: 181 GITLQFDEQGELSSSIQNRKRSRQQNK 208
           GI LQ +   E S S++ +    +QN+
Sbjct: 181 GIVLQLE---ETSVSVEEQSSVEKQNQ 204

[Close]
BLAST of ClCG08G005170 vs. TrEMBL
Match: C6TEJ2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G083000 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48
Identity = 105/207 (50.72%), Postives = 147/207 (71.01%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           M + L+ L+GR+FK S F+ +V  A +RL  LKN R  R    R+DV+ LLQ G  + A 
Sbjct: 1   MGKKLDALLGRTFKVSKFKAIVNLAISRLAVLKNQRQARLRHARSDVLELLQLGHQERAS 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
            R E +IK QN+LD YG IEGY NLL+ER++L+ + RECP+ELKEA S +++AASR  DF
Sbjct: 61  LRVEHVIKDQNMLDVYGRIEGYFNLLIERVHLIEQERECPEELKEAASGLLYAASRCGDF 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
           PE++ I+ ILTS+FGKEF  R++ELRNN  V+  ++QKLST+ P++ES+M +L+ IASEN
Sbjct: 121 PEIQQIRVILTSRFGKEFAARSIELRNNCGVHPQMIQKLSTKMPSLESRMKVLKDIASEN 180

Query: 181 GITLQFDEQGELSSSIQNRKRSRQQNK 208
           GI LQ +   E S S++ +    +QN+
Sbjct: 181 GIVLQLE---ETSVSVEEQSSVEKQNQ 204

[Close]
BLAST of ClCG08G005170 vs. TrEMBL
Match: C6TIN4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48
Identity = 103/210 (49.05%), Postives = 149/210 (70.95%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           M + L+ L+GR+FK++ F+ +V  A +RL  LKN R  R  + R+D++ LLQ G  + A 
Sbjct: 1   MGKKLDALLGRTFKAAKFKAIVNLAISRLAVLKNQRQARLRQARSDILELLQIGHLERAS 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
            R E ++K QN+LD Y  IEGY NLL+ER++L+ + RECP+ELKEA S +++AASR  DF
Sbjct: 61  LRVEHVMKDQNMLDVYVRIEGYCNLLIERVHLIAQERECPEELKEAASGLLYAASRCGDF 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
           PE+++I++ILTS+FGKEF  R++ELRNN  V+  + QKLSTR P++ES+M +L+ IASEN
Sbjct: 121 PEIQEIRAILTSRFGKEFAARSIELRNNCGVHPQMTQKLSTRMPSLESRMKVLKDIASEN 180

Query: 181 GITLQFDEQG---ELSSSIQNRKRSRQQNK 208
           GI LQ +E     E  SS++ + R   + K
Sbjct: 181 GIVLQLEETSVSVEEQSSVEKQNRHESEKK 210

[Close]
BLAST of ClCG08G005170 vs. TrEMBL
Match: A0A151QR33_CAJCA (IST1-like protein OS=Cajanus cajan GN=KK1_046528 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.9e-48
Identity = 104/206 (50.49%), Postives = 145/206 (70.39%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           M + L+ L+GR+FK+S F+  V  A +R+  LKN RH R    R+DV+ LLQ G  + A 
Sbjct: 1   MGKKLDALLGRTFKASKFKATVNLATSRIAVLKNQRHARLRHARSDVLELLQLGHQERAS 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
            R E +IK QN+LD Y MIEGY NLL+ER++L+ + RECP+ELKEA S +++AASR  DF
Sbjct: 61  LRAEHVIKDQNMLDVYDMIEGYCNLLIERVHLIEQERECPEELKEAASGLLYAASRCGDF 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
           PE+++I+ +LT++FGKEF  RA+ELRNN  V+  I+QK+STR P++E +M  L+ IASEN
Sbjct: 121 PEIQEIRGVLTTRFGKEFAARAIELRNNCGVHPQIIQKMSTRMPSLEIRMKALKDIASEN 180

Query: 181 GITLQFDEQGELSSSIQNRKRSRQQN 207
           GI LQ +   E S S++      +QN
Sbjct: 181 GIVLQLE---ETSVSVEEHFNLEKQN 203

[Close]
BLAST of ClCG08G005170 vs. TAIR10
Match: AT1G13340.1 (AT1G13340.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 170.2 bits (430), Expect = 1.4e-42
Identity = 90/207 (43.48%), Postives = 131/207 (63.29%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           M + L+ L+GRSFK++ F+ L+  A TRL  LKN R  R S+  +DV  LL+ G  + A 
Sbjct: 1   MGKKLDALLGRSFKTNKFKSLITLALTRLSILKNQRQARLSQAISDVTELLKLGQHEHAY 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
            R +Q++K QN LD    I GY  L ++RI+L    R+CP+EL EAVS ++FAASR  +F
Sbjct: 61  HRVDQVVKDQNTLDVLFFIHGYFTLCLDRIHLFEHNRDCPEELLEAVSGLLFAASRIGEF 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
           PEL++I+++L S+FGK+   R++ELR+N  V+  I+QKLSTR P  E +M  L+ IA+EN
Sbjct: 121 PELQEIRNVLISRFGKDLAARSIELRSNCGVDPKIIQKLSTRPPPKEVRMKALKEIAAEN 180

Query: 181 GITLQFDEQGELSSSIQNRKRSRQQNK 208
            I L+ D+    +    N + +   +K
Sbjct: 181 NIVLKLDQASTSTEGTTNMQGTSDVSK 207

[Close]
BLAST of ClCG08G005170 vs. TAIR10
Match: AT2G19710.1 (AT2G19710.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 118.6 bits (296), Expect = 4.9e-27
Identity = 68/213 (31.92%), Postives = 119/213 (55.87%), Query Frame = 1 

Query: 5   LNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLALSRCE 64
           +  ++ R FK +  +  +Q A +RL+ LKN +  +  + R ++ +LL+ G    A  R E
Sbjct: 1   MKKVLQRGFKPAKCKTALQMANSRLKILKNKKEIQIKQLRRELAQLLESGQTPTARIRVE 60

Query: 65  QMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDFPELE 124
            +++ +  + AY +I  Y  LLV R+ ++   + CP +LKEAV+SV+FA+ R  D PEL 
Sbjct: 61  HVVREEKTVAAYELIGIYCELLVVRLGVIESQKNCPIDLKEAVTSVLFASQRLSDVPELS 120

Query: 125 DIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASENGITL 184
           +I    T+++GK+F+  AVELR ++ V+  +++KLS + P+  +K+ +L  IA E+ +  
Sbjct: 121 EIFKQFTTKYGKDFSTSAVELRPDSGVSRLLVEKLSAKAPDGPTKVKILMAIAEEHNVVW 180

Query: 185 Q---FDEQGELSSSIQNRKRSRQQNKGMGLTTS 215
           +   F E     + + N   S Q    M + +S
Sbjct: 181 EAQSFVESDPKDTELLNGANSFQPASSMNMDSS 213

[Close]
BLAST of ClCG08G005170 vs. TAIR10
Match: AT4G35730.1 (AT4G35730.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 115.2 bits (287), Expect = 5.4e-26
Identity = 60/172 (34.88%), Postives = 98/172 (56.98%), Query Frame = 1 

Query: 8   LVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLALSRCEQMI 67
           L  R F SS  +   + A  R++ ++N R     + R D+  LLQ G    A  R E +I
Sbjct: 21  LFRRGFNSSKCKTAAKMAVARIKLIRNKRLVVVKQMRRDIAVLLQSGQDATARIRVEHVI 80

Query: 68  KHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDFPELEDIK 127
           + QN+  A  +IE +  L+V R+ ++ + ++CP +LKE ++S++FAA R  + PEL D++
Sbjct: 81  REQNIQAANEIIELFCELIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCSEIPELGDLR 140

Query: 128 SILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASE 180
            I   ++GK+F   A +LR +  VN  ++ KLS R P  E K+ +++ IA E
Sbjct: 141 DIFAKKYGKDFVSAATDLRPSCGVNRMLIDKLSVRNPGGEYKLKIMKEIAKE 192

[Close]
BLAST of ClCG08G005170 vs. TAIR10
Match: AT4G29440.1 (AT4G29440.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 111.7 bits (278), Expect = 6.0e-25
Identity = 65/226 (28.76%), Postives = 123/226 (54.42%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           M+++L+    RSFK +  +  +Q A +RL+ LKN +  +  + R ++  LL+ G  + A 
Sbjct: 1   MKKVLH----RSFKPAKCKIALQMAASRLKILKNKKDTQIKQLRRELAHLLESGQTQTAK 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
            R E +++ +  + AY ++  Y  LLV R+ ++   + CP++LKEAV+SV++A+ R  D 
Sbjct: 61  IRVEHVVREEKTVAAYELVGIYCELLVARLGVIDSQKTCPNDLKEAVASVLYASQRLTDV 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
            EL DI    ++++GK+F   A+ L+ ++ V+  +++KLS + P+  +K+ +L  IA+++
Sbjct: 121 GELSDIVKHFSAKYGKDFVSAAIGLQPDSGVSRLLVEKLSVKAPDGPTKIKILTEIATQH 180

Query: 181 GITLQFDEQGELSSSIQNRKRSRQQNKGMGLTTSSYQTRSSSRKHR 227
            +T       E  S +++  +      G   + S   T   S   R
Sbjct: 181 NVT------WEAESLVESDPKETMSASGASSSVSQPATGIKSESSR 216

[Close]
BLAST of ClCG08G005170 vs. TAIR10
Match: AT1G25420.1 (AT1G25420.1 Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 58/176 (32.95%), Postives = 101/176 (57.39%), Query Frame = 1 

Query: 4   ILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLALSRC 63
           +LN L  R    +  +  +  A  R++ L+N R  +    + ++   LQ G   +A  R 
Sbjct: 3   LLNQLFNRGIFGAKCKTSLNLAIARMKLLQNKRDMQLKHMKKEIAHFLQAGQEPIARIRV 62

Query: 64  EQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDFPEL 123
           E +I+  NL  AY ++E +   ++ R+ +L   +ECP EL+EA++S++FAA R  + P+L
Sbjct: 63  EHVIREMNLWAAYEILELFCEFILARVPILESEKECPRELREAIASIIFAAPRCSEVPDL 122

Query: 124 EDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASE 180
             IK++  +++GKEF   A ELR ++ VN +I++KLS   P+  +++ +L+ IA E
Sbjct: 123 LQIKNLFGTKYGKEFIMVASELRPDSGVNRTIIEKLSPTSPSGAARLKMLKEIAQE 178

[Close]
BLAST of ClCG08G005170 vs. NCBI nr
Match: gi|659089696|ref|XP_008445649.1| (PREDICTED: uncharacterized protein LOC103488605 [Cucumis melo])

HSP 1 Score: 341.3 bits (874), Expect = 1.3e-90
Identity = 176/227 (77.53%), Postives = 199/227 (87.67%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           MRRILN +VGRSF+SSGF+RLVQS+FTRLQSL ++R  RYSED NDV+ LLQDGL KLAL
Sbjct: 1   MRRILNRVVGRSFRSSGFKRLVQSSFTRLQSLTDHRRRRYSEDLNDVLSLLQDGLHKLAL 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
           SRCEQMIKHQNLLDAYG+IEGYLNLL+ERI LLGR RECPDELKEA SSVVFAASRWKDF
Sbjct: 61  SRCEQMIKHQNLLDAYGLIEGYLNLLMERIQLLGRARECPDELKEAASSVVFAASRWKDF 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
            EL DIKSI TSQFGKEFT  AVELRNNN VN SI+QKLST+KP+M+SKMNLL++IAS+ 
Sbjct: 121 TELGDIKSIFTSQFGKEFTAPAVELRNNNRVNQSIIQKLSTKKPDMKSKMNLLKLIASDK 180

Query: 181 GITLQFDEQGELSSSIQNRKRSRQQNKGMGLTTSSYQTRSSSRKHRR 228
           GI +Q ++QGE   SIQ RKRSR+QN+ +  TTSSYQTR+SSRK RR
Sbjct: 181 GIVVQLNDQGEPFGSIQTRKRSREQNEVVIATTSSYQTRNSSRKLRR 227

[Close]
BLAST of ClCG08G005170 vs. NCBI nr
Match: gi|778710094|ref|XP_011656518.1| (PREDICTED: uncharacterized protein LOC101210797 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 2.7e-83
Identity = 159/227 (70.04%), Postives = 196/227 (86.34%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           MR+I+  ++GRSF SS F+R VQS+FTRL+SL ++R  R+SED N+VV LLQ+ L +LAL
Sbjct: 1   MRKIMKRVLGRSFSSSCFKRSVQSSFTRLKSLTDHRRRRFSEDLNEVVSLLQEDLQELAL 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
           SRCEQMIKHQNL+DAYG+IEGYLNLL+ERI+LLGR RECPDELKEAVSSV+FAASRWKDF
Sbjct: 61  SRCEQMIKHQNLVDAYGLIEGYLNLLIERIHLLGRERECPDELKEAVSSVIFAASRWKDF 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
            EL D+KSI TSQFGKEFT RAVELRNNN VN SI+QKLS +KP+ +SKMNLL++IAS+ 
Sbjct: 121 TELGDVKSIFTSQFGKEFTARAVELRNNNRVNQSIIQKLSAKKPDTKSKMNLLKLIASDK 180

Query: 181 GITLQFDEQGELSSSIQNRKRSRQQNKGMGLTTSSYQTRSSSRKHRR 228
           GI ++ +E+G+LS SIQ RKR R++NK +  TTSSYQTR+SSR+ +R
Sbjct: 181 GIVVKLNEEGKLSKSIQIRKRGREKNKVVTATTSSYQTRNSSRRPKR 227

[Close]
BLAST of ClCG08G005170 vs. NCBI nr
Match: gi|659089698|ref|XP_008445650.1| (PREDICTED: uncharacterized protein LOC103488606 [Cucumis melo])

HSP 1 Score: 206.8 bits (525), Expect = 3.9e-50
Identity = 118/225 (52.44%), Postives = 160/225 (71.11%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           M R L+ L+GR+F++S FR L+  + +RL  L + R  R S+  +DV++LLQ      AL
Sbjct: 1   MGRKLDALLGRNFRASKFRPLLNLSLSRLSILTSQRRLRCSQANSDVLQLLQLSHHHRAL 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
            R E++IK QN LDAY +IEGYLNLL+ER  LL +  ECP+ELKEAV+ ++FAASR  DF
Sbjct: 61  LRVEKVIKDQNALDAYVLIEGYLNLLLERTTLLEQQSECPEELKEAVAGLLFAASRCGDF 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
           PEL +IKS+LT++FGKEFT RAVELRNN  VN S+MQKLSTR+P +E++M +L+ IASEN
Sbjct: 121 PELHEIKSVLTTRFGKEFTARAVELRNNCGVNLSLMQKLSTRQPTLETRMEVLKSIASEN 180

Query: 181 GITLQFDEQGELSSSIQNRKRSRQQNKGMGLTTS-SYQTRSSSRK 225
           GI LQFD+     S+ +   RS +Q++  G +   S +  S S+K
Sbjct: 181 GIVLQFDQLPH--SNEEKVARSGRQSEAEGRSEKFSNEVASDSKK 223

[Close]
BLAST of ClCG08G005170 vs. NCBI nr
Match: gi|719967967|ref|XP_010263421.1| (PREDICTED: uncharacterized protein LOC104601677 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 206.8 bits (525), Expect = 3.9e-50
Identity = 109/207 (52.66%), Postives = 152/207 (73.43%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           M + L+ L+GR+FK+S F+ LV  A +RL  LKN R  R S+ R+DVV LL  G  + AL
Sbjct: 1   MGKKLDALLGRTFKASKFKALVNLAISRLAVLKNQREVRGSQARSDVVHLLNLGHHERAL 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
            R EQ+IK QN+L+ + MIEGY +LL+ER+ L+   ++CPDELKEA+SS++FAASR  +F
Sbjct: 61  LRVEQVIKEQNMLNVFVMIEGYCHLLMERVVLIENNKQCPDELKEAISSLIFAASRCGEF 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
           PEL+++++I TS+FGKEF  RAVELRNN  VN  I+QK+STR+PN+ES+  +L+ IASEN
Sbjct: 121 PELQELRAIFTSRFGKEFAARAVELRNNCQVNPKIIQKMSTRQPNLESRSKVLKEIASEN 180

Query: 181 GITLQFDEQGELSSSIQNRKRSRQQNK 208
           GI+L  +   E+SS    ++R  Q+ K
Sbjct: 181 GISLHLE---EVSSDTNKQERMDQEQK 204

[Close]
BLAST of ClCG08G005170 vs. NCBI nr
Match: gi|719967970|ref|XP_010263425.1| (PREDICTED: uncharacterized protein LOC104601677 isoform X2 [Nelumbo nucifera])

HSP 1 Score: 203.0 bits (515), Expect = 5.6e-49
Identity = 105/201 (52.24%), Postives = 147/201 (73.13%), Query Frame = 1 

Query: 1   MRRILNPLVGRSFKSSGFRRLVQSAFTRLQSLKNYRHGRYSEDRNDVVRLLQDGLPKLAL 60
           M + L+ L+GR+FK+S F+ LV  A +RL  LKN R  R S+ R+DVV LL  G  + AL
Sbjct: 1   MGKKLDALLGRTFKASKFKALVNLAISRLAVLKNQREVRGSQARSDVVHLLNLGHHERAL 60

Query: 61  SRCEQMIKHQNLLDAYGMIEGYLNLLVERINLLGRGRECPDELKEAVSSVVFAASRWKDF 120
            R EQ+IK QN+L+ + MIEGY +LL+ER+ L+   ++CPDELKEA+SS++FAASR  +F
Sbjct: 61  LRVEQVIKEQNMLNVFVMIEGYCHLLMERVVLIENNKQCPDELKEAISSLIFAASRCGEF 120

Query: 121 PELEDIKSILTSQFGKEFTGRAVELRNNNSVNDSIMQKLSTRKPNMESKMNLLRVIASEN 180
           PEL+++++I TS+FGKEF  RAVELRNN  VN  I+QK+STR+PN+ES+  +L+ IASEN
Sbjct: 121 PELQELRAIFTSRFGKEFAARAVELRNNCQVNPKIIQKMSTRQPNLESRSKVLKEIASEN 180

Query: 181 GITLQFDEQGELSSSIQNRKR 202
           GI+L  +++       QN  +
Sbjct: 181 GISLHLEQERMDQEQKQNHHK 201

The following BLAST results are available for this feature:
BLAST of ClCG08G005170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IST1L_DICDI1.1e-1230.59IST1-like protein OS=Dictyostelium discoideum GN=DDB_G0289029 PE=3 SV=1[more]
BLAST of ClCG08G005170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K949_CUCSA1.9e-8370.04Uncharacterized protein OS=Cucumis sativus GN=Csa_6G031970 PE=4 SV=1[more]
A0A0B2SE71_GLYSO1.1e-4850.72IST1-like protein OS=Glycine soja GN=glysoja_044795 PE=4 SV=1[more]
C6TEJ2_SOYBN1.1e-4850.72Uncharacterized protein OS=Glycine max GN=GLYMA_01G083000 PE=2 SV=1[more]
C6TIN4_SOYBN1.1e-4849.05Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
A0A151QR33_CAJCA1.9e-4850.49IST1-like protein OS=Cajanus cajan GN=KK1_046528 PE=4 SV=1[more]
BLAST of ClCG08G005170 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13340.11.4e-4243.48 Regulator of Vps4 activity in the MVB pathway protein[more]
AT2G19710.14.9e-2731.92 Regulator of Vps4 activity in the MVB pathway protein[more]
AT4G35730.15.4e-2634.88 Regulator of Vps4 activity in the MVB pathway protein[more]
AT4G29440.16.0e-2528.76 Regulator of Vps4 activity in the MVB pathway protein[more]
AT1G25420.11.3e-2432.95 Regulator of Vps4 activity in the MVB pathway protein[more]
BLAST of ClCG08G005170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089696|ref|XP_008445649.1|1.3e-9077.53PREDICTED: uncharacterized protein LOC103488605 [Cucumis melo][more]
gi|778710094|ref|XP_011656518.1|2.7e-8370.04PREDICTED: uncharacterized protein LOC101210797 [Cucumis sativus][more]
gi|659089698|ref|XP_008445650.1|3.9e-5052.44PREDICTED: uncharacterized protein LOC103488606 [Cucumis melo][more]
gi|719967967|ref|XP_010263421.1|3.9e-5052.66PREDICTED: uncharacterized protein LOC104601677 isoform X1 [Nelumbo nucifera][more]
gi|719967970|ref|XP_010263425.1|5.6e-4952.24PREDICTED: uncharacterized protein LOC104601677 isoform X2 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005061Ist1
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0015031 protein transport
biological_process GO:0050789 regulation of biological process
biological_process GO:0044763 single-organism cellular process
biological_process GO:0006950 response to stress
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G005170.1ClCG08G005170.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005061Vacuolar protein sorting-associated protein Ist1PANTHERPTHR12161UNCHARACTERIZED DUF292coord: 3..207
score: 3.0
IPR005061Vacuolar protein sorting-associated protein Ist1PFAMPF03398Ist1coord: 21..182
score: 2.8
NoneNo IPR availablePANTHERPTHR12161:SF16SUBFAMILY NOT NAMEDcoord: 3..207
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG08G005170Csa5G608550Cucumber (Chinese Long) v2cuwcgB412
ClCG08G005170Csa6G031970Cucumber (Chinese Long) v2cuwcgB499
ClCG08G005170MELO3C011553Melon (DHL92) v3.5.1mewcgB302
ClCG08G005170MELO3C012232Melon (DHL92) v3.5.1mewcgB074
ClCG08G005170Cla020384Watermelon (97103) v1wcgwmB417
ClCG08G005170Cla007984Watermelon (97103) v1wcgwmB402
ClCG08G005170Cla97C05G104720Watermelon (97103) v2wcgwmbB333
ClCG08G005170Cla97C08G148010Watermelon (97103) v2wcgwmbB336
ClCG08G005170Bhi04G001572Wax gourdwcgwgoB632
ClCG08G005170Bhi07G001121Wax gourdwcgwgoB650
ClCG08G005170CSPI05G25130Wild cucumber (PI 183967)cpiwcgB430
ClCG08G005170CSPI06G03110Wild cucumber (PI 183967)cpiwcgB524
ClCG08G005170Cucsa.283710Cucumber (Gy14) v1cgywcgB502
ClCG08G005170Cucsa.365390Cucumber (Gy14) v1cgywcgB624
ClCG08G005170CmaCh04G020570Cucurbita maxima (Rimu)cmawcgB682
ClCG08G005170CmoCh04G021540Cucurbita moschata (Rifu)cmowcgB684
ClCG08G005170Lsi08G003970Bottle gourd (USVL1VR-Ls)lsiwcgB439
ClCG08G005170Cp4.1LG01g17940Cucurbita pepo (Zucchini)cpewcgB420
ClCG08G005170CsGy6G003180Cucumber (Gy14) v2cgybwcgB458
ClCG08G005170CsGy5G024600Cucumber (Gy14) v2cgybwcgB378
ClCG08G005170MELO3C011553.2Melon (DHL92) v3.6.1medwcgB296
ClCG08G005170Carg27337Silver-seed gourdcarwcgB0469
ClCG08G005170CsaV3_5G034180Cucumber (Chinese Long) v3cucwcgB432
ClCG08G005170CsaV3_6G003380Cucumber (Chinese Long) v3cucwcgB517
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
ClCG08G005170ClCG05G022850Watermelon (Charleston Gray)wcgwcgB172
The following block(s) are covering this gene:
GeneOrganismBlock
ClCG08G005170Cucurbita maxima (Rimu)cmawcgB275
ClCG08G005170Cucurbita moschata (Rifu)cmowcgB267
ClCG08G005170Cucurbita pepo (Zucchini)cpewcgB182
ClCG08G005170Melon (DHL92) v3.6.1medwcgB071
ClCG08G005170Silver-seed gourdcarwcgB0818
ClCG08G005170Silver-seed gourdcarwcgB0927