ClCG08G004690 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG08G004690
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	RING zinc finger protein-like
Location	CG_Chr08 : 14815779 .. 14816576 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTAACAAGCAGTTCCCGAAAATCGTCTCATACTGCCACAGAGTGTTCGGATGACGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGTCCAATATGTTGGGAATCCTTCAACATTGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTCCAGCTTCCACTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTAGAGAACATAAACGTCGAAAGAGTTAAATCCCATTCTGCATTCTCTGGGGATCAACTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAATCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCACTTGACAGCCAAGTTTCCATTGGTGATCATCTTCCTCCTGATCGTCTTATATGCTGTGCCTGCCAGTGCAGCAATCTTGGCTCTGTACGTACTAGTCACGGTCCTTTTTGCTCTCCCATCGTTTCTCATATTGTATTTTGCTTACCCTAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAA

mRNA sequence

ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTAACAAGCAGTTCCCGAAAATCGTCTCATACTGCCACAGAGTGTTCGGATGACGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGTCCAATATGTTGGGAATCCTTCAACATTGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTCCAGCTTCCACTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTAGAGAACATAAACGTCGAAAGAGTTAAATCCCATTCTGCATTCTCTGGGGATCAACTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAATCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCACTTGACAGCCAAGTTTCCATTGGTGATCATCTTCCTCCTGATCGTCTTATATGCTGTGCCTGCCAGTGCAGCAATCTTGGCTCTGTACGTACTAGTCACGGTCCTTTTTGCTCTCCCATCGTTTCTCATATTGTATTTTGCTTACCCTAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAA

Coding sequence (CDS)

ATGTGGAATTTTGCTTCCAACTGTGTGGCTGGATGTGCTGGACTAACAAGCAGTTCCCGAAAATCGTCTCATACTGCCACAGAGTGTTCGGATGACGAGCTATCTTCAGATGGTAGGGAGGAAGTGCTAGAGTGTCCAATATGTTGGGAATCCTTCAACATTGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACACTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTTCCGACATTACCGGTCCAGCTTCCACTTTTTATATCTTGCCCCTGGTGCAACCTCTTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTAGAGAACATAAACGTCGAAAGAGTTAAATCCCATTCTGCATTCTCTGGGGATCAACTAGTCTTTCCAGTGAGCGGTACTTCATCCAGGGGTAATCAAGTCAGTCACAATAACCTTAGGAGGGGACACCATGTTCGTCAATTAGATTCACAAGGACCAAACAATGCCAATAGCCATTTCCATAGCTTCAATCTGGAGAGGCTTCAATCTTCTCTCCGCAAATTGCTTGTTTTCTTTGTTCACTTGACAGCCAAGTTTCCATTGGTGATCATCTTCCTCCTGATCGTCTTATATGCTGTGCCTGCCAGTGCAGCAATCTTGGCTCTGTACGTACTAGTCACGGTCCTTTTTGCTCTCCCATCGTTTCTCATATTGTATTTTGCTTACCCTAGTCTGGATTGGTTGATGAGGGAGATCATCACTTAA

Protein sequence

MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYFLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVLFALPSFLILYFAYPSLDWLMREIIT

Homology

[Close]

BLAST of ClCG08G004690 vs. Swiss-Prot
Match: TRI32_MOUSE (E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus GN=Trim32 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 9.0e-06
Identity = 26/78 (33.33%), Postives = 38/78 (48.72%), Query Frame = 1


Query: 26  ATECSDDELSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPT 85
           A   +   L+ D   EVLECPIC ESF   +  P +L CGHT+C+ C+  L  + +    
Sbjct: 2   AAAAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--- 61

Query: 86  LPVQLPLFISCPWCNLLS 104
                   + CP+C+ ++
Sbjct: 62  -------GVRCPFCSKIT 69

[Close]

BLAST of ClCG08G004690 vs. TrEMBL
Match: A0A0A0K8G4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042350 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 9.9e-153
Identity = 264/265 (99.62%), Postives = 264/265 (99.62%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGL SSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]

BLAST of ClCG08G004690 vs. TrEMBL
Match: M5WTL5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010047mg PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.1e-110
Identity = 195/267 (73.03%), Postives = 229/267 (85.77%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSD-GREEVLECPICWESFNIVENVP 60
           MWNFAS+C+AG  GL + S + +  A+ECSDDE SS  GREE LECPICWESFNIVENVP
Sbjct: 1   MWNFASSCIAGSVGLKNDSLRPTQAASECSDDEGSSVVGREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE++N +R+KSHS FSGD   V+P +G +S G+QVSH + RR HH+R ++  G N
Sbjct: 121 FLLWMVESMNGDRIKSHSTFSGDNHAVWPANGNASVGSQVSHTHHRRVHHIRHIEPSGQN 180

Query: 181 NANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVT 240
           + + + +  ++ERL SSLRK L FFVHLTAKFPLV+IFLLI+LY +PA AAILALY+LVT
Sbjct: 181 HVHVN-NYLSVERLHSSLRKSLFFFVHLTAKFPLVVIFLLIILYVIPACAAILALYILVT 240

Query: 241 VLFALPSFLILYFAYPSLDWLMREIIT 266
           V+FALPSFL+LYFAYPSLDWL+REIIT
Sbjct: 241 VVFALPSFLLLYFAYPSLDWLVREIIT 266

[Close]

BLAST of ClCG08G004690 vs. TrEMBL
Match: A0A0B2PHT9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032019 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 8.2e-107
Identity = 197/268 (73.51%), Postives = 217/268 (80.97%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNC+AG  GL + S K +H+A+ECSDDE S  GREE LECPICWESFNIVENVP+
Sbjct: 1   MWNFASNCIAGTVGLKNDS-KPTHSASECSDDENSVIGREEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVY+GNLKFP KNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRG---HHVRQLDSQGP 180
           LLWMVE++N +R KSHS F GD     +    + G+QVSH NLRRG   H      +Q  
Sbjct: 121 LLWMVESMNGDRGKSHSPFCGDNQQHSIKDNLTMGSQVSHGNLRRGLVRHPETSSSNQYH 180

Query: 181 NNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLV 240
            N  +H    N ER    LRK L+FFV LTAKFPLVIIFLLIVLYA+PASAAILALYVLV
Sbjct: 181 GNTGNH---LNTERFHVYLRKSLIFFVQLTAKFPLVIIFLLIVLYAIPASAAILALYVLV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           T+LFALPSFLILYF+YPSLDWL+REIIT
Sbjct: 241 TILFALPSFLILYFSYPSLDWLVREIIT 264

[Close]

BLAST of ClCG08G004690 vs. TrEMBL
Match: C6TIH4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G059100 PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 8.2e-107
Identity = 197/268 (73.51%), Postives = 217/268 (80.97%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNC+AG  GL + S K +H+A+ECSDDE S  GREE LECPICWESFNIVENVP+
Sbjct: 1   MWNFASNCIAGTVGLKNDS-KPTHSASECSDDENSVIGREEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVY+GNLKFP KNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRG---HHVRQLDSQGP 180
           LLWMVE++N +R KSHS F GD     +    + G+QVSH NLRRG   H      +Q  
Sbjct: 121 LLWMVESMNGDRGKSHSPFCGDNQQHSIKDNLTMGSQVSHGNLRRGLVRHPETSSSNQYH 180

Query: 181 NNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLV 240
            N  +H    N ER    LRK L+FFV LTAKFPLVIIFLLIVLYA+PASAAILALYVLV
Sbjct: 181 GNTGNH---LNTERFHVYLRKSLIFFVQLTAKFPLVIIFLLIVLYAIPASAAILALYVLV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           T+LFALPSFLILYF+YPSLDWL+REIIT
Sbjct: 241 TILFALPSFLILYFSYPSLDWLVREIIT 264

[Close]

BLAST of ClCG08G004690 vs. TrEMBL
Match: V4UXG8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012457mg PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.4e-106
Identity = 197/272 (72.43%), Postives = 225/272 (82.72%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSD-GREEVLECPICWESFNIVENVP 60
           MWNFAS C+AG  GL + S K+S  A+ECSDD++SS   REE LECPICWESFN+VENVP
Sbjct: 1   MWNFASTCLAGNVGLKNDSLKASEAASECSDDDVSSVVSREESLECPICWESFNMVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFR+VYKGNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRVVYKGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRG-HHVRQLDSQGP 180
           FLLWMVE++N +RVKSHS F  D Q     SG+S+ GNQ++  N RRG HH        P
Sbjct: 121 FLLWMVESMNGDRVKSHSGFCEDRQPASSSSGSSTFGNQLNRGNHRRGQHHHHYHHHPEP 180

Query: 181 NNAN-SHFHSFN---LERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILAL 240
             +N  H H+ N   +ER+ SSLRK L+FFVHLTAKFPLV+IFLLIV+YA+PASAAILAL
Sbjct: 181 AGSNRDHLHATNYLTVERIHSSLRKSLIFFVHLTAKFPLVVIFLLIVVYAIPASAAILAL 240

Query: 241 YVLVTVLFALPSFLILYFAYPSLDWLMREIIT 266
           Y+LVT+LFALPSFLILYFAYPSLDWL+REI+T
Sbjct: 241 YILVTILFALPSFLILYFAYPSLDWLVREIVT 272

[Close]

BLAST of ClCG08G004690 vs. TAIR10
Match: AT3G29270.1 (AT3G29270.1 RING/U-box superfamily protein)

HSP 1 Score: 325.1 bits (832), Expect = 4.0e-89
Identity = 162/266 (60.90%), Postives = 192/266 (72.18%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSDG-REEVLECPICWESFNIVENVP 60
           MWN AS+ + G  G  +  R+  H   ECSDD++SS G ++E LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFRLV++G L+FP KNY
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNN 180
           F+LWMVE +N ER  S      D       G +    +     L   HH     SQ   +
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTD-------GNNDHTRETPSPCLHNRHH----RSQPEPS 188

Query: 181 ANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTV 240
            + + H    + +Q+SLRK LVFFV LTAKFPLV+IFLLI+LYA+P SAAILA+Y+LVT+
Sbjct: 189 RSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTL 248

Query: 241 LFALPSFLILYFAYPSLDWLMREIIT 266
           L ALPSFLILYFAYP LDWL+REI+T
Sbjct: 249 LLALPSFLILYFAYPCLDWLVREIVT 263

[Close]

BLAST of ClCG08G004690 vs. TAIR10
Match: AT1G69330.1 (AT1G69330.1 RING/U-box superfamily protein)

HSP 1 Score: 275.0 bits (702), Expect = 4.8e-74
Identity = 147/271 (54.24%), Postives = 184/271 (67.90%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSDGR-EEVLECPICWESFNIVENVP 60
           MW FASN V G  GL  S + S+  +++CSDDE+S+  R EE LECPICWESFNIVENVP
Sbjct: 1   MWGFASN-VIGSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLC+NC+ GLQ AV++  +  +++P F+SCPWC LLSFR+VYKGNLKFP KN+
Sbjct: 61  YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 120

Query: 121 FLLWMVENINVERVK-----SH-SAFSGDQLVFPVSGTS-SRGNQVSHNNLRRGHHVRQL 180
           FLLWMVE++N +R       SH S  + +Q   P    S S GN  S+NNL     +R  
Sbjct: 121 FLLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTPRCSMSLGNHSSNNNLVARPLLR-- 180

Query: 181 DSQGPNNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILA 240
            +Q  +    H HS    R   S  K L FF+  T+KFP VIIFLLIV +A+P S  ILA
Sbjct: 181 -NQSTDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILA 240

Query: 241 LYVLVTVLFALPSFLILYFAYPSLDWLMREI 264
           LY L+T+LFA+P+ L+LYFAYP L+ L+ EI
Sbjct: 241 LYFLLTILFAVPAGLVLYFAYPILERLVNEI 267

[Close]

BLAST of ClCG08G004690 vs. TAIR10
Match: AT1G74370.1 (AT1G74370.1 RING/U-box superfamily protein)

HSP 1 Score: 241.5 bits (615), Expect = 5.9e-64
Identity = 130/275 (47.27%), Postives = 165/275 (60.00%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSDGR----EEVLECPICWESFNIVE 60
           MWN AS  +    G  S   +++      + D  S DGR    EE LECPICWESFN+VE
Sbjct: 1   MWNLASKSIR--EGFISKGEEAATKPRRATLDR-SGDGRKTTKEEKLECPICWESFNVVE 60

Query: 61  NVPHVLWCGHTLCKNCILGLQWAVV-KFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFP 120
           NVP+VLWCGHT+CK C+LGLQ A+V K   LP QLP F++CPWCN+LS RLV  G ++FP
Sbjct: 61  NVPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFP 120

Query: 121 CKNYFLLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQ 180
            KN++LLWMVE++N  R ++           P         Q    N   G     L  +
Sbjct: 121 SKNFYLLWMVESMNGSRSEA-----------PSDNKRVASGQRDLRNRCDGVSNTALGDE 180

Query: 181 GPNNANSHFHS-----FNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAI 240
           G  +  S ++      F   RL  S+RK +    HL AKFPLV+IFLL+ LYA+P SAA+
Sbjct: 181 GLLDNRSWWNGVTRGFFRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAV 240

Query: 241 LALYVLVTVLFALPSFLILYFAYPSLDWLMREIIT 266
           L +Y  VT   A+PSFL+LYFA+PSL+WL+REI T
Sbjct: 241 LGVYFFVTFALAVPSFLVLYFAFPSLNWLIREIAT 261

[Close]

BLAST of ClCG08G004690 vs. TAIR10
Match: AT1G21651.1 (AT1G21651.1 zinc ion binding)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 23/59 (38.98%), Postives = 29/59 (49.15%), Query Frame = 1


Query: 44  ECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
           ECP+C +S++    VP VL CGHT C+ C+            LP + P  I CP C +L
Sbjct: 5   ECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACTVL 53

[Close]

BLAST of ClCG08G004690 vs. TAIR10
Match: AT1G21650.3 (AT1G21650.3 Preprotein translocase SecA family protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 23/59 (38.98%), Postives = 29/59 (49.15%), Query Frame = 1


Query: 44  ECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 103
           ECP+C +S++    VP VL CGHT C+ C+            LP + P  I CP C +L
Sbjct: 5   ECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACTVL 53

[Close]

BLAST of ClCG08G004690 vs. NCBI nr
Match: gi|449446247|ref|XP_004140883.1| (PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus])

HSP 1 Score: 547.4 bits (1409), Expect = 1.4e-152
Identity = 264/265 (99.62%), Postives = 264/265 (99.62%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGL SSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]

BLAST of ClCG08G004690 vs. NCBI nr
Match: gi|659089886|ref|XP_008445733.1| (PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo])

HSP 1 Score: 535.4 bits (1378), Expect = 5.6e-149
Identity = 257/265 (96.98%), Postives = 262/265 (98.87%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNCVAGCAGL SSSRK+SHTATECSDDELSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180
           LLWMVENINVERVKSHSAFSGD L+FPVSG+SSR NQVSHNNLRRGHHVRQLDSQGPN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240
           NSHFH+FNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVTVL 240

Query: 241 FALPSFLILYFAYPSLDWLMREIIT 266
           FALPSFLILYFAYPSLDWLMREIIT
Sbjct: 241 FALPSFLILYFAYPSLDWLMREIIT 265

[Close]

BLAST of ClCG08G004690 vs. NCBI nr
Match: gi|595940309|ref|XP_007215820.1| (hypothetical protein PRUPE_ppa010047mg [Prunus persica])

HSP 1 Score: 406.8 bits (1044), Expect = 3.0e-110
Identity = 195/267 (73.03%), Postives = 229/267 (85.77%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSD-GREEVLECPICWESFNIVENVP 60
           MWNFAS+C+AG  GL + S + +  A+ECSDDE SS  GREE LECPICWESFNIVENVP
Sbjct: 1   MWNFASSCIAGSVGLKNDSLRPTQAASECSDDEGSSVVGREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE++N +R+KSHS FSGD   V+P +G +S G+QVSH + RR HH+R ++  G N
Sbjct: 121 FLLWMVESMNGDRIKSHSTFSGDNHAVWPANGNASVGSQVSHTHHRRVHHIRHIEPSGQN 180

Query: 181 NANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVT 240
           + + + +  ++ERL SSLRK L FFVHLTAKFPLV+IFLLI+LY +PA AAILALY+LVT
Sbjct: 181 HVHVN-NYLSVERLHSSLRKSLFFFVHLTAKFPLVVIFLLIILYVIPACAAILALYILVT 240

Query: 241 VLFALPSFLILYFAYPSLDWLMREIIT 266
           V+FALPSFL+LYFAYPSLDWL+REIIT
Sbjct: 241 VVFALPSFLLLYFAYPSLDWLVREIIT 266

[Close]

BLAST of ClCG08G004690 vs. NCBI nr
Match: gi|645249645|ref|XP_008230837.1| (PREDICTED: uncharacterized protein LOC103330072 [Prunus mume])

HSP 1 Score: 405.2 bits (1040), Expect = 8.7e-110
Identity = 196/267 (73.41%), Postives = 229/267 (85.77%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSD-GREEVLECPICWESFNIVENVP 60
           MWNFAS+C+AG  GL + S + +  A+ECSDDE SS  GREE LECPICWESFNIVENVP
Sbjct: 1   MWNFASSCIAGSVGLKNDSLRPTQAASECSDDEGSSVVGREEGLECPICWESFNIVENVP 60

Query: 61  HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 120
           +VLWCGHTLCKNCILGLQWAVVKFPTLP+QLPLFISCPWCNLLSFRLVY+GNLKFP KNY
Sbjct: 61  YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 120

Query: 121 FLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPN 180
           FLLWMVE++N +RVKSHS FSGD   V+P +G +S G+QVSH + RR HH+R ++  G N
Sbjct: 121 FLLWMVESMNGDRVKSHSTFSGDNHPVWPANGNASVGSQVSHTHHRRVHHIRHIEPLGQN 180

Query: 181 NANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLVT 240
           +A  + +  ++ERL SSLRK L FFVHLTAKFPLV+IFLLI+LY +PA AAILALY+L+T
Sbjct: 181 HALVN-NYLSVERLHSSLRKSLFFFVHLTAKFPLVVIFLLIILYVIPACAAILALYILIT 240

Query: 241 VLFALPSFLILYFAYPSLDWLMREIIT 266
           V+FALPSFL+LYFAYPSLDWL+REIIT
Sbjct: 241 VVFALPSFLLLYFAYPSLDWLVREIIT 266

[Close]

BLAST of ClCG08G004690 vs. NCBI nr
Match: gi|359806827|ref|NP_001241055.1| (uncharacterized protein LOC100809368 [Glycine max])

HSP 1 Score: 394.8 bits (1013), Expect = 1.2e-106
Identity = 197/268 (73.51%), Postives = 217/268 (80.97%), Query Frame = 1


Query: 1   MWNFASNCVAGCAGLTSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60
           MWNFASNC+AG  GL + S K +H+A+ECSDDE S  GREE LECPICWESFNIVENVP+
Sbjct: 1   MWNFASNCIAGTVGLKNDS-KPTHSASECSDDENSVIGREEGLECPICWESFNIVENVPY 60

Query: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVY+GNLKFP KNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLKFPRKNYF 120

Query: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRG---HHVRQLDSQGP 180
           LLWMVE++N +R KSHS F GD     +    + G+QVSH NLRRG   H      +Q  
Sbjct: 121 LLWMVESMNGDRGKSHSPFCGDNQQHSIKDNLTMGSQVSHGNLRRGLVRHPETSSSNQYH 180

Query: 181 NNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLLIVLYAVPASAAILALYVLV 240
            N  +H    N ER    LRK L+FFV LTAKFPLVIIFLLIVLYA+PASAAILALYVLV
Sbjct: 181 GNTGNH---LNTERFHVYLRKSLIFFVQLTAKFPLVIIFLLIVLYAIPASAAILALYVLV 240

Query: 241 TVLFALPSFLILYFAYPSLDWLMREIIT 266
           T+LFALPSFLILYF+YPSLDWL+REIIT
Sbjct: 241 TILFALPSFLILYFSYPSLDWLVREIIT 264

The following BLAST results are available for this feature:

BLAST of ClCG08G004690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRI32_MOUSE	9.0e-06	33.33	E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus GN=Trim32 PE=1 SV=2	[more]

BLAST of ClCG08G004690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8G4_CUCSA	9.9e-153	99.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042350 PE=4 SV=1	[more]
M5WTL5_PRUPE	2.1e-110	73.03	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010047mg PE=4 SV=1	[more]
A0A0B2PHT9_GLYSO	8.2e-107	73.51	Uncharacterized protein OS=Glycine soja GN=glysoja_032019 PE=4 SV=1	[more]
C6TIH4_SOYBN	8.2e-107	73.51	Uncharacterized protein OS=Glycine max GN=GLYMA_13G059100 PE=2 SV=1	[more]
V4UXG8_9ROSI	2.4e-106	72.43	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012457mg PE=4 SV=1	[more]

BLAST of ClCG08G004690 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G29270.1	4.0e-89	60.90	RING/U-box superfamily protein	[more]
AT1G69330.1	4.8e-74	54.24	RING/U-box superfamily protein	[more]
AT1G74370.1	5.9e-64	47.27	RING/U-box superfamily protein	[more]
AT1G21651.1	2.5e-06	38.98	zinc ion binding	[more]
AT1G21650.3	2.5e-06	38.98	Preprotein translocase SecA family protein	[more]

BLAST of ClCG08G004690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446247\|ref\|XP_004140883.1\|	1.4e-152	99.62	PREDICTED: uncharacterized protein LOC101203968 [Cucumis sativus]	[more]
gi\|659089886\|ref\|XP_008445733.1\|	5.6e-149	96.98	PREDICTED: uncharacterized protein LOC103488671 [Cucumis melo]	[more]
gi\|595940309\|ref\|XP_007215820.1\|	3.0e-110	73.03	hypothetical protein PRUPE_ppa010047mg [Prunus persica]	[more]
gi\|645249645\|ref\|XP_008230837.1\|	8.7e-110	73.41	PREDICTED: uncharacterized protein LOC103330072 [Prunus mume]	[more]
gi\|359806827\|ref\|NP_001241055.1\|	1.2e-106	73.51	uncharacterized protein LOC100809368 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR017907	Znf_RING_CS
IPR027370	Znf-RING_LisH

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G004690.1	ClCG08G004690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 45..100 score: 10
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 38..100 score: 4.3
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 64..73 scor
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 45..97 score: 5.
None	No IPR available	PANTHER	PTHR13139	RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN	coord: 18..265 score: 5.4E
None	No IPR available	PANTHER	PTHR13139:SF47	SUBFAMILY NOT NAMED	coord: 18..265 score: 5.4E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 40..102 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG08G004690	MELO3C011654	Melon (DHL92) v3.5.1	mewcgB304
ClCG08G004690	Cla002860	Watermelon (97103) v1	wcgwmB405
ClCG08G004690	Cla97C08G147700	Watermelon (97103) v2	wcgwmbB336
ClCG08G004690	Bhi04G001628	Wax gourd	wcgwgoB632
ClCG08G004690	Cucsa.364980	Cucumber (Gy14) v1	cgywcgB626

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG08G004690	Cucurbita maxima (Rimu)	cmawcgB816
ClCG08G004690	Cucurbita moschata (Rifu)	cmowcgB812
ClCG08G004690	Wild cucumber (PI 183967)	cpiwcgB528
ClCG08G004690	Cucumber (Chinese Long) v2	cuwcgB502
ClCG08G004690	Cucurbita pepo (Zucchini)	cpewcgB312
ClCG08G004690	Bottle gourd (USVL1VR-Ls)	lsiwcgB439
ClCG08G004690	Cucumber (Gy14) v2	cgybwcgB460
ClCG08G004690	Melon (DHL92) v3.6.1	medwcgB299
ClCG08G004690	Silver-seed gourd	carwcgB0088
ClCG08G004690	Cucumber (Chinese Long) v3	cucwcgB520