ClCG08G002620 (gene) Watermelon (Charleston Gray)

Overview
NameClCG08G002620
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionSelf-incompatibility S1 family protein
LocationCG_Chr08 : 5754702 .. 5757273 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATACAAAGGATCCTTCTACACATGAGATCATCAACAATGGCACCACATGGACTCATGTTATCGATAATGGTCTTGCTCGTCACCTTGTTCCACAGGTCGATGGCCAAAGGCAAGTTTGATAAGAACAGAAACCATCAAATAATTCCGAAACTACCGTTTGCACCACCGCGACCATCTCTCATTCAATTTCGCAAGTATCATGTCCAGATTCACAACGACTTGCAAATGTACATATTAGACAGTCATTGCTTCTCGAAAGAAGACGATTTAGGATTGCATATACTCTTTCCAGGTGACAAAACTGAGTGGTCATTTAGAGATAACTTTTTCGAGACCACTAAATTCCATTGCAGATTGGAATGGGAAAATGGACTTTTGGAATTTAATTCTTTCCGAAGTGATGTTGATTTCTTGTATAATTTTTGTGGTAATTTCAATTGTTCTTGGAGTGCAAGACAAGATGGAGTTTATTTGACCGATATCAATGGTGAATATGTTTTTCAAGATTATTGGGACATGCTTCATTGAAAAGGCTACATTTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTCCTTTTTCAAAAGTTGACAAAAAAAAAAATAGTTTGAATTTTATTTATACGTTGTACCATTTTTTGTTTAATACTTATGAGTGTCTGAACCAACTTATATATACTTTGTTTAATTTCATAGGACATTCCATCAAAGCCTGGTACATTATTTGGGTGCTGAAGAAACTCATAAAATATTAAATCCTAAGTAGTTCCATGATTATACCATATTTCTTTAAAAGAAATTTATTTGTATACTGTACCATATTTCTTTAAAGGAAATTTATATGTGTATTTTTACCCTTTTTTTCTTTTCATTTCATTTGATTAGTCCTCCTTTTCTGTTATAGAAAGTGGAAGAAAAAAAAATTTGCAGCTCAATTTGTTTGGTTAATTAAGATTATTCAATCTCAGTGTAGAACTAGTAATTCAGGTCAGATACAAAAAATAAATTGTAGTTCTTGACCTCGTTGTGTGTTGAATATTTTTTAGTTTGTTTTGTTGATGGATTTGCTCTTTTTAGAAGCTTAGATGGATTTGAGATTTTTTTTTTCTTCGCTTTCAATACGTGGGATATGGGAGAATCCAAATCTCAAATCTGGAGGTTGATAGTACAATTTTGGAGGTTGATAGTACAATTTTCGATAGGTTAGTTGAGTTCTGTTAACGTAAATATTGAAAATTTTGAATTTTTGCTCCAATTATAACGCCTAAATTGTATGATTGATTTGAGTTTTTTTTTAACATTTGGAGCTTCTTAACACCCCTATTCTAGAGCCATCTCCGTACCAAACAAAAGACAACTTCCCTTTCCTATGATTTATAATTATAACTTAGTCCATTTGGTTGGATAAATTTTTTTTTAAATAATCCTTATGACTATTTAAGAGAGGTTTATTAAAACATAGAAACTATTTATGAGATTTTATCAATACATAAGAACTAAATTCCAACTTTTAAAATCAGAGTCTTAACATTTAACTTTATAATTTCACCTTATTATCATTATTTTGCCTATCCACCTCTTTACTCTTTACTATTTGTTTGTCACATCATGCAAAATTATCTAACCTATAATCTGTTTAATAGACATGGTAAATCATTCTTATTAAAAATTTAGGAACATAATTTAATCATGTTAAATTTCATAAATTCAATACACATGCATCATTAACGAATTGAAACATTTAAAAAACTATATTTCTAAATACATATAATCTTCTCAAACAACAAAGAATTACTAATAATTGAGTCATTTGACCACTATTTTTTAGACTCATTGATTAAGAAAAAAAGAGAAAAAAAAAGTTGTCTTCAAACACCACCCAACATACTAACCAAAAAACACAAAACACATAACAATAAATTCAAACACACAACGATAAATTCAAAGACACTTCCATTTTTAGTATTTCTGCAACAAACTTATGTTTTCTTAAACAGTCTATTTAAACCCAGAGTTCGGTTTCGTTTCAACAAGACTCACAAAACAAACAAACATTATTCTAATTTAATGTTTTAACAATGCCATCACAGGGACTTATGCTTTCAGTAACTCTCTTGTTTGTCGCCTCCTTGGATGTATCGATTGCCTTGAAGACTAGCAAGAAAAAGCAAGAAACAAACTCCGAATCACCAAAACTGCAAGGAGAACCTCTCGTCGCCTTTCGTAAGTTTAATGTTCAGATTCACAATGAATTGCATATGTACTTGTTGGACAGCCATTGTTACTCAAAAGACGACGATTTGGGAGTGCATGTGTTGTACCCAAATGATCGACAAAGTTGGTCGTTCAAAGGTAATTGGTTGGGAACGACAATGTTCCATTGCAAATTGGAGTGGGAAAATGGATCTTTGGAATTTGATGCTTTTTCTAGTAATGTTGAGTTTTTGACGAATTTTTGTGGCAATGCATCATGTTGTTGGAGTGTGAGACAAGATGGGATTTATTTGACCAATCGAAATGGTCAAGTTGTTTTCAAACAACATTGGGAAATGCTTAGAACATGA

mRNA sequence

ATGGACATACAAAGGATCCTTCTACACATGAGATCATCAACAATGGCACCACATGGACTCATGTTATCGATAATGGTCTTGCTCGTCACCTTGTTCCACAGGTCGATGGCCAAAGGCAAGTTTGATAAGAACAGAAACCATCAAATAATTCCGAAACTACCGTTTGCACCACCGCGACCATCTCTCATTCAATTTCGCAAGTATCATGTCCAGATTCACAACGACTTGCAAATGTACATATTAGACAGTCATTGCTTCTCGAAAGAAGACGATTTAGGATTGCATATACTCTTTCCAGGTGACAAAACTGAGTGGTCATTTAGAGATAACTTTTTCGAGACCACTAAATTCCATTGCAGATTGGAATGGGAAAATGGACTTTTGGAATTTAATTCTTTCCGAAGTGATGGACTTATGCTTTCAGTAACTCTCTTGTTTGTCGCCTCCTTGGATGTATCGATTGCCTTGAAGACTAGCAAGAAAAAGCAAGAAACAAACTCCGAATCACCAAAACTGCAAGGAGAACCTCTCGTCGCCTTTCGTAAGTTTAATGTTCAGATTCACAATGAATTGCATATGTACTTGTTGGACAGCCATTGTTACTCAAAAGACGACGATTTGGGAGTGCATGTGTTGTACCCAAATGATCGACAAAGTTGGTCGTTCAAAGGTAATTGGTTGGGAACGACAATGTTCCATTGCAAATTGGAGTGGGAAAATGGATCTTTGGAATTTGATGCTTTTTCTAGTAATGTTGAGTTTTTGACGAATTTTTGTGGCAATGCATCATGTTGTTGGAGTGTGAGACAAGATGGGATTTATTTGACCAATCGAAATGGTCAAGTTGTTTTCAAACAACATTGGGAAATGCTTAGAACATGA

Coding sequence (CDS)

ATGGACATACAAAGGATCCTTCTACACATGAGATCATCAACAATGGCACCACATGGACTCATGTTATCGATAATGGTCTTGCTCGTCACCTTGTTCCACAGGTCGATGGCCAAAGGCAAGTTTGATAAGAACAGAAACCATCAAATAATTCCGAAACTACCGTTTGCACCACCGCGACCATCTCTCATTCAATTTCGCAAGTATCATGTCCAGATTCACAACGACTTGCAAATGTACATATTAGACAGTCATTGCTTCTCGAAAGAAGACGATTTAGGATTGCATATACTCTTTCCAGGTGACAAAACTGAGTGGTCATTTAGAGATAACTTTTTCGAGACCACTAAATTCCATTGCAGATTGGAATGGGAAAATGGACTTTTGGAATTTAATTCTTTCCGAAGTGATGGACTTATGCTTTCAGTAACTCTCTTGTTTGTCGCCTCCTTGGATGTATCGATTGCCTTGAAGACTAGCAAGAAAAAGCAAGAAACAAACTCCGAATCACCAAAACTGCAAGGAGAACCTCTCGTCGCCTTTCGTAAGTTTAATGTTCAGATTCACAATGAATTGCATATGTACTTGTTGGACAGCCATTGTTACTCAAAAGACGACGATTTGGGAGTGCATGTGTTGTACCCAAATGATCGACAAAGTTGGTCGTTCAAAGGTAATTGGTTGGGAACGACAATGTTCCATTGCAAATTGGAGTGGGAAAATGGATCTTTGGAATTTGATGCTTTTTCTAGTAATGTTGAGTTTTTGACGAATTTTTGTGGCAATGCATCATGTTGTTGGAGTGTGAGACAAGATGGGATTTATTTGACCAATCGAAATGGTCAAGTTGTTTTCAAACAACATTGGGAAATGCTTAGAACATGA

Protein sequence

MDIQRILLHMRSSTMAPHGLMLSIMVLLVTLFHRSMAKGKFDKNRNHQIIPKLPFAPPRPSLIQFRKYHVQIHNDLQMYILDSHCFSKEDDLGLHILFPGDKTEWSFRDNFFETTKFHCRLEWENGLLEFNSFRSDGLMLSVTLLFVASLDVSIALKTSKKKQETNSESPKLQGEPLVAFRKFNVQIHNELHMYLLDSHCYSKDDDLGVHVLYPNDRQSWSFKGNWLGTTMFHCKLEWENGSLEFDAFSSNVEFLTNFCGNASCCWSVRQDGIYLTNRNGQVVFKQHWEMLRT
Homology
[Close]
BLAST of ClCG08G002620 vs. TrEMBL
Match: A0A0A0KL79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.8e-46
Identity = 80/136 (58.82%), Postives = 106/136 (77.94%), Query Frame = 1 

Query: 159 SKKKQETNSESPKLQ--GEPLVAFRKFNVQIHNELHMYLLDSHCYSKDDDLGVHVLYPND 218
           +KKK +  S +PKL     P+V F +F V+IHN+L M++LDSHCYSKDDDLG+H+L+P++
Sbjct: 2   AKKKAKNKSPTPKLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDE 61

Query: 219 RQSWSFKGNWLGTTMFHCKLEWENGSLEFDAFSSNVEFLTNFCGNASCCWSVRQDGIYLT 278
           +Q WSFKGNW+ TT FHC+LEWE G LEFD+F S  +F+TN+CGN +C WS RQDG+YL 
Sbjct: 62  KQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLN 121

Query: 279 NRNGQVVFKQHWEMLR 293
           N  G+ VF  +WEM+R
Sbjct: 122 NAAGEQVFYNYWEMIR 137

[Close]
BLAST of ClCG08G002620 vs. TrEMBL
Match: A0A0A0KL79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.5e-24
Identity = 54/93 (58.06%), Postives = 71/93 (76.34%), Query Frame = 1 

Query: 43  KNRNHQIIPKLPFAPPRPSLIQFRKYHVQIHNDLQMYILDSHCFSKEDDLGLHILFPGDK 102
           K +N    PKL  + P   ++ F ++ V+IHNDL+M+ILDSHC+SK+DDLGLHILFP +K
Sbjct: 5   KAKNKSPTPKL--SVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDEK 64

Query: 103 TEWSFRDNFFETTKFHCRLEWENGLLEFNSFRS 136
            +WSF+ N+  TT FHCRLEWE G LEF+SF+S
Sbjct: 65  QDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKS 95


HSP 2 Score: 163.3 bits (412), Expect = 4.4e-37
Identity = 74/154 (48.05%), Postives = 104/154 (67.53%), Query Frame = 1 

Query: 138 LMLSVTLLFVASLDVSIALKTSKKKQETNSESPKLQGEPLVAFRKFNVQIHNELHMYLLD 197
           L+L + L  +   D+S+A + S   Q+++          ++    + ++IHN+L MYLLD
Sbjct: 6   LVLLIFLFLIVLFDMSMA-RFSFAPQKSS----------IIQLHHYQIEIHNDLEMYLLD 65

Query: 198 SHCYSKDDDLGVHVLYPNDRQSWSFKGNWLGTTMFHCKLEWENGSLEFDAFSSNVEFLTN 257
           SHC+SKD+DLG+H+L+P + Q WSF+ N   TT F C LEWENG LEFD+F +N  FL N
Sbjct: 66  SHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFKTNHNFLNN 125

Query: 258 FCGNASCCWSVRQDGIYLTNRNGQVVFKQHWEML 292
           FCGN +C WS RQDG+YLTN  G+ VF+ +W+ML
Sbjct: 126 FCGNLTCSWSARQDGVYLTNVKGEYVFQDYWDML 148

[Close]
BLAST of ClCG08G002620 vs. TrEMBL
Match: A0A0A0KSN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G538550 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.6e-32
Identity = 69/122 (56.56%), Postives = 88/122 (72.13%), Query Frame = 1 

Query: 15  MAPHGLMLSIMVLLVTLFHRSMAKGKFDKNRNHQIIPKLPFAPPRPSLIQFRKYHVQIHN 74
           MAPH L+L I + L+ LF  SMA+                FAP + S+IQ   Y ++IHN
Sbjct: 1   MAPHLLVLLIFLFLIVLFDMSMAR--------------FSFAPQKSSIIQLHHYQIEIHN 60

Query: 75  DLQMYILDSHCFSKEDDLGLHILFPGDKTEWSFRDNFFETTKFHCRLEWENGLLEFNSFR 134
           DL+MY+LDSHCFSK++DLGLHILFPG+  +WSF+DN FETTKF C LEWENGLLEF+SF+
Sbjct: 61  DLEMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFK 108

Query: 135 SD 137
           ++
Sbjct: 121 TN 108


HSP 2 Score: 147.9 bits (372), Expect = 1.9e-32
Identity = 69/124 (55.65%), Postives = 93/124 (75.00%), Query Frame = 1 

Query: 140 LSVTLLFVASLDVSIALKTSKKKQETNSESPKLQ--GEPLVAFRKFNVQIHNELHMYLLD 199
           L + LL + S +VS+A    KKK ++ +E P L     P+V+F KF V+IHN+L+MYLLD
Sbjct: 9   LLLVLLLLTSFNVSMA---KKKKAKSKTEKPDLPDPNNPIVSFEKFRVEIHNDLNMYLLD 68

Query: 200 SHCYSKDDDLGVHVLYPNDRQSWSFKGNWLGTTMFHCKLEWENGSLEFDAFSSNVEFLTN 259
           S CYSKDD+ G+HVL+P+++Q+WSFKGNW  TT FHC+LEWE G LEFD+F S+  F+T+
Sbjct: 69  SRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIGYLEFDSFKSDPAFVTD 128

Query: 260 FCGN 262
           FC N
Sbjct: 129 FCCN 129

[Close]
BLAST of ClCG08G002620 vs. TrEMBL
Match: A0A0A0KIQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G017790 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26
Identity = 60/115 (52.17%), Postives = 84/115 (73.04%), Query Frame = 1 

Query: 22  LSIMVLLVTLFHRSMAKGKFDKNRNHQIIPKLPFAPPRPSLIQFRKYHVQIHNDLQMYIL 81
           L +++LL+T F+ SMAK K  K++  +  P LP   P   ++ F K+ V+IHNDL MY+L
Sbjct: 9   LLLVLLLLTSFNVSMAKKKKAKSKTEK--PDLP--DPNNPIVSFEKFRVEIHNDLNMYLL 68

Query: 82  DSHCFSKEDDLGLHILFPGDKTEWSFRDNFFETTKFHCRLEWENGLLEFNSFRSD 137
           DS C+SK+D+ GLH+LFP ++  WSF+ N+ +TT FHCRLEWE G LEF+SF+SD
Sbjct: 69  DSRCYSKDDNFGLHVLFPDEQQNWSFKGNWDDTTTFHCRLEWEIGYLEFDSFKSD 119


HSP 2 Score: 94.7 bits (234), Expect = 1.9e-16
Identity = 47/111 (42.34%), Postives = 60/111 (54.05%), Query Frame = 1 

Query: 180 FRKFNVQIHNELHMYLLDSHCYSKDDDLGVHVLYPNDRQSWSFKGNWLGTTMFHCKLEWE 239
           F K+ V I N L    L +HC SKDDDLGVH L  +   SW F+ N+   T++ C L W 
Sbjct: 29  FNKYRVHIINGLTNETLTAHCKSKDDDLGVHELAVDQEFSWEFRINFFDRTLYFCNLVWN 88

Query: 240 NGSLEFDAFSSNVEFLTNFCGNASCCWSVRQDGIYLTN-RNGQVVFKQHWE 290
            G   FDAF  + + L N C ++ C W  R DG+YL N  + Q   K  WE
Sbjct: 89  GGHKTFDAFLVDEKALLNSCSSSDCMWRARDDGVYLFNYPHKQYRLKYQWE 139

[Close]
BLAST of ClCG08G002620 vs. TrEMBL
Match: M5VMC1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024473mg PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.3e-08
Identity = 32/72 (44.44%), Postives = 40/72 (55.56%), Query Frame = 1 

Query: 65  FRKYHVQIHNDLQMYILDSHCFSKEDDLGLHILFPGDKTEWSFRDNFFETTKFHCRLEWE 124
           F KY V I N L    L +HC SK+DDLG+H L    +  W FR NFF+ T + C L W 
Sbjct: 29  FNKYRVHIINGLTNETLTAHCKSKDDDLGVHELAVDQEFSWEFRINFFDRTLYFCNLVWN 88

Query: 125 NGLLEFNSFRSD 137
            G   F++F  D
Sbjct: 89  GGHKTFDAFLVD 100


HSP 2 Score: 91.3 bits (225), Expect = 2.1e-15
Identity = 44/108 (40.74%), Postives = 59/108 (54.63%), Query Frame = 1 

Query: 173 QGEPLVAFRKFNVQIHNELHMYLLDSHCYSKDDDLGVHVLYPNDRQSWSFKGNWLGTTMF 232
           + E    F K++V + N L  +LL +HC S +DDLGVH L P   Q W+F+ N    T F
Sbjct: 22  RSEAFEIFPKYHVHVVNGLKKHLLQTHCVSVNDDLGVHDLAPRQEQVWAFRINISFNTRF 81

Query: 233 HCKLEWENGSLEFDAF---SSNVEFLTNFCGNASCCWSVRQDGIYLTN 278
            C L W+ G   FDAF      V F+   C N +C W  ++DGIYL +
Sbjct: 82  ECTLSWKGGKKRFDAFYPWFDGVNFMREHCVNYNCYWRAQEDGIYLVS 129

[Close]
BLAST of ClCG08G002620 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 69.3 bits (168), Expect = 4.4e-12
Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 1 

Query: 199 HCYSKDDDLGVHVLYPNDRQSWSFKGNWLGTTMFHCKLEWENGSLEFDAFSSNVEFLTNF 258
           HC SK+DDLG   L   +R SW+F  N L +T F C +  +NG +  + F  +V  L + 
Sbjct: 58  HCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDDV-ILFHR 117

Query: 259 CGNASCCWSVRQDGIYLTN-RNGQVVFKQHWEM 291
           CG  +C W+ + DG+YL N  +G+ V  + WE+
Sbjct: 118 CGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEV 149

[Close]
BLAST of ClCG08G002620 vs. TAIR10
Match: AT5G12060.1 (AT5G12060.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 61.6 bits (148), Expect = 9.2e-10
Identity = 31/89 (34.83%), Postives = 46/89 (51.69%), Query Frame = 1 

Query: 185 VQIHNELHMYL-LDSHCYSKDDDLGVHVLYPNDRQSWSFKGNWLGTTMFHCKLEWENGSL 244
           V+I N L   L L+ HC S DDDLG+ +L PN   S+ F+ + +GTT+F+C   W   S 
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 245 EFDAFSSNVEFLTNFCGNASCCWSVRQDG 273
            FD +  + + + +     +C W +   G
Sbjct: 99  RFDIYDDDRDGVRSHISCINCIWDISIQG 127


HSP 2 Score: 45.4 bits (106), Expect = 6.8e-05
Identity = 21/56 (37.50%), Postives = 26/56 (46.43%), Query Frame = 1 

Query: 81  LDSHCFSKEDDLGLHILFPGDKTEWSFRDNFFETTKFHCRLEWENGLLEFNSFRSD 137
           L+ HC S +DDLGL IL P     + FR +   TT F+C   W      F+ +  D
Sbjct: 51  LNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDD 106

[Close]
BLAST of ClCG08G002620 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 33/92 (35.87%), Postives = 49/92 (53.26%), Query Frame = 1 

Query: 199 HCYSKDDDLGVHVLYPNDRQSWSFKGNWLGTTMFHCKLEWENGSLEFDAFSSNVEFLTNF 258
           HC SK++DLG   L   DR SW+F  N L +T+F C +  ++G +    F  +V  L + 
Sbjct: 58  HCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDDV-ILFHR 117

Query: 259 CGNASCCWSVRQDGIYLTNRN-GQVVFKQHWE 290
           C   +C W+ + DG+YL N   G+ V  + W+
Sbjct: 118 CDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]
BLAST of ClCG08G002620 vs. TAIR10
Match: AT3G55252.1 (AT3G55252.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-08
Identity = 42/120 (35.00%), Postives = 54/120 (45.00%), Query Frame = 1 

Query: 14  TMAPHGLMLSIMVLLVTLFHRSMAKGKFDKNRNHQIIPKLPFAPPRPS---LIQFRKYHV 73
           T  PH +ML ++   + LF  ++            ++   P   P      L+   + HV
Sbjct: 4   TSKPHFIMLCMIYYTLILFVSAL------------VLSDAPAEAPTSGGDGLLPLSEKHV 63

Query: 74  QIHNDLQ-MYILDSHCFSKEDDLGL-HILFPGDKTEWSFR--DNFFETTKFHCRLEWENG 127
            I N L+   IL+ HC S EDD GL HI + G    W FR   NFF+TTKF C   W NG
Sbjct: 64  VIRNKLKNREILNVHCRSSEDDFGLKHIPWNG---AWGFRFYVNFFKTTKFRCHFTWHNG 108

[Close]
BLAST of ClCG08G002620 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07
Identity = 35/96 (36.46%), Postives = 48/96 (50.00%), Query Frame = 1 

Query: 185 VQIHNEL-HMYLLDSHCYSKDDDLGVHVLYPNDRQSWSFKGNWLGTTMFHCKLEWE---N 244
           V + N+L H  LL  HC SKDDDLG H+L       ++F  N   TT F C+++      
Sbjct: 29  VVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFK 88

Query: 245 GSLEFDAFSSNVEFLTNFCGNASCCWSVRQDGIYLT 277
             L+F A+ ++     +    ASC W  R+DGIY +
Sbjct: 89  HHLDFVAYETS----WSKALEASCKWIGREDGIYFS 120


HSP 2 Score: 48.9 bits (115), Expect = 6.2e-06
Identity = 21/43 (48.84%), Postives = 28/43 (65.12%), Query Frame = 1 

Query: 80  ILDSHCFSKEDDLGLHILFPGDKTEWSFRDNFFETTKFHCRLE 123
           +L  HC SK+DDLG HIL  G   E++F DN ++TT F C+++
Sbjct: 40  LLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMD 82

[Close]
BLAST of ClCG08G002620 vs. NCBI nr
Match: gi|659105271|ref|XP_008453055.1| (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 102/133 (76.69%), Postives = 114/133 (85.71%), Query Frame = 1 

Query: 161 KKQETNSESPKLQGEPLVAFRKFNVQIHNELHMYLLDSHCYSKDDDLGVHVLYPNDRQSW 220
           K QET  E PK   EPLV F KFN++I+NEL MYLLDSHCYSKDDDLG  VLYPND QSW
Sbjct: 9   KSQETGPELPKPH-EPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQSW 68

Query: 221 SFKGNWLGTTMFHCKLEWENGSLEFDAFSSNVEFLTNFCGNASCCWSVRQDGIYLTNRNG 280
           SF+GNWLGTT FHCKLEWENG LEFDAFS++V+FLTNFC  +SCCWS RQDG+YLTN+NG
Sbjct: 69  SFRGNWLGTTNFHCKLEWENGYLEFDAFSNDVKFLTNFCAKSSCCWSARQDGVYLTNQNG 128

Query: 281 QVVFKQHWEMLRT 294
           QVVF Q+WEM+RT
Sbjct: 129 QVVFNQNWEMIRT 140

[Close]
BLAST of ClCG08G002620 vs. NCBI nr
Match: gi|659105271|ref|XP_008453055.1| (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 117.1 bits (292), Expect = 5.2e-23
Identity = 49/94 (52.13%), Postives = 71/94 (75.53%), Query Frame = 1 

Query: 43  KNRNHQIIPKLPFAPPRPSLIQFRKYHVQIHNDLQMYILDSHCFSKEDDLGLHILFPGDK 102
           K ++ +  P+LP   P   L+ F K++++I+N+LQMY+LDSHC+SK+DDLG  +L+P D+
Sbjct: 7   KIKSQETGPELP--KPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDE 66

Query: 103 TEWSFRDNFFETTKFHCRLEWENGLLEFNSFRSD 137
             WSFR N+  TT FHC+LEWENG LEF++F +D
Sbjct: 67  QSWSFRGNWLGTTNFHCKLEWENGYLEFDAFSND 98


HSP 2 Score: 192.6 bits (488), Expect = 9.8e-46
Identity = 80/136 (58.82%), Postives = 106/136 (77.94%), Query Frame = 1 

Query: 159 SKKKQETNSESPKLQ--GEPLVAFRKFNVQIHNELHMYLLDSHCYSKDDDLGVHVLYPND 218
           +KKK +  S +PKL     P+V F +F V+IHN+L M++LDSHCYSKDDDLG+H+L+P++
Sbjct: 2   AKKKAKNKSPTPKLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDE 61

Query: 219 RQSWSFKGNWLGTTMFHCKLEWENGSLEFDAFSSNVEFLTNFCGNASCCWSVRQDGIYLT 278
           +Q WSFKGNW+ TT FHC+LEWE G LEFD+F S  +F+TN+CGN +C WS RQDG+YL 
Sbjct: 62  KQDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLN 121

Query: 279 NRNGQVVFKQHWEMLR 293
           N  G+ VF  +WEM+R
Sbjct: 122 NAAGEQVFYNYWEMIR 137

[Close]
BLAST of ClCG08G002620 vs. NCBI nr
Match: gi|700194417|gb|KGN49594.1| (hypothetical protein Csa_5G016040 [Cucumis sativus])

HSP 1 Score: 121.7 bits (304), Expect = 2.1e-24
Identity = 54/93 (58.06%), Postives = 71/93 (76.34%), Query Frame = 1 

Query: 43  KNRNHQIIPKLPFAPPRPSLIQFRKYHVQIHNDLQMYILDSHCFSKEDDLGLHILFPGDK 102
           K +N    PKL  + P   ++ F ++ V+IHNDL+M+ILDSHC+SK+DDLGLHILFP +K
Sbjct: 5   KAKNKSPTPKL--SVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDEK 64

Query: 103 TEWSFRDNFFETTKFHCRLEWENGLLEFNSFRS 136
            +WSF+ N+  TT FHCRLEWE G LEF+SF+S
Sbjct: 65  QDWSFKGNWIATTSFHCRLEWEVGYLEFDSFKS 95


HSP 2 Score: 183.3 bits (464), Expect = 5.9e-43
Identity = 82/136 (60.29%), Postives = 101/136 (74.26%), Query Frame = 1 

Query: 157 KTSKKKQETNSESPKLQGEPLVAFRKFNVQIHNELHMYLLDSHCYSKDDDLGVHVLYPND 216
           K S K +    + P L   PLV+F  F V+IHNEL  Y+LDS CYSKDDDLG+H LYPN+
Sbjct: 14  KKSPKNRVPKPDLP-LPNNPLVSFEGFRVEIHNELLTYILDSSCYSKDDDLGLHRLYPNE 73

Query: 217 RQSWSFKGNWLGTTMFHCKLEWENGSLEFDAFSSNVEFLTNFCGNASCCWSVRQDGIYLT 276
           +Q+WSFKGNW+ TT FHCKLEWE   LEFD+F S+ +F+TN+CGN +C WS RQDG+YL 
Sbjct: 74  QQNWSFKGNWIATTDFHCKLEWEIAYLEFDSFKSDPDFVTNYCGNRTCIWSARQDGVYLN 133

Query: 277 NRNGQVVFKQHWEMLR 293
           N  GQ VF  +WEML+
Sbjct: 134 NAVGQQVFYDYWEMLK 148

[Close]
BLAST of ClCG08G002620 vs. NCBI nr
Match: gi|659134192|ref|XP_008467075.1| (PREDICTED: uncharacterized protein LOC103504513, partial [Cucumis melo])

HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20
Identity = 50/97 (51.55%), Postives = 65/97 (67.01%), Query Frame = 1 

Query: 40  KFDKNRNHQIIPKLPFAPPRPSLIQFRKYHVQIHNDLQMYILDSHCFSKEDDLGLHILFP 99
           K  KNR    +PK     P   L+ F  + V+IHN+L  YILDS C+SK+DDLGLH L+P
Sbjct: 15  KSPKNR----VPKPDLPLPNNPLVSFEGFRVEIHNELLTYILDSSCYSKDDDLGLHRLYP 74

Query: 100 GDKTEWSFRDNFFETTKFHCRLEWENGLLEFNSFRSD 137
            ++  WSF+ N+  TT FHC+LEWE   LEF+SF+SD
Sbjct: 75  NEQQNWSFKGNWIATTDFHCKLEWEIAYLEFDSFKSD 107


HSP 2 Score: 163.3 bits (412), Expect = 6.4e-37
Identity = 74/154 (48.05%), Postives = 104/154 (67.53%), Query Frame = 1 

Query: 138 LMLSVTLLFVASLDVSIALKTSKKKQETNSESPKLQGEPLVAFRKFNVQIHNELHMYLLD 197
           L+L + L  +   D+S+A + S   Q+++          ++    + ++IHN+L MYLLD
Sbjct: 6   LVLLIFLFLIVLFDMSMA-RFSFAPQKSS----------IIQLHHYQIEIHNDLEMYLLD 65

Query: 198 SHCYSKDDDLGVHVLYPNDRQSWSFKGNWLGTTMFHCKLEWENGSLEFDAFSSNVEFLTN 257
           SHC+SKD+DLG+H+L+P + Q WSF+ N   TT F C LEWENG LEFD+F +N  FL N
Sbjct: 66  SHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFKTNHNFLNN 125

Query: 258 FCGNASCCWSVRQDGIYLTNRNGQVVFKQHWEML 292
           FCGN +C WS RQDG+YLTN  G+ VF+ +W+ML
Sbjct: 126 FCGNLTCSWSARQDGVYLTNVKGEYVFQDYWDML 148

[Close]
BLAST of ClCG08G002620 vs. NCBI nr
Match: gi|700196255|gb|KGN51432.1| (hypothetical protein Csa_5G538550 [Cucumis sativus])

HSP 1 Score: 146.4 bits (368), Expect = 8.0e-32
Identity = 69/122 (56.56%), Postives = 88/122 (72.13%), Query Frame = 1 

Query: 15  MAPHGLMLSIMVLLVTLFHRSMAKGKFDKNRNHQIIPKLPFAPPRPSLIQFRKYHVQIHN 74
           MAPH L+L I + L+ LF  SMA+                FAP + S+IQ   Y ++IHN
Sbjct: 1   MAPHLLVLLIFLFLIVLFDMSMAR--------------FSFAPQKSSIIQLHHYQIEIHN 60

Query: 75  DLQMYILDSHCFSKEDDLGLHILFPGDKTEWSFRDNFFETTKFHCRLEWENGLLEFNSFR 134
           DL+MY+LDSHCFSK++DLGLHILFPG+  +WSF+DN FETTKF C LEWENGLLEF+SF+
Sbjct: 61  DLEMYLLDSHCFSKDNDLGLHILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFK 108

Query: 135 SD 137
           ++
Sbjct: 121 TN 108


HSP 2 Score: 153.3 bits (386), Expect = 6.6e-34
Identity = 62/105 (59.05%), Postives = 83/105 (79.05%), Query Frame = 1 

Query: 173 QGEPLVAFRKFNVQIHNELHMYLLDSHCYSKDDDLGVHVLYPNDRQSWSFKGNWLGTTMF 232
           Q   ++  R + V+IHN+L MYLLDSHC+SKD+DLG+H+L+P ++Q WSF+ N   TT F
Sbjct: 11  QKPSIIQLRHYQVKIHNDLEMYLLDSHCFSKDNDLGLHILFPGEQQDWSFEDNIFETTKF 70

Query: 233 HCKLEWENGSLEFDAFSSNVEFLTNFCGNASCCWSVRQDGIYLTN 278
            C+LEWENG LEFD+F S+++FL NFCGN +C WS +QDG+YLTN
Sbjct: 71  RCRLEWENGLLEFDSFKSDLDFLNNFCGNLTCSWSAKQDGVYLTN 115

The following BLAST results are available for this feature:
BLAST of ClCG08G002620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KL79_CUCSA6.8e-4658.82Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1[more]
A0A0A0KL79_CUCSA1.5e-2458.06Uncharacterized protein OS=Cucumis sativus GN=Csa_5G016040 PE=4 SV=1[more]
A0A0A0KSN2_CUCSA5.6e-3256.56Uncharacterized protein OS=Cucumis sativus GN=Csa_5G538550 PE=4 SV=1[more]
A0A0A0KIQ4_CUCSA1.6e-2652.17Uncharacterized protein OS=Cucumis sativus GN=Csa_5G017790 PE=4 SV=1[more]
M5VMC1_PRUPE4.3e-0844.44Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024473mg PE=4 SV=1[more]
BLAST of ClCG08G002620 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16295.14.4e-1238.71 S-protein homologue 1[more]
AT5G12060.19.2e-1034.83 Plant self-incompatibility protein S1 family[more]
AT4G29035.11.6e-0935.87 Plant self-incompatibility protein S1 family[more]
AT3G55252.13.9e-0835.00 Plant self-incompatibility protein S1 family[more]
AT5G04350.12.5e-0736.46 Plant self-incompatibility protein S1 family[more]
BLAST of ClCG08G002620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659105271|ref|XP_008453055.1|1.6e-5676.69PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo][more]
gi|659105271|ref|XP_008453055.1|5.2e-2352.13PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo][more]
gi|700194417|gb|KGN49594.1|2.1e-2458.06hypothetical protein Csa_5G016040 [Cucumis sativus][more]
gi|659134192|ref|XP_008467075.1|1.9e-2051.55PREDICTED: uncharacterized protein LOC103504513, partial [Cucumis melo][more]
gi|700196255|gb|KGN51432.1|8.0e-3256.56hypothetical protein Csa_5G538550 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G002620.1ClCG08G002620.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 69..136
score: 5.8E-16coord: 184..288
score: 1.3
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 180..278
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG08G002620Cla003790Watermelon (97103) v1wcgwmB403
ClCG08G002620Cla97C08G146570Watermelon (97103) v2wcgwmbB336
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG08G002620Cucumber (Chinese Long) v3cucwcgB518
ClCG08G002620Wax gourdwcgwgoB633
ClCG08G002620Cucumber (Gy14) v1cgywcgB627
ClCG08G002620Cucurbita maxima (Rimu)cmawcgB437
ClCG08G002620Cucurbita moschata (Rifu)cmowcgB429
ClCG08G002620Wild cucumber (PI 183967)cpiwcgB526
ClCG08G002620Cucumber (Chinese Long) v2cuwcgB500
ClCG08G002620Melon (DHL92) v3.5.1mewcgB297
ClCG08G002620Watermelon (97103) v1wcgwmB410
ClCG08G002620Cucurbita pepo (Zucchini)cpewcgB532
ClCG08G002620Bottle gourd (USVL1VR-Ls)lsiwcgB440
ClCG08G002620Cucumber (Gy14) v2cgybwcgB457
ClCG08G002620Melon (DHL92) v3.6.1medwcgB297