ClCG08G001160 (gene) Watermelon (Charleston Gray)

Overview
NameClCG08G001160
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionmRNA export factor-like protein
LocationCG_Chr08 : 2408234 .. 2417676 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAGAAATCTTTTCTTCTCCGCTGCTGCAAGGTTAACTTCTCAGTTTGCGTGCAAGGTTACTAACTCCTCTGCTCTTCTCCGCCGCTGCTCGCCACAGCTCGCCAGCCGTCTCCGATTGTCGTTCACCAGCCGCTTTCGTTCGACGTCAGCCGCCGCCTCCGTCTGCGTTCGTGCGTGCGCCGTTGCACTTGCCTGCCACCGGCCACATCTCCTCTGCTAGCGCCGACAGCGTCCCCTCCGCTTGTGCCAACCGCCGCCAACCTTCCAGCGCCGCCGTTTCACGGTGGGTTCGCCAGATTCTTGTCGTTTTGGTAAATTTCAGTATTTCGTGAGTTTTCTTGGAGGTTATTGAATACCTTTTGATTCTTTGCCTTATTTGGTGGTTCCTAATGCGAATTGGTTTTAAATTGAAAATTGGGAACTTTTGGAGCCACTGTCCAACAACGTTAATGATCGATTTTTTCGATTTCAGATCAATTTTGGTGAGTAAAAGTACAATGTAAATGTTCTGGGTGACTGAAAATTGGGTTTCTAACCCCCTAATTTTTTAATGTGTTTAGGTTGGAATTTGAAGTTTGGAAGAAGAGTATTGGGACCTAATTGTATTTTGGGTAAGGCTATTGGTTCAATTGTTGAGTAAATTGTTTTGGATTTATGGCTAAAAATGATAAGTAGTGATCGATGATTTGGATCGAACAACCTTGTTGACCTTTAGATCTCAAACTCAAACACTTCAAATCAATATGATTTCAGCCCCTTGGAATGGCTAGACGACGGATTACTTAGACGACCTTGATGTTTGAATCACTCCACAAACAAGATTGAAGTCAAGCTTGAATGATTTTGAACATTTTAATGTAACATAACAAAGACACACTATCATAAAACACTTGAGAGAGGGTGAGATGAGCTACTTACCTCTTTGGTTGCTTCTATATTTTTCTTTTATGAGGGCTTAGAGATTTGGGTGGTTCTTTCTAACCTTGTGTTACAAATGAGCCTCTATAGGGTATTTATAGACCTCCACCTCCCATTTGATTTGATCCAATTGTTAGAATCTTTAGCTTTACCAAGAACTTTCTAGATTATGCTAGCTATTCTTAGACTTCTATAGAACTCTCTAGAAACATCTAGAAATTCATACATGTTCTAGAACATTCTAGAGGTATCTAGGATATTCACACACCTTTTAGAACTTTCTAGAGACATCTAGGAGATTCGTGGATGTTCTAAAACTTTCTAGAACTTTTCTTTTGCAAGTTTTGATGGTCTAGCATTGTGGTGCTCTTGGTTTGGGTCATCACATCTTGGGTGTGTAGAATGGAGTTAGGCCGAGCCTTGTAAAATTTATTTAATTACTAAATTAATATTTTGTTTGTTATTTATTTAATAACCAATAAGATTTATAGGTAAATCTTAACTTTAGTGTCTTAATTTTAAAAAATGGTATTCACTCGTTAAGTCTAGAACGATTGAATTTAAGAATGTAATTTTGTATAATATTTTCATACAAACTTGGGATGTTACAAAATGTCATAGAATTACAAAAGAAACATAGCTCAAAGCTAAAAGAGAGCTCAAAGAATCTTTTTCCTACCTTCTTCAAGTCTCCTCCAAGTCTCTTCCCTCTATCCAAACCACGAACAACGCTTCTTTCTCCTCTTGCTGCTAGCAACGTAACTTGGTCATCATCTCCTTCATCGGAACCATCACCTACATATTCCTCCTCTTGAGCTTGGTATCGAGCCTCTAACCGTTCCATACGTTCTATCAAAGCTTTCATAGCACGAAAATTGCATTCCATGGTTGCTTGTTGTGCTTGTTGCCTTCGTTCATTGGAGATAGTAGGTAATTCTTCGGGATTTGCCATGCCGAAAAAGAACAAAAAGGTAACCAAAAAAAAAAAAAAAAATAGGACCTCACAAGCACTCCCTCATGTGTTTCACTTGTTAATGTAGTTCACTCATATTTAACACTCAAGACTCTTATCAATGTACCACTCCCTCACTAACACACCCTCTCAAGTACAAAAGAATCACACTCCAAAACAACAATGTATATATTCAACAAAGTGAAAGAGCCAATATCAATTTAAAGTGTTTTTGAACAGCACACTCGGAATACAATCAAGAGTATTAGAGGAGCAATCCAAAAAACAACAAAGAAACGAGTTAAAATAAGACAATGAATATGGAAGGAACGAAAAGGATTAGAAAAAAAAAATAATAAAAAGAAGCAAACTTAGATCAAATGGAAAGATCAGAATGAGAAAGAAGGGGAAAGGTTAGCATTAGAAAGTGTAGAATTCAAAATATTAATTTAAATGTAACTCTCAACAAAAATAATTTATTATGTTGTTTAATTAGGGCTTAACAATATAAGAGTGATACATAATAGCAAGAAAGAGAACATTTAATGAGCCTAATTGTAACCACCAACATTTAATGACCAACATTGTTTCTTTTTTACAGATAATCAAAATTCAAACATGTTTTTACCACGAGCCATCCGAATTTGGAGATGACAAAGAATAACGAAATGTAGCTAAGAGATAGATATAAAACGTTGTAGAAGGCATCATCACGAAAAAGAAATGGAACAAACTTTTTCCTTTTTGTGAGACTAATTCAGAACATGCTAGAACTAAAGAATTGAAGCAAAGTATTAGAGAATTCAATAGATGAACACAACGAAAACATAGGTCCGATCAAAAAGCCTAATGCTCTAATACCAAATGTTAAGTAACCCTTGAGAATTTTGATCCAACAACCTAGTTAGGTAAGCAACACCTTTAGATCTAATACTCAAAACCCCCAAAACAACATGAAATCAACCCAAGAAATAAATTTTGCAAGGAATTTTACCTTGATGATCAAGATCAAGAGTAGAGAAAACTCGTTTCTAAACTTGAGATTCGAATCACACCAACCTTGTTAAGAAACAACACCTTTAGATCTAATACTCAAAACCCTCAAAACAACATGAAATTAACCCAAGGAATAAATTTTGCAAGGAATTTTACCTTGATGATCAAAGATCAAGAGTAGAGAAAACTCATTTCTAAACTCAAGATTCAAATCACACCAACCTTGTAACGACCCGACTTTTCTAACCAACACTGGTAATATATTGGAAAATGTAAATATAAATCACATATACCATGGTTTATTTTTTGATGTGTTTATAAATACACTAGAAAATGTAAATATACATCGCATATATTATTTGGTATATAATGCTATATATTGTATCAATTGTCTTGTTCATGCACTTATCAAATATAACTTGGTTTATTTCTAGAAAATTCAATTATATATAGTGTTGTACATTCCAAATATACCTTATCTTCTCTTTTGAAACTTCTTGCCAATTCTTACTTTCATTTATGAGGGCAACTATTTTCATATTTTTGGAGAAACTTTCCTTATTTTTGAAAAGAAAACCGTTTCGGGAAATTTATAACCACAAGAAACTTCTTTTATATGCTTCTTCTATTGTGTGTATATATAAACAATAAGAAAACTCATATTTTTTAATACATATAAACACAGTAAGAAGGCTGAAAAACTAATTTGGACCATATTTGATAGTTTTGGTTTTTCCAAATGCATTATGATTGAAAATATCTTTTGATGTGTTGATTAATGTAAGTTATGCATGATATTCATGAACAATTTCATGTTTTAGCATGACTAGAGTTATGCACGTTTTCCTTTACTCACCTTATAAATAAAGTTAAGTTATTATTGAAGTTTTTCGTTTTAAATTTCATACATAAAGTAATGGCCCAGTCAAAGTCCAGTCGACACATCTGCTCTTCAAATATCTCTTTTCTGTTTAATGTTATTTGGCACAATATCAATATACTCACGCTTCATGCAAATCTCTTGTTATTGTACATTGTGATACTTTCAGATAGCTTCGAATGTCTGCATTTGCGAACCCCAATCCTAATAAATCCTTTGAGGTAAGCAATTATTGATGTGTGCCTCATGCGTTGTAGATTTTGGATTTCAACTTAATTTGTAAATCAGTTTGATGCCTAGTTTTGTGTGGTTTAAACTTAAATGTTGTGTTTTCTAAATGTTTGTTTTTAGGTTGCTCAGCCTCCTAGTGATTCTGTGTCGAGCCTTAGTTTTAGTCCAAAGGCCAATCACTTGGTTGCGACTTCATGGGATAATCAGGTCCTTTTCTTTTCCCTTTTTTTTGTGCTCTTGCTTATTTAATCATTATTTTAATTTTTTATCCAGATTAAGGGTTACTTTTATGAAAACTAGGAAATTTTGATTGCTATTTTCAATTGGTTCTTTGGATATTGAGCAAATTAGCTAAGAGAATGTCAAACTGATATATAGCATTCGACGAAGTCCAGAATTTCATATTTAATGACTTCTGCAGGTTCGTTGTTGGGAAATAATGCAAAATGCAGGTAATGTTGTCAGCACGCCTAAGGCTTTTATATCCCACGATCAACCGGTATATAACAATTTAGTTTTGCTGTTTCTGATTTAATTAGAATTTTGTTGCTGTAAGATCCAAAACATGGCTAAGTTATATTGCACATTACTTTTTGGCTTAGGTTTTATGCTCAGCATGGAAGGATGATGGAACGACTGTGTTTTCTGGAGGCTGCGATAAACAAGTTAAAATGTGGCCCTTATTGTCAGGTGGTCAAGCCATGACGATAGCCATGCATGAAGCACCCGTCAAAGAAGTTGCTTGGATCCCTGAGTTGAGCCTATTGGCCTCTGGAAGCTGGGACAAGACAATAAAGTAAACACTAATTCGTTGATTCTTAGTTTATCTTCAAGTCATTTGAACATTCTGTGACATTTATATTCTCTTCTATATGAGTTGCACATTTTCATTATTAGAGCTCAGTTCATTGTTGTGGAACATTGCAAACATTCTGTGTCAGTTTAACACAATTTGTCTTGCTTGGCTGTTTTGATCTTGTTTCATTCGTTCATGTGGGCATGTGTTTGTTCAAATTAAGGCATGGGTATGCCAGATGTGTGGCTTTGACCTCTGCTTTTTTATGGTATGTTTTGATGTTATGTGTTGATGTAGTATTGCTCCCTAATTTTTTCCTCTAATGTTTTCATTGGGATATGGTTCTGTTAGGAACCAATGTAGTATGGGCTACCTTTGTCCCACATTGGTTAGAATGGAATGACCAATGTGGTACTTAAGGGCTTGGCTCTCCCACCTCAATAGCTAGTTGTTGATGTGTGGTTCTCTAAGGTGCTTAAGTACCTAACAGTTTCATCCTAAGATTAACTATGAATATGAGTGTACATTTGGTTTTAGCATGAAATCATATGCTGGATCATTTTAATTAGTCAGATTCATCTCATTAAGATGTTGCTGGAAACAAGCATGTTCATATCCATGGAGCACCGAGCACCTGACTCTCTCTCTCTCAGCATTTGCTCTTGGTTTGATATTCTGGAACTTGTGTCTTGCCAGTCACTTGTTAATACAATGAAGAATATCAAATGTGCCCTTTAGAGGCAGACAATTTATCGATTTCTGGTCTACATGTTCATTCTTTGCCTTCTGCTTGTCTACCATGTGAAAGAGTAATCTTAGATAGTGGTGAATTACCTATGTGTTCTAATTATGACGAAACTTCTTTTATGGGTTTTCTATCAATTCAGATACTGGGATACAAGGCAGCCAAACCCAGTACTTACACAACAACTTCCTGATCGTTGTTATTCAATGGCAGTGAGACATCCGCTAATGGTAGTTGGTACTGCAGATAGAAATCTCATAGTATTTGACCTTCGAGCTCCTCAGGTGTTGTTTTCTATTTTCTCTATCATCTCTCTCTATCTCTACCTCTAATGTAATAGCTAAAGTTGTTTAGAATATTATGTAAATTTCAATTTTTGACATTTGTTTATAGGGTCTTTCTGACTTCTTTTAAATGCCATTTTTCTTTTTATCTTTCATATTTCAACTCTAACCCAGTTAAGTGGTGACAGAGTGAACGTAAGAGAATTGTTTCACCCTTGAAGTATCAAACAAGATGTGTAGCTGCCTTTCCTGATCGGGAAGGTTTCTTGGTAATACTTCCATCCCTTGTATTCATTTGTTTAAATGTTTACTTTCCTTCAAGTAGAATTCTTTTATTCTATCTTGTCGATACTTTAGTTACTACTTCTTCAAGGTTCTTATTTCTTTACGCAATCAAGTCAATTTACTCATATTGTGAAATTGCTTGATCTGATTTCATTAACTATTCCAGGTTGGTTCAATAGAGGGAAGGGTTGGTGTCCATCACCTTGACGAGTCTATGGCAAATAAGAACTTCACTTTCAAGTGCCACAGGGATGGGTCTGAGATATATTCTGTCAACTCCTTGAACTTCCATCCTGTAAGTTTAGAATGTATTAAGTTATTTATTTATTGCAGCATAAAAAAATCCAAGAGACTCCAAAACTTTAACACAAAATTCCAAAAATACAGCTACCGCCTCCTTCAAGATAAAAGGAAACCTACCTACCAATTATTGTACGATGGGTTCAATGAAAAACATATATATGTAGGTGGAGTTCAAATCCTGGATCTTTCTACCTCCAATCAAGATGAGTCATCAATTAGATGCTAAAGATTACAAGCTTCCTTCACTTCCTCATCTCAAACATTTATTTCAGTGATGATCATCCACCATGGATGGCTTGCATCTCCTGATCTTTTAGTTTTAATAATACTTTCCAAAATCTTCTTTTCCATGGTTTCTAAATTCCAACCATCACTTTATGCCATTGGTTGTTTAGTTCTCTAAGAAATCTCTAAACCATTTGGCCAATGAAAAGATTATCCTTTTTTTTTTCCTTTAAATTTCCGACTCTCAACTGTCACTACATAAAAGCTTATCGTTCATCCAACTAGTTACTTGACGTATTCTCTTCATTTCCCCTCCAAAGAAATGCGCTCGACCCTTTCCATTTCTGCCACCTGCATTTGGCAAACGGGCTTATAATATTCAGGGAGGTTAGAAAGTACTGCATTACATGGAATCATCCTTCCAGCCTAGACTAGCAAAAATTGCTTCATGTATCAACTTTTCCTTGTGGTTATTTCTATAATAGGAGTTGGACCTAGGGAAAAAAAAAAGAAAGAAAGAAAAAAGCACCCCAAAGACATCTCCAACTATGTAAAAAGAAGACATTCTTACCTATAGTGGACTGTTGTTGACTATTTTTAAGATGGCAAGTATGTTTTCTTATTGGTGTGCTCTTGGAGTGGTTATTTTCTAAATTTAATGATTATTAATAGCAATTAACTATAGTTTGTTGTATCTTGATCTATGGTTTTTTGATCTTGCTGTTAATTGAACTGCACTTTCTTTCAGGTGCATCACACTTTTGCAACTGCAGGGTCGGATGGTGCTTTTAATTTCTGGGACAAGGATAGCAAACAGAGGCTTAAGGTTCCTCAGATTTTTATTAGATTTTTAACTGCATAATCCTCAGTCTTTTTCCATATTTATAAAATAGCTTGTGGTTGCATGGGAACTACGTTTATAAACAACTTTCTGACCCAGAACTTGTTTGGTGGGATAATGCTCCAAAATAAATTGCCCCTAAGTTTGTGGCTCAATTTAATATTTTCATATTAAACTTCATTTCCAGTTATTAGCTTTATGAACAGAGAAGATCAGTATGTTAATTTACGACAAATATTATGAGGGGAAACTTAATATGCATTGATGTACTTGAATTAAATGAACCTATGCAATACCTTCAGTTCAGCATCTAAGTTTTTTTTATTGGCAGTTTGGCACGATTAAAAATCTATATTAACAGAGGGAAAGGAGGAAAGAGAAAAACTTGCTAGAACATGTCTGCATACAATTTGTTTTAGTTTTACGCCAAAAACTGAGGGGAAACTTAATATGCATTGATGTACTTGAATTAAATGAACCTATGCAATACCTTCAGTTCAGCATCTAAGTTTTTTTTATTGGCAGTTTGGCATGATTAAAAATCTATATTAACATGAGAGGGAAAGGAGGAAAGAGAAAAACTTGCAAGAACATGTCTGCATACAATTTGTTTTAGTTTTACAATTAGTTACTTCTGTAATAAAAAACTTAAGGCAAATTATTTGTCCTATCTCCCAACACCGAACTATAGAAAATGTACATCTCACGCTCATTTAAACTGTTCTATGTAGGTGTATGACTTTTAAGTGCCAGATAATACTACCTTTTCCTTTGATCTTATTCACTTCTTGAAAATATTATGAGGTTTATTCTTAATGAATGAATGGTGAATGGTTATCCTTTTTTGCTTTCAGGCAATGTTACGGTGTAGTCAGCCCATAAGTTGTAGCACTTTCAACCAGGATGGGTCGATATTTGCATATTCAGTACGTATCACCTTAATTATTATTATTTTTAATTTTTTAAATTGCTGATGCTTGCTGATGCTCGATTCTTTAATTCTGCCACCACCTTCCCCCTCAAAGGTTACACGAACACACCTATTATAAACCGTTATTTTCAACATGAATAGCAACGTGCATTTCATTAGATGTATATCAGTCATTTGATAGTAGGTTTGTAATTGTAGCAAATAGACTTCATGGGTTGAGGGTTGGGAAAATAGTAGATAAACATTCCAAATAGTTCGTAAGTGGGGCCTATGGGAGAGCTTCTGAATTTCTTCATCATCTTTTAAGCTTTTTCTTTGTTCCCACTACAGTGTCTTTCTTTCAAATTCCTACCACGCCTCAACCCACCTGACGTGATTGAAAATATTTTAGAACCCAATGTGTGGAACTGCAAGTTATACGAATAACTTGGTGTTTCATGTCTATTACCTTTACCGTAACTGTTGTACATATGATATGGTATTCCTTGGGACTGAAATCTCGTGCTAGCGAACACTAGAAAGTTGTTATAAGTGAGCTGAATTCAACATGTGGAATTTGTATAGGTGTGCTACGATTGGAGTAAGGGGGCAGAAAATCACAACCCAGCAACAGCAAAGACTTACATTTACTTGCACCTCCCACAGGTACTTAGTGGTGTGGATAATTTTTTTATTTTTTTAATTTTTTTTTCCAGTTCTGAATTTTGCGTTTTGGATGTAGGAGGCTGAGGTTAAAGGCAAGCCTCGTGTTGGGGGCGGCGGAAGAAAGTAGTCCCTGTAAAATCCCTTTGCATGTATCTTTGTTGTTCTCTAATGTCAAATTACTAATAGGTTTAACTAGGCTTCCAAAAATCTTGAATATATTTCTAGTTTAGTACATAGACTATTTTTTGTATGATTGGAAAATAGTGAATTATCAAATACTTGAGAGATATCTACAGTTGGAATAGATGTTCATAAATGTTTGAAATCTCTGAGCAATCATGGTTTTTAGAAAAAAAACTGTAGGATGTATGAGAATATCACCTATGTTTCATAGGACTTATT

mRNA sequence

AAAAAAAAAAAGAAATCTTTTCTTCTCCGCTGCTGCAAGGTTAACTTCTCAGTTTGCGTGCAAGGTTACTAACTCCTCTGCTCTTCTCCGCCGCTGCTCGCCACAGCTCGCCAGCCGTCTCCGATTGTCGTTCACCAGCCGCTTTCGTTCGACGTCAGCCGCCGCCTCCGTCTGCGTTCGTGCGTGCGCCGTTGCACTTGCCTGCCACCGGCCACATCTCCTCTGCTAGCGCCGACAGCGTCCCCTCCGCTTGTGCCAACCGCCGCCAACCTTCCAGCGCCGCCGTTTCACGGTGGGTTCGCCAGATTCTTGTCGTTTTGGTAAATTTCAGTATTTCGTGAGTTTTCTTGGAGGTTATTGAATACCTTTTGATTCTTTGCCTTATTTGGTGGTTCCTAATGCGAATTGGTTTTAAATTGAAAATTGGGAACTTTTGGAGCCACTGTCCAACAACGTTAATGATCGATTTTTTCGATTTCAGATCAATTTTGGTTGGAATTTGAAGTTTGGAAGAAGAGTATTGGGACCTAATTGTATTTTGGATAGCTTCGAATGTCTGCATTTGCGAACCCCAATCCTAATAAATCCTTTGAGGTTGCTCAGCCTCCTAGTGATTCTGTGTCGAGCCTTAGTTTTAGTCCAAAGGCCAATCACTTGGTTGCGACTTCATGGGATAATCAGGTTCGTTGTTGGGAAATAATGCAAAATGCAGGTAATGTTGTCAGCACGCCTAAGGCTTTTATATCCCACGATCAACCGGATGATGGAACGACTGTGTTTTCTGGAGGCTGCGATAAACAAGTTAAAATGTGGCCCTTATTGTCAGGTGGTCAAGCCATGACGATAGCCATGCATGAAGCACCCGTCAAAGAAGTTGCTTGGATCCCTGAGTTGAGCCTATTGGCCTCTGGAAGCTGGGACAAGACAATAAAATACTGGGATACAAGGCAGCCAAACCCAGTACTTACACAACAACTTCCTGATCGTTGTTATTCAATGGCAGTGAGACATCCGCTAATGGTAGTTGGTACTGCAGATAGAAATCTCATAGTATTTGACCTTCGAGCTCCTCAGAGTGAACGTAAGAGAATTGTTTCACCCTTGAAGTATCAAACAAGATGTGTAGCTGCCTTTCCTGATCGGGAAGGTTTCTTGGTTGGTTCAATAGAGGGAAGGGTTGGTGTCCATCACCTTGACGAGTCTATGGCAAATAAGAACTTCACTTTCAAGTGCCACAGGGATGGGTCTGAGATATATTCTGTCAACTCCTTGAACTTCCATCCTTTACTTGACGTATTCTCTTCATTTCCCCTCCAAAGAAATGCGCTCGACCCTTTCCATTTCTGCCACCTGCATTTGGCAAACGGGCTTATAATATTCAGGGAGGTGCATCACACTTTTGCAACTGCAGGGTCGGATGGTGCTTTTAATTTCTGGGACAAGGATAGCAAACAGAGGCTTAAGGCAATGTTACGGTGTAGTCAGCCCATAAGTTGTAGCACTTTCAACCAGGATGGGTCGATATTTGCATATTCAAACCCAATGTGTGGAACTGCAAGTTATACGAATAACTTGGTGTTTCATGTCTATTACCTTTACCGTAACTGTTGTACATATGATATGGTGTGCTACGATTGGAGTAAGGGGGCAGAAAATCACAACCCAGCAACAGCAAAGACTTACATTTACTTGCACCTCCCACAGGAGGCTGAGGTTAAAGGCAAGCCTCGTGTTGGGGGCGGCGGAAGAAAGTAGTCCCTGTAAAATCCCTTTGCATGTATCTTTGTTGTTCTCTAATGTCAAATTACTAATAGGTTTAACTAGGCTTCCAAAAATCTTGAATATATTTCTAGTTTAGTACATAGACTATTTTTTGTATGATTGGAAAATAGTGAATTATCAAATACTTGAGAGATATCTACAGTTGGAATAGATGTTCATAAATGTTTGAAATCTCTGAGCAATCATGGTTTTTAGAAAAAAAACTGTAGGATGTATGAGAATATCACCTATGTTTCATAGGACTTATT

Coding sequence (CDS)

ATGTCTGCATTTGCGAACCCCAATCCTAATAAATCCTTTGAGGTTGCTCAGCCTCCTAGTGATTCTGTGTCGAGCCTTAGTTTTAGTCCAAAGGCCAATCACTTGGTTGCGACTTCATGGGATAATCAGGTTCGTTGTTGGGAAATAATGCAAAATGCAGGTAATGTTGTCAGCACGCCTAAGGCTTTTATATCCCACGATCAACCGGATGATGGAACGACTGTGTTTTCTGGAGGCTGCGATAAACAAGTTAAAATGTGGCCCTTATTGTCAGGTGGTCAAGCCATGACGATAGCCATGCATGAAGCACCCGTCAAAGAAGTTGCTTGGATCCCTGAGTTGAGCCTATTGGCCTCTGGAAGCTGGGACAAGACAATAAAATACTGGGATACAAGGCAGCCAAACCCAGTACTTACACAACAACTTCCTGATCGTTGTTATTCAATGGCAGTGAGACATCCGCTAATGGTAGTTGGTACTGCAGATAGAAATCTCATAGTATTTGACCTTCGAGCTCCTCAGAGTGAACGTAAGAGAATTGTTTCACCCTTGAAGTATCAAACAAGATGTGTAGCTGCCTTTCCTGATCGGGAAGGTTTCTTGGTTGGTTCAATAGAGGGAAGGGTTGGTGTCCATCACCTTGACGAGTCTATGGCAAATAAGAACTTCACTTTCAAGTGCCACAGGGATGGGTCTGAGATATATTCTGTCAACTCCTTGAACTTCCATCCTTTACTTGACGTATTCTCTTCATTTCCCCTCCAAAGAAATGCGCTCGACCCTTTCCATTTCTGCCACCTGCATTTGGCAAACGGGCTTATAATATTCAGGGAGGTGCATCACACTTTTGCAACTGCAGGGTCGGATGGTGCTTTTAATTTCTGGGACAAGGATAGCAAACAGAGGCTTAAGGCAATGTTACGGTGTAGTCAGCCCATAAGTTGTAGCACTTTCAACCAGGATGGGTCGATATTTGCATATTCAAACCCAATGTGTGGAACTGCAAGTTATACGAATAACTTGGTGTTTCATGTCTATTACCTTTACCGTAACTGTTGTACATATGATATGGTGTGCTACGATTGGAGTAAGGGGGCAGAAAATCACAACCCAGCAACAGCAAAGACTTACATTTACTTGCACCTCCCACAGGAGGCTGAGGTTAAAGGCAAGCCTCGTGTTGGGGGCGGCGGAAGAAAGTAG

Protein sequence

MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPDDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQSERKRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIYSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCCTYDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK
Homology
[Close]
BLAST of ClCG08G001160 vs. Swiss-Prot
Match: RAE1_ARATH (Protein RAE1 OS=Arabidopsis thaliana GN=RAE1 PE=1 SV=2)

HSP 1 Score: 497.7 bits (1280), Expect = 1.2e-139
Identity = 251/405 (61.98%), Postives = 288/405 (71.11%), Query Frame = 1 

Query: 3   AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKA 62
           A AN NPNKS+EV   P+DS+SSLSFSP+A+ LVATSWDNQVRCWEI ++  ++ S PKA
Sbjct: 8   ATANSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKA 67

Query: 63  FISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPELS 122
            ISHDQP       DDGTTVFSGGCDKQ KMWPLLSGGQ +T+AMHE P+  +AWIP ++
Sbjct: 68  SISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMN 127

Query: 123 LLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQS 182
           LLA+GSWDKT+KYWDTRQ NPV TQQLPD+CY+++V+HPLMVVGTADRNLIVF+L+ PQ+
Sbjct: 128 LLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQT 187

Query: 183 ERKRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIY 242
           E KRI SPLKYQTRCV AFPD++GFLVGSIEGRVGVHHLD+S  +KNFTFKC        
Sbjct: 188 EFKRIQSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKC-------- 247

Query: 243 SVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFNFW 302
                               R+  D +    L+       F  VH TFATAGSDGAFNFW
Sbjct: 248 -------------------HRDGNDIYSVNSLN-------FHPVHGTFATAGSDGAFNFW 307

Query: 303 DKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCCTY 362
           DKDSKQRLKAM RC+QPI CS+FN DGSI+AY+                           
Sbjct: 308 DKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAYA--------------------------- 349

Query: 363 DMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
              CYDWSKGAENHNPATAK+ I+LHLPQE+EVK KPRVG  GRK
Sbjct: 368 --ACYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPRVGATGRK 349

[Close]
BLAST of ClCG08G001160 vs. Swiss-Prot
Match: RAE1L_XENTR (mRNA export factor OS=Xenopus tropicalis GN=rae1 PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 7.0e-79
Identity = 177/409 (43.28%), Postives = 224/409 (54.77%), Query Frame = 1 

Query: 2   SAFANPNPNKSFEVAQPPSDSVSSLSFSPKA---NHLVATSWDNQVRCWEIMQNAGNVVS 61
           +A  N NP K  EV  PP DS+S LSFSP     N L+A SW N VRCWE+  N   +  
Sbjct: 21  TATDNHNPMKDIEVTSPPDDSISCLSFSPPTLPGNFLIAGSWANDVRCWEVQDNGQTI-- 80

Query: 62  TPKAFISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWI 121
            PKA   H  P       DDG+ VF+  CDK  KMW L S  Q++ IA H+AP+K V W+
Sbjct: 81  -PKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QSIQIAQHDAPIKTVHWV 140

Query: 122 --PELSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFD 181
             P  S + +GSWDK++K+WDTR PNP+LT QLP+RCY   V +P+ VV TA+R LIV+ 
Sbjct: 141 KAPNYSCIMTGSWDKSLKFWDTRSPNPLLTLQLPERCYCADVVYPMAVVATAERGLIVYQ 200

Query: 182 LRAPQSERKRIVSPLKYQTRCVAAFPDRE----GFLVGSIEGRVGVHHLDE-SMANKNFT 241
           L    SE +RI SPLK+Q RCVA F D++    GF +GSIEGRV +H+++  + A  NFT
Sbjct: 201 LENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT 260

Query: 242 FKCHRDGSEIYSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFA 301
           FKCHR        N  N     D+++                    NG I F  VH T A
Sbjct: 261 FKCHRS-------NGTNTTAPQDIYA-------------------VNG-IAFHPVHGTLA 320

Query: 302 TAGSDGAFNFWDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFH 361
           T GSDG F+FWDKD++ +LK   +  QPIS  +FN +G+IFAYS+               
Sbjct: 321 TVGSDGRFSFWDKDARTKLKTSEQLDQPISACSFNHNGNIFAYSS--------------- 365

Query: 362 VYYLYRNCCTYDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR 394
                          YDWSKG E +NP   K YI+L   + A  + KPR
Sbjct: 381 --------------SYDWSKGHEFYNP-QKKNYIFL---RNAAEELKPR 365

[Close]
BLAST of ClCG08G001160 vs. Swiss-Prot
Match: RAE1L_HUMAN (mRNA export factor OS=Homo sapiens GN=RAE1 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.3e-76
Identity = 174/405 (42.96%), Postives = 220/405 (54.32%), Query Frame = 1 

Query: 6   NPNPNKSFEVAQPPSDSVSSLSFSPKA---NHLVATSWDNQVRCWEIMQNAGNVVSTPKA 65
           N NP K  EV   P DS+  LSFSP     N L+A SW N VRCWE+ Q++G  +  PKA
Sbjct: 25  NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEV-QDSGQTI--PKA 84

Query: 66  FISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWI--PE 125
              H  P       DDG+ VF+  CDK  KMW L S  QA+ IA H+APVK + WI  P 
Sbjct: 85  QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPN 144

Query: 126 LSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAP 185
            S + +GSWDKT+K+WDTR  NP++  QLP+RCY   V +P+ VV TA+R LIV+ L   
Sbjct: 145 YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQ 204

Query: 186 QSERKRIVSPLKYQTRCVAAFPDRE----GFLVGSIEGRVGVHHLDE-SMANKNFTFKCH 245
            SE +RI SPLK+Q RCVA F D++    GF +GSIEGRV +H+++  + A  NFTFKCH
Sbjct: 205 PSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCH 264

Query: 246 RDGSEIYSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGS 305
           R        N  N     D+++                    NG I F  VH T AT GS
Sbjct: 265 RS-------NGTNTSAPQDIYA-------------------VNG-IAFHPVHGTLATVGS 324

Query: 306 DGAFNFWDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYL 365
           DG F+FWDKD++ +LK   +  QPIS   FN +G+IFAY++                   
Sbjct: 325 DGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYAS------------------- 365

Query: 366 YRNCCTYDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR 394
                      YDWSKG E +NP   K YI+L   + A  + KPR
Sbjct: 385 ----------SYDWSKGHEFYNP-QKKNYIFL---RNAAEELKPR 365

[Close]
BLAST of ClCG08G001160 vs. Swiss-Prot
Match: RAEL1_PONAB (mRNA export factor OS=Pongo abelii GN=RAE1 PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.3e-76
Identity = 174/405 (42.96%), Postives = 220/405 (54.32%), Query Frame = 1 

Query: 6   NPNPNKSFEVAQPPSDSVSSLSFSPKA---NHLVATSWDNQVRCWEIMQNAGNVVSTPKA 65
           N NP K  EV   P DS+  LSFSP     N L+A SW N VRCWE+ Q++G  +  PKA
Sbjct: 25  NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEV-QDSGQTI--PKA 84

Query: 66  FISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWI--PE 125
              H  P       DDG+ VF+  CDK  KMW L S  QA+ IA H+APVK + WI  P 
Sbjct: 85  QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPN 144

Query: 126 LSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAP 185
            S + +GSWDKT+K+WDTR  NP++  QLP+RCY   V +P+ VV TA+R LIV+ L   
Sbjct: 145 YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQ 204

Query: 186 QSERKRIVSPLKYQTRCVAAFPDRE----GFLVGSIEGRVGVHHLDE-SMANKNFTFKCH 245
            SE +RI SPLK+Q RCVA F D++    GF +GSIEGRV +H+++  + A  NFTFKCH
Sbjct: 205 PSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCH 264

Query: 246 RDGSEIYSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGS 305
           R        N  N     D+++                    NG I F  VH T AT GS
Sbjct: 265 RS-------NGTNTSAPQDIYA-------------------VNG-IAFHPVHGTLATVGS 324

Query: 306 DGAFNFWDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYL 365
           DG F+FWDKD++ +LK   +  QPIS   FN +G+IFAY++                   
Sbjct: 325 DGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYAS------------------- 365

Query: 366 YRNCCTYDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR 394
                      YDWSKG E +NP   K YI+L   + A  + KPR
Sbjct: 385 ----------SYDWSKGHEFYNP-QKKNYIFL---RNAAEELKPR 365

[Close]
BLAST of ClCG08G001160 vs. Swiss-Prot
Match: RAE1L_BOVIN (mRNA export factor OS=Bos taurus GN=RAE1 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 5.6e-76
Identity = 175/405 (43.21%), Postives = 220/405 (54.32%), Query Frame = 1 

Query: 6   NPNPNKSFEVAQPPSDSVSSLSFSPKA---NHLVATSWDNQVRCWEIMQNAGNVVSTPKA 65
           N NP K  EV   P DS+  LSFSP     N L+A SW N VRCWE+ Q++G  +  PKA
Sbjct: 25  NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEV-QDSGQTI--PKA 84

Query: 66  FISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWI--PE 125
              H  P       DDG+ VF+  CDK  KMW L S  QA+ IA H+APVK V WI  P 
Sbjct: 85  QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTVHWIKAPN 144

Query: 126 LSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAP 185
            S + +GSWDKT+K+WDTR  NP++  QLP+RCY   V +P+ VV TA+R LIV+ L   
Sbjct: 145 YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQ 204

Query: 186 QSERKRIVSPLKYQTRCVAAFPDRE----GFLVGSIEGRVGVHHLDE-SMANKNFTFKCH 245
            SE +RI SPLK+Q RCVA F D++    GF +GSIEGRV +H+++  + A  NFTFKCH
Sbjct: 205 PSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCH 264

Query: 246 RDGSEIYSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGS 305
           R        N  N     D+++                    NG I F  VH T AT GS
Sbjct: 265 RS-------NGTNTSAPQDIYA-------------------VNG-IAFHPVHGTLATVGS 324

Query: 306 DGAFNFWDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYL 365
           DG F+FWDKD++ +LK   +  QPIS   FN +G+IFAY++                   
Sbjct: 325 DGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYAS------------------- 365

Query: 366 YRNCCTYDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPR 394
                      YDWSKG E +NP   K YI+L   + A  + KPR
Sbjct: 385 ----------SYDWSKGHEFYNP-QKKNYIFL---RNAAEELKPR 365

[Close]
BLAST of ClCG08G001160 vs. TrEMBL
Match: A0A0A0KXV7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649250 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 1.6e-167
Identity = 305/407 (74.94%), Postives = 320/407 (78.62%), Query Frame = 1 

Query: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTP 60
           M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ STP
Sbjct: 1   MAAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNLASTP 60

Query: 61  KAFISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPE 120
           KA ISHDQP       DDGTTVFSGGCDKQVKMWPLLSGGQAMT+AMH+APVKEVAWIPE
Sbjct: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHDAPVKEVAWIPE 120

Query: 121 LSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAP 180
           L+LL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSMAVRHPLMVVGTADRNLIVF+L+ P
Sbjct: 121 LNLLVSGSWDKTLKYWDTRQPNPVHTQQLPDRCYSMAVRHPLMVVGTADRNLIVFNLQNP 180

Query: 181 QSERKRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240
           QSE KRIVSPLKYQTRCVAAFPD++GFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE
Sbjct: 181 QSEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240

Query: 241 IYSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFN 300
           IYSVNSLNFHP+   F++      +   F+F                             
Sbjct: 241 IYSVNSLNFHPVHHTFAT----AGSDGAFNFW---------------------------- 300

Query: 301 FWDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCC 360
             DKDSKQRLKAM RCSQPISCSTFNQDGSIFAYS                         
Sbjct: 301 --DKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYS------------------------- 344

Query: 361 TYDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
               VCYDWSKGAENHNPATAKTYIYLHLPQE EVKGKPRVGGGGRK
Sbjct: 361 ----VCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 344

[Close]
BLAST of ClCG08G001160 vs. TrEMBL
Match: A0A067L422_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27016 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 2.8e-151
Identity = 272/406 (67.00%), Postives = 304/406 (74.88%), Query Frame = 1 

Query: 2   SAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPK 61
           +A ANPNPNKSFEVAQPPSDSVSSLSFSPKANHL+ATSWDNQVRCWEI ++   V S PK
Sbjct: 7   AAAANPNPNKSFEVAQPPSDSVSSLSFSPKANHLIATSWDNQVRCWEITRSGTTVASVPK 66

Query: 62  AFISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPEL 121
           A I+HDQP       DDGTTVFSGGCDKQVKMWPLLSGGQ +T+A H+AP+KE+AWIPE+
Sbjct: 67  ASITHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAAHDAPIKEIAWIPEI 126

Query: 122 SLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ 181
           +LLA+GSWDKT++YWDTRQPNPVLTQQLP+RCY+M VRHPLMVVGTADRNLIVF+L+ PQ
Sbjct: 127 NLLATGSWDKTLRYWDTRQPNPVLTQQLPERCYAMTVRHPLMVVGTADRNLIVFNLQQPQ 186

Query: 182 SERKRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEI 241
           +E KRIVSPLKYQTRCVAAFPD++GFLVGSIEGRVGVHHLD++  +KNFTFKCHRDG+EI
Sbjct: 187 NEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHRDGNEI 246

Query: 242 YSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFNF 301
           YSVNSLNFHP+   F++      +   F+F                              
Sbjct: 247 YSVNSLNFHPVHHTFAT----AGSDGAFNFW----------------------------- 306

Query: 302 WDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCCT 361
            DKDSKQRLKAM RC  PI CSTFN DGSIFAYS                          
Sbjct: 307 -DKDSKQRLKAMTRCPLPIPCSTFNNDGSIFAYS-------------------------- 349

Query: 362 YDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
              VCYDWSKGAENHNP TAKTYIYLHLPQE+EVKGKPRVG  GRK
Sbjct: 367 ---VCYDWSKGAENHNPQTAKTYIYLHLPQESEVKGKPRVGASGRK 349

[Close]
BLAST of ClCG08G001160 vs. TrEMBL
Match: D7STD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00900 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 8.2e-151
Identity = 274/403 (67.99%), Postives = 303/403 (75.19%), Query Frame = 1 

Query: 5   ANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFI 64
           +NPNPNKS EVAQPPSDSVSSLSFSPKAN LVATSWDNQVRCWEIM+N   V S PKA I
Sbjct: 11  SNPNPNKSIEVAQPPSDSVSSLSFSPKANILVATSWDNQVRCWEIMRNGPTVGSVPKASI 70

Query: 65  SHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPELSLL 124
           SHDQP       DDGTTVFSGGCDKQVKMWPLLSGGQ MT+AMH+AP+KEVAWIPE++LL
Sbjct: 71  SHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKEVAWIPEMNLL 130

Query: 125 ASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQSER 184
           A+GSWDKT+KYWDTRQPNPV TQQLPDRCY++ VRHPLMVVGTADRNLIVF+L+ PQ+E 
Sbjct: 131 ATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIVFNLQNPQTEF 190

Query: 185 KRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIYSV 244
           KRI SPLKYQTRCVAAFPD++GFLVGSIEGRVGVHHLD++  +KNFTFKCHR+G+EIYSV
Sbjct: 191 KRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHREGNEIYSV 250

Query: 245 NSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFNFWDK 304
           NSLNFHP+   F++      +   F+F                               DK
Sbjct: 251 NSLNFHPVHHTFAT----AGSDGAFNFW------------------------------DK 310

Query: 305 DSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCCTYDM 364
           DSKQRLKAM RCSQPI CSTFN DGSIFAYS                             
Sbjct: 311 DSKQRLKAMSRCSQPIPCSTFNNDGSIFAYS----------------------------- 350

Query: 365 VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
           VCYDWSKGAENHNPATAK+YI+LHLPQEAEVKGKPR+G  GRK
Sbjct: 371 VCYDWSKGAENHNPATAKSYIFLHLPQEAEVKGKPRIGTSGRK 350

[Close]
BLAST of ClCG08G001160 vs. TrEMBL
Match: A0A061G7Z1_THECC (Transducin/WD40 repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_027395 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.8e-150
Identity = 274/406 (67.49%), Postives = 303/406 (74.63%), Query Frame = 1 

Query: 2   SAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPK 61
           +A AN NPNKSFEV QPPSDSVSSLSFSPKAN LVATSWDNQVRCWEI +N   V STPK
Sbjct: 6   AAAANHNPNKSFEVLQPPSDSVSSLSFSPKANILVATSWDNQVRCWEISRNGTAVASTPK 65

Query: 62  AFISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPEL 121
           A I+HDQP       DDGTTVFSGGCDKQVKMWPLLSGGQ MT+AMH+AP+KEVAWIPE+
Sbjct: 66  ASITHDQPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKEVAWIPEM 125

Query: 122 SLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ 181
           +LL +GSWDKT+KYWDTRQPNPV TQQLPDRCY++ V++PLMVVGTADRNLIVF+L+ PQ
Sbjct: 126 NLLVTGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVKYPLMVVGTADRNLIVFNLQNPQ 185

Query: 182 SERKRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEI 241
           +E KR+VSPLKYQTRCVAAFPD++GFLVGSIEGRVGVHHLD+   NKNFTFKCHRDGSEI
Sbjct: 186 TEYKRVVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDGQQNKNFTFKCHRDGSEI 245

Query: 242 YSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFNF 301
           YSVNSLNFHP+   F++      +   F+F                              
Sbjct: 246 YSVNSLNFHPIHHTFAT----AGSDGAFNFW----------------------------- 305

Query: 302 WDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCCT 361
            DKDSKQRLKAM RCSQPI CSTFN DGSIFAYS                          
Sbjct: 306 -DKDSKQRLKAMSRCSQPIPCSTFNNDGSIFAYS-------------------------- 348

Query: 362 YDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
              VCYDWSKGAENHNP+TAKTYI+LHLPQE+EVKGKPRVG  GRK
Sbjct: 366 ---VCYDWSKGAENHNPSTAKTYIFLHLPQESEVKGKPRVGTSGRK 348

[Close]
BLAST of ClCG08G001160 vs. TrEMBL
Match: W9RTQ8_9ROSA (Rae1-like protein OS=Morus notabilis GN=L484_004725 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 4.1e-150
Identity = 270/402 (67.16%), Postives = 301/402 (74.88%), Query Frame = 1 

Query: 6   NPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFIS 65
           NPNPN SFEV Q PSDSVSSL FSPKANHLVATSWDNQVRCWEIM+N   + STPKA IS
Sbjct: 11  NPNPNNSFEVTQAPSDSVSSLCFSPKANHLVATSWDNQVRCWEIMRNGNALGSTPKASIS 70

Query: 66  HDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPELSLLA 125
           H+QP       DDGTTVFSGGCDKQVKMWPLLSGGQ MT+AMH+AP+KEVAWIPE+SLL 
Sbjct: 71  HEQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKEVAWIPEMSLLV 130

Query: 126 SGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQSERK 185
           +GSWDKT+KYWDTRQPNPV TQQLPDRCY++ VRHPLMVVGTADRNLIVF+L+ PQ+E K
Sbjct: 131 TGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIVFNLQNPQTEFK 190

Query: 186 RIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIYSVN 245
           RI+SPLKYQTRC+AAFPD++GFL+GSIEGRVGVHHLD+S  +KNFTFKCHRDG+EIYSVN
Sbjct: 191 RIISPLKYQTRCIAAFPDQQGFLIGSIEGRVGVHHLDDSQQSKNFTFKCHRDGTEIYSVN 250

Query: 246 SLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFNFWDKD 305
           SLNFHP+   F++      +   F+F                               DKD
Sbjct: 251 SLNFHPVHQTFAT----AGSDGAFNFW------------------------------DKD 310

Query: 306 SKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCCTYDMV 365
           SKQRLKAM RCSQPI CSTFN DGSI+AYS                             V
Sbjct: 311 SKQRLKAMSRCSQPIPCSTFNNDGSIYAYS-----------------------------V 349

Query: 366 CYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
           CYDWSKGAENHNPATAKT+I+LHLPQE+EVKGKPRVG  GRK
Sbjct: 371 CYDWSKGAENHNPATAKTHIFLHLPQESEVKGKPRVGTSGRK 349

[Close]
BLAST of ClCG08G001160 vs. TAIR10
Match: AT1G80670.1 (AT1G80670.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 497.7 bits (1280), Expect = 6.9e-141
Identity = 251/405 (61.98%), Postives = 288/405 (71.11%), Query Frame = 1 

Query: 3   AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKA 62
           A AN NPNKS+EV   P+DS+SSLSFSP+A+ LVATSWDNQVRCWEI ++  ++ S PKA
Sbjct: 8   ATANSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKA 67

Query: 63  FISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPELS 122
            ISHDQP       DDGTTVFSGGCDKQ KMWPLLSGGQ +T+AMHE P+  +AWIP ++
Sbjct: 68  SISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMN 127

Query: 123 LLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQS 182
           LLA+GSWDKT+KYWDTRQ NPV TQQLPD+CY+++V+HPLMVVGTADRNLIVF+L+ PQ+
Sbjct: 128 LLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQT 187

Query: 183 ERKRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIY 242
           E KRI SPLKYQTRCV AFPD++GFLVGSIEGRVGVHHLD+S  +KNFTFKC        
Sbjct: 188 EFKRIQSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKC-------- 247

Query: 243 SVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFNFW 302
                               R+  D +    L+       F  VH TFATAGSDGAFNFW
Sbjct: 248 -------------------HRDGNDIYSVNSLN-------FHPVHGTFATAGSDGAFNFW 307

Query: 303 DKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCCTY 362
           DKDSKQRLKAM RC+QPI CS+FN DGSI+AY+                           
Sbjct: 308 DKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAYA--------------------------- 349

Query: 363 DMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
              CYDWSKGAENHNPATAK+ I+LHLPQE+EVK KPRVG  GRK
Sbjct: 368 --ACYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPRVGATGRK 349

[Close]
BLAST of ClCG08G001160 vs. TAIR10
Match: AT1G15850.1 (AT1G15850.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 179.1 bits (453), Expect = 5.4e-45
Identity = 81/127 (63.78%), Postives = 98/127 (77.17%), Query Frame = 1 

Query: 8   NPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHD 67
           NPN S+E+  P +DS+SSLSFSPKA+ LVATSWD QVRCWEI ++ G++ S PK  +SHD
Sbjct: 14  NPNNSYEITPPATDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHD 73

Query: 68  QP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPELSLLASG 127
           QP       DDGTTVF+GGCDKQ KMWPLLSG Q  T+AMH+AP  ++AWIP ++LL +G
Sbjct: 74  QPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTG 133

[Close]
BLAST of ClCG08G001160 vs. TAIR10
Match: AT3G19590.1 (AT3G19590.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-35
Identity = 86/254 (33.86%), Postives = 135/254 (53.15%), Query Frame = 1 

Query: 9   PNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQ 68
           P+   E++ PPSD +S+L FS  ++HL+ +SWD +VR +++  N+          +    
Sbjct: 6   PSAGRELSNPPSDGISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFLHGGAVLDCC 65

Query: 69  PDDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPELSLLASGSWDKTIKY 128
             D  + FS G D +V+   + + G+   +  H+  V+ V +      + +GSWDKT+K 
Sbjct: 66  FHDDFSGFSVGADYKVRRI-VFNVGKEDILGTHDKAVRCVEYSYAAGQVITGSWDKTVKC 125

Query: 129 WDTR-----QPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQSERKRIVSP 188
           WD R     +   V T   P+R YSM++    +VV TA R++ ++DLR      +R  S 
Sbjct: 126 WDPRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSQPEQRRESS 185

Query: 189 LKYQTRCVAAFPDREGFLVGSIEGRVGVHHLD--ESMANKNFTFKCHRDGSE----IYSV 248
           LKYQTRCV  +P+  G+ + S+EGRV +   D  E+   K + FKCHR        +Y V
Sbjct: 186 LKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAAQAKKYAFKCHRKSEAGRDIVYPV 245

Query: 249 NSLNFHPLLDVFSS 252
           NS+ FHP+   F++
Sbjct: 246 NSIAFHPIYGTFAT 258

[Close]
BLAST of ClCG08G001160 vs. TAIR10
Match: AT1G49910.1 (AT1G49910.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 141.7 bits (356), Expect = 9.5e-34
Identity = 86/249 (34.54%), Postives = 132/249 (53.01%), Query Frame = 1 

Query: 14  EVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPDDGT 73
           E++ PPSD +S+L FS  ++HL+ +SWD  VR ++   +           +      D +
Sbjct: 10  ELSNPPSDGISNLRFSNNSDHLLVSSWDKSVRLYDANGDLMRGEFKHGGAVLDCCFHDDS 69

Query: 74  TVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTR- 133
           + FS   D +V+     + G+   +  HE PV+ V +      + +GSWDKTIK WD R 
Sbjct: 70  SGFSVCADTKVRRIDF-NAGKEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRG 129

Query: 134 ----QPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQSERKRIVSPLKYQT 193
               +   + T   P+R  S+++    +VV TA R++ ++DLR      +R  S LKYQT
Sbjct: 130 ASGTERTQIGTYMQPERVNSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQT 189

Query: 194 RCVAAFPDREGFLVGSIEGRVGVHHLD--ESMANKNFTFKCHR---DGSEI-YSVNSLNF 252
           RCV  +P+  G+ + S+EGRV +   D  E+   K + FKCHR   DG +I Y VN++ F
Sbjct: 190 RCVRCYPNGTGYALSSVEGRVSMEFFDLSEAAQAKKYAFKCHRKSEDGRDIVYPVNAIAF 249

[Close]
BLAST of ClCG08G001160 vs. TAIR10
Match: AT1G69400.1 (AT1G69400.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 95.9 bits (237), Expect = 6.0e-20
Identity = 61/236 (25.85%), Postives = 117/236 (49.58%), Query Frame = 1 

Query: 14  EVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFISHDQPDDGT 73
           E   P  D+VS L FSP++N+L+  SWD+ +R +++  ++ ++    +A +     ++ +
Sbjct: 7   EFENPIEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCFENES 66

Query: 74  TVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPELSLLASGSWDKTIKYWDTRQ 133
           T F+ G D  ++ +  L+ G   TI  H+     + +  E   + S  +D+ IK+WDTRQ
Sbjct: 67  TSFTSGSDGFIRRYD-LNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQ 126

Query: 134 PNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQSERKRIVSPLKYQTRCVAA 193
              ++                  +V   D ++ ++DLR      +   S ++   RC+ +
Sbjct: 127 RESLVFSTDAGGAVGCVTVSGNNLVVCVDASMHIYDLRNLDEAFQSYASQVEVPIRCITS 186

Query: 194 FPDREGFLVGSIEGRVGVHHLDESMANK-NFTFKCH---RDGS-EIYSVNSLNFHP 245
            P   G+ VGS++GRV V   + S +++  ++F+CH   R+G  +   +N++ F P
Sbjct: 187 VPYSRGYAVGSVDGRVAVDFPNTSCSSEIKYSFRCHPKSRNGRLDGVCINAIEFSP 241

[Close]
BLAST of ClCG08G001160 vs. NCBI nr
Match: gi|659119292|ref|XP_008459578.1| (PREDICTED: rae1-like protein At1g80670 [Cucumis melo])

HSP 1 Score: 597.8 bits (1540), Expect = 1.4e-167
Identity = 305/407 (74.94%), Postives = 320/407 (78.62%), Query Frame = 1 

Query: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTP 60
           M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ STP
Sbjct: 1   MAAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNLASTP 60

Query: 61  KAFISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPE 120
           KA ISHDQP       DDGTTVFSGGCDKQVKMWPLLSGGQAMT+AMH+APVKEVAWIPE
Sbjct: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHDAPVKEVAWIPE 120

Query: 121 LSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAP 180
           L+LL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSMAVRHPLMVVGTADRNLIVF+L+ P
Sbjct: 121 LNLLVSGSWDKTLKYWDTRQPNPVHTQQLPDRCYSMAVRHPLMVVGTADRNLIVFNLQTP 180

Query: 181 QSERKRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240
           QSE KRIVSPLKYQTRCVAAFPD++GFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE
Sbjct: 181 QSEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240

Query: 241 IYSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFN 300
           IYSVNSLNFHP+   F++      +   F+F                             
Sbjct: 241 IYSVNSLNFHPVHHTFAT----AGSDGAFNFW---------------------------- 300

Query: 301 FWDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCC 360
             DKDSKQRLKAM RCSQPISCSTFNQDGSIFAYS                         
Sbjct: 301 --DKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYS------------------------- 344

Query: 361 TYDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
               VCYDWSKGAENHNPATAKTYIYLHLPQE EVKGKPRVGGGGRK
Sbjct: 361 ----VCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 344

[Close]
BLAST of ClCG08G001160 vs. NCBI nr
Match: gi|449447571|ref|XP_004141541.1| (PREDICTED: protein RAE1 [Cucumis sativus])

HSP 1 Score: 597.0 bits (1538), Expect = 2.4e-167
Identity = 305/407 (74.94%), Postives = 320/407 (78.62%), Query Frame = 1 

Query: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTP 60
           M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ STP
Sbjct: 1   MAAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNLASTP 60

Query: 61  KAFISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPE 120
           KA ISHDQP       DDGTTVFSGGCDKQVKMWPLLSGGQAMT+AMH+APVKEVAWIPE
Sbjct: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHDAPVKEVAWIPE 120

Query: 121 LSLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAP 180
           L+LL SGSWDKT+KYWDTRQPNPV TQQLPDRCYSMAVRHPLMVVGTADRNLIVF+L+ P
Sbjct: 121 LNLLVSGSWDKTLKYWDTRQPNPVHTQQLPDRCYSMAVRHPLMVVGTADRNLIVFNLQNP 180

Query: 181 QSERKRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240
           QSE KRIVSPLKYQTRCVAAFPD++GFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE
Sbjct: 181 QSEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240

Query: 241 IYSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFN 300
           IYSVNSLNFHP+   F++      +   F+F                             
Sbjct: 241 IYSVNSLNFHPVHHTFAT----AGSDGAFNFW---------------------------- 300

Query: 301 FWDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCC 360
             DKDSKQRLKAM RCSQPISCSTFNQDGSIFAYS                         
Sbjct: 301 --DKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYS------------------------- 344

Query: 361 TYDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
               VCYDWSKGAENHNPATAKTYIYLHLPQE EVKGKPRVGGGGRK
Sbjct: 361 ----VCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 344

[Close]
BLAST of ClCG08G001160 vs. NCBI nr
Match: gi|802565819|ref|XP_012067538.1| (PREDICTED: protein RAE1 [Jatropha curcas])

HSP 1 Score: 543.1 bits (1398), Expect = 4.0e-151
Identity = 272/406 (67.00%), Postives = 304/406 (74.88%), Query Frame = 1 

Query: 2   SAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPK 61
           +A ANPNPNKSFEVAQPPSDSVSSLSFSPKANHL+ATSWDNQVRCWEI ++   V S PK
Sbjct: 7   AAAANPNPNKSFEVAQPPSDSVSSLSFSPKANHLIATSWDNQVRCWEITRSGTTVASVPK 66

Query: 62  AFISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPEL 121
           A I+HDQP       DDGTTVFSGGCDKQVKMWPLLSGGQ +T+A H+AP+KE+AWIPE+
Sbjct: 67  ASITHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAAHDAPIKEIAWIPEI 126

Query: 122 SLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ 181
           +LLA+GSWDKT++YWDTRQPNPVLTQQLP+RCY+M VRHPLMVVGTADRNLIVF+L+ PQ
Sbjct: 127 NLLATGSWDKTLRYWDTRQPNPVLTQQLPERCYAMTVRHPLMVVGTADRNLIVFNLQQPQ 186

Query: 182 SERKRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEI 241
           +E KRIVSPLKYQTRCVAAFPD++GFLVGSIEGRVGVHHLD++  +KNFTFKCHRDG+EI
Sbjct: 187 NEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHRDGNEI 246

Query: 242 YSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFNF 301
           YSVNSLNFHP+   F++      +   F+F                              
Sbjct: 247 YSVNSLNFHPVHHTFAT----AGSDGAFNFW----------------------------- 306

Query: 302 WDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCCT 361
            DKDSKQRLKAM RC  PI CSTFN DGSIFAYS                          
Sbjct: 307 -DKDSKQRLKAMTRCPLPIPCSTFNNDGSIFAYS-------------------------- 349

Query: 362 YDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
              VCYDWSKGAENHNP TAKTYIYLHLPQE+EVKGKPRVG  GRK
Sbjct: 367 ---VCYDWSKGAENHNPQTAKTYIYLHLPQESEVKGKPRVGASGRK 349

[Close]
BLAST of ClCG08G001160 vs. NCBI nr
Match: gi|225447856|ref|XP_002271645.1| (PREDICTED: protein RAE1 [Vitis vinifera])

HSP 1 Score: 541.6 bits (1394), Expect = 1.2e-150
Identity = 274/403 (67.99%), Postives = 303/403 (75.19%), Query Frame = 1 

Query: 5   ANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPKAFI 64
           +NPNPNKS EVAQPPSDSVSSLSFSPKAN LVATSWDNQVRCWEIM+N   V S PKA I
Sbjct: 11  SNPNPNKSIEVAQPPSDSVSSLSFSPKANILVATSWDNQVRCWEIMRNGPTVGSVPKASI 70

Query: 65  SHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPELSLL 124
           SHDQP       DDGTTVFSGGCDKQVKMWPLLSGGQ MT+AMH+AP+KEVAWIPE++LL
Sbjct: 71  SHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKEVAWIPEMNLL 130

Query: 125 ASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQSER 184
           A+GSWDKT+KYWDTRQPNPV TQQLPDRCY++ VRHPLMVVGTADRNLIVF+L+ PQ+E 
Sbjct: 131 ATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIVFNLQNPQTEF 190

Query: 185 KRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIYSV 244
           KRI SPLKYQTRCVAAFPD++GFLVGSIEGRVGVHHLD++  +KNFTFKCHR+G+EIYSV
Sbjct: 191 KRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHREGNEIYSV 250

Query: 245 NSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFNFWDK 304
           NSLNFHP+   F++      +   F+F                               DK
Sbjct: 251 NSLNFHPVHHTFAT----AGSDGAFNFW------------------------------DK 310

Query: 305 DSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCCTYDM 364
           DSKQRLKAM RCSQPI CSTFN DGSIFAYS                             
Sbjct: 311 DSKQRLKAMSRCSQPIPCSTFNNDGSIFAYS----------------------------- 350

Query: 365 VCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
           VCYDWSKGAENHNPATAK+YI+LHLPQEAEVKGKPR+G  GRK
Sbjct: 371 VCYDWSKGAENHNPATAKSYIFLHLPQEAEVKGKPRIGTSGRK 350

[Close]
BLAST of ClCG08G001160 vs. NCBI nr
Match: gi|590616007|ref|XP_007023383.1| (Transducin/WD40 repeat-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 540.4 bits (1391), Expect = 2.6e-150
Identity = 274/406 (67.49%), Postives = 303/406 (74.63%), Query Frame = 1 

Query: 2   SAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVVSTPK 61
           +A AN NPNKSFEV QPPSDSVSSLSFSPKAN LVATSWDNQVRCWEI +N   V STPK
Sbjct: 6   AAAANHNPNKSFEVLQPPSDSVSSLSFSPKANILVATSWDNQVRCWEISRNGTAVASTPK 65

Query: 62  AFISHDQP-------DDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPEL 121
           A I+HDQP       DDGTTVFSGGCDKQVKMWPLLSGGQ MT+AMH+AP+KEVAWIPE+
Sbjct: 66  ASITHDQPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKEVAWIPEM 125

Query: 122 SLLASGSWDKTIKYWDTRQPNPVLTQQLPDRCYSMAVRHPLMVVGTADRNLIVFDLRAPQ 181
           +LL +GSWDKT+KYWDTRQPNPV TQQLPDRCY++ V++PLMVVGTADRNLIVF+L+ PQ
Sbjct: 126 NLLVTGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVKYPLMVVGTADRNLIVFNLQNPQ 185

Query: 182 SERKRIVSPLKYQTRCVAAFPDREGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEI 241
           +E KR+VSPLKYQTRCVAAFPD++GFLVGSIEGRVGVHHLD+   NKNFTFKCHRDGSEI
Sbjct: 186 TEYKRVVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDGQQNKNFTFKCHRDGSEI 245

Query: 242 YSVNSLNFHPLLDVFSSFPLQRNALDPFHFCHLHLANGLIIFREVHHTFATAGSDGAFNF 301
           YSVNSLNFHP+   F++      +   F+F                              
Sbjct: 246 YSVNSLNFHPIHHTFAT----AGSDGAFNFW----------------------------- 305

Query: 302 WDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSNPMCGTASYTNNLVFHVYYLYRNCCT 361
            DKDSKQRLKAM RCSQPI CSTFN DGSIFAYS                          
Sbjct: 306 -DKDSKQRLKAMSRCSQPIPCSTFNNDGSIFAYS-------------------------- 348

Query: 362 YDMVCYDWSKGAENHNPATAKTYIYLHLPQEAEVKGKPRVGGGGRK 401
              VCYDWSKGAENHNP+TAKTYI+LHLPQE+EVKGKPRVG  GRK
Sbjct: 366 ---VCYDWSKGAENHNPSTAKTYIFLHLPQESEVKGKPRVGTSGRK 348

The following BLAST results are available for this feature:
BLAST of ClCG08G001160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAE1_ARATH1.2e-13961.98Protein RAE1 OS=Arabidopsis thaliana GN=RAE1 PE=1 SV=2[more]
RAE1L_XENTR7.0e-7943.28mRNA export factor OS=Xenopus tropicalis GN=rae1 PE=2 SV=1[more]
RAE1L_HUMAN3.3e-7642.96mRNA export factor OS=Homo sapiens GN=RAE1 PE=1 SV=1[more]
RAEL1_PONAB3.3e-7642.96mRNA export factor OS=Pongo abelii GN=RAE1 PE=2 SV=1[more]
RAE1L_BOVIN5.6e-7643.21mRNA export factor OS=Bos taurus GN=RAE1 PE=2 SV=1[more]
BLAST of ClCG08G001160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXV7_CUCSA1.6e-16774.94Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649250 PE=4 SV=1[more]
A0A067L422_JATCU2.8e-15167.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27016 PE=4 SV=1[more]
D7STD2_VITVI8.2e-15167.99Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00900 PE=4 SV=... [more]
A0A061G7Z1_THECC1.8e-15067.49Transducin/WD40 repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=... [more]
W9RTQ8_9ROSA4.1e-15067.16Rae1-like protein OS=Morus notabilis GN=L484_004725 PE=4 SV=1[more]
BLAST of ClCG08G001160 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80670.16.9e-14161.98 Transducin/WD40 repeat-like superfamily protein[more]
AT1G15850.15.4e-4563.78 Transducin/WD40 repeat-like superfamily protein[more]
AT3G19590.12.3e-3533.86 Transducin/WD40 repeat-like superfamily protein[more]
AT1G49910.19.5e-3434.54 Transducin/WD40 repeat-like superfamily protein[more]
AT1G69400.16.0e-2025.85 Transducin/WD40 repeat-like superfamily protein[more]
BLAST of ClCG08G001160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119292|ref|XP_008459578.1|1.4e-16774.94PREDICTED: rae1-like protein At1g80670 [Cucumis melo][more]
gi|449447571|ref|XP_004141541.1|2.4e-16774.94PREDICTED: protein RAE1 [Cucumis sativus][more]
gi|802565819|ref|XP_012067538.1|4.0e-15167.00PREDICTED: protein RAE1 [Jatropha curcas][more]
gi|225447856|ref|XP_002271645.1|1.2e-15067.99PREDICTED: protein RAE1 [Vitis vinifera][more]
gi|590616007|ref|XP_007023383.1|2.6e-15067.49Transducin/WD40 repeat-like superfamily protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0051028 mRNA transport
biological_process GO:0015031 protein transport
biological_process GO:0006810 transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0005635 nuclear envelope
cellular_component GO:0005643 nuclear pore
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G001160.1ClCG08G001160.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 21..47
score: 0.0025coord: 101..130
score: 6.
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 218..296
score: 83.0coord: 91..130
score: 1.2E-6coord: 57..88
score: 180.0coord: 133..169
score: 80.0coord: 174..213
score: 420.0coord: 9..48
score: 0
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 98..139
score: 14.218coord: 16..49
score: 10
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 280..328
score: 2.9E-54coord: 14..245
score: 2.9
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 16..139
score: 19
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 17..247
score: 1.83E-46coord: 282..328
score: 1.83
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 117..131
score: 1.5E-5coord: 35..49
score: 1.5E-5coord: 283..297
score: 1.
NoneNo IPR availablePANTHERPTHR10971MRNA EXPORT FACTOR AND BUB3coord: 280..328
score: 5.1E-192coord: 1..245
score: 5.1E-192coord: 358..391
score: 5.1E
NoneNo IPR availablePANTHERPTHR10971:SF16SUBFAMILY NOT NAMEDcoord: 280..328
score: 5.1E-192coord: 1..245
score: 5.1E-192coord: 358..391
score: 5.1E