Bhi06G000188 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi06G000188
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	mRNA export factor
Location	chr6 : 4784611 .. 4793429 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGGAGCTACATCAAATTCATTTGGACGCTATATTTTGTACTATCCGTAGCATTTTCGCCTTTATAAAACCCTCTCCCTCTCTCTCCGAGCCACTTTCTCTCTCAGTTTACATTCGCCGCACGACGGTCGACGGCCTGCTGTTCGTCGGTTCTCAGATTCGCCGGCCTGCTGTCTACTGGTTCTCTTTCGTTTGACAGTGCCGGTTTCCTTCTGTTTGAGCGTTCACTTACGTTACCCACGACCTGGTGGACCTTGAATCGATTTACCCACTTCGTTCGGGTTGAGCAATTTGGAACATTCTACAGCTAGGAATTGAGTCTCTTTGGTGAGATTTTTATGGTTAACAATCACCTTTAATCCTTACCCAGTTTGATTAATTTTTTTTTTGGAAATTTCTTTGCACAGTTTCAGCTTGTTTAGCTTAAGGGGCTGCCTTGAGAAAAGTTTGTTATGTTCAAACAGTCCATTTGAGGTCGAAAGGCGACTTTGAATAAAAAGTTTGGGCAATTCTTTAAGGTCTTTTAGAATTAATTTTAAAAAGTTTCGGTCATTCTTTAAGGTTTTTAAGAATAAATTTACAACATGTAGGTGGGTACTAAATGCTGAAACTAAAGTTATAATACATGTAGTAATTACGCAGTCAAAGTCCAGTCTCTCCAAATATCTCTCTTCTGTTAAATGCCGTTTAGAACAATATCAATATACTCATGCTTCATGCAAGTCACTTGTTGTTGCACGTTGTGATACTTGCAGATAGCTTCGAATGTCTGCATTTGCGAACCCCAATCCTAATAAATCCTTTGAGGTAAGCTGTTATTGATGTGTGCTTTGTGGGTTGTAGATTTTGGATTTCCACTTAATTTGTAAATCAGTTCAATGCTTAGTTTTGCGTGGTTTAAACTTACATGTTTCTTTCTAAATGTCTGTTTTTAGGTTGCTCAGCCTCCCAGTGATTCTGTGTCGAGCCTTAGTTTTAGTCCAAAGGCCAATCACTTGGTTGCGACTTCATGGGATAATCAGGTCCTTTTCTTTTCCCTCTTTTTTGTGCTCTTACTTGCTTATTTAATCATTATTTTTATTCCTATTCAGATTAGGGGTTACTTTTATGAAAGTTAGGAAGTTTTGACTGCTATTTTCAATTGGTCCTTTGGATGTTGTGCGAATTAGCTAAGAGAATGTCAAACTGATATATAGCATTCGAGGTCTATGAATTCCATAATTTCATATTTAATGGCTTCTGCAGGTTCGTTGTTGGGAGATAATGCAAAATGCAGGTAATGTTGCCAGTACGCCTAAGGCTTCTATATCCCACGATCAACCGGTATATAACAATTTCGTTTTGATGTTCTAGTTTAATTAGAATTTTGTTGCTGTAAGATCCAAACGTGGCTAAGTTATTTTGCATATTACTTTTTGGCTTAGGTTCTATGCTCTGCATGGAAGGACGATGGAACGACTGTATTTTCTGGAGGCTGCGACAAACAAGTTAAAATGTGGCCCCTATTGGCCGGTGGTCAAGCCATGACTGTAGCCATGCATGAAGCACCCGTCAAAGAAGTTGCATGGATCCCCGAGATGAGCCTATTGGTCTCTGGAAGTTGGGACAAGACATTAAAGTAAACGCTAATTTGTTTATTCTTAATTTATCTTTAAGTAATTTGAACATTTTGTGACATTCATATATTCTCTTCAATACAAGTAGCACAGTTTCACGATTAAAGCTCAGTTCGTTATTGTGGAACATCAAAAAACATTCCGAGTCAGTTTCACACAATTTGTCTCACTTGCCTGTTTTGATCTTTGTTTCATTCATTTATGTGGGCACGTGTTTGTTCATGTCAAGGCACGTGTAAGCCAGATATGTGGCTTTGACCTCTGCTTTTTTATGGTATACTCACTTGATGGTATGAGTTGATGTAGTTTGAGTGTGAGTTTTTCCTCAAATGGTTGTTCCTTAATTTTTACTTGATGGTATGGGTTGATGTGTAGTATTGCTCCTTAATTTTTTCCTCAAATGGTTTCATTGTGATATGTTTCATCCTAAGAATAACTATGAGTGTGATTGTATTTCGTTTTAGCATGAAATCATATGTTGGATCATTTTAATTAGTCAGATTCATCTCATTTTGAAAGATGATGTTGCTGGAAACCAGCGTGTTCATATCCATGAAGCACCCTACTCTCTCTCTCTCTCTCAGCATTTGCACTTGCTTTGATATTCTGGGACTTGCACCATTCCGGTCACTTGTTAATACGATGAAAAGTATCAAATGTGCCCTTCTGAGGCAGACAATTTGTCATTTTTTGGTCTTCATGTTCACCCTTTGCCTTCTGTTTGTCTACCATGTGGAAGAGTAATCATAGATAGTGGTGAATTACCTATGTGTTCTTATTATGATGAAACTTCTTTTATGGTTTTCTATCAATTCAGGTATTGGGATACAAGGCAGCCAAACCCAGTACATACACAACAACTTCCTGATCGCTGTTATTCAATGTCAGTGAGACATCCACTAATGGTAGTTGGTACTGCGGATAGAAATCTCATAGTATTTAACTTGCAAACTCCTCAGGTATTGTTTTCTATTTTTCCTATCATCTCTCTCTATCTCTGCCTCTAATGTAATAGCTGAAGTTGTGTATAATATTATGTAAATTTCAGTTTTTAACATTTGTTTATGGGGTCTTTCTGACTTCTTTTAAATGTTAATTTCTTTTATCTTTCATATTTCAAGTCTAATACAGTTAAGTGGTGACAGAGTGAATATAAGAGAATTGTTTCACCCTTGAAGTATCAAACAAGATGTGTAGCTGCCTTTCCTGATCAGCAAGGTTTTTTGGTAATATGTCCATCCCTTGCATTAATTTGTTTAAATGTTTGCCTTCCTTCATGTATAATTCTTTTACTCTATCTTGATGATACTTTAGTTACTACTATTTCAAGGTTCTTATTTCTTTACGGAGTCAAATAATTTTACTCATATTGTGAAATTGCTTGATCTGATTTCATTAACCATTCCAGGTTGGTTCAATAGAGGGAAGGGTTGGTGTCCATCACCTTGATGAGTCTATGGCAAATAAGAATTTCACTTTCAAGTGCCACAGGGATGGGTCTGAGATTTATTCTGTCAATTCCTTGAACTTCCATCCTGTAAGTTTAGAATGTATTACGTTATTTATTTTTTGCAGCATATAGAGATCCAAGAAACTCCAAAATCTTAACACAAAATCCCAACAATACATCAACTAACTCCTTCAAGATCAAAGGAAACCTACCTACCAATTAGTGATCAGTGGATTGAATGAAATTTGTGTGTGTGTGTGTGTATGTGGAGTTCAAATCCTGGATTTTTCTACCTCCAATCAAGATGAGTGCATCAATTAGCTGCTAAAGATTACAAGCTTCCTTCACTTATCTCAAACATATCCAGTGATGATCATCCACCATCGATGGCTCGTGCCTCCTGATCTTTTAGTTTTAGTAATACTTTCCAAAATCTTCTTTTCCATGGATTCTAAGTTCTAACCATCACATTGTGCCATTGGTTATTTGGCCCTATAAGGAATCTCTAAACCATTTGGCCTATGAAAATAATTGTTGTTCTTTTTTAAATTACCAACTCTCAACTGTCAGTACACAAAAGCTTTGCAATCATGTTCCAACCAACTGTTTACTTGACCTTTTCTTTTCATGTTAGGATCCCTCCTAACAAGAACAAACTCAAGAATACAAAAACCGAACAAGAGAATTGAAAGATAGAATTATATTGCAATATAATGAAGAAATTACATTGCAATATAATGAAGAAATTACATTGCAATATAATGAAGAAATTACAATATACCTCAGGGTTGAGAAATCCTCTCCCAAATTCCCAATTAGGAAATCCTCACATAAAATTCTTCATACCTTCCTAACACTCTCACTCCTATTTATAGCAATATTCAGGAACTAATTTTCCATTGAATTACTCTTGTACCCCTTACTAATACCATACTAATATTCTACTAATACCCCTATTATTTCTATAGCTAGGTGTCTTACAATACTCCTCCCTTCGAAGACACCTTCTCCTCTAGGTGTGCTTACAAAATACAATCACAAAATTGGGCTTGTTCTTACTCACTTTTTTTTAATGCAATAAAAAATTTGAACTCTCTACCAGCCCCAGCCTCCTTGGAAGAAATTGTCTTTAGCCTTGGAAATCCTTTGGACTGTAGTGATTTCACTTGCATTCAGCCCATTAAACAGCCCATGACCACATAAACTTCTATAATTGTCTTTCTTCTCACAAGGCACGTGATCCCATTTGACAAGTTGTATATCCCTGGGCCAATTTCCACGCCATTTATATTGGTATTTAATTTTTAGAAATTTTCCTTAATGGGCTAGGCCCATGATCCATATGCTGGTCCAAACCCTTCTGAGCCCATACCTCATCTTCCATAAAAATAGCAACTAGCTTCTTGCAATTCCAGCCCATAATCAGGCCCAAAATCATGCTGTCACTTTGTCCTTTCCATGTACCCACCTCCAGCCACGTTTTCCTTCCAGCCCTAGAAATAAATGGGCTTCCATTAATTTTCTCGACTTCAGTCAATAATGCAGCCCAAGAACACAAAATCTGGCTAAGGTATTTTTATTCTCTCCAGGCACGTGTCTACAATTACTGTTGCAATTTTTTTTCCAACCACTGGGCCCACCAACTGACACTTCACGTGGGTAGAGAATTTTTCCCTCTCTTCGAAAATTTTCCTTTTCCCACGCCTTCTTCTCCTTTGGTAGCCCGTTCCCTACTGCAAATTTGGACACCACCTTCGCGAAGACTTCTGGACATGCTTGTGACTTCGCTGCCACCTGCATTCCCACAACCTCCATTCGTGTGTCTGCTCGTCCACCTCCGTCGCACAACATCTCCACCTCCTTTTCCTGCAAATGGTCTTCTCGATTGCAAATCTTTTTCTCTGTCTGACTGGCGATGTTCGCCCTGATGCCTTTCTTCCGCCACGACTTTCCCCCTCCATCTTTTCCCACTGTGATCCAAAGCGACTCTGCTTGTCGGTCTTTTCGCAATCCCAATCCATGAACCATTGGCTTCTTCTCCCTCCATCTCGGCCAACCATCCTCTGCATCTTTGAGCATCGACAATTTCTTCAATCGCCCACCATTGGTCGCGGGCGTTGATTTTTCGCCAGCTTTCCTCCTCGCTTTTTTGATCATGTGTTCGCCGTTAGGTGCTCCTTCCTTCGTTTCTTCTTCCGATTGCCATGTCGCCTTCTCATTAGTAATGGTTGACCCCTTTTCTCCGATGCTTCTACCTCCTGTGATCGGCATTTCCACTTCCATTGAGTCCTTGTCTCTGACCATCTCACCCCTTGCCACCGACGATAGACACGAATTATCAGGTTTCTCTTCTTCGATTTCTCCATCTTCGAGTCCTTATTCTTTTTCTCTTCCTTCTTTTCTTTTGTTTCTATCAACTGCATCTCTTTTATCTTTGGTGTCCATTTTCTCTCAACAAAACTTGCTGGAACAAGCACCATTCCTTCTTCATCACTGCCTTTCAACGTTTCAGAAGATCCTTCCACAAATAAGCTTTCCATTGGAAGCTCGTTGGAAATTTCAGATTCAACTCCTGCCACAAGCATTTCTTGTTTTTTTGATCTTTTCTTAGCCGATTCTTCTTTCTTTGCTTCCATAGCTACTAATCTCCTCTCTTCTCTTTCTCTATCTCTTTGCAAAGAATCCTTGGGCCTTTGTTGCAATGCTTTCATGTCTCCCTGTATTTCTTCCGTATTGGTTTGCAAACATCTAACCCTCACGTTGTTCAACCTTCTCTTTTCTCCTTCTCGCTCGATTTCTTCAATCTCCCCTTGGACTTTCAAAACATCCACAATCGAGGTTGAGCTCTTGATCTCACCCCTTGAGCACCGATACCTATTGACTACCATTGATAACTACTTGACATTCTTGGCCATTTCTTGCACCAAGCCTTTAAGCTCTGAAATATCTCTTCCAACAACATCCACCCTCTCTTCCCTTGTTTATCGAACCATTCTCTTTTCTCCTCTTTGGGTTTCTTGAAACTTCTCCTGGATTTCTCTTTCAATTCTTTCACACTTGCAATCTGCCATCCATTTCCGCATTTGCTCCCATGTCCATGGAGTTTCTCCTCTCTCTGCTGCCTCACGTTTATGATCAGCAGTCCATTTACGCAGCCGTTCCCATGTCCACGGTTCTTGTTCCCCCATTGCGAAACTAAATAAAAAAGAGTACCCAAGAAGAACAGCTCTGATACCAATTTGTTAGGATCTCTCCTAACAAGAACAAACTCAAGAATACAAAGAACAAACAAGACTATTAACAGGTAGAATTATATTGCAATATCATGAAGAAATTATAATACACCTCAACACATTCTAGAGGGCGGAGAAATCCTCTCCTAAATTCCCAATTAGGAAATCCTCACATAAAATTCTTCACACTTTCCTAACACTCCCACGCCTTCTATTTATAGCAGTTATCAATAACTAACTTTTTATCGAATTACCTTTATACCCCTTAGTAATACCATACTAATACTCCTATTATTTCTATAGCTAGGGGCCTTAGACTTCATTTCCCCTCTGAAGAAATACACTCGATCCTTTCCATTCTACCACCTTGCCATAACTCCGCCCCCTCCCCCCTGTTGACTATTTTTAAAATGACAAGTACGTTTTTCTTATCGGTGTGCTCTTGGGGTGGTTATTAATTATTTTTCTGAATGTAAGTGATTACCACCTAGCAATTAAGTTTTGTTTGCTGTATGTTGATCAGTGGTTCTTTAATCTTGCTATTTATTGAACCACACTTTCTTTCAGGTGCATCACACTTTTGCGACTGCAGGGTCGGATGGTGCTTTTAATTTCTGGGACAAGGATAGCAAACAGAGGCTGAAGGTGCCTCAGATCTTTATTAGATTTTTAACTTTATAACCCTTACTCTTTTTCCATATTTACAAAATAGCTTGTGGTTGCATGGGAACTACGTTTAGAAACAACTTTCTGACACAACTTGTTTGGTGGGATAATGCTCCAAAACAAACTGCCCCTTAGTTTGTGGCTCAATTTAATCTTTTATATTAGCTTTATGAACAGAGATCAGTATGTTAATTTATGACAGCATTAAATTGAGCTAAAAACTGACGGGAACTTAATATGTATTGATGTACTTGAGTTAAATGAACCTGTGCAATACCTTCAGTTCAGCACACACTCATATATATATATATTGGCGGTGTTGTATGCTTAAAGATCTATATTAACACGAGGGATAAAAGGAAAGAGAGAAAAATTGCAAGAACGTGTCTGCATATAATTTGTTTTAGTTTTACGATTAGTTACTTCTATAATAAAAAAGTTAAAGGAAAATTATTTGTCCTATCTCTCAGCACCGAACTCCAGAAACTGTATATCTCACGCCCACATAAACTGTTCTATGTAAGTGTGTGACTTTAATGTGCCAGATAATACCACCTTTTTCTCCGATCTTATCAACATCTTGAAAATTCATGTCCAAAAAAAGTTTACATCTTAATAATATTTTGAGGATTGATCTTAATGAATGAATAGTGAATGGTTATCTTTTTTTGCTTTCAGGCCATGTCACGGTGTAGTCAGCCCATAAGTTGTAGCACTTTCAACCAGGATGGGTCGATATTTGCATATTCAGTACGTTTCACTTTCCTTCCTTTATTTATTTATAATAATAATAATTTTTTTTAATTGCTGATGCTTGCTGACCACCTTCCCCTCAAAAGGTTACACGAACACCTATCATAAACCGTTGTTTTCAACATGTTTAGCAACGTGCATTACATTAGGTTATATTAGTCATTCAATGTTAGGTTTAGTAATTGTTACCAATAGACTTCGTGGGTTGAGGGTTTGGAAATAGTAGATAAACATTTCAAATAGTTCGGAAGTGGGGCTTAGGGGATGGCTCCTGAATTTCCTCATTATCTTTTTCTTTGTTCCCACTACAATGTCTCTCTTTCATTTTGGCAAATTCCTATCACGCCTCAACCCAACCATCTTGATTGAAAATATTTTAGACCCTAGTGGGTGCAAGCTGTACAAATACCTTGGTGTTTCATGCCCGTCACAGTTACCGTTATACATATGATATGGTGTACCGTAAGCAAACTGCGGGAATCCTTCTGTTTATGTTCTAAAGAACGTTAGGAAGAAGTTGTAAGTGAGCTGAATTCAACATGTGGAATTTGTGTAGGTGTGCTACGATTGGAGTAAAGGGGCAGAAAATCACAACCCAGCAACAGCAAAGACTTACATTTACTTGCACCTTCCGCAGGTATGGTGTGCATAATATTATTGTTTCTCTTTTCCCTGTACTTGTTTAGAATGTTGTTGGAATATGAGAATTTTGCCTTTTTGGATGTAGGAGGTCGAGGTTAAAGGCAAGCCTCGAGTTGGGGGCGGCGGAAGAAAGTAGTCACTGTAGAATCGATTGCATATTCCCCCCTTTACATGTATCTTTGTTCTTTAATGTCAAATTACTAATAGGTCTAAATAGGCACTTGCAAAAATCTTGAATATATTTTTAGTTTAGAACGTAGACTATTTTTGTATGATTGGAAAATAGTGAATTTTCAAATACTTGAGAGAGCTACAATTGCGTTTCCTTTGCTAAGAGATTTGTATTTTTGTACCAAGTTGTTCATTAATGGTGATGTTTTTGGTGAGATGGAACCATTTTAATTCGAAGAATAGACCTTTTAGAATTTTGATGACCAAGAGGTTGATTCTGATTGGATA

mRNA sequence

TGAGGAGCTACATCAAATTCATTTGGACGCTATATTTTGTACTATCCGTAGCATTTTCGCCTTTATAAAACCCTCTCCCTCTCTCTCCGAGCCACTTTCTCTCTCAGTTTACATTCGCCGCACGACGGTCGACGGCCTGCTGTTCGTCGGTTCTCAGATTCGCCGGCCTGCTGTCTACTGGTTCTCTTTCGTTTGACAGTGCCGGTTTCCTTCTGTTTGAGCGTTCACTTACGTTACCCACGACCTGGTGGACCTTGAATCGATTTACCCACTTCGTTCGGGTTGAGCAATTTGGAACATTCTACAGCTAGGAATTGAGTCTCTTTGATAGCTTCGAATGTCTGCATTTGCGAACCCCAATCCTAATAAATCCTTTGAGGTTGCTCAGCCTCCCAGTGATTCTGTGTCGAGCCTTAGTTTTAGTCCAAAGGCCAATCACTTGGTTGCGACTTCATGGGATAATCAGGTTCGTTGTTGGGAGATAATGCAAAATGCAGGTAATGTTGCCAGTACGCCTAAGGCTTCTATATCCCACGATCAACCGGTTCTATGCTCTGCATGGAAGGACGATGGAACGACTGTATTTTCTGGAGGCTGCGACAAACAAGTTAAAATGTGGCCCCTATTGGCCGGTGGTCAAGCCATGACTGTAGCCATGCATGAAGCACCCGTCAAAGAAGTTGCATGGATCCCCGAGATGAGCCTATTGGTCTCTGGAAGTTGGGACAAGACATTAAAGTATTGGGATACAAGGCAGCCAAACCCAGTACATACACAACAACTTCCTGATCGCTGTTATTCAATGTCAGTGAGACATCCACTAATGGTAGTTGGTACTGCGGATAGAAATCTCATAGTATTTAACTTGCAAACTCCTCAGAGTGAATATAAGAGAATTGTTTCACCCTTGAAGTATCAAACAAGATGTGTAGCTGCCTTTCCTGATCAGCAAGGTTTTTTGGTTGGTTCAATAGAGGGAAGGGTTGGTGTCCATCACCTTGATGAGTCTATGGCAAATAAGAATTTCACTTTCAAGTGCCACAGGGATGGGTCTGAGATTTATTCTGTCAATTCCTTGAACTTCCATCCTGTGCATCACACTTTTGCGACTGCAGGGTCGGATGGTGCTTTTAATTTCTGGGACAAGGATAGCAAACAGAGGCTGAAGGCCATGTCACGGTGTAGTCAGCCCATAAGTTGTAGCACTTTCAACCAGGATGGGTCGATATTTGCATATTCAGTGTGCTACGATTGGAGTAAAGGGGCAGAAAATCACAACCCAGCAACAGCAAAGACTTACATTTACTTGCACCTTCCGCAGGAGGTCGAGGTTAAAGGCAAGCCTCGAGTTGGGGGCGGCGGAAGAAAGTAGTCACTGTAGAATCGATTGCATATTCCCCCCTTTACATGTATCTTTGTTCTTTAATGTCAAATTACTAATAGGTCTAAATAGGCACTTGCAAAAATCTTGAATATATTTTTAGTTTAGAACGTAGACTATTTTTGTATGATTGGAAAATAGTGAATTTTCAAATACTTGAGAGAGCTACAATTGCGTTTCCTTTGCTAAGAGATTTGTATTTTTGTACCAAGTTGTTCATTAATGGTGATGTTTTTGGTGAGATGGAACCATTTTAATTCGAAGAATAGACCTTTTAGAATTTTGATGACCAAGAGGTTGATTCTGATTGGATA

Coding sequence (CDS)

ATGTCTGCATTTGCGAACCCCAATCCTAATAAATCCTTTGAGGTTGCTCAGCCTCCCAGTGATTCTGTGTCGAGCCTTAGTTTTAGTCCAAAGGCCAATCACTTGGTTGCGACTTCATGGGATAATCAGGTTCGTTGTTGGGAGATAATGCAAAATGCAGGTAATGTTGCCAGTACGCCTAAGGCTTCTATATCCCACGATCAACCGGTTCTATGCTCTGCATGGAAGGACGATGGAACGACTGTATTTTCTGGAGGCTGCGACAAACAAGTTAAAATGTGGCCCCTATTGGCCGGTGGTCAAGCCATGACTGTAGCCATGCATGAAGCACCCGTCAAAGAAGTTGCATGGATCCCCGAGATGAGCCTATTGGTCTCTGGAAGTTGGGACAAGACATTAAAGTATTGGGATACAAGGCAGCCAAACCCAGTACATACACAACAACTTCCTGATCGCTGTTATTCAATGTCAGTGAGACATCCACTAATGGTAGTTGGTACTGCGGATAGAAATCTCATAGTATTTAACTTGCAAACTCCTCAGAGTGAATATAAGAGAATTGTTTCACCCTTGAAGTATCAAACAAGATGTGTAGCTGCCTTTCCTGATCAGCAAGGTTTTTTGGTTGGTTCAATAGAGGGAAGGGTTGGTGTCCATCACCTTGATGAGTCTATGGCAAATAAGAATTTCACTTTCAAGTGCCACAGGGATGGGTCTGAGATTTATTCTGTCAATTCCTTGAACTTCCATCCTGTGCATCACACTTTTGCGACTGCAGGGTCGGATGGTGCTTTTAATTTCTGGGACAAGGATAGCAAACAGAGGCTGAAGGCCATGTCACGGTGTAGTCAGCCCATAAGTTGTAGCACTTTCAACCAGGATGGGTCGATATTTGCATATTCAGTGTGCTACGATTGGAGTAAAGGGGCAGAAAATCACAACCCAGCAACAGCAAAGACTTACATTTACTTGCACCTTCCGCAGGAGGTCGAGGTTAAAGGCAAGCCTCGAGTTGGGGGCGGCGGAAGAAAGTAG

Protein sequence

MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLKYWDTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQSEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYSVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK

Homology

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BLAST of Bhi06G000188 vs. Swiss-Prot
Match: sp|Q38942|RAE1_ARATH (Protein RAE1 OS=Arabidopsis thaliana OX=3702 GN=RAE1 PE=1 SV=2)

HSP 1 Score: 544.3 bits (1401), Expect = 9.9e-154
Identity = 287/342 (83.92%), Postives = 314/342 (91.81%), Query Frame = 0


Query: 3   AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKA 62
           A AN NPNKS+EV   P+DS+SSLSFSP+A+ LVATSWDNQVRCWEI ++  ++AS PKA
Sbjct: 8   ATANSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKA 67

Query: 63  SISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXXXX 122
           SISHDQPVLCSAWKDDGTTVFSGGCDKQ KMWPLL+GGQ +TVAXXXXXXXXXXXXXXXX
Sbjct: 68  SISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAXXXXXXXXXXXXXXXX 127

Query: 123 XXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQS 182
           XXXXXXXXXXXXXX TRQ NPVHTQQLPD+CY++SV+HPLMVVGTADRNLIVFNLQ PQ+
Sbjct: 128 XXXXXXXXXXXXXXDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQT 187

Query: 183 EYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIY 242
           E+KRI SPLKYQTRCV AFPDQQGFLVGSIEGRVGVHHLD+S  +KNFTFKCHRDG++IY
Sbjct: 188 EFKRIQSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNDIY 247

Query: 243 SVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYSV 302
           SVNSLNFHPVH TFATAGSDGAFNFWDKDSKQRLKAMSRC+QPI CS+FN DGSI+AY+ 
Sbjct: 248 SVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAYAA 307

Query: 303 CYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           CYDWSKGAENHNPATAK+ I+LHLPQE EVK KPRVG  GRK
Sbjct: 308 CYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPRVGATGRK 349

[Close]

BLAST of Bhi06G000188 vs. Swiss-Prot
Match: sp|Q5FVA9|RAE1L_XENTR (mRNA export factor OS=Xenopus tropicalis OX=8364 GN=rae1 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 9.8e-77
Identity = 172/352 (48.86%), Postives = 217/352 (61.65%), Query Frame = 0


Query: 2   SAFANPNPNKSFEVAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVAS 61
           +A  N NP K  EV  PP DS+S LSFSP     N L+A SW N VRCWE+  N   +  
Sbjct: 21  TATDNHNPMKDIEVTSPPDDSISCLSFSPPTLPGNFLIAGSWANDVRCWEVQDNGQTI-- 80

Query: 62  TPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVA--XXXXXXXXXX 121
            PKA   H  PVL   W DDG+ VF+  CDK  KMW  L   Q++ +A            
Sbjct: 81  -PKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD-LNSNQSIQIAQHDAPIKTVHWV 140

Query: 122 XXXXXXXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFN 181
                  XXXXXXXXXXXXXX   PNP+ T QLP+RCY   V +P+ VV TA+R LIV+ 
Sbjct: 141 KAPNYSCXXXXXXXXXXXXXXXXSPNPLLTLQLPERCYCADVVYPMAVVATAERGLIVYQ 200

Query: 182 LQTPQSEYKRIVSPLKYQTRCVAAFPDQQ----GFLVGSIEGRVGVHHLD-ESMANKNFT 241
           L+   SE++RI SPLK+Q RCVA F D+Q    GF +GSIEGRV +H+++  + A  NFT
Sbjct: 201 LENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT 260

Query: 242 FKCHRDG-------SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQ 301
           FKCHR          +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK   +  Q
Sbjct: 261 FKCHRSNGTNTTAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ 320

Query: 302 PISCSTFNQDGSIFAYSVCYDWSKGAENHNPATAKTYIYL-HLPQEVEVKGK 336
           PIS  +FN +G+IFAYS  YDWSKG E +NP   K YI+L +  +E++ + K
Sbjct: 321 PISACSFNHNGNIFAYSSSYDWSKGHEFYNP-QKKNYIFLRNAAEELKPRNK 367

[Close]

BLAST of Bhi06G000188 vs. Swiss-Prot
Match: sp|Q7ZWF0|RAE1L_DANRE (mRNA export factor OS=Danio rerio OX=7955 GN=rae1 PE=2 SV=2)

HSP 1 Score: 279.6 bits (714), Expect = 4.5e-74
Identity = 167/346 (48.27%), Postives = 215/346 (62.14%), Query Frame = 0


Query: 8   NPNKSFEVAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVASTPKASI 67
           NP K  EV  PP DS+S L+FSP     N L+  SW N VRCWE+  N   V   PKA  
Sbjct: 27  NPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNGQTV---PKAQQ 86

Query: 68  SHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVA--XXXXXXXXXXXXXXXX 127
            H  PVL   W DDG+ VF+  CDK  KMW  L   QA+ +A                 X
Sbjct: 87  MHTGPVLDVCWSDDGSKVFTASCDKTAKMWD-LNSNQAIQIAQHEGPIRTIHWIKAPNYX 146

Query: 128 XXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQS 187
           XXXXXXXXXXXXXXX    NP+ + Q+P+RCY   V +P+ VV TA+R LIV+ L+   S
Sbjct: 147 XXXXXXXXXXXXXXXXXXXNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLENQPS 206

Query: 188 EYKRIVSPLKYQTRCVAAFPDQQ----GFLVGSIEGRVGVHHLD-ESMANKNFTFKCHRD 247
           E++RI SPLK+Q RCVA F D+Q    GF +GSIEGRV +H+++  + A  NFTFKCHR 
Sbjct: 207 EFRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRS 266

Query: 248 G-------SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCST 307
                    +IY+VN+++FHPVH T AT GSDG F+FWDKD++ +LK   +  QPI+   
Sbjct: 267 NGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACC 326

Query: 308 FNQDGSIFAYSVCYDWSKGAENHNPATAKTYIYL-HLPQEVEVKGK 336
           FN +G+IFAY+  YDWSKG E +NP   K YI+L +  +E++ + K
Sbjct: 327 FNHNGNIFAYASSYDWSKGHEYYNP-QKKNYIFLRNAAEELKPRNK 367

[Close]

BLAST of Bhi06G000188 vs. Swiss-Prot
Match: sp|P41838|RAE1_SCHPO (Poly(A)+ RNA export protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rae1 PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 7.3e-72
Identity = 141/335 (42.09%), Postives = 191/335 (57.01%), Query Frame = 0


Query: 11  KSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPV 70
           K  EVAQPP DS+S L+FSP+A +L A+SWD++VR +E+     ++    KA   H  PV
Sbjct: 21  KDVEVAQPPEDSISDLAFSPQAEYLAASSWDSKVRIYEVQATGQSIG---KALYEHQGPV 80

Query: 71  LCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVA--XXXXXXXXXXXXXXXXXXXXXX 130
           L   W  DGT V SG  DK  K++ +  G      A                        
Sbjct: 81  LSVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQVAAHDDAVRCVRFVEAMGTSPILATGS 140

Query: 131 XXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQSEYKRIV 190
                     RQ  P+ T  LP+R Y+M   HPL+ V TA+RN+ V NL  P   +K  +
Sbjct: 141 WDKTLKYWDLRQSTPIATVSLPERVYAMDCVHPLLTVATAERNICVINLSEPTKIFKLAM 200

Query: 191 SPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHR----DGSEIYSV 250
           SPLK+QTR +A F    G+ +GS+EGR  + ++DE  A++NF+F+CHR    + +++YSV
Sbjct: 201 SPLKFQTRSLACFIKGDGYAIGSVEGRCAIQNIDEKNASQNFSFRCHRNQAGNSADVYSV 260

Query: 251 NSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYSVCY 310
           NS+ FHP + TF+TAGSDG F+FWDKDS QRLK+       ISCSTFN+ G IFAY++ Y
Sbjct: 261 NSIAFHPQYGTFSTAGSDGTFSFWDKDSHQRLKSYPNVGGTISCSTFNRTGDIFAYAISY 320

Query: 311 DWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVG 340
           DWSKG    N A     I LH   + E+K +P+ G
Sbjct: 321 DWSKG-YTFNNAQLPNKIMLHPVPQDEIKPRPKKG 351

[Close]

BLAST of Bhi06G000188 vs. Swiss-Prot
Match: sp|P78406|RAE1L_HUMAN (mRNA export factor OS=Homo sapiens OX=9606 GN=RAE1 PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 8.0e-71
Identity = 168/348 (48.28%), Postives = 213/348 (61.21%), Query Frame = 0


Query: 6   NPNPNKSFEVAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVASTPKA 65
           N NP K  EV   P DS+  LSFSP     N L+A SW N VRCWE+ Q++G   + PKA
Sbjct: 25  NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEV-QDSGQ--TIPKA 84

Query: 66  SISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVA--XXXXXXXXXXXXXX 125
              H  PVL   W DDG+ VF+  CDK  KMW  L+  QA+ +A                
Sbjct: 85  QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD-LSSNQAIQIAQHDAPVKTIHWIKAPN 144

Query: 126 XXXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTP 185
           XXXXXXXXXXXXXXXXX           LP+RCY   V +P+ VV TA+R LIV+ L+  
Sbjct: 145 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLPERCYCADVIYPMAVVATAERGLIVYQLENQ 204

Query: 186 QSEYKRIVSPLKYQTRCVAAFPDQQ----GFLVGSIEGRVGVHHLD-ESMANKNFTFKCH 245
            SE++RI SPLK+Q RCVA F D+Q    GF +GSIEGRV +H+++  + A  NFTFKCH
Sbjct: 205 PSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCH 264

Query: 246 RDG-------SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISC 305
           R          +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK   +  QPIS 
Sbjct: 265 RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISA 324

Query: 306 STFNQDGSIFAYSVCYDWSKGAENHNPATAKTYIYL-HLPQEVEVKGK 336
             FN +G+IFAY+  YDWSKG E +NP   K YI+L +  +E++ + K
Sbjct: 325 CCFNHNGNIFAYASSYDWSKGHEFYNP-QKKNYIFLRNAAEELKPRNK 367

[Close]

BLAST of Bhi06G000188 vs. TAIR10
Match: AT1G80670.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 544.3 bits (1401), Expect = 5.5e-155
Identity = 287/342 (83.92%), Postives = 314/342 (91.81%), Query Frame = 0


Query: 3   AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKA 62
           A AN NPNKS+EV   P+DS+SSLSFSP+A+ LVATSWDNQVRCWEI ++  ++AS PKA
Sbjct: 8   ATANSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKA 67

Query: 63  SISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXXXX 122
           SISHDQPVLCSAWKDDGTTVFSGGCDKQ KMWPLL+GGQ +TVAXXXXXXXXXXXXXXXX
Sbjct: 68  SISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAXXXXXXXXXXXXXXXX 127

Query: 123 XXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQS 182
           XXXXXXXXXXXXXX TRQ NPVHTQQLPD+CY++SV+HPLMVVGTADRNLIVFNLQ PQ+
Sbjct: 128 XXXXXXXXXXXXXXDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQT 187

Query: 183 EYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIY 242
           E+KRI SPLKYQTRCV AFPDQQGFLVGSIEGRVGVHHLD+S  +KNFTFKCHRDG++IY
Sbjct: 188 EFKRIQSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNDIY 247

Query: 243 SVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYSV 302
           SVNSLNFHPVH TFATAGSDGAFNFWDKDSKQRLKAMSRC+QPI CS+FN DGSI+AY+ 
Sbjct: 248 SVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAYAA 307

Query: 303 CYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           CYDWSKGAENHNPATAK+ I+LHLPQE EVK KPRVG  GRK
Sbjct: 308 CYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPRVGATGRK 349

[Close]

BLAST of Bhi06G000188 vs. TAIR10
Match: AT3G19590.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 175.6 bits (444), Expect = 5.1e-44
Identity = 108/340 (31.76%), Postives = 167/340 (49.12%), Query Frame = 0


Query: 9   PNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQ 68
           P+   E++ PPSD +S+L FS  ++HL+ +SWD +VR +++  N      + K    H  
Sbjct: 6   PSAGRELSNPPSDGISNLRFSNNSDHLLVSSWDKRVRLYDVSTN------SLKGEFLHGG 65

Query: 69  PVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXXXXXXXXXX 128
            VL   + DD  + FS G D +V+      G + +                         
Sbjct: 66  AVLDCCFHDD-FSGFSVGADYKVRRIVFNVGKEDILGTHDKAVRCVEYSYAAGQVITGSW 125

Query: 129 XXXXXXXXXTRQPNPVHTQ----QLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQSEY 188
                         P  TQ      P+R YSMS+    +VV TA R++ +++L+      
Sbjct: 126 DKTVKCWDPRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSQPE 185

Query: 189 KRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLD--ESMANKNFTFKCHRDGSE-- 248
           +R  S LKYQTRCV  +P+  G+ + S+EGRV +   D  E+   K + FKCHR      
Sbjct: 186 QRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAAQAKKYAFKCHRKSEAGR 245

Query: 249 --IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIF 308
             +Y VNS+ FHP++ TFAT G DG  N WD ++K+RL   S+    IS  +F++DG + 
Sbjct: 246 DIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLL 305

Query: 309 AYSVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRV 339
           A +  Y + +G ++  P      I++    E+EVK KP+V
Sbjct: 306 AVASSYTFEEGEKSQEPEA----IFVRSVNEIEVKPKPKV 334

[Close]

BLAST of Bhi06G000188 vs. TAIR10
Match: AT1G15850.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-40
Identity = 73/99 (73.74%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 8   NPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHD 67
           NPN S+E+  P +DS+SSLSFSPKA+ LVATSWD QVRCWEI ++ G++AS PK S+SHD
Sbjct: 14  NPNNSYEITPPATDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHD 73

Query: 68  QPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVA 107
           QPVLCSAWKDDGTTVF+GGCDKQ KMWPLL+G Q  TVA
Sbjct: 74  QPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVA 112

[Close]

BLAST of Bhi06G000188 vs. TAIR10
Match: AT1G49910.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 161.8 bits (408), Expect = 7.7e-40
Identity = 102/335 (30.45%), Postives = 164/335 (48.96%), Query Frame = 0


Query: 14  EVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCS 73
           E++ PPSD +S+L FS  ++HL+ +SWD  VR ++            +    H   VL  
Sbjct: 10  ELSNPPSDGISNLRFSNNSDHLLVSSWDKSVRLYDAN------GDLMRGEFKHGGAVLDC 69

Query: 74  AWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXXXXXXXXXXXXXXX 133
            + DD ++ FS   D +V+     AG + +                              
Sbjct: 70  CFHDD-SSGFSVCADTKVRRIDFNAGKEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIK 129

Query: 134 XXXXT----RQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQSEYKRIVS 193
                     +   + T   P+R  S+S+    +VV TA R++ +++L+      +R  S
Sbjct: 130 CWDPRGASGTERTQIGTYMQPERVNSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRRES 189

Query: 194 PLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLD--ESMANKNFTFKCHR---DGSEI-YS 253
            LKYQTRCV  +P+  G+ + S+EGRV +   D  E+   K + FKCHR   DG +I Y 
Sbjct: 190 SLKYQTRCVRCYPNGTGYALSSVEGRVSMEFFDLSEAAQAKKYAFKCHRKSEDGRDIVYP 249

Query: 254 VNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYSVC 313
           VN++ FHP++ TFA+ G DG  N WD ++K+RL   S+    I+  +F++DG + A +  
Sbjct: 250 VNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAVASS 309

Query: 314 YDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRV 339
           Y + +G + H P      I++    E+EVK KP+V
Sbjct: 310 YTFEEGDKPHEPDA----IFVRSVNEIEVKPKPKV 333

[Close]

BLAST of Bhi06G000188 vs. TAIR10
Match: AT1G69400.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.7e-18
Identity = 72/305 (23.61%), Postives = 137/305 (44.92%), Query Frame = 0


Query: 14  EVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCS 73
           E   P  D+VS L FSP++N+L+  SWD+ +R ++       V S+  +   + Q  L  
Sbjct: 7   EFENPIEDAVSRLRFSPQSNNLLVASWDSYLRLYD-------VESSSLSLELNSQAALLD 66

Query: 74  AWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXXXXXXXXXXXXXXX 133
              ++ +T F+ G D  ++ + L A G   T+                            
Sbjct: 67  CCFENESTSFTSGSDGFIRRYDLNA-GTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKI 126

Query: 134 XXXXTRQ-PNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQSEYKRIVSPLK 193
               TRQ  + V +         ++V    +VV   D ++ +++L+     ++   S ++
Sbjct: 127 KFWDTRQRESLVFSTDAGGAVGCVTVSGNNLVV-CVDASMHIYDLRNLDEAFQSYASQVE 186

Query: 194 YQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANK-NFTFKCH---RDGS-EIYSVNSL 253
              RC+ + P  +G+ VGS++GRV V   + S +++  ++F+CH   R+G  +   +N++
Sbjct: 187 VPIRCITSVPYSRGYAVGSVDGRVAVDFPNTSCSSEIKYSFRCHPKSRNGRLDGVCINAI 246

Query: 254 NFHPV-HHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYSVCYDW 312
            F P    TF T  ++G    W+  S++RL  + R S  I+   F+  G + A +  + +
Sbjct: 247 EFSPCGSGTFVTGDNEGYVISWNAKSRRRLNELPRYSNSIASLAFDHTGELLAIASSHTY 302

[Close]

BLAST of Bhi06G000188 vs. TrEMBL
Match: tr|A0A1S3CAI4|A0A1S3CAI4_CUCME (protein RAE1 OS=Cucumis melo OX=3656 GN=LOC103498666 PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 2.3e-179
Identity = 337/344 (97.97%), Postives = 342/344 (99.42%), Query Frame = 0


Query: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP 60
           M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ASTP
Sbjct: 1   MAAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNLASTP 60

Query: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXX 120
           KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLL+GGQAMTVAXXXXXXXXXXXXXX
Sbjct: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTP 180
           XXXXXXXXXXXXXXXXX  QPNPVHTQQLPDRCYSM+VRHPLMVVGTADRNLIVFNLQTP
Sbjct: 121 XXXXXXXXXXXXXXXXXXXQPNPVHTQQLPDRCYSMAVRHPLMVVGTADRNLIVFNLQTP 180

Query: 181 QSEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240
           QSE+KRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE
Sbjct: 181 QSEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240

Query: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY 300
           IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY
Sbjct: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY 300

Query: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK
Sbjct: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 344

[Close]

BLAST of Bhi06G000188 vs. TrEMBL
Match: tr|A0A0A0KXV7|A0A0A0KXV7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649250 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 8.6e-179
Identity = 336/344 (97.67%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP 60
           M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ASTP
Sbjct: 1   MAAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNLASTP 60

Query: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXX 120
           KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLL+GGQAMTVAXXXXXXXXXXXXXX
Sbjct: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTP 180
           XXXXXXXXXXXXXXXXX  QPNPVHTQQLPDRCYSM+VRHPLMVVGTADRNLIVFNLQ P
Sbjct: 121 XXXXXXXXXXXXXXXXXXXQPNPVHTQQLPDRCYSMAVRHPLMVVGTADRNLIVFNLQNP 180

Query: 181 QSEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240
           QSE+KRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE
Sbjct: 181 QSEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240

Query: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY 300
           IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY
Sbjct: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY 300

Query: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK
Sbjct: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 344

[Close]

BLAST of Bhi06G000188 vs. TrEMBL
Match: tr|A0A2P5FUS1|A0A2P5FUS1_9ROSA (Coatomer beta subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_028220 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.1e-162
Identity = 309/339 (91.15%), Postives = 318/339 (93.81%), Query Frame = 0


Query: 6   NPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASIS 65
           NPNPN SFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIM+N   V STPKASIS
Sbjct: 11  NPNPNNSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMRNGNVVGSTPKASIS 70

Query: 66  HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXXXXXXX 125
           HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLL+        XXXXXXXXXXXXXXXXXXX
Sbjct: 71  HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSXXXXXXXXXXXXXXXXXXXXXXXXXXX 130

Query: 126 XXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQSEYK 185
           XXXXXXXXXXXXTRQPNPVHTQQLPDRCYS++VRHPLMVVGTADRNLIVFNLQ PQ+E+K
Sbjct: 131 XXXXXXXXXXXXTRQPNPVHTQQLPDRCYSLTVRHPLMVVGTADRNLIVFNLQNPQTEFK 190

Query: 186 RIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIYSVN 245
           RI+SPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLD+S  +KNFTFKCHRDGSEIYSVN
Sbjct: 191 RIISPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSEIYSVN 250

Query: 246 SLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYSVCYD 305
           SLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPI CSTFN DGSIFAYSVCYD
Sbjct: 251 SLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSTFNNDGSIFAYSVCYD 310

Query: 306 WSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           WSKGAENHNPATAKTYIYLHLPQE EVKGKPRVG  GRK
Sbjct: 311 WSKGAENHNPATAKTYIYLHLPQESEVKGKPRVGTSGRK 349

[Close]

BLAST of Bhi06G000188 vs. TrEMBL
Match: tr|A0A067L422|A0A067L422_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_27016 PE=4 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 3.3e-162
Identity = 306/343 (89.21%), Postives = 323/343 (94.17%), Query Frame = 0


Query: 2   SAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPK 61
           +A ANPNPNKSFEVAQPPSDSVSSLSFSPKANHL+ATSWDNQVRCWEI ++   VAS PK
Sbjct: 7   AAAANPNPNKSFEVAQPPSDSVSSLSFSPKANHLIATSWDNQVRCWEITRSGTTVASVPK 66

Query: 62  ASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXXX 121
           ASI+HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLL+GGQ +TVAXXXXXXXXXXXXXXX
Sbjct: 67  ASITHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAXXXXXXXXXXXXXXX 126

Query: 122 XXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQ 181
           XXXXXXXXXXXXXXX TRQPNPV TQQLP+RCY+M+VRHPLMVVGTADRNLIVFNLQ PQ
Sbjct: 127 XXXXXXXXXXXXXXXDTRQPNPVLTQQLPERCYAMTVRHPLMVVGTADRNLIVFNLQQPQ 186

Query: 182 SEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEI 241
           +E+KRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLD++  +KNFTFKCHRDG+EI
Sbjct: 187 NEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHRDGNEI 246

Query: 242 YSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYS 301
           YSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAM+RC  PI CSTFN DGSIFAYS
Sbjct: 247 YSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMTRCPLPIPCSTFNNDGSIFAYS 306

Query: 302 VCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           VCYDWSKGAENHNP TAKTYIYLHLPQE EVKGKPRVG  GRK
Sbjct: 307 VCYDWSKGAENHNPQTAKTYIYLHLPQESEVKGKPRVGASGRK 349

[Close]

BLAST of Bhi06G000188 vs. TrEMBL
Match: tr|A0A061G7Z1|A0A061G7Z1_THECC (Transducin/WD40 repeat-like superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_027395 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 2.8e-161
Identity = 306/343 (89.21%), Postives = 321/343 (93.59%), Query Frame = 0


Query: 2   SAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPK 61
           +A AN NPNKSFEV QPPSDSVSSLSFSPKAN LVATSWDNQVRCWEI +N   VASTPK
Sbjct: 6   AAAANHNPNKSFEVLQPPSDSVSSLSFSPKANILVATSWDNQVRCWEISRNGTAVASTPK 65

Query: 62  ASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXXX 121
           ASI+HDQPVLCS WKDDGTTVFSGGCDKQVKMWPLL+GGQ M   XXXXXXXXXXXXXXX
Sbjct: 66  ASITHDQPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPMXXXXXXXXXXXXXXXXXX 125

Query: 122 XXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQ 181
           XXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCY+++V++PLMVVGTADRNLIVFNLQ PQ
Sbjct: 126 XXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYALTVKYPLMVVGTADRNLIVFNLQNPQ 185

Query: 182 SEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEI 241
           +EYKR+VSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLD+   NKNFTFKCHRDGSEI
Sbjct: 186 TEYKRVVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDGQQNKNFTFKCHRDGSEI 245

Query: 242 YSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYS 301
           YSVNSLNFHP+HHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPI CSTFN DGSIFAYS
Sbjct: 246 YSVNSLNFHPIHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSTFNNDGSIFAYS 305

Query: 302 VCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           VCYDWSKGAENHNP+TAKTYI+LHLPQE EVKGKPRVG  GRK
Sbjct: 306 VCYDWSKGAENHNPSTAKTYIFLHLPQESEVKGKPRVGTSGRK 348

[Close]

BLAST of Bhi06G000188 vs. NCBI nr
Match: XP_008459578.1 (PREDICTED: protein RAE1 [Cucumis melo] >XP_008459580.1 PREDICTED: protein RAE1 [Cucumis melo])

HSP 1 Score: 637.1 bits (1642), Expect = 3.4e-179
Identity = 337/344 (97.97%), Postives = 342/344 (99.42%), Query Frame = 0


Query: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP 60
           M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ASTP
Sbjct: 1   MAAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNLASTP 60

Query: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXX 120
           KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLL+GGQAMTVAXXXXXXXXXXXXXX
Sbjct: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTP 180
           XXXXXXXXXXXXXXXXX  QPNPVHTQQLPDRCYSM+VRHPLMVVGTADRNLIVFNLQTP
Sbjct: 121 XXXXXXXXXXXXXXXXXXXQPNPVHTQQLPDRCYSMAVRHPLMVVGTADRNLIVFNLQTP 180

Query: 181 QSEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240
           QSE+KRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE
Sbjct: 181 QSEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240

Query: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY 300
           IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY
Sbjct: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY 300

Query: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK
Sbjct: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 344

[Close]

BLAST of Bhi06G000188 vs. NCBI nr
Match: XP_004141541.1 (PREDICTED: protein RAE1 [Cucumis sativus] >XP_011656080.1 PREDICTED: protein RAE1 [Cucumis sativus] >KGN52656.1 hypothetical protein Csa_5G649250 [Cucumis sativus])

HSP 1 Score: 635.2 bits (1637), Expect = 1.3e-178
Identity = 336/344 (97.67%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP 60
           M+AFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ASTP
Sbjct: 1   MAAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNLASTP 60

Query: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXX 120
           KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLL+GGQAMTVAXXXXXXXXXXXXXX
Sbjct: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTP 180
           XXXXXXXXXXXXXXXXX  QPNPVHTQQLPDRCYSM+VRHPLMVVGTADRNLIVFNLQ P
Sbjct: 121 XXXXXXXXXXXXXXXXXXXQPNPVHTQQLPDRCYSMAVRHPLMVVGTADRNLIVFNLQNP 180

Query: 181 QSEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240
           QSE+KRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE
Sbjct: 181 QSEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240

Query: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY 300
           IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY
Sbjct: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY 300

Query: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK
Sbjct: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 344

[Close]

BLAST of Bhi06G000188 vs. NCBI nr
Match: XP_022144434.1 (protein RAE1-like isoform X1 [Momordica charantia] >XP_022144435.1 protein RAE1-like isoform X1 [Momordica charantia])

HSP 1 Score: 630.9 bits (1626), Expect = 2.5e-177
Identity = 333/344 (96.80%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP 60
           MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP
Sbjct: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP 60

Query: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXX 120
           KASISHD PVLCSAWKDDGTTVFSGGCDKQVKMWPLL+GGQAMT+AXXXXXXXXXXXXXX
Sbjct: 61  KASISHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTIAXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTP 180
           XXXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSM+VR+PLMVVGTADRNLIVFNLQ+P
Sbjct: 121 XXXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQSP 180

Query: 181 QSEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240
           Q+E+KRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDES+ANKNFTFKCHRDGSE
Sbjct: 181 QNEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSE 240

Query: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY 300
           IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAM RCSQPISCSTFNQDGSIFAY
Sbjct: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAY 300

Query: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           SVCYDWSKGAENHNPATAKTYIYLHLPQE EVKGKPRVGGGGRK
Sbjct: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQESEVKGKPRVGGGGRK 344

[Close]

BLAST of Bhi06G000188 vs. NCBI nr
Match: XP_022955507.1 (protein RAE1-like [Cucurbita moschata] >XP_022955508.1 protein RAE1-like [Cucurbita moschata])

HSP 1 Score: 620.9 bits (1600), Expect = 2.5e-174
Identity = 331/344 (96.22%), Postives = 337/344 (97.97%), Query Frame = 0


Query: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP 60
           MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP
Sbjct: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP 60

Query: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXX 120
           KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLL+GGQAMTVAXXXXXXXXXXXXXX
Sbjct: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTP 180
           XXXXXXXXXXXXXXXXX RQPNPVHTQQLPDRCYSM+VR+PLMVVGTADRNLIVFNLQ P
Sbjct: 121 XXXXXXXXXXXXXXXXXXRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNP 180

Query: 181 QSEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240
           Q+E+KRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDES+ANKNFTFKCHRDGSE
Sbjct: 181 QNEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSE 240

Query: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY 300
           IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAM RCSQPIS STFNQDGSIFAY
Sbjct: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAY 300

Query: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           SVCYDWSKGAENHNPATAKT IYLHLPQE EVKGKPRVGG GRK
Sbjct: 301 SVCYDWSKGAENHNPATAKTCIYLHLPQESEVKGKPRVGGSGRK 344

[Close]

BLAST of Bhi06G000188 vs. NCBI nr
Match: XP_022980460.1 (protein RAE1-like [Cucurbita maxima] >XP_022980461.1 protein RAE1-like [Cucurbita maxima])

HSP 1 Score: 618.6 bits (1594), Expect = 1.3e-173
Identity = 330/344 (95.93%), Postives = 336/344 (97.67%), Query Frame = 0


Query: 1   MSAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP 60
           MSAFANPNPNKS EVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP
Sbjct: 1   MSAFANPNPNKSLEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP 60

Query: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAXXXXXXXXXXXXXX 120
           KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLL+GGQAMTVAXXXXXXXXXXXXXX
Sbjct: 61  KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTP 180
           XXXXXXXXXXXXXXXXX RQPNPVHTQQLPDRCYSM+VR+PLMVVGTADRNLIVFNLQ P
Sbjct: 121 XXXXXXXXXXXXXXXXXXRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNP 180

Query: 181 QSEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSE 240
           Q+E+KRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDES+ANKNFTFKCHRDGSE
Sbjct: 181 QNEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSE 240

Query: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAY 300
           IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAM RCSQPIS STFNQDGSIFAY
Sbjct: 241 IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAY 300

Query: 301 SVCYDWSKGAENHNPATAKTYIYLHLPQEVEVKGKPRVGGGGRK 345
           SVCYDWSKGAENHNPATAKT IYLHLPQE EVKGKPRVGG GRK
Sbjct: 301 SVCYDWSKGAENHNPATAKTCIYLHLPQESEVKGKPRVGGSGRK 344

The following BLAST results are available for this feature:

BLAST of Bhi06G000188 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q38942\|RAE1_ARATH	9.9e-154	83.92	Protein RAE1 OS=Arabidopsis thaliana OX=3702 GN=RAE1 PE=1 SV=2	[more]
sp\|Q5FVA9\|RAE1L_XENTR	9.8e-77	48.86	mRNA export factor OS=Xenopus tropicalis OX=8364 GN=rae1 PE=2 SV=1	[more]
sp\|Q7ZWF0\|RAE1L_DANRE	4.5e-74	48.27	mRNA export factor OS=Danio rerio OX=7955 GN=rae1 PE=2 SV=2	[more]
sp\|P41838\|RAE1_SCHPO	7.3e-72	42.09	Poly(A)+ RNA export protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484...	[more]
sp\|P78406\|RAE1L_HUMAN	8.0e-71	48.28	mRNA export factor OS=Homo sapiens OX=9606 GN=RAE1 PE=1 SV=1	[more]

BLAST of Bhi06G000188 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80670.1	5.5e-155	83.92	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G19590.1	5.1e-44	31.76	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G15850.1	2.6e-40	73.74	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G49910.1	7.7e-40	30.45	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G69400.1	1.7e-18	23.61	Transducin/WD40 repeat-like superfamily protein	[more]

BLAST of Bhi06G000188 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CAI4\|A0A1S3CAI4_CUCME	2.3e-179	97.97	protein RAE1 OS=Cucumis melo OX=3656 GN=LOC103498666 PE=4 SV=1	[more]
tr\|A0A0A0KXV7\|A0A0A0KXV7_CUCSA	8.6e-179	97.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649250 PE=4 SV=1	[more]
tr\|A0A2P5FUS1\|A0A2P5FUS1_9ROSA	1.1e-162	91.15	Coatomer beta subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_028220 PE=4 SV=...	[more]
tr\|A0A067L422\|A0A067L422_JATCU	3.3e-162	89.21	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_27016 PE=4 SV=1	[more]
tr\|A0A061G7Z1\|A0A061G7Z1_THECC	2.8e-161	89.21	Transducin/WD40 repeat-like superfamily protein isoform 1 OS=Theobroma cacao OX=...	[more]

BLAST of Bhi06G000188 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459578.1	3.4e-179	97.97	PREDICTED: protein RAE1 [Cucumis melo] >XP_008459580.1 PREDICTED: protein RAE1 [...	[more]
XP_004141541.1	1.3e-178	97.67	PREDICTED: protein RAE1 [Cucumis sativus] >XP_011656080.1 PREDICTED: protein RAE...	[more]
XP_022144434.1	2.5e-177	96.80	protein RAE1-like isoform X1 [Momordica charantia] >XP_022144435.1 protein RAE1-...	[more]
XP_022955507.1	2.5e-174	96.22	protein RAE1-like [Cucurbita moschata] >XP_022955508.1 protein RAE1-like [Cucurb...	[more]
XP_022980460.1	1.3e-173	95.93	protein RAE1-like [Cucurbita maxima] >XP_022980461.1 protein RAE1-like [Cucurbit...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR017986	WD40_repeat_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat
IPR020472	G-protein_beta_WD-40_rep

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000972	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
biological_process	GO:0008150	biological_process
biological_process	GO:0051028	mRNA transport
biological_process	GO:0015031	protein transport
biological_process	GO:0006810	transport
cellular_component	GO:0005643	nuclear pore
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005635	nuclear envelope
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000188	Bhi06M000188	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 256..270 score: 29.22 coord: 124..138 score: 42.89 coord: 35..49 score: 29.43
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 98..137 e-value: 3.7E-5 score: 33.2 coord: 57..95 e-value: 1.4E-4 score: 31.2 coord: 140..176 e-value: 69.0 score: 5.4 coord: 225..269 e-value: 0.0011 score: 28.3 coord: 9..48 e-value: 0.001 score: 28.4 coord: 181..220 e-value: 340.0 score: 1.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 230..269 e-value: 0.017 score: 15.8 coord: 65..94 e-value: 0.013 score: 16.3 coord: 108..137 e-value: 0.0023 score: 18.6 coord: 21..47 e-value: 0.0021 score: 18.8
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 244..278 score: 9.807
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 63..104 score: 10.642
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 16..49 score: 10.308
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 105..146 score: 14.418
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 2..338 e-value: 4.5E-108 score: 363.9
None	No IPR available	PANTHER	PTHR10971	MRNA EXPORT FACTOR AND BUB3	coord: 4..339
None	No IPR available	PANTHER	PTHR10971:SF16	SUBFAMILY NOT NAMED	coord: 4..339
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 16..278 score: 28.212
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	SSF50978	WD40 repeat-like	coord: 18..301

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi06G000188	Csa5G649250	Cucumber (Chinese Long) v2	cuwgoB461
Bhi06G000188	MELO3C022166	Melon (DHL92) v3.5.1	mewgoB029
Bhi06G000188	ClCG08G001160	Watermelon (Charleston Gray)	wcgwgoB608
Bhi06G000188	CSPI05G30840	Wild cucumber (PI 183967)	cpiwgoB465
Bhi06G000188	Cucsa.237280	Cucumber (Gy14) v1	cgywgoB471
Bhi06G000188	Lsi08G000920	Bottle gourd (USVL1VR-Ls)	lsiwgoB590
Bhi06G000188	CsGy5G030170	Cucumber (Gy14) v2	cgybwgoB439
Bhi06G000188	MELO3C022166.2	Melon (DHL92) v3.6.1	medwgoB027
Bhi06G000188	CsaV3_5G039870	Cucumber (Chinese Long) v3	cucwgoB474
Bhi06G000188	Cla012441	Watermelon (97103) v1	wgowmB124
Bhi06G000188	Cla97C08G145500	Watermelon (97103) v2	wgowmbB147

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi06G000188	Watermelon (Charleston Gray)	wcgwgoB609
Bhi06G000188	Watermelon (97103) v2	wgowmbB148
Bhi06G000188	Watermelon (97103) v1	wgowmB125
Bhi06G000188	Silver-seed gourd	carwgoB0212
Bhi06G000188	Silver-seed gourd	carwgoB0793
Bhi06G000188	Cucumber (Gy14) v1	cgywgoB474
Bhi06G000188	Cucurbita maxima (Rimu)	cmawgoB0009
Bhi06G000188	Cucurbita maxima (Rimu)	cmawgoB0556
Bhi06G000188	Cucurbita moschata (Rifu)	cmowgoB0001
Bhi06G000188	Cucurbita moschata (Rifu)	cmowgoB0553
Bhi06G000188	Cucurbita pepo (Zucchini)	cpewgoB0671
Bhi06G000188	Cucurbita pepo (Zucchini)	cpewgoB0974
Bhi06G000188	Cucumber (Chinese Long) v2	cuwgoB468
Bhi06G000188	Bottle gourd (USVL1VR-Ls)	lsiwgoB586