ClCG07G009480 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTTACTAGGGAAGCGTCCACGGGGGCAGATGAAGAGAACGGCGAGTGTATCAGGAATCACGGTGGATCTGAGCAACGTGGAGGGTAAAGAGGCGTCCGATGATCAGAATCCCAGCACCGGAGAAATTCCTCCGGTGATGGGTAGCCAAAGTCTGGAAACTGATGTAATGAATTATAGGTTATCTTTTGTGTCACCGAGAGGCCGGACAAATCCCTCCGCCTTTAATAAACACATTAATCACCATTCTTCTCTTCACTTTCTCCGGACTTGCACCTTCTGTCACCGCCGTCTCTCTCCCGCCCATGACATTTACATGTACATGTAAGATTCTCTCTTTTCTTTTCATTTAATTACTTCCTCCATCTTTATGCATCTAACAAAATTATAATAACCAAAAAAAAGAAAAAAAAAAAAAACCGTGCACCCACTTGTCTTTTGTGCGGCCTAGACAACTACCTAATACAAATTTATCATTTAGAAAAGAAGAGGATGAATCATTTAGATGCTAAGTAATCATTAACTTATTGATTCAAGCCTTTGGGTTGGATGTTGTTTTTAAAGAAAATAAATTATGAATTAAAATTGAGTGTGAGTTTGATTTTTGGTTGGTTTGTGTGTAGGGGAGATACGGCTTTTTGCAGTGCGGAGTGCAGAGAGCAGAAGATGGAACAAGATTGCAGAAAAGAGAAGAGCTCCACCACCGTCTGTGGCGGCGGCCGGCAAAAAGAAACATCAGACTGTGGCAGCAGTGTATAA ATGATGTTACTAGGGAAGCGTCCACGGGGGCAGATGAAGAGAACGGCGAGTGTATCAGGAATCACGGTGGATCTGAGCAACGTGGAGGGTAAAGAGGCGTCCGATGATCAGAATCCCAGCACCGGAGAAATTCCTCCGGTGATGGGTAGCCAAAGTCTGGAAACTGATGTAATGAATTATAGGTTATCTTTTGTGTCACCGAGAGGCCGGACAAATCCCTCCGCCTTTAATAAACACATTAATCACCATTCTTCTCTTCACTTTCTCCGGACTTGCACCTTCTGTCACCGCCGTCTCTCTCCCGCCCATGACATTTACATGTACATGGGAGATACGGCTTTTTGCAGTGCGGAGTGCAGAGAGCAGAAGATGGAACAAGATTGCAGAAAAGAGAAGAGCTCCACCACCGTCTGTGGCGGCGGCCGGCAAAAAGAAACATCAGACTGTGGCAGCAGTGTATAA ATGATGTTACTAGGGAAGCGTCCACGGGGGCAGATGAAGAGAACGGCGAGTGTATCAGGAATCACGGTGGATCTGAGCAACGTGGAGGGTAAAGAGGCGTCCGATGATCAGAATCCCAGCACCGGAGAAATTCCTCCGGTGATGGGTAGCCAAAGTCTGGAAACTGATGTAATGAATTATAGGTTATCTTTTGTGTCACCGAGAGGCCGGACAAATCCCTCCGCCTTTAATAAACACATTAATCACCATTCTTCTCTTCACTTTCTCCGGACTTGCACCTTCTGTCACCGCCGTCTCTCTCCCGCCCATGACATTTACATGTACATGGGAGATACGGCTTTTTGCAGTGCGGAGTGCAGAGAGCAGAAGATGGAACAAGATTGCAGAAAAGAGAAGAGCTCCACCACCGTCTGTGGCGGCGGCCGGCAAAAAGAAACATCAGACTGTGGCAGCAGTGTATAA MMLLGKRPRGQMKRTASVSGITVDLSNVEGKEASDDQNPSTGEIPPVMGSQSLETDVMNYRLSFVSPRGRTNPSAFNKHINHHSSLHFLRTCTFCHRRLSPAHDIYMYMGDTAFCSAECREQKMEQDCRKEKSSTTVCGGGRQKETSDCGSSV
BLAST of ClCG07G009480 vs. TrEMBL
Match: A0A0A0KUK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G030990 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 2.5e-52 Identity = 108/141 (76.60%), Postives = 122/141 (86.52%), Query Frame = 1
BLAST of ClCG07G009480 vs. TrEMBL
Match: A0A0D2QN75_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G044500 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 4.7e-22 Identity = 65/139 (46.76%), Postives = 86/139 (61.87%), Query Frame = 1
BLAST of ClCG07G009480 vs. TrEMBL
Match: A0A0B0MB50_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_12895 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 8.0e-22 Identity = 65/139 (46.76%), Postives = 84/139 (60.43%), Query Frame = 1
BLAST of ClCG07G009480 vs. TrEMBL
Match: A0A0B0MD97_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_13795 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 8.0e-22 Identity = 66/139 (47.48%), Postives = 85/139 (61.15%), Query Frame = 1
BLAST of ClCG07G009480 vs. TrEMBL
Match: V4SL60_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026585mg PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.0e-21 Identity = 70/168 (41.67%), Postives = 91/168 (54.17%), Query Frame = 1
BLAST of ClCG07G009480 vs. TAIR10
Match: AT1G78020.1 (AT1G78020.1 Protein of unknown function (DUF581)) HSP 1 Score: 96.7 bits (239), Expect = 1.3e-20 Identity = 60/142 (42.25%), Postives = 73/142 (51.41%), Query Frame = 1
BLAST of ClCG07G009480 vs. TAIR10
Match: AT1G22160.1 (AT1G22160.1 Protein of unknown function (DUF581)) HSP 1 Score: 88.6 bits (218), Expect = 3.7e-18 Identity = 57/137 (41.61%), Postives = 76/137 (55.47%), Query Frame = 1
BLAST of ClCG07G009480 vs. TAIR10
Match: AT4G39795.1 (AT4G39795.1 Protein of unknown function (DUF581)) HSP 1 Score: 88.2 bits (217), Expect = 4.8e-18 Identity = 54/132 (40.91%), Postives = 69/132 (52.27%), Query Frame = 1
BLAST of ClCG07G009480 vs. TAIR10
Match: AT4G17670.1 (AT4G17670.1 Protein of unknown function (DUF581)) HSP 1 Score: 68.2 bits (165), Expect = 5.1e-12 Identity = 48/133 (36.09%), Postives = 66/133 (49.62%), Query Frame = 1
BLAST of ClCG07G009480 vs. TAIR10
Match: AT5G47060.1 (AT5G47060.1 Protein of unknown function (DUF581)) HSP 1 Score: 61.6 bits (148), Expect = 4.8e-10 Identity = 31/64 (48.44%), Postives = 38/64 (59.38%), Query Frame = 1
BLAST of ClCG07G009480 vs. NCBI nr
Match: gi|449462872|ref|XP_004149159.1| (PREDICTED: uncharacterized protein LOC101212822 [Cucumis sativus]) HSP 1 Score: 213.0 bits (541), Expect = 3.7e-52 Identity = 108/141 (76.60%), Postives = 122/141 (86.52%), Query Frame = 1
BLAST of ClCG07G009480 vs. NCBI nr
Match: gi|659107644|ref|XP_008453781.1| (PREDICTED: uncharacterized protein LOC103494409 [Cucumis melo]) HSP 1 Score: 213.0 bits (541), Expect = 3.7e-52 Identity = 110/140 (78.57%), Postives = 121/140 (86.43%), Query Frame = 1
BLAST of ClCG07G009480 vs. NCBI nr
Match: gi|720016690|ref|XP_010261230.1| (PREDICTED: uncharacterized protein LOC104600098 [Nelumbo nucifera]) HSP 1 Score: 117.1 bits (292), Expect = 2.7e-23 Identity = 71/143 (49.65%), Postives = 83/143 (58.04%), Query Frame = 1
BLAST of ClCG07G009480 vs. NCBI nr
Match: gi|659080132|ref|XP_008440627.1| (PREDICTED: uncharacterized protein LOC103484988 [Cucumis melo]) HSP 1 Score: 116.3 bits (290), Expect = 4.7e-23 Identity = 69/152 (45.39%), Postives = 94/152 (61.84%), Query Frame = 1
BLAST of ClCG07G009480 vs. NCBI nr
Match: gi|359497432|ref|XP_003635513.1| (PREDICTED: uncharacterized protein LOC100261790 [Vitis vinifera]) HSP 1 Score: 115.2 bits (287), Expect = 1.0e-22 Identity = 68/140 (48.57%), Postives = 81/140 (57.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |