ClCG07G005130 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG07G005130
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr07 : 6908509 .. 6908945 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTAGCTGCTTTGCAGTTTGCCACTGCCAATGAGGATGAGGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGTTATGAAACTTGCGAGAAGGAATGCCTTGAAAATGGCAATGGCCAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAACTGCTGGTACTCTCTTTTCTCTCTATTTCTTGATGTTAAATTGTTTATTTTCCCATTTTCATCCCTTTCATAATCAAGAAATTCTTATATTTTTGTGAATTTACACACTTTTATGTATGTCTCAAACCCTTTATTCACATACAGTTTTATTTTCTTATATTAATTTAAATTGTTGTCTATTTTTTTCACAGATAAGCTAAACATCAAATTGAATTGA

mRNA sequence

ATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTAGCTGCTTTGCAGTTTGCCACTGCCAATGAGGATGAGGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGTTATGAAACTTGCGAGAAGGAATGCCTTGAAAATGGCAATGGCCAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAACTGCTGATAAGCTAAACATCAAATTGAATTGA

Coding sequence (CDS)

ATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTAGCTGCTTTGCAGTTTGCCACTGCCAATGAGGATGAGGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGTTATGAAACTTGCGAGAAGGAATGCCTTGAAAATGGCAATGGCCAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAACTGCTGATAAGCTAAACATCAAATTGAATTGA

Protein sequence

MAKKMIAVFLMFIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLENGNGQSFCEVKCDEDCDEKETADKLNIKLN

Homology

[Close]

BLAST of ClCG07G005130 vs. Swiss-Prot
Match: ALL6_OLEEU (Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-09
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 1


Query: 37 DAKYKSCYETCEKECLENGNGQSFCEVKCDEDCDEKETADKL 79
          +A++K CY+TC KEC + GNG +FCE+KCD DC  K+  +KL
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

[Close]

BLAST of ClCG07G005130 vs. TrEMBL
Match: A0A0A0KPA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.0e-31
Identity = 66/83 (79.52%), Postives = 76/83 (91.57%), Query Frame = 1


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLENGNGQSF 60
          MA KMIA+FLM IVVVAALQFA AN+++V KYEAKFDAKYKSC+ETCEKECL  G+GQS+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCDEKETADKLNIKLN 84
          CEVKCDEDCDEKE ADKL+I+L+
Sbjct: 61 CEVKCDEDCDEKEAADKLHIELH 83

[Close]

BLAST of ClCG07G005130 vs. TrEMBL
Match: A0A0A0K9Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.6e-29
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEDE-VTKYEAKFDAKYKSCYETCEKECLENG-NGQ 60
          MAKKM+AVFLM IVVVA LQF  ANE++ VTKYEAKFDAKYKSCYETCEKECL N  NG+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCDEKETADKLNIKLN 84
          SFCEVKCDEDC EKE ADKL+I+L+
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

[Close]

BLAST of ClCG07G005130 vs. TrEMBL
Match: A0A0A0KDP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.3e-26
Identity = 60/81 (74.07%), Postives = 70/81 (86.42%), Query Frame = 1


Query: 1  MAKKMIAVFLMFIVVVAALQFATANED-EVTKYEAKFDAKYKSCYETCEKECLENGNGQS 60
          MAKKM+AVFLM IVVV +LQFATAN++ EV  YEAKFDAKYK+C+ TCEKEC+E G+G S
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 FCEVKCDEDCDEKETADKLNI 81
          +CEVKCDEDC  KE ADKL+I
Sbjct: 61 YCEVKCDEDCGAKEAADKLHI 81

[Close]

BLAST of ClCG07G005130 vs. TrEMBL
Match: A0A0A0KFH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102480 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.4e-25
Identity = 57/85 (67.06%), Postives = 73/85 (85.88%), Query Frame = 1


Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLENG-NGQ 60
          MAKKM+ V L+ IV++A L+F+  N E++  KYE+KFDA+YKSCYE+CEKECL NG NGQ
Sbjct: 1  MAKKMMGVLLICIVIMAVLEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQ 60

Query: 61 SFCEVKCDEDCDEKETADKLNIKLN 84
          S+CEVKCDEDCDEKE ADKL++++N
Sbjct: 61 SYCEVKCDEDCDEKEVADKLHVEVN 85

[Close]

BLAST of ClCG07G005130 vs. TrEMBL
Match: A0A0A0KCI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-24
Identity = 58/80 (72.50%), Postives = 70/80 (87.50%), Query Frame = 1


Query: 3  KKMIAVFLMFIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLENG-NGQSF 62
          KKM+ V L+ IVV+AAL+F+  N E++  KYE+KFDAKYK+CYE+CEKECLENG NGQSF
Sbjct: 4  KKMMGVLLICIVVMAALEFSIVNGEEKEDKYESKFDAKYKTCYESCEKECLENGNNGQSF 63

Query: 63 CEVKCDEDCDEKETADKLNI 81
          CEVKCDEDC EKE+ADKL+I
Sbjct: 64 CEVKCDEDCGEKESADKLHI 83

[Close]

BLAST of ClCG07G005130 vs. NCBI nr
Match: gi|659114221|ref|XP_008456958.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 3.9e-32
Identity = 70/84 (83.33%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLENGNGQS 60
          MAKKMIA+FLM IVVVAALQFA+AN EDEV KYEAKFDAKYKSC++TCEKECLENG+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKETADKLNIKLN 84
          +CEVKCDEDC+EKE ADKL+I+L+
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of ClCG07G005130 vs. NCBI nr
Match: gi|449457470|ref|XP_004146471.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus])

HSP 1 Score: 142.1 bits (357), Expect = 4.3e-31
Identity = 66/83 (79.52%), Postives = 76/83 (91.57%), Query Frame = 1


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLENGNGQSF 60
          MA KMIA+FLM IVVVAALQFA AN+++V KYEAKFDAKYKSC+ETCEKECL  G+GQS+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCDEKETADKLNIKLN 84
          CEVKCDEDCDEKE ADKL+I+L+
Sbjct: 61 CEVKCDEDCDEKEAADKLHIELH 83

[Close]

BLAST of ClCG07G005130 vs. NCBI nr
Match: gi|700191316|gb|KGN46520.1| (hypothetical protein Csa_6G106720 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 2.4e-29
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEDE-VTKYEAKFDAKYKSCYETCEKECLENG-NGQ 60
          MAKKM+AVFLM IVVVA LQF  ANE++ VTKYEAKFDAKYKSCYETCEKECL N  NG+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCDEKETADKLNIKLN 84
          SFCEVKCDEDC EKE ADKL+I+L+
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

[Close]

BLAST of ClCG07G005130 vs. NCBI nr
Match: gi|659119712|ref|XP_008459802.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo])

HSP 1 Score: 128.3 bits (321), Expect = 6.4e-27
Identity = 63/84 (75.00%), Postives = 69/84 (82.14%), Query Frame = 1


Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLENGNGQS 60
          MAKKM+AVFLM IVVVA LQFATAN EDEV  YEAKFDAKYK+C+  CEKEC+E G G S
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFATANKEDEVANYEAKFDAKYKACFVICEKECVERGGGHS 60

Query: 61 FCEVKCDEDCDEKETADKLNIKLN 84
          +CEVKCDEDC  KE ADKL I L+
Sbjct: 61 YCEVKCDEDCGAKEAADKLGIILH 84

[Close]

BLAST of ClCG07G005130 vs. NCBI nr
Match: gi|449445523|ref|XP_004140522.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-26
Identity = 60/81 (74.07%), Postives = 70/81 (86.42%), Query Frame = 1


Query: 1  MAKKMIAVFLMFIVVVAALQFATANED-EVTKYEAKFDAKYKSCYETCEKECLENGNGQS 60
          MAKKM+AVFLM IVVV +LQFATAN++ EV  YEAKFDAKYK+C+ TCEKEC+E G+G S
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 FCEVKCDEDCDEKETADKLNI 81
          +CEVKCDEDC  KE ADKL+I
Sbjct: 61 YCEVKCDEDCGAKEAADKLHI 81

The following BLAST results are available for this feature:

BLAST of ClCG07G005130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ALL6_OLEEU	1.6e-09	54.76	Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1	[more]

BLAST of ClCG07G005130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPA7_CUCSA	3.0e-31	79.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1	[more]
A0A0A0K9Z9_CUCSA	1.6e-29	80.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1	[more]
A0A0A0KDP7_CUCSA	1.3e-26	74.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1	[more]
A0A0A0KFH6_CUCSA	1.4e-25	67.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102480 PE=4 SV=1	[more]
A0A0A0KCI6_CUCSA	1.2e-24	72.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1	[more]

BLAST of ClCG07G005130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114221\|ref\|XP_008456958.1\|	3.9e-32	83.33	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo]	[more]
gi\|449457470\|ref\|XP_004146471.1\|	4.3e-31	79.52	PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus]	[more]
gi\|700191316\|gb\|KGN46520.1\|	2.4e-29	80.00	hypothetical protein Csa_6G106720 [Cucumis sativus]	[more]
gi\|659119712\|ref\|XP_008459802.1\|	6.4e-27	75.00	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo]	[more]
gi\|449445523\|ref\|XP_004140522.1\|	1.9e-26	74.07	PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015333	Pollen_allergen_ole-e-6

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function	GO:0019864	IgG binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G005130.1	ClCG07G005130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015333	Pollen allergen ole e 6	GENE3D	G3DSA:1.10.287.720		coord: 38..80 score: 3.0
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole-e-6	coord: 43..79 score: 5.3
IPR015333	Pollen allergen ole e 6	unknown	SSF111388	Pollen allergen ole e 6	coord: 37..78 score: 5.75
None	No IPR available	PANTHER	PTHR35632	FAMILY NOT NAMED	coord: 1..80 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG07G005130	Csa5G222980	Cucumber (Chinese Long) v2	cuwcgB402
ClCG07G005130	MELO3C020152	Melon (DHL92) v3.5.1	mewcgB069
ClCG07G005130	Cla97C07G133490	Watermelon (97103) v2	wcgwmbB307
ClCG07G005130	Bhi07G000413	Wax gourd	wcgwgoB596
ClCG07G005130	CSPI05G11590	Wild cucumber (PI 183967)	cpiwcgB420
ClCG07G005130	Lsi04G010180	Bottle gourd (USVL1VR-Ls)	lsiwcgB297
ClCG07G005130	CsGy5G008840	Cucumber (Gy14) v2	cgybwcgB369
ClCG07G005130	MELO3C020152.2	Melon (DHL92) v3.6.1	medwcgB065
ClCG07G005130	CsaV3_5G010980	Cucumber (Chinese Long) v3	cucwcgB422

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG07G005130	Cucurbita pepo (Zucchini)	cpewcgB179
ClCG07G005130	Cucurbita pepo (Zucchini)	cpewcgB409
ClCG07G005130	Cucurbita pepo (Zucchini)	cpewcgB410
ClCG07G005130	Bottle gourd (USVL1VR-Ls)	lsiwcgB250
ClCG07G005130	Cucumber (Gy14) v2	cgybwcgB451
ClCG07G005130	Silver-seed gourd	carwcgB0260
ClCG07G005130	Silver-seed gourd	carwcgB0651
ClCG07G005130	Silver-seed gourd	carwcgB0887
ClCG07G005130	Cucumber (Chinese Long) v3	cucwcgB510
ClCG07G005130	Watermelon (97103) v2	wcgwmbB294
ClCG07G005130	Watermelon (Charleston Gray)	wcgwcgB076
ClCG07G005130	Cucumber (Gy14) v1	cgywcgB244
ClCG07G005130	Cucurbita maxima (Rimu)	cmawcgB673
ClCG07G005130	Cucurbita maxima (Rimu)	cmawcgB674
ClCG07G005130	Cucurbita moschata (Rifu)	cmowcgB262
ClCG07G005130	Cucurbita moschata (Rifu)	cmowcgB675
ClCG07G005130	Cucurbita moschata (Rifu)	cmowcgB676
ClCG07G005130	Wild cucumber (PI 183967)	cpiwcgB516
ClCG07G005130	Cucumber (Chinese Long) v2	cuwcgB490
ClCG07G005130	Watermelon (97103) v1	wcgwmB365