ClCG06G009960 (gene) Watermelon (Charleston Gray)

Overview
NameClCG06G009960
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Descriptionauxin-regulated gene involved in organ size LENGTH=130
LocationCG_Chr06 : 20142050 .. 20142493 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCTTGGATTTCAAGAAGCCGAGAAGAGGGGAGTTCCGAATCGCGACGATTTCCTCAATTTGCAGCAACGGACTCAACACCATTGTTATTTCATGGATGGAACAACCTCTAATAATTCCAATTACAGTTCCGATTCCACCAATAGGATTTCCTATTACGCCGCCGCCGCCGCACAACATCGCCGGAAGATCGAGTACACGCGGTCTCTATCGCAGGGGTCACCGCGACGGTTGGTGCCGGCGGCGAGTTATTTAGGGGTGCTGCTGTGCTTGGCGGCGTCGTTGTTGATTCTTCCGTTGGTTCTTCCGCCTCTGCCGCCGCCGCCGTTGATGCTGTTGCTGCTTCTGCCGATTGGGATTTTGGGAATGCTTATGGTGTTAGCGTTTATGCCTTCTAATGATACCAAGGAAATCACTTCCTCTTCTCATACATATATGTAA

mRNA sequence

ATGACTCTTGGATTTCAAGAAGCCGAGAAGAGGGGAGTTCCGAATCGCGACGATTTCCTCAATTTGCAGCAACGGACTCAACACCATTGTTATTTCATGGATGGAACAACCTCTAATAATTCCAATTACAGTTCCGATTCCACCAATAGGATTTCCTATTACGCCGCCGCCGCCGCACAACATCGCCGGAAGATCGAGTACACGCGGTCTCTATCGCAGGGGTCACCGCGACGGTTGGTGCCGGCGGCGAGTTATTTAGGGGTGCTGCTGTGCTTGGCGGCGTCGTTGTTGATTCTTCCGTTGGTTCTTCCGCCTCTGCCGCCGCCGCCGTTGATGCTGTTGCTGCTTCTGCCGATTGGGATTTTGGGAATGCTTATGGTGTTAGCGTTTATGCCTTCTAATGATACCAAGGAAATCACTTCCTCTTCTCATACATATATGTAA

Coding sequence (CDS)

ATGACTCTTGGATTTCAAGAAGCCGAGAAGAGGGGAGTTCCGAATCGCGACGATTTCCTCAATTTGCAGCAACGGACTCAACACCATTGTTATTTCATGGATGGAACAACCTCTAATAATTCCAATTACAGTTCCGATTCCACCAATAGGATTTCCTATTACGCCGCCGCCGCCGCACAACATCGCCGGAAGATCGAGTACACGCGGTCTCTATCGCAGGGGTCACCGCGACGGTTGGTGCCGGCGGCGAGTTATTTAGGGGTGCTGCTGTGCTTGGCGGCGTCGTTGTTGATTCTTCCGTTGGTTCTTCCGCCTCTGCCGCCGCCGCCGTTGATGCTGTTGCTGCTTCTGCCGATTGGGATTTTGGGAATGCTTATGGTGTTAGCGTTTATGCCTTCTAATGATACCAAGGAAATCACTTCCTCTTCTCATACATATATGTAA

Protein sequence

MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
Homology
[Close]
BLAST of ClCG06G009960 vs. Swiss-Prot
Match: ARL_ARATH (ARGOS-like protein OS=Arabidopsis thaliana GN=ARL PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-19
Identity = 64/138 (46.38%), Postives = 90/138 (65.22%), Query Frame = 1 

Query: 16  RDDFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNR-ISYYAAAAAQHRRKIEYTRSLS-Q 75
           ++D +N+Q+   H+      + +NN +   D   +  S+  +A A    K E  R+LS Q
Sbjct: 9   QNDIINIQE---HY------SLNNNMDVRGDHNRKNTSFRGSAPAPIMGKQELFRTLSSQ 68

Query: 76  GSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLA 135
            SPRRL+ A+ +    + VL+ L ASLLILPL+LPPLPPPP MLLL+ PIGI+ +LMVLA
Sbjct: 69  NSPRRLISASYFSLESMVVLVGLTASLLILPLILPPLPPPPFMLLLI-PIGIMVLLMVLA 128

Query: 136 FMPSNDTKEITSSSHTYM 148
           FMPS+++K ++SSS T+M
Sbjct: 129 FMPSSNSKHVSSSS-TFM 135

[Close]
BLAST of ClCG06G009960 vs. Swiss-Prot
Match: ARGOS_BRARP (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis GN=ARGOS PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13
Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 1 

Query: 11  RGVPN-RDDFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAAQHRRKIEYTR 70
           R  PN ++D +N+Q+R  ++   MD     NS  + +          A      K E  R
Sbjct: 3   RKTPNLQNDIINIQERYSNNLV-MDVGGGRNSRKNVNFRRP----PPAMTSENSKHELRR 62

Query: 71  SLSQGSPRRLVPAASY-----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGM 130
           + S  S +RL+  A+Y     L +L+ L ASLLILPLVLPPLPPPP M LLL+PIGI+ +
Sbjct: 63  TFS--SQKRLMIPANYFSLESLVILVGLTASLLILPLVLPPLPPPPFM-LLLVPIGIMVL 122

Query: 131 LMVLAFMPSNDTK 138
           L++LAFMPS+ ++
Sbjct: 123 LIILAFMPSSSSR 127

[Close]
BLAST of ClCG06G009960 vs. Swiss-Prot
Match: ARGOS_ARATH (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana GN=ARGOS PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.5e-13
Identity = 55/134 (41.04%), Postives = 73/134 (54.48%), Query Frame = 1 

Query: 18  DFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAAQHRRKIEYTRSLSQGSPR 77
           D +N+Q    ++   MD   +N  N S  S+             + K E  RS S    R
Sbjct: 11  DIINIQDSYSNN-RVMDVGRNNRKNMSFRSS-----------PEKSKQELRRSFS-AQKR 70

Query: 78  RLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPS 137
            ++PA  +    L +L+ L ASLLILPLVLPPLPPPP M LLL+PIGI+ +L+VLAFMPS
Sbjct: 71  MMIPANYFSLESLFLLVGLTASLLILPLVLPPLPPPPFM-LLLVPIGIMVLLVVLAFMPS 130

Query: 138 NDTKEITSSSHTYM 148
           + +   T  +  +M
Sbjct: 131 SHSNANTDVTCNFM 130

[Close]
BLAST of ClCG06G009960 vs. Swiss-Prot
Match: ARGOS_ORYSJ (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica GN=ARGOS PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-09
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 1 

Query: 88  VLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSS 144
           +L+C+ ASL+ILPLVLPPLPPPP M L+L+P+ +L +L+ LAFMP+      TSSS
Sbjct: 107 LLVCVTASLVILPLVLPPLPPPPSM-LMLVPVAMLVLLLALAFMPTT-----TSSS 156

[Close]
BLAST of ClCG06G009960 vs. Swiss-Prot
Match: ORS1_ARATH (Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana GN=ORS1 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-06
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 1 

Query: 83  ASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSND 136
           A  + +LL L+  LLILP  LPPLPPPP   LLLLP+ ++ +L+ LAF PSN+
Sbjct: 27  ARSVALLLFLSLLLLILPPFLPPLPPPP-ATLLLLPLLLMILLIFLAFSPSNE 78

[Close]
BLAST of ClCG06G009960 vs. TrEMBL
Match: A0A0A0LHQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123610 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-61
Identity = 126/147 (85.71%), Postives = 136/147 (92.52%), Query Frame = 1 

Query: 1   MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAAQ 60
           MTLGFQEAEKRGVPN + FL+L Q +Q+H Y MDG+ SNNSN+ SDSTNRI+YYAAAA Q
Sbjct: 1   MTLGFQEAEKRGVPNPNHFLHLHQPSQNHYYSMDGS-SNNSNFGSDSTNRITYYAAAA-Q 60

Query: 61  HRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIG 120
            RRK+EY RSLSQG+PRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIG
Sbjct: 61  DRRKVEYLRSLSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIG 120

Query: 121 ILGMLMVLAFMPSNDTKEITSSSHTYM 148
           ILGMLMVLAFMPSNDTK+ITSSSHTYM
Sbjct: 121 ILGMLMVLAFMPSNDTKDITSSSHTYM 145

[Close]
BLAST of ClCG06G009960 vs. TrEMBL
Match: R0FYH8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024269mg PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-19
Identity = 63/134 (47.01%), Postives = 88/134 (65.67%), Query Frame = 1 

Query: 16  RDDFLNLQQRTQHHCYFMDGTTSNNS-NYSSDSTNRISYYAAAAAQHRRKIEYTRSLS-Q 75
           ++D +N+Q     HC   +   +N   +   D+   IS+  +A A   RK E  R+LS Q
Sbjct: 9   QNDIINIQD----HCSLNNNNNNNKKMDMRRDNRKNISFRGSAPAPIMRKQELFRTLSSQ 68

Query: 76  GSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLA 135
            SPRRL+ A+ +    + VL+ L ASLLILPL+LPPLPPPP M LLL+PIGI+ +LMVLA
Sbjct: 69  NSPRRLISASYFSLESMVVLVGLTASLLILPLILPPLPPPPFM-LLLIPIGIMVLLMVLA 128

Query: 136 FMPSNDTKEITSSS 144
           FMPS+++K + +SS
Sbjct: 129 FMPSSNSKHVVTSS 137

[Close]
BLAST of ClCG06G009960 vs. TrEMBL
Match: A0A061ERG1_THECC (Auxin-regulated gene involved in organ size OS=Theobroma cacao GN=TCM_021527 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.6e-19
Identity = 61/120 (50.83%), Postives = 79/120 (65.83%), Query Frame = 1 

Query: 32  FMDGTTSNNSNYSSDSTNRISYYAAAAAQHRRKIEYTRSLSQGSPRRLVPAASY----LG 91
           F  G  +    YS+   +  +     +   R+K+EY RS SQG  RRL+P + +    L 
Sbjct: 12  FPRGIFNLQDRYSNSIMDMRAGKVPTSVVERKKVEYHRSFSQGGARRLLPVSYFSLESLL 71

Query: 92  VLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM 148
           +L+CL ASLLILPL+LPPLPPPP  LLLLLPIGIL +LM+LAFMPSN  ++IT   +TYM
Sbjct: 72  LLVCLTASLLILPLILPPLPPPP-FLLLLLPIGILAVLMILAFMPSN-VRDIT---YTYM 126

[Close]
BLAST of ClCG06G009960 vs. TrEMBL
Match: B9HGA4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s00290g PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-18
Identity = 57/83 (68.67%), Postives = 67/83 (80.72%), Query Frame = 1 

Query: 62  RRKIEYTRSLSQGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLL 121
           +RK+EY RSLSQGS RRL+ A+ +    L +L+CL ASLLILPLVLPPLPPPP M LLLL
Sbjct: 51  KRKMEYNRSLSQGSSRRLLTASHFSLVSLLLLVCLTASLLILPLVLPPLPPPPFM-LLLL 110

Query: 122 PIGILGMLMVLAFMPSNDTKEIT 141
           PIGIL +LM LAFMPSN  ++IT
Sbjct: 111 PIGILVLLMFLAFMPSN-ARDIT 131

[Close]
BLAST of ClCG06G009960 vs. TrEMBL
Match: A0A067K392_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19251 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.2e-18
Identity = 69/153 (45.10%), Postives = 96/153 (62.75%), Query Frame = 1 

Query: 1   MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYF-MDGTTSNNSNYSSDSTNRISYYAAAAA 60
           M+ G  E + R   +R   +NLQ+    HC   + G+ +     +  S +          
Sbjct: 1   MSFGKSETDSRF--SRSAIINLQE----HCSSKIMGSRARKPTTAISSQSSPPPPPRFRV 60

Query: 61  QHRRKIEYTRSLS-QGSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLL 120
             ++K+EY RSLS QGS RRL+P++ +    L +L+CL ASLLILPL+LPPLPPPP  LL
Sbjct: 61  VEQKKMEYQRSLSSQGSARRLLPSSYFSLESLLLLICLTASLLILPLILPPLPPPP-FLL 120

Query: 121 LLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM 148
           LLLPIGILG+LM+LAFMP+N  ++IT   +TY+
Sbjct: 121 LLLPIGILGVLMILAFMPTN-ARDIT---YTYV 142

[Close]
BLAST of ClCG06G009960 vs. TAIR10
Match: AT2G44080.1 (AT2G44080.1 ARGOS-like)

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-20
Identity = 64/138 (46.38%), Postives = 90/138 (65.22%), Query Frame = 1 

Query: 16  RDDFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNR-ISYYAAAAAQHRRKIEYTRSLS-Q 75
           ++D +N+Q+   H+      + +NN +   D   +  S+  +A A    K E  R+LS Q
Sbjct: 9   QNDIINIQE---HY------SLNNNMDVRGDHNRKNTSFRGSAPAPIMGKQELFRTLSSQ 68

Query: 76  GSPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLA 135
            SPRRL+ A+ +    + VL+ L ASLLILPL+LPPLPPPP MLLL+ PIGI+ +LMVLA
Sbjct: 69  NSPRRLISASYFSLESMVVLVGLTASLLILPLILPPLPPPPFMLLLI-PIGIMVLLMVLA 128

Query: 136 FMPSNDTKEITSSSHTYM 148
           FMPS+++K ++SSS T+M
Sbjct: 129 FMPSSNSKHVSSSS-TFM 135

[Close]
BLAST of ClCG06G009960 vs. TAIR10
Match: AT3G59900.1 (AT3G59900.1 auxin-regulated gene involved in organ size)

HSP 1 Score: 75.5 bits (184), Expect = 3.1e-14
Identity = 55/134 (41.04%), Postives = 73/134 (54.48%), Query Frame = 1 

Query: 18  DFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAAQHRRKIEYTRSLSQGSPR 77
           D +N+Q    ++   MD   +N  N S  S+             + K E  RS S    R
Sbjct: 11  DIINIQDSYSNN-RVMDVGRNNRKNMSFRSS-----------PEKSKQELRRSFS-AQKR 70

Query: 78  RLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPS 137
            ++PA  +    L +L+ L ASLLILPLVLPPLPPPP M LLL+PIGI+ +L+VLAFMPS
Sbjct: 71  MMIPANYFSLESLFLLVGLTASLLILPLVLPPLPPPPFM-LLLVPIGIMVLLVVLAFMPS 130

Query: 138 NDTKEITSSSHTYM 148
           + +   T  +  +M
Sbjct: 131 SHSNANTDVTCNFM 130

[Close]
BLAST of ClCG06G009960 vs. TAIR10
Match: AT2G41230.1 (AT2G41230.1 unknown protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.1e-07
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 1 

Query: 83  ASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSND 136
           A  + +LL L+  LLILP  LPPLPPPP   LLLLP+ ++ +L+ LAF PSN+
Sbjct: 27  ARSVALLLFLSLLLLILPPFLPPLPPPP-ATLLLLPLLLMILLIFLAFSPSNE 78

[Close]
BLAST of ClCG06G009960 vs. NCBI nr
Match: gi|700206331|gb|KGN61450.1| (hypothetical protein Csa_2G123610 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 3.2e-61
Identity = 126/147 (85.71%), Postives = 136/147 (92.52%), Query Frame = 1 

Query: 1   MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAAQ 60
           MTLGFQEAEKRGVPN + FL+L Q +Q+H Y MDG+ SNNSN+ SDSTNRI+YYAAAA Q
Sbjct: 1   MTLGFQEAEKRGVPNPNHFLHLHQPSQNHYYSMDGS-SNNSNFGSDSTNRITYYAAAA-Q 60

Query: 61  HRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIG 120
            RRK+EY RSLSQG+PRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIG
Sbjct: 61  DRRKVEYLRSLSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIG 120

Query: 121 ILGMLMVLAFMPSNDTKEITSSSHTYM 148
           ILGMLMVLAFMPSNDTK+ITSSSHTYM
Sbjct: 121 ILGMLMVLAFMPSNDTKDITSSSHTYM 145

[Close]
BLAST of ClCG06G009960 vs. NCBI nr
Match: gi|659082120|ref|XP_008441681.1| (PREDICTED: ARGOS-like protein [Cucumis melo])

HSP 1 Score: 238.8 bits (608), Expect = 6.0e-60
Identity = 124/147 (84.35%), Postives = 134/147 (91.16%), Query Frame = 1 

Query: 1   MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAAQ 60
           MTLGFQEAEKRGVPN + FLNL Q +++H YFMD + SNNSN+ SDSTN I+YYAAAA Q
Sbjct: 1   MTLGFQEAEKRGVPNPNHFLNLHQPSRNHHYFMDAS-SNNSNFGSDSTNTITYYAAAA-Q 60

Query: 61  HRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIG 120
            RRK+EY RS SQG+PRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIG
Sbjct: 61  DRRKVEYLRSPSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIG 120

Query: 121 ILGMLMVLAFMPSNDTKEITSSSHTYM 148
           ILGMLMVLAFMPSNDTK+ITSSSHTYM
Sbjct: 121 ILGMLMVLAFMPSNDTKDITSSSHTYM 145

[Close]
BLAST of ClCG06G009960 vs. NCBI nr
Match: gi|727472049|ref|XP_010517992.1| (PREDICTED: ARGOS-like protein [Camelina sativa])

HSP 1 Score: 109.8 bits (273), Expect = 4.2e-21
Identity = 69/139 (49.64%), Postives = 94/139 (67.63%), Query Frame = 1 

Query: 16  RDDFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAAQHRRKIEYTRSLS-QG 75
           ++D +N+Q+    HC       +NN +   D+   IS+  +A A   RK E  R+LS Q 
Sbjct: 9   QNDIINIQE----HCSL---NNNNNMDMRRDNRKNISFRGSAPAPIMRKQELFRTLSSQN 68

Query: 76  SPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAF 135
           SPRRL+ A+ +    + VL+ L ASLLILPL+LPPLPPPP M LLL+PIGI+ +LMVLAF
Sbjct: 69  SPRRLISASYFSLESMVVLVGLTASLLILPLILPPLPPPPFM-LLLVPIGIMVLLMVLAF 128

Query: 136 MPSNDTK--EITSSSHTYM 148
           MPS+++K  E+TSSS T+M
Sbjct: 129 MPSSNSKHVEVTSSSSTFM 139

[Close]
BLAST of ClCG06G009960 vs. NCBI nr
Match: gi|727449330|ref|XP_010506314.1| (PREDICTED: ARGOS-like protein [Camelina sativa])

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 65/140 (46.43%), Postives = 95/140 (67.86%), Query Frame = 1 

Query: 16  RDDFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAAQHRRKIEYTRSLS-QG 75
           ++D +N+Q+    HC  ++   ++N +   D+   IS+  +A A   RK E  R+LS Q 
Sbjct: 9   QNDIINIQE----HCS-LNNNNNDNMDMRRDNRKNISFRGSAPAPIMRKQELFRTLSSQN 68

Query: 76  SPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAF 135
           SPRRL+ A+ +    + +L+ L ASLLILPL+LPPLPPPP M LLL+PIGI+ +LMVLAF
Sbjct: 69  SPRRLISASYFSLESMVLLVGLTASLLILPLILPPLPPPPFM-LLLVPIGIMVLLMVLAF 128

Query: 136 MPSNDTKEI---TSSSHTYM 148
           MPS+++K +   +SSS T+M
Sbjct: 129 MPSSNSKHVVVTSSSSSTFM 142

[Close]
BLAST of ClCG06G009960 vs. NCBI nr
Match: gi|727453027|ref|XP_010508344.1| (PREDICTED: ARGOS-like protein [Camelina sativa])

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-19
Identity = 67/146 (45.89%), Postives = 93/146 (63.70%), Query Frame = 1 

Query: 16  RDDFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAAQHRRKIEYTRSLS-QG 75
           ++D +N+Q+    HC       +NN +   D+   IS+  +A A   RK E  R+LS Q 
Sbjct: 9   QNDIINIQE----HCSL---NNNNNMDMRRDNRKNISFRGSAPAPIMRKQELFRTLSSQN 68

Query: 76  SPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAF 135
           SPRRL+ A+ +    + VL+ L ASLLILPL+LPPLPPPP M LLL+PIGI+ +LMVLAF
Sbjct: 69  SPRRLISASYFSLESMVVLVGLTASLLILPLILPPLPPPPFM-LLLVPIGIMVLLMVLAF 128

Query: 136 MPSNDTKEI---------TSSSHTYM 148
           MPS+++K +         +SSS T+M
Sbjct: 129 MPSSNSKHVVVTSSSSSSSSSSSTFM 146

The following BLAST results are available for this feature:
BLAST of ClCG06G009960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARL_ARATH3.0e-1946.38ARGOS-like protein OS=Arabidopsis thaliana GN=ARL PE=2 SV=1[more]
ARGOS_BRARP1.1e-1342.11Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. peki... [more]
ARGOS_ARATH5.5e-1341.04Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana GN=A... [more]
ARGOS_ORYSJ2.8e-0958.93Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japon... [more]
ORS1_ARATH3.8e-0654.72Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana GN=ORS1 PE=2 SV=1[more]
BLAST of ClCG06G009960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHQ4_CUCSA2.2e-6185.71Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123610 PE=4 SV=1[more]
R0FYH8_9BRAS2.7e-1947.01Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024269mg PE=4 SV=1[more]
A0A061ERG1_THECC3.6e-1950.83Auxin-regulated gene involved in organ size OS=Theobroma cacao GN=TCM_021527 PE=... [more]
B9HGA4_POPTR2.3e-1868.67Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s00290g PE=4 SV=1[more]
A0A067K392_JATCU5.2e-1845.10Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19251 PE=4 SV=1[more]
BLAST of ClCG06G009960 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44080.11.7e-2046.38 ARGOS-like[more]
AT3G59900.13.1e-1441.04 auxin-regulated gene involved in organ size[more]
AT2G41230.12.1e-0754.72 unknown protein[more]
BLAST of ClCG06G009960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206331|gb|KGN61450.1|3.2e-6185.71hypothetical protein Csa_2G123610 [Cucumis sativus][more]
gi|659082120|ref|XP_008441681.1|6.0e-6084.35PREDICTED: ARGOS-like protein [Cucumis melo][more]
gi|727472049|ref|XP_010517992.1|4.2e-2149.64PREDICTED: ARGOS-like protein [Camelina sativa][more]
gi|727449330|ref|XP_010506314.1|1.3e-1946.43PREDICTED: ARGOS-like protein [Camelina sativa][more]
gi|727453027|ref|XP_010508344.1|3.0e-1945.89PREDICTED: ARGOS-like protein [Camelina sativa][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G009960.1ClCG06G009960.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG06G009960Cla97C06G119410Watermelon (97103) v2wcgwmbB273
ClCG06G009960Lsi09G010760Bottle gourd (USVL1VR-Ls)lsiwcgB031
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG06G009960Cucurbita pepo (Zucchini)cpewcgB177
ClCG06G009960Cucumber (Gy14) v2cgybwcgB141
ClCG06G009960Melon (DHL92) v3.6.1medwcgB381
ClCG06G009960Silver-seed gourdcarwcgB0717
ClCG06G009960Cucumber (Chinese Long) v3cucwcgB159
ClCG06G009960Wax gourdwcgwgoB497
ClCG06G009960Cucumber (Gy14) v1cgywcgB464
ClCG06G009960Cucurbita maxima (Rimu)cmawcgB268
ClCG06G009960Cucurbita moschata (Rifu)cmowcgB258
ClCG06G009960Wild cucumber (PI 183967)cpiwcgB154
ClCG06G009960Cucumber (Chinese Long) v2cuwcgB151
ClCG06G009960Melon (DHL92) v3.5.1mewcgB391
ClCG06G009960Watermelon (97103) v1wcgwmB344
ClCG06G009960Watermelon (97103) v1wcgwmB349