ClCG06G003980 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G003980
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr06 : 4565195 .. 4568524 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAATAGTAACCAACTCCATGATTTGGTAGAAGCCATCTCTGTCCTCACCGAGACTTTCGATGACACGTTTGACCTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCGTTGCATTTTAGCACTACAATTATCCCCTAGTTTCTTCGATGTATATGCTTGCAACAAACTTGAGTATAAACTTGTTTACATCCAAAACTTTTATCATACTAAGTTCAATCTCCAACGCAATGGTTTTACTGAGTTGGGTTTCGCTTGTTTTGATTCTGACCAAGAGCCTGGTTTGTACTCTTTTTTCCATTTTCTTTATTCTATTTCTATTATATTCTTCTTTCTTTATTATCTCCATAGCTTTGAAATAAACAATCTTTTATCTTTCTTCATATTTTAGGTTCGTTTCATAATCATCTTTTCATTTCATTTTCAAATTGTTGTATTTCTTGATTTTCACATTTCTTGACATTGAATTCTTAGTCTTTTCTCCAAACAAATTTCTTGAAAAATACATTTTTTTTCTTAGTTTTCAAAAGTTTACTTGGCTGATCTTGCATAAACGTTGGTGTTTATAAACTTATTTTCAAAAATAAAAAATTAGGATGACCTTGTTTTTAATTATTTGGTTTTTGATTTTTGATTTTTGAAATTTTTTGCTTGTTTTCCTTTTAACTTCCTTGTCATGGTTTTAAATTTTCAATTTTGATACTTCCTTCTCTTTTATGTTCGTAAGATTTGAAATTACCTTTCTTCATAATTTAGGTTTTCTTTGGTAATGATTTTTTTAAAACTTGATCTTGAAATTTTTTATACTTGTTTTTCTCTTAAAATTCAATGCCATGATTTTTGCATTTCACTTGTTTTTCTCTTAAAATTCTATGCCATGATTTTTGCATTTCTTGAAGAGACATTGAATTCTTAGTCATTTTTCCTTTTTTTTTTTTTTAAAGAAAGATAGTTCTTTTTTTTCAAAATCTGCCTTAATTCTTGAAAAGTTGGTGAAAATTAATTAATAAAACAACAAAACTTACGAGTGAAAGTAGTGTCTATAAAATTAATTTTTTTAAAAAAAAAATAGTTTTTTTTTTTCAAAATCTGCCTTAAGTCTTGAAAAGTTGGTGAAAATTAATTAATAAAACAACAAAACTTACGAGTGAAAGTAGTGTCTATAAAATTAATTTTTTTAAAAAAAAAAAAAAAAAAAAAACTAAGATGATCCTAGTTTTATAACCATGTCGATTTTATACTTTTGATAATTATGCTTGTTTACAACTTCTTTGACATAGCTTTCATTGTCATATATGGTTTGATATTTAAAAACATTAGTGAAACGAGATAGATATAAGAAATCAATAGATATAGGTGGTGTTTATAAATATTTAGCTAACAAAGCCTTAATAATCATTTTAAGCTTTTAACGAATTCACAATAGCTAATTAGACCTTGAATTTTGTGGCCATTCAAAATTTCGTCCGTTTTTATTAATTGACCATCTCTCTTCAGGATACCAAGCTCGAAATGATATCCGGATGCTTCTTGATATTGATGAAGATGGTTTGTAATGTCTAACTTGATTCAATTTCGATTATTCCTTCTTTATTATGTTATACATTTGAAATAACAATCTTACCTTTCTCCATAATTTAGGTCGTTTGATAATGATATATTTTAATTTGATTTTGAAATTTATATACTTCTTGGTTTTAACTTTTTCTTGAAGAAATATTGAATTTTTAGTCCTTTTTTACAACAAGTTTTTTTAGTTTCCAAAATTTGGTTGGGTTCTTAAAAACATTGGTAAAATTTGGTTAACAAAACAACAAAGCTTATGTAGAATCTATTAGCTTAATTTTAAAAAATAAAAAGTAAAAAAACTAGAACGACCCTATTTCATAACTATCTGGTTTTCGATTTTTTTTAAAAAGCTATTATGCTTCTTTTCTTACAATTCCTCTATTATGATTTTCATTTTCACATATTGTTTTTAGTTATCAAAATATTGTTTTATAAGCTTAATTTTCAAAAATCGAAAACTAAAACTAAGGTCTCGTTTGGTAACCATTTGGTTTTTGGTTTTTGAAAATTAAGACTATTTCCTTCACATTTTTTTTTATAATGATTTGCATATTTCTTAACTACAATGGTTGAATTCTAAGTAAAATTCCAAAAACAAAACTAAGTTTTCAAAAACTATATATTTTTTTTTGTTTTTAAATTTTGGCTTGATTTTTTAAACTATTGGGCCTAAATAGTTACCAAATGGCGCTTAAATGGTTATGGGTTAAAATTTTTTTTAACAAATTCACACAAATTAATTAGACCTTTAATTTGATTGACATTAAAATTTTCATTGGTTTTTATTCATTGACCATCTGTCTTCAGGATACCTAGATCGAAATGCGGTTCGAATCTTTGCTAATCCTGAAGCTGGTTTGTAATTACTTACTTGAGCCATTTGAATTGATTCTTTAATTTTGAATTAATTAGAATCTCATTTAATTTTCTAATTTCCCTTTTTGGGATCTTTCTTTTAGGTACTTATGAGAGAAATGATCTACCATTTTGTGCTTCGACTGATAGGATGGACGATACTTTCGAATTTGATTGTGCAAATTTTGTCTCCATTGAATCACAAGAGTTCATAAACATTATCACACGGTTTAGTAATTTTGATAATGGTAATAATATAATTGTAACTCAACAATTCTTCCCTTCACATACTATTTTGAAAGAAATTAAGTAGTTCAATGTTTTGTGATCTTGTTACAGTTCTTGTTACTCTATCAAGTTCACAAGTCAAGTTCTCTTATGGAAGCACACAGATTTTTCTAACTAAAGAGGTAAATATTTGGGTCTCTTTTGATGTTTAGGAAATTATTAATTAGACCATTGATTTTATAGACATGTTTGAAGATTAATGGTAGAGTGTAATGCTTGAAATAGTTAAAATTTTAATTGTTACAAGTGAATCAATTTTAACTCTTGTTTAATATTTACTTTGAAAATCCTTCATGCATCTATTCACTTACATGTGTATAGAGAATTCTTCAAACGTTGGATTACCAATATGGACGATTAGGAAAGTTTGATACAATGTTATATGCAGGAAAACCAATGCATTATTGGAGGTATTGGAGAGAGTGATCAAATTATTTTTGCAATAACTCTCCAACCAACGGAATTATTTAGCAATTTTGTAAGTCGATCCAAAAGGGTATGGTTATTCAAATCAAATAATTCACTTAAAGGTGTAATAGCTGCCCCTTTAGGATTGTATGCTCGATATGTGGCCTATTTTCCTTATAGGAGATAA

mRNA sequence

ATGGTTAATAGTAACCAACTCCATGATTTGGTAGAAGCCATCTCTGTCCTCACCGAGACTTTCGATGACACGTTTGACCTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCGTTGCATTTTAGCACTACAATTATCCCCTAGTTTCTTCGATGTATATGCTTGCAACAAACTTGAGTATAAACTTGTTTACATCCAAAACTTTTATCATACTAAGTTCAATCTCCAACGCAATGGTTTTACTGAGTTGGGTTTCGCTTGTTTTGATTCTGACCAAGAGCCTGGTACTTATGAGAGAAATGATCTACCATTTTGTGCTTCGACTGATAGGATGGACGATACTTTCGAATTTGATTGTGCAAATTTTGTCTCCATTGAATCACAAGAGTTCATAAACATTATCACACGGTTTAGTAATTTTGATAATGTTCTTGTTACTCTATCAAGTTCACAAGTCAAGTTCTCTTATGGAAGCACACAGATTTTTCTAACTAAAGAGAGTGATCAAATTATTTTTGCAATAACTCTCCAACCAACGGAATTATTTAGCAATTTTGTAAGTCGATCCAAAAGGGTATGGTTATTCAAATCAAATAATTCACTTAAAGGTGTAATAGCTGCCCCTTTAGGATTGTATGCTCGATATGTGGCCTATTTTCCTTATAGGAGATAA

Coding sequence (CDS)

ATGGTTAATAGTAACCAACTCCATGATTTGGTAGAAGCCATCTCTGTCCTCACCGAGACTTTCGATGACACGTTTGACCTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCGTTGCATTTTAGCACTACAATTATCCCCTAGTTTCTTCGATGTATATGCTTGCAACAAACTTGAGTATAAACTTGTTTACATCCAAAACTTTTATCATACTAAGTTCAATCTCCAACGCAATGGTTTTACTGAGTTGGGTTTCGCTTGTTTTGATTCTGACCAAGAGCCTGGTACTTATGAGAGAAATGATCTACCATTTTGTGCTTCGACTGATAGGATGGACGATACTTTCGAATTTGATTGTGCAAATTTTGTCTCCATTGAATCACAAGAGTTCATAAACATTATCACACGGTTTAGTAATTTTGATAATGTTCTTGTTACTCTATCAAGTTCACAAGTCAAGTTCTCTTATGGAAGCACACAGATTTTTCTAACTAAAGAGAGTGATCAAATTATTTTTGCAATAACTCTCCAACCAACGGAATTATTTAGCAATTTTGTAAGTCGATCCAAAAGGGTATGGTTATTCAAATCAAATAATTCACTTAAAGGTGTAATAGCTGCCCCTTTAGGATTGTATGCTCGATATGTGGCCTATTTTCCTTATAGGAGATAA

Protein sequence

MVNSNQLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKLEYKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGTYERNDLPFCASTDRMDDTFEFDCANFVSIESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFLTKESDQIIFAITLQPTELFSNFVSRSKRVWLFKSNNSLKGVIAAPLGLYARYVAYFPYRR

Homology

[Close]

BLAST of ClCG06G003980 vs. TrEMBL
Match: A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-24
Identity = 83/245 (33.88%), Postives = 123/245 (50.20%), Query Frame = 1


Query: 5   NQLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNK 64
           N +  LV+A + L    D   D  FS   F +MA ++ S    + LQL P FFD Y C  
Sbjct: 9   NNMRTLVDAFATLGLA-DHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDHYFCRD 68

Query: 65  LEYKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGTYERND-----------LPFCA 124
           L+    +    +     L+  G+T   F+    D      E              L FC 
Sbjct: 69  LKNSWFFFSEIFPLAQYLKDFGYTSFSFS-IGRDPHHAQIEFQGPTRLLLEVTLRLVFCH 128

Query: 125 STDRMDDTFEFDCANFVSIESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFLT-- 184
              R+    +FD + FVS++SQ+F N+I+++  FD+V VT++S +V FSY + Q  +   
Sbjct: 129 LPLRIH---QFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILSP 188

Query: 185 ----------KESDQIIFAITLQPTELFSNFVSRSKRVWLFKSNNSLKGVIAAPLGLYAR 227
                     +  D++ F ITL P E+F++  S++KRVW FK  NS +G+I APLGL AR
Sbjct: 189 QNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNAR 248

[Close]

BLAST of ClCG06G003980 vs. TrEMBL
Match: A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.3e-19
Identity = 72/227 (31.72%), Postives = 104/227 (45.81%), Query Frame = 1


Query: 26  DLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKLEYKLVY-IQNFYHTKFNLQR 85
           D  FS   F IMA +  S      +QL P FFD +  + +     + + + +     L  
Sbjct: 29  DAIFSPDTFCIMADSDASIHSAFGVQLWPPFFDSFYSDDIRQLFWFRLTHLFTLAVELLE 88

Query: 86  NGFTELGFACFDSDQEPGTYERNDLPFCASTDRMDDTF-------------EFDCANFVS 145
           +G+T L F+      E   Y      F      + D               + D + FVS
Sbjct: 89  SGYTSLTFSI-----ERFRYNYAQFKFEGPNGLLRDVNFLLTPVVRPLRIGQIDLSAFVS 148

Query: 146 IESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFLTKESD------------QIIF 205
           ++S+EF NII+ +  FD V V ++S +V FSY   Q  +    D            Q+ F
Sbjct: 149 MDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQETIITPEDGQCLIGGVRAPNQVQF 208

Query: 206 AITLQPTELFSNFVSRSKRVWLFKSNNSLKGVIAAPLGLYARYVAYF 227
            IT+     F +F S+SKR+WLFK  NS KG+I APLGLY R V++F
Sbjct: 209 IITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPLGLYGRLVSFF 250

[Close]

BLAST of ClCG06G003980 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-17
Identity = 75/248 (30.24%), Postives = 119/248 (47.98%), Query Frame = 1


Query: 1   MVNSNQLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVY 60
           M +   L   ++AI +L+  F +  +++ S S FS++     +    +A Q+ P FF+ +
Sbjct: 1   MFSLENLDPFLDAIYILSR-FGENANIECSPSMFSLIVPHH-NLELNVAFQMMPQFFNYF 60

Query: 61  ACNKLEYKLVYIQNFYHTKFNLQRNGFTELGF---ACFDSDQEPGTYERNDLPF------ 120
             N+     + IQ  ++T   ++    T L F      D      +  RN+LP       
Sbjct: 61  FSNRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRM 120

Query: 121 -CASTDRMDDTFEFDCANFVSIESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFL 180
            CA  + M +    D   FVSI+SQ+F  ++T   ++  V VT + S V+FS    +   
Sbjct: 121 RCAVKEDMGN---IDLETFVSIDSQQFRRVVTGCRDYF-VRVTTTHSHVRFSNEIKEFIF 180

Query: 181 TKESDQII-----------FAITLQPTELFSNFVSRSKRVWLFKSNNSLKGVIAAPLGLY 228
            +E  + I           F I + PT +F N   R+KRVWLFKS + L   I AP+GL+
Sbjct: 181 AREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLF 240

[Close]

BLAST of ClCG06G003980 vs. TrEMBL
Match: A0A0A0KA18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.9e-17
Identity = 70/222 (31.53%), Postives = 106/222 (47.75%), Query Frame = 1


Query: 26  DLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKLEYKLVY-IQNFYHTKFNLQR 85
           D  FS   F I+A +  S +    LQL P FFD +  + L     + + + +     L  
Sbjct: 29  DAIFSPDMFCILADSDVSLQSAFGLQLWPPFFDSFYSDNLRQIFWFRLTHLFPLALELLE 88

Query: 86  NGFTELGFAC--FDSDQEPGTYERNDLPFCASTDRMDDTF------EFDCANFVSIESQE 145
           +G T L F+   F  +     +E  +        R+          + D + FV+++SQE
Sbjct: 89  SGCTSLTFSIERFRHNYAQFKFEGPNGLLREVNFRLTPIVRPLRIGQIDLSAFVTMDSQE 148

Query: 146 FINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFLTKESD------------QIIFAITLQ 205
           F  II++++ FD V V ++S +V FS  + Q       D            Q+ F IT+ 
Sbjct: 149 FSYIISQYNMFDYVEVIITSRRVSFSSSTIQETTISAEDGRCIVGGVRAPVQVQFIITMS 208

Query: 206 PTELFSNFVSRSKRVWLFKSNNSLKGVIAAPLGLYARYVAYF 227
               F +F S+SKR+WLFK  NS KG+I APLGLY R V++F
Sbjct: 209 QPNAFFHFASQSKRIWLFKEVNSTKGIITAPLGLYGRLVSFF 250

[Close]

BLAST of ClCG06G003980 vs. TrEMBL
Match: A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.6e-13
Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = 1


Query: 111 FCASTDRMDDTFEFDCANFVSIESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFL 170
           F  S  R +D  E D   F SI+S     I T   ++D  LVTL++S+VKFS    +I L
Sbjct: 34  FPLSPSREEDVGEIDYGIFFSIDSLVLRFIATELDDYD-ALVTLTNSEVKFSVNDKEISL 93

Query: 171 TKESDQII-----------FAITLQPTELFSNFVSRSKRVWLFKSNNSLKGVIAAPLGLY 228
            KE D+ I           F + L P  LF +  ++S+R+W+FKS NS   +I AP+GLY
Sbjct: 94  YKEVDECIIGGVADEEESRFFVYLNPKILFRDLANKSERIWMFKSPNSY-SIIVAPIGLY 153

[Close]

BLAST of ClCG06G003980 vs. NCBI nr
Match: gi|659116807|ref|XP_008458269.1| (PREDICTED: uncharacterized protein LOC103497738 [Cucumis melo])

HSP 1 Score: 132.5 bits (332), Expect = 9.4e-28
Identity = 79/178 (44.38%), Postives = 106/178 (59.55%), Query Frame = 1


Query: 6   QLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDV-YACNK 65
           ++H  V+A+SVL       F+LKFS   FSIMA  +PS  C +ALQL P FF+  Y+C +
Sbjct: 8   EIHSFVDAVSVLAG-LGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQ 67

Query: 66  LEYKLVYIQNFYHTKFNLQRNGFTELGFACFDS-------DQEPGTYERNDLPFCASTDR 125
           L Y  +YI  F+   F+++R GF+ L F+  DS           G     D P   S   
Sbjct: 68  LHYSWIYINPFFPEMFDMERTGFSSLTFSFADSLHADLTFCSRDGHLREIDFPMYHSDGS 127

Query: 126 MDDTFE-FDCANFVSIESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFLTKES 175
           MD  ++  D   FVS  SQEFINI+T  +NFD+VLVTL++SQVKFSY  TQ+ LT+E+
Sbjct: 128 MDACYDQLDWETFVSFSSQEFINIVT-LNNFDSVLVTLTNSQVKFSYAGTQMILTQET 183

[Close]

BLAST of ClCG06G003980 vs. NCBI nr
Match: gi|659119586|ref|XP_008459734.1| (PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo])

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26
Identity = 85/244 (34.84%), Postives = 131/244 (53.69%), Query Frame = 1


Query: 5   NQLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNK 64
           N +  L++A++ L    D   D  FS   F +M  ++ S    + LQL P FFD Y C++
Sbjct: 8   NNMQTLIDALATLGVA-DQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDHYFCSE 67

Query: 65  LEYKLVYIQNFYHTKFNLQRNGFTELGFACFDSD-------QEPG--TYERN-DLPFCAS 124
           L+Y   +    +    +LQ +G+T   F+   +        Q P    +E N +L +   
Sbjct: 68  LQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPDLAQIKFQGPNGLLHETNFELVYSHH 127

Query: 125 TDRMDDTFEFDCANFVSIESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFLT--- 184
             R+ D   FD + FVS++SQEF N+I+++  FD+V VT++S +V FSY   Q  +    
Sbjct: 128 PLRIPD---FDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETILNQQ 187

Query: 185 ---------KESDQIIFAITLQPTELFSNFVSRSKRVWLFKSNNSLKGVIAAPLGLYARY 227
                    K  +Q+ F +TL P+E+F++  S++KRVW FK  NS KG+I APLGL +R 
Sbjct: 188 NGQCIIGGIKAPNQVQFILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAPLGLNSRL 247

[Close]

BLAST of ClCG06G003980 vs. NCBI nr
Match: gi|659117587|ref|XP_008458680.1| (PREDICTED: uncharacterized protein LOC103498008 [Cucumis melo])

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25
Identity = 73/159 (45.91%), Postives = 93/159 (58.49%), Query Frame = 1


Query: 6   QLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKL 65
           Q+H  +EAISVLTET +D FDLKFS + FSIM A SPSSRCI++LQLSP  F  Y C  L
Sbjct: 8   QIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTL 67

Query: 66  EYKLVYIQNFYHTKFNLQRNGFTELGFACFDSD---------------QEPGTYERNDLP 125
            +K ++ + F  T    Q  GF+ L F+  + D                E G +    + 
Sbjct: 68  HHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDTYGSDALLQFTNSERGCHMIKTVR 127

Query: 126 FCASTDRMDDTFEFDCANFVSIESQEFINIITRFSNFDN 150
              S++++ D  EFD   FVSIESQEFINII RF +FDN
Sbjct: 128 LYPSSEKI-DVGEFDFGTFVSIESQEFINIIKRFVDFDN 165

[Close]

BLAST of ClCG06G003980 vs. NCBI nr
Match: gi|778686236|ref|XP_011652354.1| (PREDICTED: uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus])

HSP 1 Score: 121.7 bits (304), Expect = 1.7e-24
Identity = 83/242 (34.30%), Postives = 123/242 (50.83%), Query Frame = 1


Query: 5   NQLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNK 64
           N +  LV+A + L    D   D  FS   F +MA ++ S    + LQL P FFD Y C  
Sbjct: 9   NNMRTLVDAFATLGLA-DHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDHYFCRD 68

Query: 65  LEYKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGTYERND-----------LPFCA 124
           L+    +    +     L+  G+T   F+    D      E              L FC 
Sbjct: 69  LKNSWFFFSEIFPLAQYLKDFGYTSFSFS-IGRDPHHAQIEFQGPTRLLLEVTLRLVFCH 128

Query: 125 STDRMDDTFEFDCANFVSIESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFLT-- 184
              R+    +FD + FVS++SQ+F N+I+++  FD+V VT++S +V FSY + Q  +   
Sbjct: 129 LPLRIH---QFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILSP 188

Query: 185 -------KESDQIIFAITLQPTELFSNFVSRSKRVWLFKSNNSLKGVIAAPLGLYARYVA 227
                  +  D++ F ITL P E+F++  S++KRVW FK  NS +G+I APLGL AR VA
Sbjct: 189 QCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNARLVA 245

[Close]

BLAST of ClCG06G003980 vs. NCBI nr
Match: gi|778686233|ref|XP_004146827.2| (PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 3.7e-24
Identity = 83/245 (33.88%), Postives = 123/245 (50.20%), Query Frame = 1


Query: 5   NQLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNK 64
           N +  LV+A + L    D   D  FS   F +MA ++ S    + LQL P FFD Y C  
Sbjct: 9   NNMRTLVDAFATLGLA-DHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFFDHYFCRD 68

Query: 65  LEYKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGTYERND-----------LPFCA 124
           L+    +    +     L+  G+T   F+    D      E              L FC 
Sbjct: 69  LKNSWFFFSEIFPLAQYLKDFGYTSFSFS-IGRDPHHAQIEFQGPTRLLLEVTLRLVFCH 128

Query: 125 STDRMDDTFEFDCANFVSIESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFLT-- 184
              R+    +FD + FVS++SQ+F N+I+++  FD+V VT++S +V FSY + Q  +   
Sbjct: 129 LPLRIH---QFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQETILSP 188

Query: 185 ----------KESDQIIFAITLQPTELFSNFVSRSKRVWLFKSNNSLKGVIAAPLGLYAR 227
                     +  D++ F ITL P E+F++  S++KRVW FK  NS +G+I APLGL AR
Sbjct: 189 QNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNAR 248

The following BLAST results are available for this feature:

BLAST of ClCG06G003980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIF2_CUCSA	2.6e-24	33.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1	[more]
A0A0A0KFM5_CUCSA	7.3e-19	31.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1	[more]
A0A0A0K7E0_CUCSA	2.3e-17	30.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1	[more]
A0A0A0KA18_CUCSA	8.9e-17	31.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1	[more]
A0A0A0KCY3_CUCSA	4.6e-13	39.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1	[more]

BLAST of ClCG06G003980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116807\|ref\|XP_008458269.1\|	9.4e-28	44.38	PREDICTED: uncharacterized protein LOC103497738 [Cucumis melo]	[more]
gi\|659119586\|ref\|XP_008459734.1\|	1.0e-26	34.84	PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo]	[more]
gi\|659117587\|ref\|XP_008458680.1\|	1.2e-25	45.91	PREDICTED: uncharacterized protein LOC103498008 [Cucumis melo]	[more]
gi\|778686236\|ref\|XP_011652354.1\|	1.7e-24	34.30	PREDICTED: uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus]	[more]
gi\|778686233\|ref\|XP_004146827.2\|	3.7e-24	33.88	PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G003980.1	ClCG06G003980.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG06G003980	Csa6G002320	Cucumber (Chinese Long) v2	cuwcgB480
ClCG06G003980	Cla009196	Watermelon (97103) v1	wcgwmB344
ClCG06G003980	Cla97C06G113370	Watermelon (97103) v2	wcgwmbB273
ClCG06G003980	Cla97C06G113470	Watermelon (97103) v2	wcgwmbB274
ClCG06G003980	CSPI06G00300	Wild cucumber (PI 183967)	cpiwcgB507
ClCG06G003980	Lsi09G015470	Bottle gourd (USVL1VR-Ls)	lsiwcgB029
ClCG06G003980	MELO3C035217.2	Melon (DHL92) v3.6.1	medwcgB119
ClCG06G003980	CsaV3_6G000360	Cucumber (Chinese Long) v3	cucwcgB502

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG06G003980	Cucurbita maxima (Rimu)	cmawcgB328
ClCG06G003980	Cucurbita maxima (Rimu)	cmawcgB800
ClCG06G003980	Cucurbita moschata (Rifu)	cmowcgB325
ClCG06G003980	Melon (DHL92) v3.5.1	mewcgB124
ClCG06G003980	Cucurbita pepo (Zucchini)	cpewcgB144
ClCG06G003980	Cucumber (Gy14) v2	cgybwcgB443
ClCG06G003980	Silver-seed gourd	carwcgB0073
ClCG06G003980	Wax gourd	wcgwgoB504
ClCG06G003980	Cucumber (Gy14) v1	cgywcgB228