ClCG05G026950 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATTCACGGTTCGAGGTCTGAAGGTTCCGCCGAATTCCGCGAGCCTTGAAGAAGCCCGGAATCGAGTCTTCGACTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTAGATGATGTCGCTACTGTTTCTCAGCTCCGTTCTACGATCGCCTCCGAGATCCGCAAGAATTCCCACGTCACCGACCCTAAGGTCTTCTCGTTTCTGCAATTTTCTTTATTTGCGTCTTAATTCTATATGATTTTGGGGGCGGCTTAAGGAATTTTGTTGAATCTTTCATTTCTTTTATGGGTTGAGAAACTATGAAGAATATTCCCTCTGTCGATTAGAGACATCTAAGGAAGGAATTTTGAAGCTGTCTTTTCCATTCATTTGAAACGAAAGCTTTAATAGAAATAGAAAACGAAGAAAAGAGTTTAGAGGGCTTACCTTTCTCGTTCTTGTAATCAATGTAAATCTATCATTCTGGAGGGTTTTTTGTTTTTTAATTTTTAATAATAATAATAATAATAATAAAATCTTCTAGCGGGTTATTTGCTGAAGCAAATAGAAATTGGTGCCCTGGGGATTTTTCAATTGCAGTGCAGCCCGACGACTTATTGAACTTGGATAAGTTCTCTCCTAAAGAGCGGGCATATTAG ATGGCATTCACGGTTCGAGGTCTGAAGGTTCCGCCGAATTCCGCGAGCCTTGAAGAAGCCCGGAATCGAGTCTTCGACTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTAGATGATGTCGCTACTGTTTCTCAGCTCCGTTCTACGATCGCCTCCGAGATCCGCAAGAATTCCCACGTCACCGACCCTAAGCCCGACGACTTATTGAACTTGGATAAGTTCTCTCCTAAAGAGCGGGCATATTAG ATGGCATTCACGGTTCGAGGTCTGAAGGTTCCGCCGAATTCCGCGAGCCTTGAAGAAGCCCGGAATCGAGTCTTCGACTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTAGATGATGTCGCTACTGTTTCTCAGCTCCGTTCTACGATCGCCTCCGAGATCCGCAAGAATTCCCACGTCACCGACCCTAAGCCCGACGACTTATTGAACTTGGATAAGTTCTCTCCTAAAGAGCGGGCATATTAG MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSTIASEIRKNSHVTDPKPDDLLNLDKFSPKERAY
BLAST of ClCG05G026950 vs. Swiss-Prot
Match: NDUA6_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thaliana GN=At3g12260 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.1e-21 Identity = 49/74 (66.22%), Postives = 57/74 (77.03%), Query Frame = 1
BLAST of ClCG05G026950 vs. TrEMBL
Match: A0A0A0KRV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G624440 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 9.2e-31 Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 1
BLAST of ClCG05G026950 vs. TrEMBL
Match: A0A061FR11_THECC (LYR family of Fe/S cluster biogenesis protein OS=Theobroma cacao GN=TCM_045026 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 3.1e-26 Identity = 61/76 (80.26%), Postives = 68/76 (89.47%), Query Frame = 1
BLAST of ClCG05G026950 vs. TrEMBL
Match: A0A0D2VQ58_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G218700 PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.2e-25 Identity = 60/76 (78.95%), Postives = 69/76 (90.79%), Query Frame = 1
BLAST of ClCG05G026950 vs. TrEMBL
Match: A0A0B0PLZ1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_03720 PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.0e-25 Identity = 59/76 (77.63%), Postives = 69/76 (90.79%), Query Frame = 1
BLAST of ClCG05G026950 vs. TrEMBL
Match: A0A067KWF8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24545 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.4e-25 Identity = 60/76 (78.95%), Postives = 69/76 (90.79%), Query Frame = 1
BLAST of ClCG05G026950 vs. TAIR10
Match: AT3G12260.1 (AT3G12260.1 LYR family of Fe/S cluster biogenesis protein) HSP 1 Score: 103.6 bits (257), Expect = 6.3e-23 Identity = 49/74 (66.22%), Postives = 57/74 (77.03%), Query Frame = 1
BLAST of ClCG05G026950 vs. NCBI nr
Match: gi|659092257|ref|XP_008446979.1| (PREDICTED: NADH dehydrogenase [ubiquinone]) HSP 1 Score: 142.9 bits (359), Expect = 2.7e-31 Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 1
BLAST of ClCG05G026950 vs. NCBI nr
Match: gi|449449258|ref|XP_004142382.1| (PREDICTED: NADH dehydrogenase [ubiquinone]) HSP 1 Score: 140.6 bits (353), Expect = 1.3e-30 Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 1
BLAST of ClCG05G026950 vs. NCBI nr
Match: gi|1009153610|ref|XP_015894726.1| (PREDICTED: NADH dehydrogenase [ubiquinone]) HSP 1 Score: 125.6 bits (314), Expect = 4.4e-26 Identity = 59/76 (77.63%), Postives = 71/76 (93.42%), Query Frame = 1
BLAST of ClCG05G026950 vs. NCBI nr
Match: gi|590568839|ref|XP_007010910.1| (LYR family of Fe/S cluster biogenesis protein [Theobroma cacao]) HSP 1 Score: 125.6 bits (314), Expect = 4.4e-26 Identity = 61/76 (80.26%), Postives = 68/76 (89.47%), Query Frame = 1
BLAST of ClCG05G026950 vs. NCBI nr
Match: gi|823247658|ref|XP_012456498.1| (PREDICTED: NADH dehydrogenase [ubiquinone]) HSP 1 Score: 123.6 bits (309), Expect = 1.7e-25 Identity = 60/76 (78.95%), Postives = 69/76 (90.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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