ClCG05G021890 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G021890
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Nuclear transport factor 2 (NTF2) family protein
Location	CG_Chr05 : 33905294 .. 33908606 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTGTGGACGCAAAGGCTTCCGGCTTTGCTTCGCTGCCGAGAAAATTGGACCATTCTCGAAGAATCAAACTCGCTCCGGTAATCATCAACTTCTTTCTTCTTCGTCTCACTCATCTGCATATTTGTTTAATCATTCTCTTCTCTTTACTTTATCTGGAACAATCTGGAAATTCCTTCTATACTAGGCTTCCTTCCTTACTGTTCCTAGAAATGCCGGGAGATGGTGGAATCACTGCGGATCCAACCATCGAAGCCTGCAGCAAGGAGGCAAGCGACTCCAAATTCGCGAAGCGTTTTGCCGACGATATCATGCCTCACGTCCTCAATCTGTGAGTTCCTTTCTTGATTCTCTCTTGTTTTTTAACTTTTTTTTTTTTTTTTTTTTTGAACGATGAGATTAACCTTCTAGGTATGGATCTTCTGCAACGCCTCGGGATTTTGAAATCTACGCTCCCGATGCTTCGTTCGAGGATCCATTAACGAGAGCTCACGGGTATGTATGGTTGGATTGGATTTTAGAAGATGAACCTGTTGATTTATGATTCATATATTTGAAAAAGCAATTGAAAGATCATTAGTGACGATAACGAGATAAGTAGCATTTGTTTTGTATTAAGTTGTAATTGTTTATTTAAGAGTTGCTCTGTTTTTCGGTTCTGCAGAGTGAAGGAAATCAAATCGGCATTTTATTCTTTGTCCAAGGTTCTTATCACTTTCCACTTTTCGCAATTGATTCCTTTAATTTCGGCATATAACATAGCACGTTTACGATTGAAAGTTCGCTCAACTTTGTTTCTGTTCTGGAGGAGAACTATTTTCTCCTTTGAAATTGCTAATATGAATACAATTATCAAATCAGATGAGCTAATTATTTTTGGATTAATTGAGAACCAAAAGCTTAAACTTATAGGTTATAGTAAATTTCTTTGTATCTAACATTTTAACACTCCTTTTATTGGCTTGAAAATTTGTAGAAGGTTCAGCCAGTTGAAATCGATATTAGTTGGAGAAAAAATGACAATACAGGACTTCTTTCTTTGATGCCAATTCTCCGGATGTCCTAAAAGCTTGAGCTTATGGGTTATGATAAATTTAAATTTAATTCACCAACTGAATGTTCTTCCTTTTGAATTTATTGCTTTGGAGGCATGCCTTGAAGTAGTTGCTTAGAAAGCAAAGCAGTTGTATTGGAACTAGAAGTTCACCCAAAGTGACACTATTTTGAGAGGCGTGTTGAGATCCACATTGAAACCCATATTATCTAACTGATAAGATATTTTATACTTTCGTTATACAAGGCATCAAAGTGATATTTTAGAGACACTGTAGTCTGAACTAGAGCACAGTCGCCATATATTGGACACCAAATTCACATTATAAAAAATATAGTGGATTTCTTATTAGATGGACTTGAATGTTTAGAGGGTAAAAAATGAGACATGAAATCTTCTCTATANTTGGGATCAAATTTGGAATATGGCCAAACTTTAATTTGAAATATTATTAAATTAGATAAAATCTCGTGATTTAAATTTAAGATAAAATTTGAATTATGCTTCAAATTTTAATTTGAAATCAATTTAAGATTGAATCTACAATTCAATTTGAATTGAGAATCTCACCAAAATCTTCCCAACAAATAAGATTTCAATAATAAATCTAAATTGAATTAGGATTTGAATCCGATATTGGGCTCTATAAATAGAGCTTCATCTACACATCAATCTCATTCAATTCTTTTTCTCTTTTTCACAATCTTCTTCCTTATCTTAACATTTTCTTTTTCTTTTTTTCTTTTTTTTCTTCCATTTTCACTTTTTTTTTCCTTCTCTTTTTTCTCTTCTTTTCTTTATCTTTTTTTTTTCATTCTTCCTTTTTTTTTTCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTACTTTTCAGGTCTTTAGTGAATCCAGAATTGTGGAATACAATGTCAAAGAAAAACTTATTTCTCCTGGAAAACACGAGGTGCACGACCAAGCGCAATCACTATTGTTTTCTTTCTATATCGATTTATTAACGTTTATAGTTGACAAGAATTTCAATTTTGAACACAGATTATAGTCGATAATAAGCAACACTACAAGTTTATCGGAAGAAACATAGATTTGGAATCACTCATCAAGTTGTATGTTGTTGAAGGAAAAATAGTTCGTCATGAGGACTGGTATGTTAGCCAACGTTTTTCACATTTACATTTCTTTAAATAAACTTGTTGCCTTGAAGAGCATCTGCCTTTTGATTATTCTTTTGCTTGCAAGTTGCTGCCTTGTATTTCTTGCTGAAAATTTGATCATTGGTGCACCTTGGGCTGCATTGACAGAACTGATATATATTAGGATAAACCAAGTTCTCAAGGTACTTGGACCCTCCCTCCCAATCTTGAGATCACAAGACCTAATTCACTCCCCAAATTATTGCTTATCTTCTCCATTTCCCTCCCCCTCTATTTTTAACCAACAAGTATAACAAACTTCCTACCTAATTACTAATATACCCTTAATAATCTAATAACATCACAATATCATTCCTATCATGTATCCTTTGTAAAATCCCTGCCAATTACATAGGGAAAAAAAGTTTGCCACGTGACGAATTGTGGTTGGACAAGTGTAGTATGGGATACACCAAAGTATTCTTTTTTTTTCTTTAAAAAAAATTTTTGAGAACCTATAAAACCTTAAACCAAACGGACTCGAAAATTACGGAAACGATCTTCTATTGTTTGACTGTATACTATTGTTGTTATTTATCTAATAATTGATTATGGGACTTTTGGTCAGGTGGAATAAGAAACCACTTTTGAACAGAGAAACAGTCCAGTTACCAATGGTTGGTCGAATTATAGAAATGACTCGCAGATTTACAATGTTAGCAACTCATGCAATGATGGGATTTGGAAAAGATTAAACTCTACCAAACCCATCCAATACACTGAACCAGTATAGTTTGGAGTTACACCACTATGCATCTCCTCAATGGAAAAGAGAACGTTAGTCAATTATAACTTTACTATAAGTCTATATTTCTCAATTTCGTTTTGAAGATAATGAACCATAGTTGATCAATGCGTTGTAGCTTCTTGAGTATGGTCATTGAGAAATTATGGTCAGTTGGTTCCAGTAATGTTAAATGATGCTTTAGTTCTTCCCCATTTTCATTGTGAAGGATTCTATTTGGGGTGTAATCGCGTCGGTTCGACTTAGTTTAAATGTCAAATTTCCAAGAATTCTAGTTAGGGGTGTAGTCTATAAATGTATATCTTC

mRNA sequence

ATGAAGTTGTGGACGCAAAGGCTTCCGGCTTTGCTTCGCTGCCGAGAAAATTGGACCATTCTCGAAGAATCAAACTCGCTCCGGCTTCCTTCCTTACTGTTCCTAGAAATGCCGGGAGATGGTGGAATCACTGCGGATCCAACCATCGAAGCCTGCAGCAAGGAGGCAAGCGACTCCAAATTCGCGAAGCGTTTTGCCGACGATATCATGCCTCACGTCCTCAATCTGTATGGATCTTCTGCAACGCCTCGGGATTTTGAAATCTACGCTCCCGATGCTTCGTTCGAGGATCCATTAACGAGAGCTCACGGAGTGAAGGAAATCAAATCGGCATTTTATTCTTTGTCCAAGGTCTTTAGTGAATCCAGAATTGTGGAATACAATGTCAAAGAAAAACTTATTTCTCCTGGAAAACACGAGATTATAGTCGATAATAAGCAACACTACAAGTTTATCGGAAGAAACATAGATTTGGAATCACTCATCAAGTTGTATGTTGTTGAAGGAAAAATAGTTCGTCATGAGGACTGGTGGAATAAGAAACCACTTTTGAACAGAGAAACAGTCCAGTTACCAATGGTTGGTCGAATTATAGAAATGACTCGCAGATTTACAATGTTAGCAACTCATGCAATGATGGGATTTGGAAAAGATTAAACTCTACCAAACCCATCCAATACACTGAACCAGTATAGTTTGGAGTTACACCACTATGCATCTCCTCAATGGAAAAGAGAACGTTAGTCAATTATAACTTTACTATAAGTCTATATTTCTCAATTTCGTTTTGAAGATAATGAACCATAGTTGATCAATGCGTTGTAGCTTCTTGAGTATGGTCATTGAGAAATTATGGTCAGTTGGTTCCAGTAATGTTAAATGATGCTTTAGTTCTTCCCCATTTTCATTGTGAAGGATTCTATTTGGGGTGTAATCGCGTCGGTTCGACTTAGTTTAAATGTCAAATTTCCAAGAATTCTAGTTAGGGGTGTAGTCTATAAATGTATATCTTC

Coding sequence (CDS)

ATGAAGTTGTGGACGCAAAGGCTTCCGGCTTTGCTTCGCTGCCGAGAAAATTGGACCATTCTCGAAGAATCAAACTCGCTCCGGCTTCCTTCCTTACTGTTCCTAGAAATGCCGGGAGATGGTGGAATCACTGCGGATCCAACCATCGAAGCCTGCAGCAAGGAGGCAAGCGACTCCAAATTCGCGAAGCGTTTTGCCGACGATATCATGCCTCACGTCCTCAATCTGTATGGATCTTCTGCAACGCCTCGGGATTTTGAAATCTACGCTCCCGATGCTTCGTTCGAGGATCCATTAACGAGAGCTCACGGAGTGAAGGAAATCAAATCGGCATTTTATTCTTTGTCCAAGGTCTTTAGTGAATCCAGAATTGTGGAATACAATGTCAAAGAAAAACTTATTTCTCCTGGAAAACACGAGATTATAGTCGATAATAAGCAACACTACAAGTTTATCGGAAGAAACATAGATTTGGAATCACTCATCAAGTTGTATGTTGTTGAAGGAAAAATAGTTCGTCATGAGGACTGGTGGAATAAGAAACCACTTTTGAACAGAGAAACAGTCCAGTTACCAATGGTTGGTCGAATTATAGAAATGACTCGCAGATTTACAATGTTAGCAACTCATGCAATGATGGGATTTGGAAAAGATTAA

Protein sequence

MKLWTQRLPALLRCRENWTILEESNSLRLPSLLFLEMPGDGGITADPTIEACSKEASDSKFAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD

Homology

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BLAST of ClCG05G021890 vs. TrEMBL
Match: A0A0A0KUR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613550 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.0e-102
Identity = 188/218 (86.24%), Postives = 196/218 (89.91%), Query Frame = 1


Query: 1   MKLWTQRLPALLRCRENWTILEESNSLRLPSLLFLEMPGDGGITADPTIEACSKEASDSK 60
           M +W  RL  LLR +ENW ILEE  SLRL SLLFL+MPG G ITADPTIEAC+KEA DSK
Sbjct: 15  MGIWRPRLQVLLRGKENWRILEEQYSLRLRSLLFLKMPGGGEITADPTIEACTKEACDSK 74

Query: 61  FAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFS 120
             KR ADDIMPH+LNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFS
Sbjct: 75  TTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFS 134

Query: 121 ESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLYVVEGKIVRHEDWWNK 180
           ESRIVEYN  E+LISPGKHEI VDNKQHYKF+GRNIDLESLIKLYVVEGKIVRHEDWWNK
Sbjct: 135 ESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYVVEGKIVRHEDWWNK 194

Query: 181 KPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD 219
           KPLLNRETVQLPMVGR +EMTRR  MLATHAMMGFGKD
Sbjct: 195 KPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 232

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BLAST of ClCG05G021890 vs. TrEMBL
Match: A9PJT0_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.2e-67
Identity = 125/173 (72.25%), Postives = 148/173 (85.55%), Query Frame = 1


Query: 46  DPTIEACSKEASDSKFAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHGV 105
           D T E CSKE+ + K  K  +DDI+PH+LNLYGS ATPRDFEIYA +ASFEDPL  AHGV
Sbjct: 12  DETRECCSKESCEYKPGKPVSDDIIPHILNLYGSCATPRDFEIYASNASFEDPLMCAHGV 71

Query: 106 KEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLY 165
           K+IKSAFYSLSK+FSESRIVEY+VKEK +SP K EI++DNKQ+YKF+GR+ID+ SLIKLY
Sbjct: 72  KQIKSAFYSLSKIFSESRIVEYSVKEKAMSPEKQEILIDNKQNYKFLGRSIDMISLIKLY 131

Query: 166 VVEGKIVRHEDWWNKKPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD 219
           V +GK+VRHEDWW+KKPL NRET++ PM GR +E  RR +MLATHAMMGFGKD
Sbjct: 132 VEDGKVVRHEDWWDKKPLRNRETIKFPMAGRFMETLRRGSMLATHAMMGFGKD 184

[Close]

BLAST of ClCG05G021890 vs. TrEMBL
Match: B9HVK6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24810g PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.2e-67
Identity = 125/173 (72.25%), Postives = 148/173 (85.55%), Query Frame = 1


Query: 46  DPTIEACSKEASDSKFAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHGV 105
           D T E CSKE+ + K  K  +DDI+PH+LNLYGS ATPRDFEIYA +ASFEDPL  AHGV
Sbjct: 12  DETRECCSKESCEYKPGKPVSDDIIPHILNLYGSCATPRDFEIYASNASFEDPLMCAHGV 71

Query: 106 KEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLY 165
           K+IKSAFYSLSK+FSESRIVEY+VKEK +SP K EI++DNKQ+YKF+GR+ID+ SLIKLY
Sbjct: 72  KQIKSAFYSLSKIFSESRIVEYSVKEKAMSPEKQEILIDNKQNYKFLGRSIDMISLIKLY 131

Query: 166 VVEGKIVRHEDWWNKKPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD 219
           V +GK+VRHEDWW+KKPL NRET++ PM GR +E  RR +MLATHAMMGFGKD
Sbjct: 132 VEDGKVVRHEDWWDKKPLRNRETIKFPMAGRFMETLRRGSMLATHAMMGFGKD 184

[Close]

BLAST of ClCG05G021890 vs. TrEMBL
Match: W9QL08_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012604 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 9.8e-66
Identity = 124/167 (74.25%), Postives = 143/167 (85.63%), Query Frame = 1


Query: 52  CSKEASDSKFAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSA 111
           CS    +    KR ADDI+P +LNLY SSATPRDFEIYAPDASFEDPL  A GVK+IKSA
Sbjct: 69  CSNGVHEFVSKKRLADDIIPQILNLYASSATPRDFEIYAPDASFEDPLMCARGVKQIKSA 128

Query: 112 FYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLYVVEGKI 171
           FYSLSKVF ESRIVEY+V+EKL SPGK EI++DNKQ+YKF GRNID+ SLIKLYV +GK+
Sbjct: 129 FYSLSKVFGESRIVEYSVEEKLTSPGKGEILIDNKQYYKFWGRNIDVISLIKLYVADGKV 188

Query: 172 VRHEDWWNKKPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD 219
           VRHEDWW+KKPLLNRET +LP++GR IE+ RR +MLATHAMMGFG+D
Sbjct: 189 VRHEDWWDKKPLLNRETAKLPLIGRFIEIARRGSMLATHAMMGFGED 235

[Close]

BLAST of ClCG05G021890 vs. TrEMBL
Match: A0A061FQE5_THECC (Nuclear transport factor 2 family protein OS=Theobroma cacao GN=TCM_044326 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-65
Identity = 128/171 (74.85%), Postives = 146/171 (85.38%), Query Frame = 1


Query: 50  EACSKEA--SDSKFAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKE 109
           E   KEA  SDS   KR +D IMPH+LNLYGS AT  DFEIY  DASFEDPL  AHGVK+
Sbjct: 51  ECVGKEACDSDSMKMKRLSDHIMPHLLNLYGSCATSCDFEIYHVDASFEDPLMCAHGVKQ 110

Query: 110 IKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLYVV 169
           IKSAFYSLSKVFSESRIVEY+V EK+IS GK EI++DNKQHYKF+GRNID+ SLI+LYV 
Sbjct: 111 IKSAFYSLSKVFSESRIVEYSVTEKVISDGKQEILIDNKQHYKFLGRNIDMISLIRLYVE 170

Query: 170 EGKIVRHEDWWNKKPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD 219
           +GK+VRHEDWW+KKPL NRETV LP+VGRI+E+TRR +MLATHA+MGFGKD
Sbjct: 171 DGKVVRHEDWWDKKPLRNRETVNLPLVGRIMELTRRGSMLATHALMGFGKD 221

[Close]

BLAST of ClCG05G021890 vs. TAIR10
Match: AT5G04830.1 (AT5G04830.1 Nuclear transport factor 2 (NTF2) family protein)

HSP 1 Score: 252.7 bits (644), Expect = 2.1e-67
Identity = 122/173 (70.52%), Postives = 141/173 (81.50%), Query Frame = 1


Query: 46  DPTIEACSKEASDSKFAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHGV 105
           DP  E   K A + K  KRFAD IMPH+LNLYGSSA   DF++YAP+ASFEDPLT A GV
Sbjct: 2   DPARECEGKGACELKSNKRFADKIMPHLLNLYGSSAKANDFDMYAPNASFEDPLTHAQGV 61

Query: 106 KEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLY 165
           K+IKSAFYSL KVF ES+IVEY+++E   SPGK EI++DNKQHYK +GRNID+ SLIKLY
Sbjct: 62  KQIKSAFYSLPKVFGESKIVEYHIQESETSPGKKEILIDNKQHYKIMGRNIDMISLIKLY 121

Query: 166 VVEGKIVRHEDWWNKKPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD 219
           V +GKIVRHEDWW+KKPL NR+TV  P+VGR++EM RR  MLATHAMMGFGKD
Sbjct: 122 VEDGKIVRHEDWWDKKPLRNRDTVSFPLVGRVMEMGRRGLMLATHAMMGFGKD 174

[Close]

BLAST of ClCG05G021890 vs. NCBI nr
Match: gi|659091813|ref|XP_008446746.1| (PREDICTED: uncharacterized protein LOC103489375 [Cucumis melo])

HSP 1 Score: 382.9 bits (982), Expect = 3.8e-103
Identity = 189/218 (86.70%), Postives = 200/218 (91.74%), Query Frame = 1


Query: 1   MKLWTQRLPALLRCRENWTILEESNSLRLPSLLFLEMPGDGGITADPTIEACSKEASDSK 60
           M +W  R   LLR RENWTILE  +SLRL SLLFL+MPGDG ITADPTIEAC+KEA DSK
Sbjct: 15  MGIWRMRPQVLLRRRENWTILEGQHSLRLRSLLFLKMPGDGEITADPTIEACTKEACDSK 74

Query: 61  FAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFS 120
             KR ADDIMPH+LNLYGSSATPRDFEIYAPDASF+DPLTRA+GVKEIKSAFYSLSKVFS
Sbjct: 75  TTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFKDPLTRAYGVKEIKSAFYSLSKVFS 134

Query: 121 ESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLYVVEGKIVRHEDWWNK 180
           ESRIVEY+ KE+LISPGKHEIIVDNKQHYKF+GRNIDLESLIKLYVVEGKIVRHEDWWNK
Sbjct: 135 ESRIVEYDFKERLISPGKHEIIVDNKQHYKFLGRNIDLESLIKLYVVEGKIVRHEDWWNK 194

Query: 181 KPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD 219
           KPLLNRETVQLPMVGR +EMTRR TMLATHAMMGFGKD
Sbjct: 195 KPLLNRETVQLPMVGRFLEMTRRGTMLATHAMMGFGKD 232

[Close]

BLAST of ClCG05G021890 vs. NCBI nr
Match: gi|449434514|ref|XP_004135041.1| (PREDICTED: uncharacterized protein LOC101206496 isoform X2 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 1.4e-102
Identity = 188/218 (86.24%), Postives = 196/218 (89.91%), Query Frame = 1


Query: 1   MKLWTQRLPALLRCRENWTILEESNSLRLPSLLFLEMPGDGGITADPTIEACSKEASDSK 60
           M +W  RL  LLR +ENW ILEE  SLRL SLLFL+MPG G ITADPTIEAC+KEA DSK
Sbjct: 15  MGIWRPRLQVLLRGKENWRILEEQYSLRLRSLLFLKMPGGGEITADPTIEACTKEACDSK 74

Query: 61  FAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFS 120
             KR ADDIMPH+LNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFS
Sbjct: 75  TTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFS 134

Query: 121 ESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLYVVEGKIVRHEDWWNK 180
           ESRIVEYN  E+LISPGKHEI VDNKQHYKF+GRNIDLESLIKLYVVEGKIVRHEDWWNK
Sbjct: 135 ESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYVVEGKIVRHEDWWNK 194

Query: 181 KPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD 219
           KPLLNRETVQLPMVGR +EMTRR  MLATHAMMGFGKD
Sbjct: 195 KPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 232

[Close]

BLAST of ClCG05G021890 vs. NCBI nr
Match: gi|778706292|ref|XP_011655829.1| (PREDICTED: uncharacterized protein LOC101206496 isoform X1 [Cucumis sativus])

HSP 1 Score: 373.6 bits (958), Expect = 2.3e-100
Identity = 188/226 (83.19%), Postives = 196/226 (86.73%), Query Frame = 1


Query: 1   MKLWTQRLPALLRCRENWTILEESNSLRLPSLLFLEMPGDGGITADPTIEACSKEASDSK 60
           M +W  RL  LLR +ENW ILEE  SLRL SLLFL+MPG G ITADPTIEAC+KEA DSK
Sbjct: 15  MGIWRPRLQVLLRGKENWRILEEQYSLRLRSLLFLKMPGGGEITADPTIEACTKEACDSK 74

Query: 61  FAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHG--------VKEIKSAF 120
             KR ADDIMPH+LNLYGSSATPRDFEIYAPDASFEDPLTRAHG        VKEIKSAF
Sbjct: 75  TTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGCSVFRFCSVKEIKSAF 134

Query: 121 YSLSKVFSESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLYVVEGKIV 180
           YSLSKVFSESRIVEYN  E+LISPGKHEI VDNKQHYKF+GRNIDLESLIKLYVVEGKIV
Sbjct: 135 YSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYVVEGKIV 194

Query: 181 RHEDWWNKKPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD 219
           RHEDWWNKKPLLNRETVQLPMVGR +EMTRR  MLATHAMMGFGKD
Sbjct: 195 RHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 240

[Close]

BLAST of ClCG05G021890 vs. NCBI nr
Match: gi|1009119663|ref|XP_015876502.1| (PREDICTED: uncharacterized protein LOC107413142 [Ziziphus jujuba])

HSP 1 Score: 266.2 bits (679), Expect = 5.2e-68
Identity = 129/174 (74.14%), Postives = 148/174 (85.06%), Query Frame = 1


Query: 45  ADPTIEACSKEASDSKFAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHG 104
           AD T EACSK + D    K  +D I+PH+LNLY S ATPRDFEIY P+ASFEDPL  AHG
Sbjct: 67  ADQTREACSKGSCDVFPTKGLSDSIIPHILNLYASCATPRDFEIYDPNASFEDPLMCAHG 126

Query: 105 VKEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKL 164
           VK+IKSAFYSLSKVFSES+IVEY+VKE   SPGK E+++DNKQHYKF+G+NID+ SLIKL
Sbjct: 127 VKQIKSAFYSLSKVFSESKIVEYSVKENWTSPGKGEMLIDNKQHYKFLGKNIDMISLIKL 186

Query: 165 YVVEGKIVRHEDWWNKKPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD 219
           YV EGK+VRHEDWW+KKPL NRETV LP+ GRI+EMTRR +MLATHAMMGFGKD
Sbjct: 187 YVEEGKVVRHEDWWDKKPLWNRETVNLPLAGRIMEMTRRGSMLATHAMMGFGKD 240

[Close]

BLAST of ClCG05G021890 vs. NCBI nr
Match: gi|224110130|ref|XP_002315423.1| (hypothetical protein POPTR_0010s24810g [Populus trichocarpa])

HSP 1 Score: 262.3 bits (669), Expect = 7.5e-67
Identity = 125/173 (72.25%), Postives = 148/173 (85.55%), Query Frame = 1


Query: 46  DPTIEACSKEASDSKFAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHGV 105
           D T E CSKE+ + K  K  +DDI+PH+LNLYGS ATPRDFEIYA +ASFEDPL  AHGV
Sbjct: 12  DETRECCSKESCEYKPGKPVSDDIIPHILNLYGSCATPRDFEIYASNASFEDPLMCAHGV 71

Query: 106 KEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLY 165
           K+IKSAFYSLSK+FSESRIVEY+VKEK +SP K EI++DNKQ+YKF+GR+ID+ SLIKLY
Sbjct: 72  KQIKSAFYSLSKIFSESRIVEYSVKEKAMSPEKQEILIDNKQNYKFLGRSIDMISLIKLY 131

Query: 166 VVEGKIVRHEDWWNKKPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD 219
           V +GK+VRHEDWW+KKPL NRET++ PM GR +E  RR +MLATHAMMGFGKD
Sbjct: 132 VEDGKVVRHEDWWDKKPLRNRETIKFPMAGRFMETLRRGSMLATHAMMGFGKD 184

The following BLAST results are available for this feature:

BLAST of ClCG05G021890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUR1_CUCSA	1.0e-102	86.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613550 PE=4 SV=1	[more]
A9PJT0_9ROSI	5.2e-67	72.25	Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2...	[more]
B9HVK6_POPTR	5.2e-67	72.25	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24810g PE=4 SV=1	[more]
W9QL08_9ROSA	9.8e-66	74.25	Uncharacterized protein OS=Morus notabilis GN=L484_012604 PE=4 SV=1	[more]
A0A061FQE5_THECC	1.7e-65	74.85	Nuclear transport factor 2 family protein OS=Theobroma cacao GN=TCM_044326 PE=4 ...	[more]

BLAST of ClCG05G021890 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G04830.1	2.1e-67	70.52	Nuclear transport factor 2 (NTF2) family protein	[more]

BLAST of ClCG05G021890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091813\|ref\|XP_008446746.1\|	3.8e-103	86.70	PREDICTED: uncharacterized protein LOC103489375 [Cucumis melo]	[more]
gi\|449434514\|ref\|XP_004135041.1\|	1.4e-102	86.24	PREDICTED: uncharacterized protein LOC101206496 isoform X2 [Cucumis sativus]	[more]
gi\|778706292\|ref\|XP_011655829.1\|	2.3e-100	83.19	PREDICTED: uncharacterized protein LOC101206496 isoform X1 [Cucumis sativus]	[more]
gi\|1009119663\|ref\|XP_015876502.1\|	5.2e-68	74.14	PREDICTED: uncharacterized protein LOC107413142 [Ziziphus jujuba]	[more]
gi\|224110130\|ref\|XP_002315423.1\|	7.5e-67	72.25	hypothetical protein POPTR_0010s24810g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0000919	cell plate assembly
biological_process	GO:1901703	protein localization involved in auxin polar transport
biological_process	GO:0048354	mucilage biosynthetic process involved in seed coat development
biological_process	GO:0042814	monopolar cell growth
biological_process	GO:0010102	lateral root morphogenesis
biological_process	GO:0006887	exocytosis
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0000145	exocyst
cellular_component	GO:0009504	cell plate
cellular_component	GO:0005829	cytosol
cellular_component	GO:0070062	extracellular exosome
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0090404	pollen tube tip
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G021890.1	ClCG05G021890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34213	FAMILY NOT NAMED	coord: 46..218 score: 3.3
None	No IPR available	PANTHER	PTHR34213:SF2	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN	coord: 46..218 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G021890	Csa5G613550	Cucumber (Chinese Long) v2	cuwcgB394
ClCG05G021890	MELO3C012339	Melon (DHL92) v3.5.1	mewcgB062
ClCG05G021890	Cla020481	Watermelon (97103) v1	wcgwmB285
ClCG05G021890	Cla97C05G103590	Watermelon (97103) v2	wcgwmbB229
ClCG05G021890	CSPI05G26210	Wild cucumber (PI 183967)	cpiwcgB412
ClCG05G021890	Cucsa.282710	Cucumber (Gy14) v1	cgywcgB498
ClCG05G021890	CmaCh04G014430	Cucurbita maxima (Rimu)	cmawcgB655
ClCG05G021890	CmoCh04G015140	Cucurbita moschata (Rifu)	cmowcgB654
ClCG05G021890	Lsi04G001580	Bottle gourd (USVL1VR-Ls)	lsiwcgB283
ClCG05G021890	Cp4.1LG01g14170	Cucurbita pepo (Zucchini)	cpewcgB388
ClCG05G021890	CsGy5G025680	Cucumber (Gy14) v2	cgybwcgB359
ClCG05G021890	MELO3C012339.2	Melon (DHL92) v3.6.1	medwcgB061
ClCG05G021890	Carg01897	Silver-seed gourd	carwcgB0816
ClCG05G021890	CsaV3_5G035250	Cucumber (Chinese Long) v3	cucwcgB415

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G021890	Wax gourd	wcgwgoB469
ClCG05G021890	Watermelon (Charleston Gray)	wcgwcgB167
ClCG05G021890	Cucurbita maxima (Rimu)	cmawcgB364
ClCG05G021890	Cucurbita maxima (Rimu)	cmawcgB664
ClCG05G021890	Cucurbita moschata (Rifu)	cmowcgB358
ClCG05G021890	Cucurbita moschata (Rifu)	cmowcgB665
ClCG05G021890	Watermelon (97103) v1	wcgwmB274
ClCG05G021890	Cucurbita pepo (Zucchini)	cpewcgB045
ClCG05G021890	Cucurbita pepo (Zucchini)	cpewcgB398
ClCG05G021890	Bottle gourd (USVL1VR-Ls)	lsiwcgB435
ClCG05G021890	Silver-seed gourd	carwcgB1023