CSPI05G26210 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G26210
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Nuclear transport factor 2 (NTF2) family protein
Location	Chr5 : 25156570 .. 25159538 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGTTTAAAATTTGAAAGGCCGAAATAGATGCACGTTGCGCGCCACCGAAGTGGACCTCAAAGTGAATTTATGGGAATATGGAGGCCGAGGCTTCAGGTTCTGCTACGCCGGAAAGAAAATTGGAGGATTCTCGAAGAACAATACTCGCTCCGGTAATCATAAACTTCTTTCTTCTTCATTTCTCTCGACTGCATACTTATCTGGAACAATCTGGTAATCAATTCCTTATACTTCTAGTCTTCGTTCATTACTGTTCCTAAAAATGCCGGGAGGTGGTGAAATCACTGCTGATCCAACTATCGAAGCCTGCACCAAAGAGGCTTGCGATTCCAAGACCACGAAGCGTTTAGCCGATGATATCATGCCTCACATCCTCAATCTGTGAGTTCCTTTTTTTTTTTTCTTCTTGATCTTTCACTCGTTAACTCTACTTTTTGTTTTTTGAACGATGAGATTATCTTTCTAGGTATGGATCTTCTGCAACGCCTCGTGATTTTGAAATCTACGCTCCCGATGCTTCGTTCGAGGATCCACTTACGAGAGCTCACGGGTATGTACTGTTGGATTGGATTTTAGAAGATGAATTTGTTGATTTACGATTTATTTGTTTGAAAAGGCAATTGTGAGATCATTAATGACGACGAGGAGCTGAGTACAATTTATTGTGTATTGATCCGTGAATTGTTTATTTCAAAGTTGCTCTGTTTTTCGGTTCTGCAGTGTGAAGGAAATCAAATCGGCATTTTATTCTCTGTCCAAGGTTCTTATCACTTTCCACTCTTTGGAATTGGTTCCTTTAATTTTGACTATAACATAGCATGTTTACGATTGAAAGTTCACTCAACTTTGTTTCTGTTCTGTATGAGATAGCTTTTTATTTCCTTTGAAATTGCTGATATGAATATATCAAATCAGATAAGGTAATTTGTCTCGAATTAGATGATGCTGATTGTTATAACCCAAACTTAAGCTAATGGATTATGGTAAATTCAAATTTAATTCACCAATTGAAGGTTCTCTCTTTGAGTTTGTTGTTTTCAAGGCATGCCTTGAAGCTGCTGCTTGGAGTTCAAAGTGGCACCATCTTGAAGGAGCATGTTGAGGATCCACATTAGAACTCATTTCATCTAATAATAGTACCAATAAAATAGTTGTAGAAATTGGATCACCAAATGATAAAAATTGAACCTCAATCTTGTACAATTATTACAATTTCTACAATTATGTAAGTTTGATGGTTCAATTTTTGCACTTGCATAAGTTCGAAGACTCAAATTTTACTATTGAATGTTAGAGGTAGAATTGCAACGGTCTACCATACTTTAGGGATGGTTTCTACAAGTTTCCCTATAATTGCAACTACTTAGGATTTTAGAGACAACGTTGTCTGGACTGGAAGGAACACATTCACACATGTATTGGACACCAACTTCACATTATAAAGAAGGCCTTGAATTTCACCTTTTATTATATATGAATGAGCTTACACCCCCACTCCTATCAATATGGTAGGTTTTCAGTAAAGGGATTTGAATGTTTAGGGATGAATAGAAAATGAGATGAAATCTTCTCTAAATAATCTTCTACTTCTTGTTGCAGTTTTTGAGGATTCTTTTTTGGTATTTCTCAGGTCTTCAGTGAATCAAGAATTGTGGAATACAATTTCAACGAAAGACTTATTTCCCCTGGAAAACACGAGGTGCATGACCAAACAGTCACTATTATTGTTTTCTTTCTATTATCAATTTATTAACGCTTATAGTTGACGAGAGAGTTTCAATTTTGAACACAGATTACAGTTGATAATAAGCAACACTACAAGTTTTTGGGAAGAAACATAGATTTGGAATCCCTCATCAAGTTGTATGTTGTTGAAGGAAAAATAGTTCGTCATGAGGACTGGTATGTTTGCCAACATTTTTCACCTTTTCATTTCTTTGAATAGACTTGTTGCCTGCATCTGCCTCTTAATCATTCTCTTGCTTGCAAGTTGTGCTCAAATCCATGAAAATTTGAACTTCAGTGGTGCATTCTAGATTGCATTCTTCTTTGTCCAACTCATCCAATTGCAACAGGAAAAAAATTAAACCGAGGTTGGAAAATTGGATAGGATACACAAAGATGAACTTAACCTTGAATGCACCATAGTTCGTTTTATTTTAGAGAATCTACAGAGCTTTAAACATAATAGCTCCAAAATTACTGTTTGATTGTATACTATTTTTTGTTAGGGTAATTGCAACAGGTAAGGTTATTTAGTGTATAACATCTTTAAAGAATTGGAAATATCATAAAATCTATGAAACAGTTGATCACTATGGACTAATATTAGTGATGGACTTTCATTGGCGATAGGGTCTTGTCTATTTGTAATTTTTTTTTCAATGTCTCGTAGATATACTAATACTTTGGGTCTGATTGCTATGTTTGCAACAGCCACTTGTTAGCTCATAATTGATTTTGGGACTTTTGGTTAGGTGGAACAAGAAACCACTTTTGAATAGAGAAACAGTCCAATTACCAATGGTTGGTCGGTTTTTGGAAATGACTCGGAGATGTGCAATGTTAGCAACTCATGCAATGATGGGATTTGGAAAAGATTAAACTTTAACAAACCCGTCCAATACACTGATTCCATATAGTTTAGAATTACACTATGTATCTCCTCATAGGAAATGAGAACATGAGTTAGTCTATTATAAGTATATATTTTCTCAATTTCTTTTCTAAGATAATTTACCAAAGTTGATCACTGCCTCGTAGCTTCTCGAGTATGGTCATCAAGATGATATGATCGATAGGTTCCTATGGTTAGTTGACTCCTGTAATCTGTTAAAGAGTAGCTTTGATTCTTCTTCATTGTCTGTGAATGATTCTAGTTGACGTGTAATTGCGTTGGCTCGTCTCGGTTTAAGTGTCGAACAACTAGAACTTTAGTTAAGGGAGTAGTCTATATATATATATATA

mRNA sequence

ATGCACGTTGCGCGCCACCGAAGTGGACCTCAAAGTGAATTTATGGGAATATGGAGGCCGAGGCTTCAGGTTCTGCTACGCCGGAAAGAAAATTGGAGGATTCTCGAAGAACAATACTCGCTCCGTCTTCGTTCATTACTGTTCCTAAAAATGCCGGGAGGTGGTGAAATCACTGCTGATCCAACTATCGAAGCCTGCACCAAAGAGGCTTGCGATTCCAAGACCACGAAGCGTTTAGCCGATGATATCATGCCTCACATCCTCAATCTGTATGGATCTTCTGCAACGCCTCGTGATTTTGAAATCTACGCTCCCGATGCTTCGTTCGAGGATCCACTTACGAGAGCTCACGGTGTGAAGGAAATCAAATCGGCATTTTATTCTCTGTCCAAGGTCTTCAGTGAATCAAGAATTGTGGAATACAATTTCAACGAAAGACTTATTTCCCCTGGAAAACACGAGATTACAGTTGATAATAAGCAACACTACAAGTTTTTGGGAAGAAACATAGATTTGGAATCCCTCATCAAGTTGTATGTTGTTGAAGGAAAAATAGTTCGTCATGAGGACTGGTGGAACAAGAAACCACTTTTGAATAGAGAAACAGTCCAATTACCAATGGTTGGTCGGTTTTTGGAAATGACTCGGAGATGTGCAATGTTAGCAACTCATGCAATGATGGGATTTGGAAAAGATTAA

Coding sequence (CDS)

ATGCACGTTGCGCGCCACCGAAGTGGACCTCAAAGTGAATTTATGGGAATATGGAGGCCGAGGCTTCAGGTTCTGCTACGCCGGAAAGAAAATTGGAGGATTCTCGAAGAACAATACTCGCTCCGTCTTCGTTCATTACTGTTCCTAAAAATGCCGGGAGGTGGTGAAATCACTGCTGATCCAACTATCGAAGCCTGCACCAAAGAGGCTTGCGATTCCAAGACCACGAAGCGTTTAGCCGATGATATCATGCCTCACATCCTCAATCTGTATGGATCTTCTGCAACGCCTCGTGATTTTGAAATCTACGCTCCCGATGCTTCGTTCGAGGATCCACTTACGAGAGCTCACGGTGTGAAGGAAATCAAATCGGCATTTTATTCTCTGTCCAAGGTCTTCAGTGAATCAAGAATTGTGGAATACAATTTCAACGAAAGACTTATTTCCCCTGGAAAACACGAGATTACAGTTGATAATAAGCAACACTACAAGTTTTTGGGAAGAAACATAGATTTGGAATCCCTCATCAAGTTGTATGTTGTTGAAGGAAAAATAGTTCGTCATGAGGACTGGTGGAACAAGAAACCACTTTTGAATAGAGAAACAGTCCAATTACCAATGGTTGGTCGGTTTTTGGAAATGACTCGGAGATGTGCAATGTTAGCAACTCATGCAATGATGGGATTTGGAAAAGATTAA

Homology

[Close]

BLAST of CSPI05G26210 vs. TrEMBL
Match: A0A0A0KUR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613550 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 3.2e-131
Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 1


Query: 1   MHVARHRSGPQSEFMGIWRPRLQVLLRRKENWRILEEQYSLRLRSLLFLKMPGGGEITAD 60
           MHVARHRSGPQSEFMGIWRPRLQVLLR KENWRILEEQYSLRLRSLLFLKMPGGGEITAD
Sbjct: 1   MHVARHRSGPQSEFMGIWRPRLQVLLRGKENWRILEEQYSLRLRSLLFLKMPGGGEITAD 60

Query: 61  PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVK 120
           PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVK
Sbjct: 61  PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVK 120

Query: 121 EIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYV 180
           EIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYV
Sbjct: 121 EIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYV 180

Query: 181 VEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 233
           VEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD
Sbjct: 181 VEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 232

[Close]

BLAST of CSPI05G26210 vs. TrEMBL
Match: A9PJT0_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.0e-68
Identity = 125/173 (72.25%), Postives = 148/173 (85.55%), Query Frame = 1


Query: 60  DPTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGV 119
           D T E C+KE+C+ K  K ++DDI+PHILNLYGS ATPRDFEIYA +ASFEDPL  AHGV
Sbjct: 12  DETRECCSKESCEYKPGKPVSDDIIPHILNLYGSCATPRDFEIYASNASFEDPLMCAHGV 71

Query: 120 KEIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLY 179
           K+IKSAFYSLSK+FSESRIVEY+  E+ +SP K EI +DNKQ+YKFLGR+ID+ SLIKLY
Sbjct: 72  KQIKSAFYSLSKIFSESRIVEYSVKEKAMSPEKQEILIDNKQNYKFLGRSIDMISLIKLY 131

Query: 180 VVEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 233
           V +GK+VRHEDWW+KKPL NRET++ PM GRF+E  RR +MLATHAMMGFGKD
Sbjct: 132 VEDGKVVRHEDWWDKKPLRNRETIKFPMAGRFMETLRRGSMLATHAMMGFGKD 184

[Close]

BLAST of CSPI05G26210 vs. TrEMBL
Match: B9HVK6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24810g PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.0e-68
Identity = 125/173 (72.25%), Postives = 148/173 (85.55%), Query Frame = 1


Query: 60  DPTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGV 119
           D T E C+KE+C+ K  K ++DDI+PHILNLYGS ATPRDFEIYA +ASFEDPL  AHGV
Sbjct: 12  DETRECCSKESCEYKPGKPVSDDIIPHILNLYGSCATPRDFEIYASNASFEDPLMCAHGV 71

Query: 120 KEIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLY 179
           K+IKSAFYSLSK+FSESRIVEY+  E+ +SP K EI +DNKQ+YKFLGR+ID+ SLIKLY
Sbjct: 72  KQIKSAFYSLSKIFSESRIVEYSVKEKAMSPEKQEILIDNKQNYKFLGRSIDMISLIKLY 131

Query: 180 VVEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 233
           V +GK+VRHEDWW+KKPL NRET++ PM GRF+E  RR +MLATHAMMGFGKD
Sbjct: 132 VEDGKVVRHEDWWDKKPLRNRETIKFPMAGRFMETLRRGSMLATHAMMGFGKD 184

[Close]

BLAST of CSPI05G26210 vs. TrEMBL
Match: A0A0B0PI34_GOSAR (Polyprotein OS=Gossypium arboreum GN=F383_08364 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.6e-68
Identity = 127/167 (76.05%), Postives = 146/167 (87.43%), Query Frame = 1


Query: 68  KEACDSKTT--KRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSA 127
           KEAC+S  T  KR++DDIMPH+LNLYGS ATPRDFEIYA +ASFEDPL  AHGVK+IKS+
Sbjct: 41  KEACESNPTNVKRVSDDIMPHLLNLYGSRATPRDFEIYAANASFEDPLMCAHGVKQIKSS 100

Query: 128 FYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYVVEGKI 187
           FYSLSKVFSESRIVEY+ NE+ IS GKHEI VDNKQ YKFLGRNID+ SLI+LYV +GK+
Sbjct: 101 FYSLSKVFSESRIVEYSINEKEISAGKHEILVDNKQQYKFLGRNIDMISLIRLYVKDGKV 160

Query: 188 VRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 233
           VRHEDWW+KKPL NRETV+LP VGR +E+TRR +M  THA+MGFGKD
Sbjct: 161 VRHEDWWDKKPLRNRETVKLPCVGRMIELTRRGSMFVTHALMGFGKD 207

[Close]

BLAST of CSPI05G26210 vs. TrEMBL
Match: V4TZH1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016517mg PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.3e-67
Identity = 125/173 (72.25%), Postives = 143/173 (82.66%), Query Frame = 1


Query: 60  DPTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGV 119
           D   E C KEAC+  ++KR++DDIMPHILNLYGS AT  DFEIYAP ASFEDPL  AHGV
Sbjct: 59  DQIRERCGKEACELTSSKRISDDIMPHILNLYGSCATSHDFEIYAPHASFEDPLMCAHGV 118

Query: 120 KEIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLY 179
           K+IKSAFY++SKVFSES I EY+  E +IS  K EIT+D KQHYKF+GRNID+ SLIKLY
Sbjct: 119 KQIKSAFYAISKVFSESSISEYSVEENIISAQKREITIDTKQHYKFMGRNIDMISLIKLY 178

Query: 180 VVEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 233
             +GK+VRHED W+KKPL NRETV LP+VGR  EMTRRC+MLATHAMMGFGKD
Sbjct: 179 TEDGKVVRHEDMWDKKPLRNRETVNLPLVGRIQEMTRRCSMLATHAMMGFGKD 231

[Close]

BLAST of CSPI05G26210 vs. TAIR10
Match: AT5G04830.1 (AT5G04830.1 Nuclear transport factor 2 (NTF2) family protein)

HSP 1 Score: 254.6 bits (649), Expect = 5.9e-68
Identity = 122/173 (70.52%), Postives = 139/173 (80.35%), Query Frame = 1


Query: 60  DPTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGV 119
           DP  E   K AC+ K+ KR AD IMPH+LNLYGSSA   DF++YAP+ASFEDPLT A GV
Sbjct: 2   DPARECEGKGACELKSNKRFADKIMPHLLNLYGSSAKANDFDMYAPNASFEDPLTHAQGV 61

Query: 120 KEIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLY 179
           K+IKSAFYSL KVF ES+IVEY+  E   SPGK EI +DNKQHYK +GRNID+ SLIKLY
Sbjct: 62  KQIKSAFYSLPKVFGESKIVEYHIQESETSPGKKEILIDNKQHYKIMGRNIDMISLIKLY 121

Query: 180 VVEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 233
           V +GKIVRHEDWW+KKPL NR+TV  P+VGR +EM RR  MLATHAMMGFGKD
Sbjct: 122 VEDGKIVRHEDWWDKKPLRNRDTVSFPLVGRVMEMGRRGLMLATHAMMGFGKD 174

[Close]

BLAST of CSPI05G26210 vs. NCBI nr
Match: gi|449434514|ref|XP_004135041.1| (PREDICTED: uncharacterized protein LOC101206496 isoform X2 [Cucumis sativus])

HSP 1 Score: 475.7 bits (1223), Expect = 4.6e-131
Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 1


Query: 1   MHVARHRSGPQSEFMGIWRPRLQVLLRRKENWRILEEQYSLRLRSLLFLKMPGGGEITAD 60
           MHVARHRSGPQSEFMGIWRPRLQVLLR KENWRILEEQYSLRLRSLLFLKMPGGGEITAD
Sbjct: 1   MHVARHRSGPQSEFMGIWRPRLQVLLRGKENWRILEEQYSLRLRSLLFLKMPGGGEITAD 60

Query: 61  PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVK 120
           PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVK
Sbjct: 61  PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVK 120

Query: 121 EIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYV 180
           EIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYV
Sbjct: 121 EIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYV 180

Query: 181 VEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 233
           VEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD
Sbjct: 181 VEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 232

[Close]

BLAST of CSPI05G26210 vs. NCBI nr
Match: gi|778706292|ref|XP_011655829.1| (PREDICTED: uncharacterized protein LOC101206496 isoform X1 [Cucumis sativus])

HSP 1 Score: 468.4 bits (1204), Expect = 7.4e-129
Identity = 231/240 (96.25%), Postives = 231/240 (96.25%), Query Frame = 1


Query: 1   MHVARHRSGPQSEFMGIWRPRLQVLLRRKENWRILEEQYSLRLRSLLFLKMPGGGEITAD 60
           MHVARHRSGPQSEFMGIWRPRLQVLLR KENWRILEEQYSLRLRSLLFLKMPGGGEITAD
Sbjct: 1   MHVARHRSGPQSEFMGIWRPRLQVLLRGKENWRILEEQYSLRLRSLLFLKMPGGGEITAD 60

Query: 61  PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHG-- 120
           PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHG  
Sbjct: 61  PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGCS 120

Query: 121 ------VKEIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDL 180
                 VKEIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDL
Sbjct: 121 VFRFCSVKEIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDL 180

Query: 181 ESLIKLYVVEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 233
           ESLIKLYVVEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD
Sbjct: 181 ESLIKLYVVEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 240

[Close]

BLAST of CSPI05G26210 vs. NCBI nr
Match: gi|659091813|ref|XP_008446746.1| (PREDICTED: uncharacterized protein LOC103489375 [Cucumis melo])

HSP 1 Score: 442.2 bits (1136), Expect = 5.6e-121
Identity = 217/232 (93.53%), Postives = 222/232 (95.69%), Query Frame = 1


Query: 1   MHVARHRSGPQSEFMGIWRPRLQVLLRRKENWRILEEQYSLRLRSLLFLKMPGGGEITAD 60
           MHVARH SGPQSEFMGIWR R QVLLRR+ENW ILE Q+SLRLRSLLFLKMPG GEITAD
Sbjct: 1   MHVARHLSGPQSEFMGIWRMRPQVLLRRRENWTILEGQHSLRLRSLLFLKMPGDGEITAD 60

Query: 61  PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVK 120
           PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASF+DPLTRA+GVK
Sbjct: 61  PTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFKDPLTRAYGVK 120

Query: 121 EIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYV 180
           EIKSAFYSLSKVFSESRIVEY+F ERLISPGKHEI VDNKQHYKFLGRNIDLESLIKLYV
Sbjct: 121 EIKSAFYSLSKVFSESRIVEYDFKERLISPGKHEIIVDNKQHYKFLGRNIDLESLIKLYV 180

Query: 181 VEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 233
           VEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRR  MLATHAMMGFGKD
Sbjct: 181 VEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRGTMLATHAMMGFGKD 232

[Close]

BLAST of CSPI05G26210 vs. NCBI nr
Match: gi|1009119663|ref|XP_015876502.1| (PREDICTED: uncharacterized protein LOC107413142 [Ziziphus jujuba])

HSP 1 Score: 272.3 bits (695), Expect = 7.7e-70
Identity = 131/178 (73.60%), Postives = 149/178 (83.71%), Query Frame = 1


Query: 55  GEITADPTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLT 114
           G+  AD T EAC+K +CD   TK L+D I+PHILNLY S ATPRDFEIY P+ASFEDPL 
Sbjct: 63  GKEDADQTREACSKGSCDVFPTKGLSDSIIPHILNLYASCATPRDFEIYDPNASFEDPLM 122

Query: 115 RAHGVKEIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLES 174
            AHGVK+IKSAFYSLSKVFSES+IVEY+  E   SPGK E+ +DNKQHYKFLG+NID+ S
Sbjct: 123 CAHGVKQIKSAFYSLSKVFSESKIVEYSVKENWTSPGKGEMLIDNKQHYKFLGKNIDMIS 182

Query: 175 LIKLYVVEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 233
           LIKLYV EGK+VRHEDWW+KKPL NRETV LP+ GR +EMTRR +MLATHAMMGFGKD
Sbjct: 183 LIKLYVEEGKVVRHEDWWDKKPLWNRETVNLPLAGRIMEMTRRGSMLATHAMMGFGKD 240

[Close]

BLAST of CSPI05G26210 vs. NCBI nr
Match: gi|743831955|ref|XP_011024159.1| (PREDICTED: uncharacterized protein LOC105125427 [Populus euphratica])

HSP 1 Score: 266.9 bits (681), Expect = 3.2e-68
Identity = 124/173 (71.68%), Postives = 148/173 (85.55%), Query Frame = 1


Query: 60  DPTIEACTKEACDSKTTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGV 119
           D T E C+KE+C+ K  K ++DDI+PH+LNLYGS ATPRDFEIYA +ASFEDPL  AHGV
Sbjct: 12  DETRECCSKESCEYKPGKPISDDIIPHLLNLYGSCATPRDFEIYASNASFEDPLMCAHGV 71

Query: 120 KEIKSAFYSLSKVFSESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLY 179
           K+IKSAFYSLSK+FSESRIVEY+  E+ +SP K EI +DNKQ+YKFLGR+ID+ SLIKLY
Sbjct: 72  KQIKSAFYSLSKIFSESRIVEYSVEEKAVSPKKQEILIDNKQNYKFLGRSIDMISLIKLY 131

Query: 180 VVEGKIVRHEDWWNKKPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 233
           V +GK+VRHEDWW+KKPL NRET++ PM GRF+E  RR +MLATHAMMGFGKD
Sbjct: 132 VEDGKVVRHEDWWDKKPLRNRETIKFPMAGRFMETLRRGSMLATHAMMGFGKD 184

The following BLAST results are available for this feature:

BLAST of CSPI05G26210 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI05G26210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUR1_CUCSA	3.2e-131	99.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613550 PE=4 SV=1	[more]
A9PJT0_9ROSI	3.0e-68	72.25	Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2...	[more]
B9HVK6_POPTR	3.0e-68	72.25	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24810g PE=4 SV=1	[more]
A0A0B0PI34_GOSAR	8.6e-68	76.05	Polyprotein OS=Gossypium arboreum GN=F383_08364 PE=4 SV=1	[more]
V4TZH1_9ROSI	4.3e-67	72.25	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016517mg PE=4 SV=1	[more]

BLAST of CSPI05G26210 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G04830.1	5.9e-68	70.52	Nuclear transport factor 2 (NTF2) family protein	[more]

BLAST of CSPI05G26210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434514\|ref\|XP_004135041.1\|	4.6e-131	99.57	PREDICTED: uncharacterized protein LOC101206496 isoform X2 [Cucumis sativus]	[more]
gi\|778706292\|ref\|XP_011655829.1\|	7.4e-129	96.25	PREDICTED: uncharacterized protein LOC101206496 isoform X1 [Cucumis sativus]	[more]
gi\|659091813\|ref\|XP_008446746.1\|	5.6e-121	93.53	PREDICTED: uncharacterized protein LOC103489375 [Cucumis melo]	[more]
gi\|1009119663\|ref\|XP_015876502.1\|	7.7e-70	73.60	PREDICTED: uncharacterized protein LOC107413142 [Ziziphus jujuba]	[more]
gi\|743831955\|ref\|XP_011024159.1\|	3.2e-68	71.68	PREDICTED: uncharacterized protein LOC105125427 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G26210.1	CSPI05G26210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34213	FAMILY NOT NAMED	coord: 60..232 score: 8.6
None	No IPR available	PANTHER	PTHR34213:SF2	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN	coord: 60..232 score: 8.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G26210	Cla020481	Watermelon (97103) v1	cpiwmB410
CSPI05G26210	Csa5G613550	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G26210	MELO3C012339	Melon (DHL92) v3.5.1	cpimeB369
CSPI05G26210	ClCG05G021890	Watermelon (Charleston Gray)	cpiwcgB412
CSPI05G26210	Lsi04G001580	Bottle gourd (USVL1VR-Ls)	cpilsiB372
CSPI05G26210	MELO3C012339.2	Melon (DHL92) v3.6.1	cpimedB363
CSPI05G26210	CsaV3_5G035250	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G26210	Cla97C05G103590	Watermelon (97103) v2	cpiwmbB402
CSPI05G26210	Cucsa.282710	Cucumber (Gy14) v1	cgycpiB432
CSPI05G26210	CmoCh04G015140	Cucurbita moschata (Rifu)	cmocpiB745
CSPI05G26210	Cp4.1LG01g14170	Cucurbita pepo (Zucchini)	cpecpiB439
CSPI05G26210	Carg01897	Silver-seed gourd	carcpiB0877

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G26210	Wax gourd	cpiwgoB506
CSPI05G26210	Cucurbita maxima (Rimu)	cmacpiB423
CSPI05G26210	Cucurbita maxima (Rimu)	cmacpiB755
CSPI05G26210	Cucurbita moschata (Rifu)	cmocpiB411
CSPI05G26210	Cucurbita pepo (Zucchini)	cpecpiB036
CSPI05G26210	Cucumber (Gy14) v2	cgybcpiB225
CSPI05G26210	Silver-seed gourd	carcpiB1088