ClCG05G018250 (gene) Watermelon (Charleston Gray)

NameClCG05G018250
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 30545683 .. 30546240 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATCGGATCTTCCAAGAACATCCTTGGTTAGGGGAAGGTCGGTTGGGGGTTTACTTATAAAAAAGCCAAGTCTCCCTCTTTTACATTCACCATTTACATCTTATCAGATTCTCTGTCTATTGTGCAGATTGTTACACCAAACAGTAAAAGAAAAGCTTCTAACCTGGAAAGACACCATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGGCTGAGAGAACAATGGCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTTCTCGGTGTCGTCGTTCTTCTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTCGACTTCAAGCTATTTCTTTTGGCTTTGCCATTTTTGCTGATCTTTGTTGCAAATTCTATTGCTGTGTCTGGTACAGTTGGTTCTGCTGCCATGAGAACTAAGAACAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGTCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTCGGTCAAAGTGGTCACCTCCATCTTAA

mRNA sequence

ATGAGATCGGATCTTCCAAGAACATCCTTGGTTAGGGGAAGATTGTTACACCAAACAGTAAAAGAAAAGCTTCTAACCTGGAAAGACACCATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGGCTGAGAGAACAATGGCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTTCTCGGTGTCGTCGTTCTTCTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTCGACTTCAAGCTATTTCTTTTGGCTTTGCCATTTTTGCTGATCTTTGTTGCAAATTCTATTGCTGTGTCTGGTACAGTTGGTTCTGCTGCCATGAGAACTAAGAACAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGTCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTCGGTCAAAGTGGTCACCTCCATCTTAA

Coding sequence (CDS)

ATGAGATCGGATCTTCCAAGAACATCCTTGGTTAGGGGAAGATTGTTACACCAAACAGTAAAAGAAAAGCTTCTAACCTGGAAAGACACCATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGGCTGAGAGAACAATGGCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTTCTCGGTGTCGTCGTTCTTCTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTCGACTTCAAGCTATTTCTTTTGGCTTTGCCATTTTTGCTGATCTTTGTTGCAAATTCTATTGCTGTGTCTGGTACAGTTGGTTCTGCTGCCATGAGAACTAAGAACAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGTCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTCGGTCAAAGTGGTCACCTCCATCTTAA

Protein sequence

MRSDLPRTSLVRGRLLHQTVKEKLLTWKDTMSWVVEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQMVFDFKLFLLALPFLLIFVANSIAVSGTVGSAAMRTKNRSAQEAERTSPWGVAVLLFLLLILLWNRPYFRSKWSPPS
BLAST of ClCG05G018250 vs. TrEMBL
Match: A0A0A0LE80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872200 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.2e-59
Identity = 115/125 (92.00%), Postives = 120/125 (96.00%), Query Frame = 1

Query: 31  MSWVVEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQMVFDFKLFLLAL 90
           MSWVVEERGPEWKYGW ER M+SMSLPPMPLLAFLGVVVLLLSLQSQQMV DFKL LLAL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 91  PFLLIFVANSIAVSGTVGSAAMRTKNRSAQEAERTSPWGVAVLLFLLLILLWNRPYFRSK 150
           PFL+IFVANS+AVSGTVGSA+MRTK+RSAQEAERTSPWG AVLLFLLLILLWNRPYFRSK
Sbjct: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120

Query: 151 WSPPS 156
           WSPPS
Sbjct: 121 WSPPS 125

BLAST of ClCG05G018250 vs. TrEMBL
Match: W9RNV3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016054 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.5e-25
Identity = 65/134 (48.51%), Postives = 87/134 (64.93%), Query Frame = 1

Query: 31  MSWVVEE--RGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSL--------QSQQMV 90
           M W++ E   G  WK GW ERT+AS++ PP+PLLA +G+VV+LLS+        Q Q+ V
Sbjct: 1   MGWLIREDRSGSSWKLGWTERTLASLTAPPLPLLAIVGIVVVLLSVSSYANYKSQMQKTV 60

Query: 91  FDFKLFLLALPFLLIFVANSIAVSGTVGSAAMRTKNRSAQEAERTSPWGVAVLLFLLLIL 150
             F+LFLL LP +LIFVA+S+   GTV     RTK+ +  E   T PWGV VLL +L +L
Sbjct: 61  IGFRLFLLLLPLVLIFVAHSVTKYGTVLVVRPRTKHEAVSEGGGT-PWGVVVLLVVLAVL 120

Query: 151 LWNRPYFRSKWSPP 155
           +  + YF+SKW PP
Sbjct: 121 ISYQSYFQSKWWPP 133

BLAST of ClCG05G018250 vs. TrEMBL
Match: A0A0A0LNS9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368800 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.6e-23
Identity = 62/135 (45.93%), Postives = 83/135 (61.48%), Query Frame = 1

Query: 31  MSWVVEER-GPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQS--------QQMVF 90
           M W++ ER GP WK GWAE+ ++S++ PP PLLA LG++V+LLS+ S        ++   
Sbjct: 1   MGWLIRERRGPAWKQGWAEQALSSITPPPRPLLAILGILVILLSVSSYSSYRSQVKKTRI 60

Query: 91  DFKLFLLALPFLLIFVANSIAVSGTVGSAAMRTKNRS---AQEAERTSPWGVAVLLFLLL 150
           +FKLF L LP + +FV NSI   G +     RTK       + A   SPWG AVLL +LL
Sbjct: 61  NFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVTEGAASASPWGAAVLLVVLL 120

Query: 151 ILLWNRPYFRSKWSP 154
           +LL  +PYF SKW P
Sbjct: 121 VLLSYQPYFHSKWFP 135

BLAST of ClCG05G018250 vs. TrEMBL
Match: B9GQV0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s02370g PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.4e-18
Identity = 54/132 (40.91%), Postives = 79/132 (59.85%), Query Frame = 1

Query: 31  MSWVVEE-RGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSL--------QSQQMVF 90
           M+W+++  RGP WK  W +RT+AS+SLPP PL+A   +++LLLS+        Q Q  + 
Sbjct: 1   MAWLLKHTRGPAWKQEWTQRTLASLSLPPFPLVAIFFIIILLLSVSSFMSYKNQMQHALI 60

Query: 91  DFKLFLLALPFLLIFVANSIAVSGTVGSAAMRTKNRSAQEAERTSPWGVAVLLFLLLILL 150
           +FKL LL LP LLIF+A   +   T      + +  SA       PWG+AVL+ +LL+++
Sbjct: 61  NFKLLLLFLPVLLIFLAMFASKVETFMFPNTKAQYGSADNRSWNLPWGLAVLVVVLLVMV 120

Query: 151 WNRPYFRSKWSP 154
             R  F+S WSP
Sbjct: 121 NYRSSFQSMWSP 132

BLAST of ClCG05G018250 vs. TrEMBL
Match: A0A061FCF7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_034228 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.1e-18
Identity = 51/131 (38.93%), Postives = 74/131 (56.49%), Query Frame = 1

Query: 31  MSWVVEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQS--------QQMVFD 90
           M W  +ERGP WK GW E+ + S+S PP+PLL+  G++ LLL + S           + +
Sbjct: 1   MGWFFKERGPGWKQGWTEQVITSISPPPLPLLSIFGIICLLLLVSSYVSFKKEIHHSMLN 60

Query: 91  FKLFLLALPFLLIFVANSIAVSGTVGSAAMRTKNRSAQEAERTSPWGVAVLLFLLLILLW 150
            KLFLL LP +LIF A  ++          +TK R  +   R  PWG+ +LL +LL+++ 
Sbjct: 61  LKLFLLFLPLVLIFAAQFVSKCERFVIPYAKTK-RELEYRTRNLPWGMVMLLVVLLVMVS 120

Query: 151 NRPYFRSKWSP 154
            + YF S WSP
Sbjct: 121 YQSYFHSMWSP 130

BLAST of ClCG05G018250 vs. TAIR10
Match: AT5G42146.1 (AT5G42146.1 unknown protein)

HSP 1 Score: 88.2 bits (217), Expect = 4.9e-18
Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 1

Query: 31  MSWVVEER-GPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQS--------QQMVF 90
           M W ++ER G  WK GW E T+ + S PP+ LLA L ++ LLL L S        ++   
Sbjct: 1   MGWFIKERRGGSWKRGWLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAA 60

Query: 91  DFKLFLLALPFLLIFVANSIAVSGTV---GSAAMRTKNRSAQEAERTSPWGVAVLLFLLL 150
           + KLF+L LP L +FV  S++    +    S ++R     +   E   PWGV ++L LLL
Sbjct: 61  NLKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLL 120

Query: 151 ILLWNRPYFRSKWSP 154
           +L+  + YF S W P
Sbjct: 121 LLVSKQSYFHSLWYP 135

BLAST of ClCG05G018250 vs. NCBI nr
Match: gi|700204905|gb|KGN60038.1| (hypothetical protein Csa_3G872200 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 3.1e-59
Identity = 115/125 (92.00%), Postives = 120/125 (96.00%), Query Frame = 1

Query: 31  MSWVVEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQMVFDFKLFLLAL 90
           MSWVVEERGPEWKYGW ER M+SMSLPPMPLLAFLGVVVLLLSLQSQQMV DFKL LLAL
Sbjct: 1   MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60

Query: 91  PFLLIFVANSIAVSGTVGSAAMRTKNRSAQEAERTSPWGVAVLLFLLLILLWNRPYFRSK 150
           PFL+IFVANS+AVSGTVGSA+MRTK+RSAQEAERTSPWG AVLLFLLLILLWNRPYFRSK
Sbjct: 61  PFLMIFVANSVAVSGTVGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRSK 120

Query: 151 WSPPS 156
           WSPPS
Sbjct: 121 WSPPS 125

BLAST of ClCG05G018250 vs. NCBI nr
Match: gi|703129815|ref|XP_010104455.1| (hypothetical protein L484_016054 [Morus notabilis])

HSP 1 Score: 122.9 bits (307), Expect = 5.0e-25
Identity = 65/134 (48.51%), Postives = 87/134 (64.93%), Query Frame = 1

Query: 31  MSWVVEE--RGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSL--------QSQQMV 90
           M W++ E   G  WK GW ERT+AS++ PP+PLLA +G+VV+LLS+        Q Q+ V
Sbjct: 1   MGWLIREDRSGSSWKLGWTERTLASLTAPPLPLLAIVGIVVVLLSVSSYANYKSQMQKTV 60

Query: 91  FDFKLFLLALPFLLIFVANSIAVSGTVGSAAMRTKNRSAQEAERTSPWGVAVLLFLLLIL 150
             F+LFLL LP +LIFVA+S+   GTV     RTK+ +  E   T PWGV VLL +L +L
Sbjct: 61  IGFRLFLLLLPLVLIFVAHSVTKYGTVLVVRPRTKHEAVSEGGGT-PWGVVVLLVVLAVL 120

Query: 151 LWNRPYFRSKWSPP 155
           +  + YF+SKW PP
Sbjct: 121 ISYQSYFQSKWWPP 133

BLAST of ClCG05G018250 vs. NCBI nr
Match: gi|659088113|ref|XP_008444809.1| (PREDICTED: uncharacterized protein LOC103488045 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 4.7e-23
Identity = 65/148 (43.92%), Postives = 90/148 (60.81%), Query Frame = 1

Query: 18  QTVKEKLLTWKDTMSWVVEER-GPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQS 77
           +T +EK+   +  M W++ ER GP WK GWAE+ ++S++ PP PLLA LG++V+LLS+ S
Sbjct: 11  ETEREKI---RRQMGWLIRERRGPAWKQGWAEQALSSITPPPRPLLAILGILVILLSVSS 70

Query: 78  --------QQMVFDFKLFLLALPFLLIFVANSIAVSGTVGSAAMRTKNRS---AQEAERT 137
                   ++   +FKLF L LP + +FV NSI   G +     RTK       + A   
Sbjct: 71  YSSYRSQVKKTRINFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVTEGAASA 130

Query: 138 SPWGVAVLLFLLLILLWNRPYFRSKWSP 154
           SPWG AVLL +LL+LL  +PYF SKW P
Sbjct: 131 SPWGAAVLLVVLLVLLSYQPYFHSKWFP 155

BLAST of ClCG05G018250 vs. NCBI nr
Match: gi|700207560|gb|KGN62679.1| (hypothetical protein Csa_2G368800 [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 1.4e-22
Identity = 62/135 (45.93%), Postives = 83/135 (61.48%), Query Frame = 1

Query: 31  MSWVVEER-GPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQS--------QQMVF 90
           M W++ ER GP WK GWAE+ ++S++ PP PLLA LG++V+LLS+ S        ++   
Sbjct: 1   MGWLIRERRGPAWKQGWAEQALSSITPPPRPLLAILGILVILLSVSSYSSYRSQVKKTRI 60

Query: 91  DFKLFLLALPFLLIFVANSIAVSGTVGSAAMRTKNRS---AQEAERTSPWGVAVLLFLLL 150
           +FKLF L LP + +FV NSI   G +     RTK       + A   SPWG AVLL +LL
Sbjct: 61  NFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVTEGAASASPWGAAVLLVVLL 120

Query: 151 ILLWNRPYFRSKWSP 154
           +LL  +PYF SKW P
Sbjct: 121 VLLSYQPYFHSKWFP 135

BLAST of ClCG05G018250 vs. NCBI nr
Match: gi|1009168959|ref|XP_015902940.1| (PREDICTED: uncharacterized protein LOC107435829 [Ziziphus jujuba])

HSP 1 Score: 112.5 bits (280), Expect = 6.8e-22
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 1

Query: 31  MSWVVEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLS--------LQSQQMVFD 90
           M W+  E   E K GW ERT+AS+S PP+PLLA +G+VV+LLS        +Q Q+ +  
Sbjct: 1   MGWLFREIRGE-KQGWTERTLASISAPPLPLLAIVGIVVVLLSISSYTSFKMQMQRSIIG 60

Query: 91  FKLFLLALPFLLIFVANSIAVSGTVGSAAMRTKNRSAQEAERTSPWGVAVLLFLLLILLW 150
           FKLFL  LP +LIFVA+SI   G     + RTK  S+ ++   SPW VA+L+ +LL++++
Sbjct: 61  FKLFLFFLPLVLIFVAHSITRYGRFVVISPRTKEVSSSQS-GGSPWAVAMLVVVLLLMIF 120

Query: 151 NRPYFRSKWSPP 155
            +PYF SKW PP
Sbjct: 121 YQPYFHSKWWPP 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LE80_CUCSA2.2e-5992.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872200 PE=4 SV=1[more]
W9RNV3_9ROSA3.5e-2548.51Uncharacterized protein OS=Morus notabilis GN=L484_016054 PE=4 SV=1[more]
A0A0A0LNS9_CUCSA9.6e-2345.93Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368800 PE=4 SV=1[more]
B9GQV0_POPTR5.4e-1840.91Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s02370g PE=4 SV=1[more]
A0A061FCF7_THECC7.1e-1838.93Uncharacterized protein OS=Theobroma cacao GN=TCM_034228 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G42146.14.9e-1837.04 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700204905|gb|KGN60038.1|3.1e-5992.00hypothetical protein Csa_3G872200 [Cucumis sativus][more]
gi|703129815|ref|XP_010104455.1|5.0e-2548.51hypothetical protein L484_016054 [Morus notabilis][more]
gi|659088113|ref|XP_008444809.1|4.7e-2343.92PREDICTED: uncharacterized protein LOC103488045 [Cucumis melo][more]
gi|700207560|gb|KGN62679.1|1.4e-2245.93hypothetical protein Csa_2G368800 [Cucumis sativus][more]
gi|1009168959|ref|XP_015902940.1|6.8e-2246.97PREDICTED: uncharacterized protein LOC107435829 [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G018250.1ClCG05G018250.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33306FAMILY NOT NAMEDcoord: 31..153
score: 5.7
NoneNo IPR availablePANTHERPTHR33306:SF5SUBFAMILY NOT NAMEDcoord: 31..153
score: 5.7

The following gene(s) are paralogous to this gene:

None