ClCG05G018250 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGATCGGATCTTCCAAGAACATCCTTGGTTAGGGGAAGGTCGGTTGGGGGTTTACTTATAAAAAAGCCAAGTCTCCCTCTTTTACATTCACCATTTACATCTTATCAGATTCTCTGTCTATTGTGCAGATTGTTACACCAAACAGTAAAAGAAAAGCTTCTAACCTGGAAAGACACCATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGGCTGAGAGAACAATGGCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTTCTCGGTGTCGTCGTTCTTCTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTCGACTTCAAGCTATTTCTTTTGGCTTTGCCATTTTTGCTGATCTTTGTTGCAAATTCTATTGCTGTGTCTGGTACAGTTGGTTCTGCTGCCATGAGAACTAAGAACAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGTCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTCGGTCAAAGTGGTCACCTCCATCTTAA ATGAGATCGGATCTTCCAAGAACATCCTTGGTTAGGGGAAGATTGTTACACCAAACAGTAAAAGAAAAGCTTCTAACCTGGAAAGACACCATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGGCTGAGAGAACAATGGCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTTCTCGGTGTCGTCGTTCTTCTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTCGACTTCAAGCTATTTCTTTTGGCTTTGCCATTTTTGCTGATCTTTGTTGCAAATTCTATTGCTGTGTCTGGTACAGTTGGTTCTGCTGCCATGAGAACTAAGAACAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGTCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTCGGTCAAAGTGGTCACCTCCATCTTAA ATGAGATCGGATCTTCCAAGAACATCCTTGGTTAGGGGAAGATTGTTACACCAAACAGTAAAAGAAAAGCTTCTAACCTGGAAAGACACCATGAGTTGGGTGGTGGAGGAAAGAGGTCCCGAGTGGAAGTATGGATGGGCTGAGAGAACAATGGCTTCCATGTCTCTCCCGCCTATGCCGCTGCTCGCATTTCTCGGTGTCGTCGTTCTTCTGCTTTCTTTGCAGTCTCAGCAGATGGTGTTCGACTTCAAGCTATTTCTTTTGGCTTTGCCATTTTTGCTGATCTTTGTTGCAAATTCTATTGCTGTGTCTGGTACAGTTGGTTCTGCTGCCATGAGAACTAAGAACAGGTCGGCTCAGGAGGCCGAGAGGACCTCACCTTGGGGCGTCGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTGTGGAACCGTCCTTACTTTCGGTCAAAGTGGTCACCTCCATCTTAA MRSDLPRTSLVRGRLLHQTVKEKLLTWKDTMSWVVEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQMVFDFKLFLLALPFLLIFVANSIAVSGTVGSAAMRTKNRSAQEAERTSPWGVAVLLFLLLILLWNRPYFRSKWSPPS
BLAST of ClCG05G018250 vs. TrEMBL
Match: A0A0A0LE80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872200 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.2e-59 Identity = 115/125 (92.00%), Postives = 120/125 (96.00%), Query Frame = 1
BLAST of ClCG05G018250 vs. TrEMBL
Match: W9RNV3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016054 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 3.5e-25 Identity = 65/134 (48.51%), Postives = 87/134 (64.93%), Query Frame = 1
BLAST of ClCG05G018250 vs. TrEMBL
Match: A0A0A0LNS9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368800 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 9.6e-23 Identity = 62/135 (45.93%), Postives = 83/135 (61.48%), Query Frame = 1
BLAST of ClCG05G018250 vs. TrEMBL
Match: B9GQV0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s02370g PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.4e-18 Identity = 54/132 (40.91%), Postives = 79/132 (59.85%), Query Frame = 1
BLAST of ClCG05G018250 vs. TrEMBL
Match: A0A061FCF7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_034228 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 7.1e-18 Identity = 51/131 (38.93%), Postives = 74/131 (56.49%), Query Frame = 1
BLAST of ClCG05G018250 vs. TAIR10
Match: AT5G42146.1 (AT5G42146.1 unknown protein) HSP 1 Score: 88.2 bits (217), Expect = 4.9e-18 Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 1
BLAST of ClCG05G018250 vs. NCBI nr
Match: gi|700204905|gb|KGN60038.1| (hypothetical protein Csa_3G872200 [Cucumis sativus]) HSP 1 Score: 236.5 bits (602), Expect = 3.1e-59 Identity = 115/125 (92.00%), Postives = 120/125 (96.00%), Query Frame = 1
BLAST of ClCG05G018250 vs. NCBI nr
Match: gi|703129815|ref|XP_010104455.1| (hypothetical protein L484_016054 [Morus notabilis]) HSP 1 Score: 122.9 bits (307), Expect = 5.0e-25 Identity = 65/134 (48.51%), Postives = 87/134 (64.93%), Query Frame = 1
BLAST of ClCG05G018250 vs. NCBI nr
Match: gi|659088113|ref|XP_008444809.1| (PREDICTED: uncharacterized protein LOC103488045 [Cucumis melo]) HSP 1 Score: 116.3 bits (290), Expect = 4.7e-23 Identity = 65/148 (43.92%), Postives = 90/148 (60.81%), Query Frame = 1
BLAST of ClCG05G018250 vs. NCBI nr
Match: gi|700207560|gb|KGN62679.1| (hypothetical protein Csa_2G368800 [Cucumis sativus]) HSP 1 Score: 114.8 bits (286), Expect = 1.4e-22 Identity = 62/135 (45.93%), Postives = 83/135 (61.48%), Query Frame = 1
BLAST of ClCG05G018250 vs. NCBI nr
Match: gi|1009168959|ref|XP_015902940.1| (PREDICTED: uncharacterized protein LOC107435829 [Ziziphus jujuba]) HSP 1 Score: 112.5 bits (280), Expect = 6.8e-22 Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |