ClCG05G015130 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAATATAAGGAAATTGTACTTTCCCCTTCCGCTCCTTTTATTCTTCGGCATTTCTTTGGGAATGAACAGATAAAAGGGAAAAGGAAGAAGAAGCAAGAGAAGAAAAAAATCAGCGGCTGAAAAATCAAGAGGGTTACAAGAAGAAGGAGAACAACAACAAGAGTGAATCTGAGATTTCGAAGAAGAAATGAAGAAGTGCGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGTGAGTCGGATCAGGCGAACCTATGTTGGGACTGCGACGAGAAGGTTCACTGTGCAAATTTTCTTGTTGCTAAACATTCTCGGAGCCTTCTTTGTCATGTATGCCAGTCTCCGACTCCATGGGCTGCCTCTGGTCGGAAGCTTACGCCGACGGTTTCTGTGTGCGAGGGGTGTGTCGATGTCCATGGTGGTAAATGCGAGCAAGGTGGATTTCAAGAGCGGCGTAGAGATAACGAGGAGGAAGTTGATGGTGGTGATGATTTTGACGATGGTGAAGGTTTCGATAGTTATGAGGGAGGTGATAGTGAGGAAGACGATGATGGGGATGAAGATGAGGACGAGGAGGAAGAGGATGAGGACGGAGAAAACCAGGTGGTGCCCTGGTCTTATGCATCTTCTTCGTCTCCACCACCGCCTCCGACAGTAACTTCTAGCAGCGAGGGCGAGATTTCAGCCGGCGCTGGTGTCGCATCGAAGCGGATGAGAGAATACGGCATCGATCTCGATTCCGATGTATGTACTTTTTAGGTTTTGTTTTCTTGCTATTGCCTTCTCTTCCGTGTTTTCCTTTTTTCCTGAGTCTGTGCTGAAGGAAATCATTCGGGATTTCGGAATCTTTTGTTCTTTCATTCGCTTTTCTGGAACCGGTGTTTTGACAAAATCATATCGTTTTTCTCACACAACAAAAATCAATGGTTTTCACTTCTCCAAGTGAATCTGACACAAGATTTGAACCGAATCGTTCTGTTTTATAATCTTCTTAACCTATGATTTCAATACGAATCGTTTTAATATGCCGATCTGAAACATAATCATCATTTTCCTAGTTCTTAATTTTCCAGTGATCCAAACTGGGTTTTTAGTAATCGTTTCACTTGAATGCAGGATGAAATCGAGTGTTCTTCTGCACCACAGAGTACAAGGCCATTTTTCAATGACGAAGCGACTTCCTCGAGTTCCCTTAGGCCACTGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCACATCCACTCCGGATGTTGAAGCTTGTAAAGCCGAGTTAAAATCCACGGCTGTCGTTAGATCTATCCAGAGACTCCAGAATCGTCTTCCCACCGACATTAACGATGCTTCCAAAATGATCTTTGGGATACGCAAAATGAGCAGAGATCAGAATCGTTGATTCTTCACTAACCACACAATGGAAGGTAGCTAGGGTTCTTAATTTTTTTTTTTCCTTTTTGGGGTTCATTTTTCTCACTAATTGTCTGTCATGATCGATTAATTCAAGGATTATACCTGTTTTCTCAAGTGTGTACAACCTAGAATTTCCCCCTCTATTTTCCATTAGGTAATCTTGTCATCATTTGTGAATCCTGTCAAGTGTAGCCAGATATTAATTTACCCAACTACATTCTATTAACAGATCTCTCTCTACACTTTATGAGTGTTTTCTTGATGCAATATCTCAATCAATATTACATAGTTGTTTAAAAGAGAGATTCTCACATTCTAGTTGTTGTGTTTATGTGGGTCTACGATGAC CTAATATAAGGAAATTGTACTTTCCCCTTCCGCTCCTTTTATTCTTCGGCATTTCTTTGGGAATGAACAGATAAAAGGGAAAAGGAAGAAGAAGCAAGAGAAGAAAAAAATCAGCGGCTGAAAAATCAAGAGGGTTACAAGAAGAAGGAGAACAACAACAAGAGTGAATCTGAGATTTCGAAGAAGAAATGAAGAAGTGCGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGTGAGTCGGATCAGGCGAACCTATGTTGGGACTGCGACGAGAAGGTTCACTGTGCAAATTTTCTTGTTGCTAAACATTCTCGGAGCCTTCTTTGTCATGTATGCCAGTCTCCGACTCCATGGGCTGCCTCTGGTCGGAAGCTTACGCCGACGGTTTCTGTGTGCGAGGGGTGTGTCGATGTCCATGGTGGTAAATGCGAGCAAGGTGGATTTCAAGAGCGGCGTAGAGATAACGAGGAGGAAGTTGATGGTGGTGATGATTTTGACGATGGTGAAGGTTTCGATAGTTATGAGGGAGGTGATAGTGAGGAAGACGATGATGGGGATGAAGATGAGGACGAGGAGGAAGAGGATGAGGACGGAGAAAACCAGGTGGTGCCCTGGTCTTATGCATCTTCTTCGTCTCCACCACCGCCTCCGACAGTAACTTCTAGCAGCGAGGGCGAGATTTCAGCCGGCGCTGGTGTCGCATCGAAGCGGATGAGAGAATACGGCATCGATCTCGATTCCGATGATGAAATCGAGTGTTCTTCTGCACCACAGAGTACAAGGCCATTTTTCAATGACGAAGCGACTTCCTCGAGTTCCCTTAGGCCACTGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCACATCCACTCCGGATGTTGAAGCTTGTAAAGCCGAGTTAAAATCCACGGCTGTCGTTAGATCTATCCAGAGACTCCAGAATCGTCTTCCCACCGACATTAACGATGCTTCCAAAATGATCTTTGGGATACGCAAAATGAGCAGAGATCAGAATCGTTGATTCTTCACTAACCACACAATGGAAGGTAGCTAGGGTTCTTAATTTTTTTTTTTCCTTTTTGGGGTTCATTTTTCTCACTAATTGTCTGTCATGATCGATTAATTCAAGGATTATACCTGTTTTCTCAAGTGTGTACAACCTAGAATTTCCCCCTCTATTTTCCATTAGGTAATCTTGTCATCATTTGTGAATCCTGTCAAGTGTAGCCAGATATTAATTTACCCAACTACATTCTATTAACAGATCTCTCTCTACACTTTATGAGTGTTTTCTTGATGCAATATCTCAATCAATATTACATAGTTGTTTAAAAGAGAGATTCTCACATTCTAGTTGTTGTGTTTATGTGGGTCTACGATGAC ATGAAGAAGTGCGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGTGAGTCGGATCAGGCGAACCTATGTTGGGACTGCGACGAGAAGGTTCACTGTGCAAATTTTCTTGTTGCTAAACATTCTCGGAGCCTTCTTTGTCATGTATGCCAGTCTCCGACTCCATGGGCTGCCTCTGGTCGGAAGCTTACGCCGACGGTTTCTGTGTGCGAGGGGTGTGTCGATGTCCATGGTGGTAAATGCGAGCAAGGTGGATTTCAAGAGCGGCGTAGAGATAACGAGGAGGAAGTTGATGGTGGTGATGATTTTGACGATGGTGAAGGTTTCGATAGTTATGAGGGAGGTGATAGTGAGGAAGACGATGATGGGGATGAAGATGAGGACGAGGAGGAAGAGGATGAGGACGGAGAAAACCAGGTGGTGCCCTGGTCTTATGCATCTTCTTCGTCTCCACCACCGCCTCCGACAGTAACTTCTAGCAGCGAGGGCGAGATTTCAGCCGGCGCTGGTGTCGCATCGAAGCGGATGAGAGAATACGGCATCGATCTCGATTCCGATGATGAAATCGAGTGTTCTTCTGCACCACAGAGTACAAGGCCATTTTTCAATGACGAAGCGACTTCCTCGAGTTCCCTTAGGCCACTGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCACATCCACTCCGGATGTTGAAGCTTGTAAAGCCGAGTTAAAATCCACGGCTGTCGTTAGATCTATCCAGAGACTCCAGAATCGTCTTCCCACCGACATTAACGATGCTTCCAAAATGATCTTTGGGATACGCAAAATGAGCAGAGATCAGAATCGTTGA MKKCELCGQQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWAASGRKLTPTVSVCEGCVDVHGGKCEQGGFQERRRDNEEEVDGGDDFDDGEGFDSYEGGDSEEDDDGDEDEDEEEEDEDGENQVVPWSYASSSSPPPPPTVTSSSEGEISAGAGVASKRMREYGIDLDSDDEIECSSAPQSTRPFFNDEATSSSSLRPLKQARVTGPTQSATSTPDVEACKAELKSTAVVRSIQRLQNRLPTDINDASKMIFGIRKMSRDQNR
BLAST of ClCG05G015130 vs. Swiss-Prot
Match: AN322_ORYSJ (Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 OS=Oryza sativa subsp. japonica GN=Os03g0668900 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 8.5e-07 Identity = 37/126 (29.37%), Postives = 63/126 (50.00%), Query Frame = 1
BLAST of ClCG05G015130 vs. Swiss-Prot
Match: Y8923_DICDI (Putative uncharacterized transmembrane protein DDB_G0290641 OS=Dictyostelium discoideum GN=DDB_G0290641 PE=4 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 1.9e-06 Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 1
HSP 2 Score: 53.5 bits (127), Expect = 4.2e-06 Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 1
HSP 3 Score: 40.0 bits (92), Expect = 4.8e-02 Identity = 18/67 (26.87%), Postives = 35/67 (52.24%), Query Frame = 1
HSP 4 Score: 32.7 bits (73), Expect = 7.7e+00 Identity = 20/73 (27.40%), Postives = 35/73 (47.95%), Query Frame = 1
BLAST of ClCG05G015130 vs. Swiss-Prot
Match: BFR2_CRYNJ (Protein BFR2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=BFR2 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 7.2e-06 Identity = 47/166 (28.31%), Postives = 70/166 (42.17%), Query Frame = 1
HSP 2 Score: 47.4 bits (111), Expect = 3.0e-04 Identity = 25/90 (27.78%), Postives = 45/90 (50.00%), Query Frame = 1
HSP 3 Score: 38.5 bits (88), Expect = 1.4e-01 Identity = 26/104 (25.00%), Postives = 44/104 (42.31%), Query Frame = 1
BLAST of ClCG05G015130 vs. Swiss-Prot
Match: BFR2_CRYNB (Protein BFR2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=BFR2 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 7.2e-06 Identity = 47/166 (28.31%), Postives = 70/166 (42.17%), Query Frame = 1
HSP 2 Score: 47.4 bits (111), Expect = 3.0e-04 Identity = 25/90 (27.78%), Postives = 45/90 (50.00%), Query Frame = 1
HSP 3 Score: 38.5 bits (88), Expect = 1.4e-01 Identity = 26/104 (25.00%), Postives = 44/104 (42.31%), Query Frame = 1
BLAST of ClCG05G015130 vs. Swiss-Prot
Match: ICP22_SUHVK (Transcriptional regulator ICP22 homolog OS=Suid herpesvirus 1 (strain Kaplan) GN=RSP40 PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.4e-06 Identity = 29/74 (39.19%), Postives = 39/74 (52.70%), Query Frame = 1
HSP 2 Score: 50.4 bits (119), Expect = 3.6e-05 Identity = 30/82 (36.59%), Postives = 40/82 (48.78%), Query Frame = 1
HSP 3 Score: 46.2 bits (108), Expect = 6.7e-04 Identity = 24/40 (60.00%), Postives = 27/40 (67.50%), Query Frame = 1
HSP 4 Score: 45.1 bits (105), Expect = 1.5e-03 Identity = 35/106 (33.02%), Postives = 45/106 (42.45%), Query Frame = 1
HSP 5 Score: 42.4 bits (98), Expect = 9.7e-03 Identity = 36/119 (30.25%), Postives = 47/119 (39.50%), Query Frame = 1
BLAST of ClCG05G015130 vs. TrEMBL
Match: A0A0A0LCX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G850640 PE=4 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 1.4e-144 Identity = 254/278 (91.37%), Postives = 261/278 (93.88%), Query Frame = 1
BLAST of ClCG05G015130 vs. TrEMBL
Match: A0A096MFX5_POEFO (Uncharacterized protein OS=Poecilia formosa PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.7e-07 Identity = 43/153 (28.10%), Postives = 74/153 (48.37%), Query Frame = 1
BLAST of ClCG05G015130 vs. TrEMBL
Match: A0A096MFX5_POEFO (Uncharacterized protein OS=Poecilia formosa PE=4 SV=1) HSP 1 Score: 30.0 bits (66), Expect = 5.6e+03 Identity = 31/110 (28.18%), Postives = 45/110 (40.91%), Query Frame = 1
HSP 2 Score: 61.6 bits (148), Expect = 1.7e-06 Identity = 47/168 (27.98%), Postives = 76/168 (45.24%), Query Frame = 1
BLAST of ClCG05G015130 vs. TrEMBL
Match: A0A0G4GMH7_9ALVE (Ribosome biogenesis protein BOP1 homolog OS=Chromera velia CCMP2878 GN=Cvel_22531 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.3e-06 Identity = 54/196 (27.55%), Postives = 91/196 (46.43%), Query Frame = 1
BLAST of ClCG05G015130 vs. TrEMBL
Match: A0A0G4GMH7_9ALVE (Ribosome biogenesis protein BOP1 homolog OS=Chromera velia CCMP2878 GN=Cvel_22531 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05 Identity = 61/237 (25.74%), Postives = 107/237 (45.15%), Query Frame = 1
HSP 2 Score: 40.4 bits (93), Expect = 4.1e+00 Identity = 22/57 (38.60%), Postives = 32/57 (56.14%), Query Frame = 1
HSP 3 Score: 59.7 bits (143), Expect = 6.6e-06 Identity = 36/100 (36.00%), Postives = 47/100 (47.00%), Query Frame = 1
BLAST of ClCG05G015130 vs. TAIR10
Match: AT4G27310.1 (AT4G27310.1 B-box type zinc finger family protein) HSP 1 Score: 182.6 bits (462), Expect = 3.4e-46 Identity = 105/208 (50.48%), Postives = 123/208 (59.13%), Query Frame = 1
BLAST of ClCG05G015130 vs. TAIR10
Match: AT5G54470.1 (AT5G54470.1 B-box type zinc finger family protein) HSP 1 Score: 151.8 bits (382), Expect = 6.4e-37 Identity = 93/210 (44.29%), Postives = 117/210 (55.71%), Query Frame = 1
BLAST of ClCG05G015130 vs. TAIR10
Match: AT3G27720.1 (AT3G27720.1 IBR domain containing protein) HSP 1 Score: 52.0 bits (123), Expect = 6.9e-07 Identity = 24/58 (41.38%), Postives = 40/58 (68.97%), Query Frame = 1
BLAST of ClCG05G015130 vs. TAIR10
Match: AT5G63740.1 (AT5G63740.1 RING/U-box superfamily protein) HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06 Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = 1
HSP 2 Score: 44.7 bits (104), Expect = 1.1e-04 Identity = 19/53 (35.85%), Postives = 32/53 (60.38%), Query Frame = 1
BLAST of ClCG05G015130 vs. TAIR10
Match: AT1G44050.1 (AT1G44050.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 48.9 bits (115), Expect = 5.9e-06 Identity = 23/73 (31.51%), Postives = 41/73 (56.16%), Query Frame = 1
HSP 2 Score: 46.6 bits (109), Expect = 2.9e-05 Identity = 16/49 (32.65%), Postives = 31/49 (63.27%), Query Frame = 1
HSP 3 Score: 46.6 bits (109), Expect = 2.9e-05 Identity = 19/52 (36.54%), Postives = 33/52 (63.46%), Query Frame = 1
HSP 4 Score: 46.2 bits (108), Expect = 3.8e-05 Identity = 26/96 (27.08%), Postives = 50/96 (52.08%), Query Frame = 1
HSP 5 Score: 42.4 bits (98), Expect = 5.5e-04 Identity = 18/53 (33.96%), Postives = 26/53 (49.06%), Query Frame = 1
BLAST of ClCG05G015130 vs. NCBI nr
Match: gi|659109244|ref|XP_008454616.1| (PREDICTED: nonsense-mediated mRNA decay protein 2 [Cucumis melo]) HSP 1 Score: 523.5 bits (1347), Expect = 2.3e-145 Identity = 254/278 (91.37%), Postives = 262/278 (94.24%), Query Frame = 1
BLAST of ClCG05G015130 vs. NCBI nr
Match: gi|449458205|ref|XP_004146838.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus]) HSP 1 Score: 520.4 bits (1339), Expect = 1.9e-144 Identity = 254/278 (91.37%), Postives = 261/278 (93.88%), Query Frame = 1
BLAST of ClCG05G015130 vs. NCBI nr
Match: gi|1009110738|ref|XP_015897222.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Ziziphus jujuba]) HSP 1 Score: 288.5 bits (737), Expect = 1.2e-74 Identity = 157/277 (56.68%), Postives = 194/277 (70.04%), Query Frame = 1
BLAST of ClCG05G015130 vs. NCBI nr
Match: gi|802586527|ref|XP_012070683.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 1 [Jatropha curcas]) HSP 1 Score: 260.0 bits (663), Expect = 4.7e-66 Identity = 144/280 (51.43%), Postives = 177/280 (63.21%), Query Frame = 1
BLAST of ClCG05G015130 vs. NCBI nr
Match: gi|567920044|ref|XP_006452028.1| (hypothetical protein CICLE_v10009213mg [Citrus clementina]) HSP 1 Score: 259.6 bits (662), Expect = 6.2e-66 Identity = 153/278 (55.04%), Postives = 180/278 (64.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |