Carg12777 (gene) Silver-seed gourd

Overview
NameCarg12777
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger, B-box
LocationCucurbita_argyrosperma_scaffold_043 : 185942 .. 187339 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAGGGAAATGCAAGATCGAGAAGAAGAAATCAGCGGCTGAAAAATCCAAGGCGGAGGAACGAGAAGATCAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAGGGGATCGGAGATTTCGAAGAAGAAATATGAAGAAGTGTGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGTGAGTCGGATCAGGCGAACCTGTGTTGGGACTGCGATGAGAATGTTCACTGTGCTAATTTTCTTGTTGCTAAACATTCTCGGAGCCTTCTTTGTCATGCGTGCCAGTCGCCGACTCCATGGGCGGCTTCTGGTCGGAAGCTTACGCCGACGGTTTCCGTCTGTGAAGGTTGTGTTGAAGTCCATGGTGGTAAATGCGAGGAAGGTAGATATCTTGAACGGCGTAGAGATAACGAGGAGGAAGTTGATGATGGTGATGATTTTGACGATGGTGAAGGTTTTGAGAGTTATGAGGGAGGTGATAGTGAGGAAGATGAGGATGACGATGACGGTGAGGAGGAGGAGGAGGAAGACGATGAGGACGGAGAAAACCAGGTGGTGCCGTGGTCCTGTGCATCGTCCTCGTCCCCACCACCGCCTCCGACAGTAACTTCTAGCAGCGAGGGTGAGATTTCAACCGGCGCTGGTGTCACATCGAAGCGTATGAGAGAGTGCGACGTCGATCTCGAATCCGATGTATGCATTCTTTAGTTTTTTTTTTTTGTTTGTTATTCCTCTTCTGTTTTCTTTTTCCTTAGTCTGCGCTGAAGTAATCGTTTGTGATTTTGAAATCTTTTGTTCCATTCGCTTTTCTAGAATCGGTGTTTTGATCAAATCATATCGTTTTCTCTCATGAAAAAAACCCTGTCGTTTTGATCAAATCAAGTGAATGAAGACTCCAGATTCTTACCGAATCGTTCTGTTTTATAACCTTGAACCTACGATTCTGATTGAAATCGTATGTAATATGCCGATCTGAAACATAATCACTATTTTTCTAGTTCATAATTTTACGGTGATCCAAACAGAGTTGTAATAATCGCTTGCTTCTTGAATGCAGGACGACATCGAGTATTCTTCCGCGCGACAGAGTACAAGGCCATTTTTCAATGAGGAAGCGACTTCCTCGAGTTCCCATAGGCCACTGAAGCAAGCAAGAGTTACGGGACCGACACAATCACCGAGCACCACCACAGCGGACGATGAAACTTATAAAGCAGATTTAAAATCCATATCTGTCGTTAGATCTATCCAGAAACTCCAGAATCGTCCGCCCACCGACATTAACGACGCTTCCAAAATGATTTTTGGGATATGCAAAATGAGTAGAGATCAGAATCGTTGATTTTTCACTAACCACACAATGGAAGGTAGCTAGGGCTTTTTCTTTTCCCTTTTGGGTTAATT

mRNA sequence

AAAAAGGGAAATGCAAGATCGAGAAGAAGAAATCAGCGGCTGAAAAATCCAAGGCGGAGGAACGAGAAGATCAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAGGGGATCGGAGATTTCGAAGAAGAAATATGAAGAAGTGTGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGTGAGTCGGATCAGGCGAACCTGTGTTGGGACTGCGATGAGAATGTTCACTGTGCTAATTTTCTTGTTGCTAAACATTCTCGGAGCCTTCTTTGTCATGCGTGCCAGTCGCCGACTCCATGGGCGGCTTCTGGTCGGAAGCTTACGCCGACGGTTTCCGTCTGTGAAGGTTGTGTTGAAGTCCATGGTGGTAAATGCGAGGAAGGTAGATATCTTGAACGGCGTAGAGATAACGAGGAGGAAGTTGATGATGGTGATGATTTTGACGATGGTGAAGGTTTTGAGAGTTATGAGGGAGGTGATAGTGAGGAAGATGAGGATGACGATGACGGTGAGGAGGAGGAGGAGGAAGACGATGAGGACGGAGAAAACCAGGTGGTGCCGTGGTCCTGTGCATCGTCCTCGTCCCCACCACCGCCTCCGACAGTAACTTCTAGCAGCGAGGGTGAGATTTCAACCGGCGCTGGTGTCACATCGAAGCGTATGAGAGAGTGCGACGTCGATCTCGAATCCGATGACGACATCGAGTATTCTTCCGCGCGACAGAGTACAAGGCCATTTTTCAATGAGGAAGCGACTTCCTCGAGTTCCCATAGGCCACTGAAGCAAGCAAGAGTTACGGGACCGACACAATCACCGAGCACCACCACAGCGGACGATGAAACTTATAAAGCAGATTTAAAATCCATATCTGTCGTTAGATCTATCCAGAAACTCCAGAATCGTCCGCCCACCGACATTAACGACGCTTCCAAAATGATTTTTGGGATATGCAAAATGAGTAGAGATCAGAATCGTTGATTTTTCACTAACCACACAATGGAAGGTAGCTAGGGCTTTTTCTTTTCCCTTTTGGGTTAATT

Coding sequence (CDS)

AAAAAGGGAAATGCAAGATCGAGAAGAAGAAATCAGCGGCTGAAAAATCCAAGGCGGAGGAACGAGAAGATCAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAGGGGATCGGAGATTTCGAAGAAGAAATATGAAGAAGTGTGAGCTGTGTGGGCAGCAAGCGAGGATGTTCTGTGAGTCGGATCAGGCGAACCTGTGTTGGGACTGCGATGAGAATGTTCACTGTGCTAATTTTCTTGTTGCTAAACATTCTCGGAGCCTTCTTTGTCATGCGTGCCAGTCGCCGACTCCATGGGCGGCTTCTGGTCGGAAGCTTACGCCGACGGTTTCCGTCTGTGAAGGTTGTGTTGAAGTCCATGGTGGTAAATGCGAGGAAGGTAGATATCTTGAACGGCGTAGAGATAACGAGGAGGAAGTTGATGATGGTGATGATTTTGACGATGGTGAAGGTTTTGAGAGTTATGAGGGAGGTGATAGTGAGGAAGATGAGGATGACGATGACGGTGAGGAGGAGGAGGAGGAAGACGATGAGGACGGAGAAAACCAGGTGGTGCCGTGGTCCTGTGCATCGTCCTCGTCCCCACCACCGCCTCCGACAGTAACTTCTAGCAGCGAGGGTGAGATTTCAACCGGCGCTGGTGTCACATCGAAGCGTATGAGAGAGTGCGACGTCGATCTCGAATCCGATGACGACATCGAGTATTCTTCCGCGCGACAGAGTACAAGGCCATTTTTCAATGAGGAAGCGACTTCCTCGAGTTCCCATAGGCCACTGAAGCAAGCAAGAGTTACGGGACCGACACAATCACCGAGCACCACCACAGCGGACGATGAAACTTATAAAGCAGATTTAAAATCCATATCTGTCGTTAGATCTATCCAGAAACTCCAGAATCGTCCGCCCACCGACATTAACGACGCTTCCAAAATGATTTTTGGGATATGCAAAATGAGTAGAGATCAGAATCGTTGA

Protein sequence

KKGNARSRRRNQRLKNPRRRNEKIKKKKKRRRRRGDRRFRRRNMKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGRKLTPTVSVCEGCVEVHGGKCEEGRYLERRRDNEEEVDDGDDFDDGEGFESYEGGDSEEDEDDDDGEEEEEEDDEDGENQVVPWSCASSSSPPPPPTVTSSSEGEISTGAGVTSKRMRECDVDLESDDDIEYSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDETYKADLKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR
Homology
[Close]
BLAST of Carg12777 vs. NCBI nr
Match: XP_023535120.1 (protein BFR2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.4 bits (973), Expect = 1.2e-101
Identity = 275/280 (98.21%), Postives = 275/280 (98.21%), Query Frame = 0 

Query: 44  MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 103
           MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 60

Query: 104 KLTPTVSVCEGCVEVHGGKCEEGRYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 163
           KLTPTVSVCEGCVEVHGGKCEEGRYL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEEGRYL-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMRECD 223
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMRECD
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMRECD 180

Query: 224 VDLESDDDIEYSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDETYKAD 283
           VDLESDDDIE SSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTT DDE YKAD
Sbjct: 181 VDLESDDDIECSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTPDDEAYKAD 240

Query: 284 LKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 324
           LKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR
Sbjct: 241 LKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 279

[Close]
BLAST of Carg12777 vs. NCBI nr
Match: XP_022936446.1 (protein BFR2 [Cucurbita moschata])

HSP 1 Score: 378.6 bits (971), Expect = 2.1e-101
Identity = 277/283 (97.88%), Postives = 277/283 (97.88%), Query Frame = 0 

Query: 44  MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 103
           MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 60

Query: 104 KLTPTVSVCEGCVEVHGGKCEEGRYL---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 163
           KLTPTVSVCEGCVEVHGGKCEEGRYL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEEGRYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMR 223
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMR
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMR 180

Query: 224 ECDVDLESDDDIEYSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDETY 283
           ECDVDLESDDDIE SSARQ TRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDE Y
Sbjct: 181 ECDVDLESDDDIECSSARQGTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDEAY 240

Query: 284 KADLKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 324
           KADLKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR
Sbjct: 241 KADLKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 283

[Close]
BLAST of Carg12777 vs. NCBI nr
Match: XP_022976558.1 (protein BFR2 [Cucurbita maxima])

HSP 1 Score: 361.3 bits (926), Expect = 3.4e-96
Identity = 255/280 (91.07%), Postives = 259/280 (92.50%), Query Frame = 0 

Query: 44  MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 103
           MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 60

Query: 104 KLTPTVSVCEGCVEVHGGKCEEGRYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 163
           KLTPTVSVCEGCVEVH GKC EGRY+      XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  KLTPTVSVCEGCVEVHRGKCGEGRYIERRRDNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMRECD 223
           XXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXGEISTGAGVTSKRMR+CD
Sbjct: 121 XXXXXXXXXXXXXXXXXXQVVPWSCXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMRKCD 180

Query: 224 VDLESDDDIEYSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDETYKAD 283
           VDLESDD IE SSARQSTRPFFNEEATSSSS+RPLKQ+RVTGPTQSPS TT DDE YKAD
Sbjct: 181 VDLESDDGIECSSARQSTRPFFNEEATSSSSYRPLKQSRVTGPTQSPS-TTPDDEAYKAD 240

Query: 284 LKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 324
           LKS SVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR
Sbjct: 241 LKSTSVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 279

[Close]
BLAST of Carg12777 vs. NCBI nr
Match: XP_008454616.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo])

HSP 1 Score: 292.4 bits (747), Expect = 1.9e-75
Identity = 221/280 (78.93%), Postives = 230/280 (82.14%), Query Frame = 0 

Query: 44  MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 103
           MKKCELCG QARMFCESDQANLCWDCDE VHCANFLVAKHSRSLLCH CQSPTPWAASGR
Sbjct: 1   MKKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWAASGR 60

Query: 104 KLTPTVSVCEGCVEVHGGKCEEGRYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 163
           KLTPTVSVCEGCVEVH GKCE+ R             XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  KLTPTVSVCEGCVEVHDGKCEQDR-----RRDNEVEVXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMRECD 223
           XXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXX          SKRMRE  
Sbjct: 121 XXXXXXXXXXXXXXXXXXQVVPWSYAXXXXXXXXXXXXXXXXXXXXXXXXXXSKRMREYG 180

Query: 224 VDLESDDDIEYSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDETYKAD 283
           VDL+SDD+IE  SA QSTRPFFN+EATSSSS RPLKQARV GP QS +T+T DDE  KA+
Sbjct: 181 VDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQS-TTSTPDDEACKAE 240

Query: 284 LKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 324
           LKS +VVRSIQ+LQNR PTDINDASKMIFGICKMSRDQNR
Sbjct: 241 LKSTAVVRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274

[Close]
BLAST of Carg12777 vs. NCBI nr
Match: XP_004146838.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus] >KGN59860.1 hypothetical protein Csa_3G850640 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 2.2e-74
Identity = 213/280 (76.07%), Postives = 224/280 (80.00%), Query Frame = 0 

Query: 44  MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 103
           M KCELCG QARMFCESDQANLCWDCDE VHCANFLVAKHSR+LLCH CQSPTPWAASGR
Sbjct: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60

Query: 104 KLTPTVSVCEGCVEVHGGKCEEGRYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 163
           KLTPTVSVCEGCV+VH GKC++ R                   XXXXXXXXXXXXXXXXX
Sbjct: 61  KLTPTVSVCEGCVQVHDGKCDQER-----RRENEVEVDDGDDFXXXXXXXXXXXXXXXXX 120

Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMRECD 223
           XXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXX          SKRMRE  
Sbjct: 121 XXXXXXXXXXXXXXXXXXQVVPWSYAXXXXXXXXXXXXXXXXXXXXXXXXXASKRMREYG 180

Query: 224 VDLESDDDIEYSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDETYKAD 283
           VDL+SDD+IE  SA QSTRPFFN+EATSSSS RPLKQARVTGPTQS  T+T DDE  KA+
Sbjct: 181 VDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVTGPTQS-ITSTPDDEACKAE 240

Query: 284 LKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 324
           LKS +VVRSIQ+LQNR PTDINDASKMIFGICKMSRDQNR
Sbjct: 241 LKSTAVVRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274

[Close]
BLAST of Carg12777 vs. TAIR10
Match: AT5G54470.1 (B-box type zinc finger family protein)

HSP 1 Score: 118.2 bits (295), Expect = 9.1e-27
Identity = 53/72 (73.61%), Postives = 57/72 (79.17%), Query Frame = 0 

Query: 45  KKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGRK 104
           KKCELC   ARM+CESDQA+LCWDCD  VH ANFLVAKH R LLC ACQS TPW ASG  
Sbjct: 4   KKCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLN 63

Query: 105 LTPTVSVCEGCV 117
           L PTVS+CE C+
Sbjct: 64  LGPTVSICESCL 75

[Close]
BLAST of Carg12777 vs. TAIR10
Match: AT4G27310.1 (B-box type zinc finger family protein)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26
Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 0 

Query: 45  KKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGRK 104
           KKC+LC   ARM+CESDQA+LCWDCD  VH ANFLVAKH+R LLC ACQS TPW A+G +
Sbjct: 3   KKCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGLR 62

Query: 105 LTPTVSVCEGCV 117
           L PT SVCE CV
Sbjct: 63  LGPTFSVCESCV 74

[Close]
BLAST of Carg12777 vs. TAIR10
Match: AT4G15248.1 (B-box type zinc finger family protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-09
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0 

Query: 47 CELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPT 97
          CELCG+ A ++CE+D A LC  CD  VH ANFL  +H R ++C  C+  T
Sbjct: 32 CELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81

[Close]
BLAST of Carg12777 vs. TAIR10
Match: AT3G21890.1 (B-box type zinc finger family protein)

HSP 1 Score: 60.1 bits (144), Expect = 2.9e-09
Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 0 

Query: 46 KCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPT 97
          +CELC   A +FCE+D A LC  CD  VH ANFL  +H R +LC +CQ  T
Sbjct: 30 RCELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80

[Close]
BLAST of Carg12777 vs. TAIR10
Match: AT3G21150.1 (B-box 32)

HSP 1 Score: 58.9 bits (141), Expect = 6.6e-09
Identity = 26/56 (46.43%), Postives = 34/56 (60.71%), Query Frame = 0 

Query: 47  CELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASG 103
           CELCG +A + C +D A LC  CD   H +NFL A+H R ++C  C+S T    SG
Sbjct: 5   CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

[Close]
BLAST of Carg12777 vs. Swiss-Prot
Match: sp|Q1G3I2|MIP1A_ARATH (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.1e-08
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0 

Query: 47 CELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPT 97
          CELCG+ A ++CE+D A LC  CD  VH ANFL  +H R ++C  C+  T
Sbjct: 32 CELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81

[Close]
BLAST of Carg12777 vs. Swiss-Prot
Match: sp|Q9LRM4|MIP1B_ARATH (B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.3e-08
Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 0 

Query: 46 KCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPT 97
          +CELC   A +FCE+D A LC  CD  VH ANFL  +H R +LC +CQ  T
Sbjct: 30 RCELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80

[Close]
BLAST of Carg12777 vs. Swiss-Prot
Match: sp|Q9LJB7|BBX32_ARATH (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-07
Identity = 26/56 (46.43%), Postives = 34/56 (60.71%), Query Frame = 0 

Query: 47  CELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASG 103
           CELCG +A + C +D A LC  CD   H +NFL A+H R ++C  C+S T    SG
Sbjct: 5   CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

[Close]
BLAST of Carg12777 vs. Swiss-Prot
Match: sp|O23379|COL11_ARATH (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 6.5e-06
Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 0 

Query: 46 KCELCG-QQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLL 89
          +C+ CG ++A ++C+SD A LC +CD NVH AN L  +H+RSLL
Sbjct: 4  RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL 47

[Close]
BLAST of Carg12777 vs. Swiss-Prot
Match: sp|Q9LUA9|COL10_ARATH (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.9e-05
Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 0 

Query: 47 CELCGQQARM-FCESDQANLCWDCDENVHCANFLVAKHSRSL 88
          C+ CG+Q  M +C SD A LC  CD NVH AN L  +HSR+L
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTL 46

[Close]
BLAST of Carg12777 vs. TrEMBL
Match: tr|A0A1S3BZT7|A0A1S3BZT7_CUCME (zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103494983 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 221/280 (78.93%), Postives = 230/280 (82.14%), Query Frame = 0 

Query: 44  MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 103
           MKKCELCG QARMFCESDQANLCWDCDE VHCANFLVAKHSRSLLCH CQSPTPWAASGR
Sbjct: 1   MKKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWAASGR 60

Query: 104 KLTPTVSVCEGCVEVHGGKCEEGRYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 163
           KLTPTVSVCEGCVEVH GKCE+ R             XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  KLTPTVSVCEGCVEVHDGKCEQDR-----RRDNEVEVXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMRECD 223
           XXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXX          SKRMRE  
Sbjct: 121 XXXXXXXXXXXXXXXXXXQVVPWSYAXXXXXXXXXXXXXXXXXXXXXXXXXXSKRMREYG 180

Query: 224 VDLESDDDIEYSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDETYKAD 283
           VDL+SDD+IE  SA QSTRPFFN+EATSSSS RPLKQARV GP QS +T+T DDE  KA+
Sbjct: 181 VDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVAGPIQS-TTSTPDDEACKAE 240

Query: 284 LKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 324
           LKS +VVRSIQ+LQNR PTDINDASKMIFGICKMSRDQNR
Sbjct: 241 LKSTAVVRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274

[Close]
BLAST of Carg12777 vs. TrEMBL
Match: tr|A0A0A0LCX6|A0A0A0LCX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G850640 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 213/280 (76.07%), Postives = 224/280 (80.00%), Query Frame = 0 

Query: 44  MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 103
           M KCELCG QARMFCESDQANLCWDCDE VHCANFLVAKHSR+LLCH CQSPTPWAASGR
Sbjct: 1   MIKCELCGHQARMFCESDQANLCWDCDEKVHCANFLVAKHSRTLLCHVCQSPTPWAASGR 60

Query: 104 KLTPTVSVCEGCVEVHGGKCEEGRYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 163
           KLTPTVSVCEGCV+VH GKC++ R                   XXXXXXXXXXXXXXXXX
Sbjct: 61  KLTPTVSVCEGCVQVHDGKCDQER-----RRENEVEVDDGDDFXXXXXXXXXXXXXXXXX 120

Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMRECD 223
           XXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXX          SKRMRE  
Sbjct: 121 XXXXXXXXXXXXXXXXXXQVVPWSYAXXXXXXXXXXXXXXXXXXXXXXXXXASKRMREYG 180

Query: 224 VDLESDDDIEYSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDETYKAD 283
           VDL+SDD+IE  SA QSTRPFFN+EATSSSS RPLKQARVTGPTQS  T+T DDE  KA+
Sbjct: 181 VDLDSDDEIESCSAPQSTRPFFNDEATSSSSLRPLKQARVTGPTQS-ITSTPDDEACKAE 240

Query: 284 LKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 324
           LKS +VVRSIQ+LQNR PTDINDASKMIFGICKMSRDQNR
Sbjct: 241 LKSTAVVRSIQRLQNRLPTDINDASKMIFGICKMSRDQNR 274

[Close]
BLAST of Carg12777 vs. TrEMBL
Match: tr|W9RA56|W9RA56_9ROSA (Putative zinc finger protein CONSTANS-LIKE 11 OS=Morus notabilis OX=981085 GN=L484_002288 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 5.3e-37
Identity = 167/280 (59.64%), Postives = 187/280 (66.79%), Query Frame = 0 

Query: 44  MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 103
           M+ CELCG +ARM CESDQA+LCWDCDE VH ANFLVAKH+RSLLCH C SPTPW ASG 
Sbjct: 1   MRDCELCGLRARMHCESDQASLCWDCDEKVHGANFLVAKHTRSLLCHVCHSPTPWKASGP 60

Query: 104 KLTPTVSVCEGCVEVHGGKCEEGRYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 163
           KLTPTVSVCE CV+ HG + E GR           XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  KLTPTVSVCENCVDCHGRRLERGR---------DEXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMRECD 223
           XXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXX          SKRMRE  
Sbjct: 121 XXXXXXXXXXXXXXXXQVVPWSCXXXXXXXXXXXXXXXXXXXXXXXXXXNSVSKRMRE-K 180

Query: 224 VDLESDDDIEYSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDETYKAD 283
            DLESDD                 EATSS S R +K+ R+    +S      DD      
Sbjct: 181 TDLESDD-----------------EATSSGSFRSVKRPRLGEDYRS---VAQDDHGQTES 240

Query: 284 LKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 324
            +S +++ S+Q+L     TD++DAS  I GICK+SRDQ+R
Sbjct: 241 ARSTAIISSLQRLTKDAITDVHDASATILGICKLSRDQSR 250

[Close]
BLAST of Carg12777 vs. TrEMBL
Match: tr|A0A2K2CBW3|A0A2K2CBW3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G414700v3 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 6.1e-33
Identity = 154/280 (55.00%), Postives = 179/280 (63.93%), Query Frame = 0 

Query: 44  MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 103
           MK CELCG  ARMFCESDQA+LCWDCDE VH ANFLVAKH R+LLC  CQSPTPW +SG 
Sbjct: 1   MKGCELCGSSARMFCESDQASLCWDCDEKVHSANFLVAKHCRTLLCQVCQSPTPWKSSGS 60

Query: 104 KLTPTVSVCEGCVEVHGGKCEEGRYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 163
           KL PTVSVCE C  VH    ++ + L              XXXXXXXXXXXXXXXXXXXX
Sbjct: 61  KLAPTVSVCESCFAVHKNNKKQLQDLNVMASDQESREAGNXXXXXXXXXXXXXXXXXXXX 120

Query: 164 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISTGAGVTSKRMRECD 223
           XXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXX     G     KRMR+ +
Sbjct: 121 XXXXXXXXXXXXVVPWSGLTAXXXXXXXXXXXXXXXXXXXXXXXXXNG---FLKRMRDSN 180

Query: 224 VDLESDDDIEYSSARQ-STRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDETYKA 283
           VDL+SDD+   SS+          EE  S SS RP KQAR +   +       D    +A
Sbjct: 181 VDLDSDDETGCSSSHNLRGGSMSTEEGNSLSSSRPWKQARTSVHVEE------DGHDGQA 240

Query: 284 DLKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQN 323
             +S +++ S+++LQ     +  +AS  I GICK+SRDQ+
Sbjct: 241 MSRSSAIIDSLKRLQKDLVANGENASAAILGICKLSRDQS 271

[Close]
BLAST of Carg12777 vs. TrEMBL
Match: tr|A0A2P5EM91|A0A2P5EM91_9ROSA (B-box-type zinc finger OS=Trema orientalis OX=63057 GN=TorRG33x02_175020 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.0e-32
Identity = 67/84 (79.76%), Postives = 70/84 (83.33%), Query Frame = 0 

Query: 44  MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 103
           MK CELCG +ARM CESDQA+LCWDCDE VH ANFLVAKHSRSLLCH C SPTPW ASG 
Sbjct: 1   MKDCELCGLRARMHCESDQASLCWDCDEKVHGANFLVAKHSRSLLCHVCSSPTPWKASGP 60

Query: 104 KLTPTVSVCEGCVEVHGGKCEEGR 128
           KLTPTVSVCE CV+ HG K E GR
Sbjct: 61  KLTPTVSVCESCVDCHGRKFERGR 84

The following BLAST results are available for this feature:
BLAST of Carg12777 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023535120.11.2e-10198.21protein BFR2-like [Cucurbita pepo subsp. pepo][more]
XP_022936446.12.1e-10197.88protein BFR2 [Cucurbita moschata][more]
XP_022976558.13.4e-9691.07protein BFR2 [Cucurbita maxima][more]
XP_008454616.11.9e-7578.93PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo][more]
XP_004146838.12.2e-7476.07PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus] >KGN59860.1 hyp... [more]
BLAST of Carg12777 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G54470.19.1e-2773.61B-box type zinc finger family protein[more]
AT4G27310.11.2e-2672.22B-box type zinc finger family protein[more]
AT4G15248.11.7e-0950.00B-box type zinc finger family protein[more]
AT3G21890.12.9e-0952.94B-box type zinc finger family protein[more]
AT3G21150.16.6e-0946.43B-box 32[more]
BLAST of Carg12777 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q1G3I2|MIP1A_ARATH3.1e-0850.00B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1[more]
sp|Q9LRM4|MIP1B_ARATH5.3e-0852.94B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1[more]
sp|Q9LJB7|BBX32_ARATH1.2e-0746.43B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1[more]
sp|O23379|COL11_ARATH6.5e-0652.27Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9LUA9|COL10_ARATH1.9e-0554.76Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE... [more]
BLAST of Carg12777 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BZT7|A0A1S3BZT7_CUCME1.3e-7578.93zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103494983 PE=4... [more]
tr|A0A0A0LCX6|A0A0A0LCX6_CUCSA1.4e-7476.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G850640 PE=4 SV=1[more]
tr|W9RA56|W9RA56_9ROSA5.3e-3759.64Putative zinc finger protein CONSTANS-LIKE 11 OS=Morus notabilis OX=981085 GN=L4... [more]
tr|A0A2K2CBW3|A0A2K2CBW3_POPTR6.1e-3355.00Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G414700v3 PE=... [more]
tr|A0A2P5EM91|A0A2P5EM91_9ROSA1.0e-3279.76B-box-type zinc finger OS=Trema orientalis OX=63057 GN=TorRG33x02_175020 PE=4 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12777-RACarg12777-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 42..88
e-value: 2.1E-12
score: 57.2
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 43..85
e-value: 3.0E-6
score: 27.2
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 42..88
score: 9.84
IPR000315B-box-type zinc fingerCDDcd00021BBOXcoord: 46..88
e-value: 6.17785E-7
score: 44.5855
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..181
NoneNo IPR availablePANTHERPTHR31717:SF26B-BOX DOMAIN PROTEIN 28-RELATEDcoord: 29..259
NoneNo IPR availablePANTHERPTHR31717FAMILY NOT NAMEDcoord: 29..259

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12777Cla019449Watermelon (97103) v1carwmB0905
Carg12777Cla007395Watermelon (97103) v1carwmB0906
Carg12777Csa3G850640Cucumber (Chinese Long) v2carcuB0920
Carg12777Csa1G071810Cucumber (Chinese Long) v2carcuB0916
Carg12777MELO3C018174Melon (DHL92) v3.5.1carmeB0891
Carg12777MELO3C002548Melon (DHL92) v3.5.1carmeB0888
Carg12777ClCG05G015130Watermelon (Charleston Gray)carwcgB0885
Carg12777ClCG03G005420Watermelon (Charleston Gray)carwcgB0884
Carg12777CSPI01G11550Wild cucumber (PI 183967)carcpiB0937
Carg12777CSPI03G41790Wild cucumber (PI 183967)carcpiB0941
Carg12777Cucsa.341490Cucumber (Gy14) v1carcgyB1025
Carg12777Cucsa.126190Cucumber (Gy14) v1carcgyB1022
Carg12777CmaCh09G009050Cucurbita maxima (Rimu)carcmaB1240
Carg12777CmaCh18G003360Cucurbita maxima (Rimu)carcmaB1244
Carg12777CmaCh01G011720Cucurbita maxima (Rimu)carcmaB1245
Carg12777CmoCh09G008990Cucurbita moschata (Rifu)carcmoB1211
Carg12777CmoCh01G012260Cucurbita moschata (Rifu)carcmoB1215
Carg12777CmoCh18G003160Cucurbita moschata (Rifu)carcmoB1214
Carg12777Lsi02G006950Bottle gourd (USVL1VR-Ls)carlsiB824
Carg12777Lsi04G012670Bottle gourd (USVL1VR-Ls)carlsiB825
Carg12777Cp4.1LG06g07400Cucurbita pepo (Zucchini)carcpeB1255
Carg12777Cp4.1LG02g01330Cucurbita pepo (Zucchini)carcpeB1254
Carg12777Cp4.1LG09g08720Cucurbita pepo (Zucchini)carcpeB1251
Carg12777CsGy1G011540Cucumber (Gy14) v2carcgybB0889
Carg12777CsGy3G039200Cucumber (Gy14) v2carcgybB0892
Carg12777MELO3C018174.2Melon (DHL92) v3.6.1carmedB0898
Carg12777MELO3C002548.2Melon (DHL92) v3.6.1carmedB0896
Carg12777CsaV3_3G044220Cucumber (Chinese Long) v3carcucB0942
Carg12777CsaV3_1G011690Cucumber (Chinese Long) v3carcucB0939
Carg12777Cla97C03G056720Watermelon (97103) v2carwmbB0947
Carg12777Cla97C05G096260Watermelon (97103) v2carwmbB0948
Carg12777Bhi08G001543Wax gourdcarwgoB1047
Carg12777Bhi09G001664Wax gourdcarwgoB1050
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg12777Carg05668Silver-seed gourdcarcarB641
The following block(s) are covering this gene:
GeneOrganismBlock
Carg12777Watermelon (97103) v2carwmbB0944
Carg12777Cucurbita maxima (Rimu)carcmaB1242
Carg12777Cucurbita maxima (Rimu)carcmaB1243
Carg12777Cucurbita moschata (Rifu)carcmoB1213
Carg12777Wild cucumber (PI 183967)carcpiB0942
Carg12777Cucumber (Chinese Long) v2carcuB0921
Carg12777Bottle gourd (USVL1VR-Ls)carlsiB827