ClCG05G013260 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G013260
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein LENGTH=249
Location	CG_Chr05 : 18689360 .. 18690097 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACCCATCTGAACCCTCTCCCTTTCTTCTTCTCAATCTTCTTTACGATCTATGTTGTTGCTTATTTCCTTTTGTTTCGTAATTGGAGCCCTAAAATCCGGCCGGAAGCTGCGAGTTGCGCGATTTCCTTCGCTCATGGCACCCCCGCCGTGTTCTTAGCCTCCGGCGCCATTCTCGCCGACGCCGGTCGTGGTTTTGCCTCACTCAACACAGATCTTCAAAACGCCGTTCTCGATTACAGCATCGCCTACTTTCTCATGGATCTATTACACTATCTCATCTTCTTCCCTTCAGATTTGCTCTTCATCGCTCATCATTTGGTCACTCTCTTCGTCTTCGTAACTTGCCGTTACCTTGTCTCTCATGGGGCTTATGCGATTCTTGTGCTTCTCATTCTCGCTGAGGTTACCAGCTTTTGCCAGAACGCTTGGACGCTGGCTAGAGCCAGAAGAGCAGATGTTGAGTTCGCTGATAGAGTTTATAATATTCTGTCTCCTCCTTTTTATGTGCTGTATTCGATTGTCAGGGGATTTGTTGGGCCGTACTTTCTTTACAAGATGGGTGAGTTCTTCTTCAATGGGGGAGCTGAGACTGTGATTCCTAAATGGGTTTGGATGTCTTGGATTTTTGTTGTTGCAGTTGCCATTTCTGTGAGTATTTTGTGGATTACCAATCTCTGGGTTGAGTTATACAAAGAAAGGAGCAACAAATTGGAGAAGAAGAAGGCCAGGTAG

mRNA sequence

ATGGAAACCCATCTGAACCCTCTCCCTTTCTTCTTCTCAATCTTCTTTACGATCTATGTTGTTGCTTATTTCCTTTTGTTTCGTAATTGGAGCCCTAAAATCCGGCCGGAAGCTGCGAGTTGCGCGATTTCCTTCGCTCATGGCACCCCCGCCGTGTTCTTAGCCTCCGGCGCCATTCTCGCCGACGCCGGTCGTGGTTTTGCCTCACTCAACACAGATCTTCAAAACGCCGTTCTCGATTACAGCATCGCCTACTTTCTCATGGATCTATTACACTATCTCATCTTCTTCCCTTCAGATTTGCTCTTCATCGCTCATCATTTGGTCACTCTCTTCGTCTTCGTAACTTGCCGTTACCTTGTCTCTCATGGGGCTTATGCGATTCTTGTGCTTCTCATTCTCGCTGAGGTTACCAGCTTTTGCCAGAACGCTTGGACGCTGGCTAGAGCCAGAAGAGCAGATGTTGAGTTCGCTGATAGAGTTTATAATATTCTGTCTCCTCCTTTTTATGTGCTGTATTCGATTGTCAGGGGATTTGTTGGGCCGTACTTTCTTTACAAGATGGGTGAGTTCTTCTTCAATGGGGGAGCTGAGACTGTGATTCCTAAATGGGTTTGGATGTCTTGGATTTTTGTTGTTGCAGTTGCCATTTCTGTGAGTATTTTGTGGATTACCAATCTCTGGGTTGAGTTATACAAAGAAAGGAGCAACAAATTGGAGAAGAAGAAGGCCAGGTAG

Coding sequence (CDS)

ATGGAAACCCATCTGAACCCTCTCCCTTTCTTCTTCTCAATCTTCTTTACGATCTATGTTGTTGCTTATTTCCTTTTGTTTCGTAATTGGAGCCCTAAAATCCGGCCGGAAGCTGCGAGTTGCGCGATTTCCTTCGCTCATGGCACCCCCGCCGTGTTCTTAGCCTCCGGCGCCATTCTCGCCGACGCCGGTCGTGGTTTTGCCTCACTCAACACAGATCTTCAAAACGCCGTTCTCGATTACAGCATCGCCTACTTTCTCATGGATCTATTACACTATCTCATCTTCTTCCCTTCAGATTTGCTCTTCATCGCTCATCATTTGGTCACTCTCTTCGTCTTCGTAACTTGCCGTTACCTTGTCTCTCATGGGGCTTATGCGATTCTTGTGCTTCTCATTCTCGCTGAGGTTACCAGCTTTTGCCAGAACGCTTGGACGCTGGCTAGAGCCAGAAGAGCAGATGTTGAGTTCGCTGATAGAGTTTATAATATTCTGTCTCCTCCTTTTTATGTGCTGTATTCGATTGTCAGGGGATTTGTTGGGCCGTACTTTCTTTACAAGATGGGTGAGTTCTTCTTCAATGGGGGAGCTGAGACTGTGATTCCTAAATGGGTTTGGATGTCTTGGATTTTTGTTGTTGCAGTTGCCATTTCTGTGAGTATTTTGTGGATTACCAATCTCTGGGTTGAGTTATACAAAGAAAGGAGCAACAAATTGGAGAAGAAGAAGGCCAGGTAG

Protein sequence

METHLNPLPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILADAGRGFASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYLVSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFVGPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNKLEKKKAR

Homology

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BLAST of ClCG05G013260 vs. TrEMBL
Match: A0A0A0L8C3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G589580 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 1.2e-131
Identity = 232/242 (95.87%), Postives = 237/242 (97.93%), Query Frame = 1


Query: 1   METHLNPLPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIYV+AYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL
Sbjct: 1   METHLNPLPFFFSIFFTIYVIAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60

Query: 61  ADAGRGFASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           +DAGRGFAS N+DLQN VLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  SDAGRGFASPNSDLQNLVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VSHGAYAILVLLILAEVTSFCQN WTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV
Sbjct: 121 VSHGAYAILVLLILAEVTSFCQNVWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNKLE 240
           GPYFLYKMGEFFFNGGAETVIP WVWMSWIFVVA AISVSILWITNLWVELY+ERS+KLE
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPTWVWMSWIFVVAAAISVSILWITNLWVELYRERSSKLE 240

Query: 241 KK 243
           KK
Sbjct: 241 KK 242

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BLAST of ClCG05G013260 vs. TrEMBL
Match: M5X6A3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010530mg PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.6e-96
Identity = 171/245 (69.80%), Postives = 203/245 (82.86%), Query Frame = 1


Query: 1   METHLNPLP---FFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASG 60
           MET  NP+P    FF +FF +Y++AYF++FR WSPKIRPEA+SC IS AHGTPAVFL++ 
Sbjct: 1   METQ-NPIPCLLIFFPMFFVVYLIAYFIVFRTWSPKIRPEASSCLISLAHGTPAVFLSTY 60

Query: 61  AILADAGRGFASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTC 120
           AILA    GFAS NT  QN VLDYS+AYFL DLLHY++FFPSD+LFI HHL TLFVF+TC
Sbjct: 61  AILAYPATGFASQNTRFQNTVLDYSVAYFLTDLLHYIVFFPSDVLFIGHHLATLFVFLTC 120

Query: 121 RYLVSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVR 180
           RY+ SHGA+AIL LLILAEVTS CQN WTLA ARR D+EFA +VY++LSPPFYVLYSIVR
Sbjct: 121 RYVASHGAFAILSLLILAEVTSLCQNVWTLANARRRDLEFAAKVYDLLSPPFYVLYSIVR 180

Query: 181 GFVGPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSN 240
           G VGPYF+Y+MG F+  G A+ +IP+WVW+SWI VV  AISVSILWI+NLWVEL++ R+ 
Sbjct: 181 GLVGPYFVYRMGAFYVGGEADGLIPRWVWVSWIVVVMSAISVSILWISNLWVELFRARTG 240

Query: 241 KLEKK 243
            LEKK
Sbjct: 241 NLEKK 244

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BLAST of ClCG05G013260 vs. TrEMBL
Match: A0A164VUJ4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021760 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.1e-96
Identity = 168/238 (70.59%), Postives = 201/238 (84.45%), Query Frame = 1


Query: 5   LNPLPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILADAG 64
           L  L FFF+++F IY+ A+F++FR WS K+RPEAASC IS+AHGTPAVFLA  AI++D  
Sbjct: 8   LQNLIFFFTLYFAIYLTAHFIVFRKWSSKLRPEAASCLISYAHGTPAVFLAIAAIISDPN 67

Query: 65  RGFASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYLVSHG 124
           RGFAS+NT  Q  VLDYS+AYFLMDL HYLIF+PSD+LFIAHHL TLFVF+TCR+LV HG
Sbjct: 68  RGFASVNTYFQTLVLDYSVAYFLMDLTHYLIFYPSDVLFIAHHLATLFVFMTCRFLVFHG 127

Query: 125 AYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFVGPYF 184
           AYAIL+LLI+AEVTSFCQN WTLA AR+ D +FA +V+ +LSPPFYVLYS+VRGFVGP+F
Sbjct: 128 AYAILMLLIIAEVTSFCQNTWTLACARKGDSKFAYKVFGLLSPPFYVLYSVVRGFVGPWF 187

Query: 185 LYKMGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNKLEKK 243
           LY+MG+F+ +G A   IP WVW SWI VV +AI VSILWI NLWVELY+ER+ KLEKK
Sbjct: 188 LYEMGKFYASGAASNAIPTWVWGSWILVVLMAIVVSILWIMNLWVELYRERNGKLEKK 245

[Close]

BLAST of ClCG05G013260 vs. TrEMBL
Match: B9GJB8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s36350g PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.7e-96
Identity = 168/238 (70.59%), Postives = 199/238 (83.61%), Query Frame = 1


Query: 5   LNPLPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILADAG 64
           L  LP  F+ F TIY+ A+FL+FRNWSPKIRPEAASC IS  HGTPAVFLA+ A+  +  
Sbjct: 8   LPDLPILFAFFLTIYLAAHFLVFRNWSPKIRPEAASCLISIFHGTPAVFLATHALFTNPN 67

Query: 65  RGFASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYLVSHG 124
           RGF+SLNT  + +VLDYSI+YFLMDL+HYLIF PSD+LFI HHL TLFVFVTCRYLV+ G
Sbjct: 68  RGFSSLNTKTEASVLDYSISYFLMDLIHYLIFSPSDILFIGHHLATLFVFVTCRYLVARG 127

Query: 125 AYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFVGPYF 184
           AYA+L+LLILAEVTS CQNAWTLA ARR DVEFA +VY+ LS PFY  YS+VRG +GPYF
Sbjct: 128 AYAVLMLLILAEVTSACQNAWTLANARRIDVEFAAKVYDFLSLPFYAFYSVVRGILGPYF 187

Query: 185 LYKMGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNKLEKK 243
           +Y+MG FF +G    +IPKW+W+SW+FVV +AISVSILW+TNLWV+LY+ERS KLEKK
Sbjct: 188 VYQMGAFFISGVDGGIIPKWIWVSWLFVVVIAISVSILWVTNLWVQLYRERSAKLEKK 245

[Close]

BLAST of ClCG05G013260 vs. TrEMBL
Match: A0A067LCX5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10171 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.7e-96
Identity = 167/235 (71.06%), Postives = 199/235 (84.68%), Query Frame = 1


Query: 8   LPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILADAGRGF 67
           LP FFS F  IY++AYF++FRNW+ K+R EA+SC IS  HGTPAVFLAS AI AD+ RGF
Sbjct: 11  LPLFFSFFLFIYLLAYFVVFRNWTSKVRSEASSCLISLCHGTPAVFLASYAIFADSNRGF 70

Query: 68  ASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYLVSHGAYA 127
           +S NT +Q+AVLDYSIAYFLMDL+HY+IF+PSD+LFI HHL TLFVF+TCRY+VSHGAYA
Sbjct: 71  SSPNTIIQDAVLDYSIAYFLMDLIHYVIFYPSDVLFIGHHLATLFVFMTCRYVVSHGAYA 130

Query: 128 ILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFVGPYFLYK 187
           IL LLILAEVTS CQN WTLA ARR DV+FA +VY+ LSPPFY  YS+VRG +GPYF+Y+
Sbjct: 131 ILWLLILAEVTSLCQNTWTLAGARRTDVKFASKVYDFLSPPFYAFYSLVRGLLGPYFVYQ 190

Query: 188 MGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNKLEKK 243
           MG F+ +G A+ VIPKWVW+SW+ VV  AISVSILWITNLWVELY+ + +K EKK
Sbjct: 191 MGAFYISGVADRVIPKWVWISWMIVVTTAISVSILWITNLWVELYRAKKSKCEKK 245

[Close]

BLAST of ClCG05G013260 vs. TAIR10
Match: AT5G14280.1 (AT5G14280.1 DNA-binding storekeeper protein-related)

HSP 1 Score: 315.8 bits (808), Expect = 2.3e-86
Identity = 152/245 (62.04%), Postives = 186/245 (75.92%), Query Frame = 1


Query: 2   ETHLNPLPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILA 61
           E  +  LP FFS+F TIY++AYF++FRNW P+IRPEA+SC IS  HG+PAVFLA+ A+ +
Sbjct: 325 EISIPDLPIFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFS 384

Query: 62  DAGRGFASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYLV 121
            + R FAS NT  QN VLD+S+AYFL DL HY++F P+D+LFI HH+ TLFVF+TCR+LV
Sbjct: 385 SSERSFASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLV 444

Query: 122 SHGAYAILVLLILAEVTSFCQNAWTLARARRADVE--FADRVYNILSPPFYVLYSIVRGF 181
            HGA AIL LLILAEVTS CQNAWTLA AR+ D E   A +VY++LSPPFY  YSIVRG 
Sbjct: 445 FHGACAILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGV 504

Query: 182 VGPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKER-SNK 241
           +GP F  KM  F+  GGA  VIP W+W+SW  VV +AI+VSILWI NLW+EL+ ER +NK
Sbjct: 505 LGPLFFGKMVAFYARGGAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKANK 564

Query: 242 LEKKK 244
           +   K
Sbjct: 565 IRVDK 569

[Close]

BLAST of ClCG05G013260 vs. TAIR10
Match: AT3G27270.1 (AT3G27270.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-71
Identity = 127/244 (52.05%), Postives = 167/244 (68.44%), Query Frame = 1


Query: 3   THLNPLPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILAD 62
           T+   LP FFSIF  +Y++ Y  +F+ W+P+ RP A+SC IS  HG  AV LA+ A+L+D
Sbjct: 5   TYSKDLPLFFSIFIFVYLLGYLFIFKKWTPETRPLASSCLISLLHGVSAVVLATNALLSD 64

Query: 63  AGRGFASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPS----DLLFIAHHLVTLFVFVTCR 122
             RGF+S+NT  QN++LD+S AYFL DL+H L  FPS    D LF AHHL  LFVF+TCR
Sbjct: 65  PNRGFSSVNTQSQNSILDFSSAYFLADLVH-LAVFPSPAGGDSLFAAHHLAVLFVFLTCR 124

Query: 123 YLVSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRG 182
           Y+V+HGA A+L LL++AE TS CQN WTLA AR  D   A  ++  ++ PFY  YS+ R 
Sbjct: 125 YMVAHGACALLALLVVAEATSACQNTWTLADARGKDAPLAVSLHRFVTVPFYASYSVCRC 184

Query: 183 FVGPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNK 242
            + P  + KM  F+ +GGA+ VIP+WVW+SW  V+  A++VSILWI NLWV  ++ER +K
Sbjct: 185 VLAPLLIVKMTWFYVSGGADDVIPRWVWVSWTVVIVTAVTVSILWIWNLWVLFFQERYSK 244

[Close]

BLAST of ClCG05G013260 vs. TAIR10
Match: AT3G25950.1 (AT3G25950.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 252.3 bits (643), Expect = 3.1e-67
Identity = 119/242 (49.17%), Postives = 160/242 (66.12%), Query Frame = 1


Query: 5   LNPLPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL---- 64
           L   P F  +F  +Y + YFL+FR W        ASC +S  HGTPAV +AS A+L    
Sbjct: 12  LATFPSFLLLFLAVYTIGYFLVFRTWKQSSHL-GASCLMSLFHGTPAVIMASHALLTTPR 71

Query: 65  ADAGRGFASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 124
           AD    FAS NT +++ VLD+S+AYF +DLLHYLIF P+D +FI HH+ TL+VF TCR+ 
Sbjct: 72  ADV-HSFASPNTAVESNVLDFSMAYFTVDLLHYLIFLPNDFIFILHHIATLYVFATCRFA 131

Query: 125 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 184
           V HGA+ +L+LLILAE TS CQN WT+   R+ DV  A RV  +LSPPFY+ Y++VRG  
Sbjct: 132 VGHGAHGLLLLLILAEATSACQNVWTITGYRKNDVALARRVRELLSPPFYLFYTVVRGLA 191

Query: 185 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNKLE 243
           GP  LY M  F+ +G A+ V+P+W W+SW+ V+  AI VSILW+   W++ ++E ++  +
Sbjct: 192 GPVVLYDMATFYGSGAADGVVPRWAWLSWLVVIGFAILVSILWVLRNWLDWFRENNSSKK 251

[Close]

BLAST of ClCG05G013260 vs. NCBI nr
Match: gi|659098287|ref|XP_008450065.1| (PREDICTED: uncharacterized protein LOC103491768 [Cucumis melo])

HSP 1 Score: 478.0 bits (1229), Expect = 9.8e-132
Identity = 230/245 (93.88%), Postives = 239/245 (97.55%), Query Frame = 1


Query: 1   METHLNPLPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIY++AYFLLFRNWSPK+RPEAASCAISFAHGTPAVFLASGAIL
Sbjct: 1   METHLNPLPFFFSIFFTIYIIAYFLLFRNWSPKVRPEAASCAISFAHGTPAVFLASGAIL 60

Query: 61  ADAGRGFASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           +DAGRGFAS N+DLQN VLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  SDAGRGFASPNSDLQNVVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VS+GAYAILVLLILAEVTSFCQN WTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV
Sbjct: 121 VSYGAYAILVLLILAEVTSFCQNVWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNKLE 240
           GPYFLYKMGEFFFNGGAETVIP WVWMSWIFVVA AISVSILWITNLW+ELY+ERS+KLE
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPTWVWMSWIFVVAAAISVSILWITNLWIELYRERSSKLE 240

Query: 241 KKKAR 246
           KKK R
Sbjct: 241 KKKGR 245

[Close]

BLAST of ClCG05G013260 vs. NCBI nr
Match: gi|449455958|ref|XP_004145717.1| (PREDICTED: uncharacterized protein LOC101208807 [Cucumis sativus])

HSP 1 Score: 477.2 bits (1227), Expect = 1.7e-131
Identity = 232/242 (95.87%), Postives = 237/242 (97.93%), Query Frame = 1


Query: 1   METHLNPLPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60
           METHLNPLPFFFSIFFTIYV+AYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL
Sbjct: 1   METHLNPLPFFFSIFFTIYVIAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAIL 60

Query: 61  ADAGRGFASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 120
           +DAGRGFAS N+DLQN VLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL
Sbjct: 61  SDAGRGFASPNSDLQNLVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYL 120

Query: 121 VSHGAYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180
           VSHGAYAILVLLILAEVTSFCQN WTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV
Sbjct: 121 VSHGAYAILVLLILAEVTSFCQNVWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFV 180

Query: 181 GPYFLYKMGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNKLE 240
           GPYFLYKMGEFFFNGGAETVIP WVWMSWIFVVA AISVSILWITNLWVELY+ERS+KLE
Sbjct: 181 GPYFLYKMGEFFFNGGAETVIPTWVWMSWIFVVAAAISVSILWITNLWVELYRERSSKLE 240

Query: 241 KK 243
           KK
Sbjct: 241 KK 242

[Close]

BLAST of ClCG05G013260 vs. NCBI nr
Match: gi|1009124152|ref|XP_015878912.1| (PREDICTED: uncharacterized protein LOC107415143 [Ziziphus jujuba])

HSP 1 Score: 382.9 bits (982), Expect = 4.3e-103
Identity = 178/235 (75.74%), Postives = 207/235 (88.09%), Query Frame = 1


Query: 8   LPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILADAGRGF 67
           LP FF +FF IY++AYF++FR+WSPK+RPEA+SC+ISFAHGTPAVFLAS AILA+  RGF
Sbjct: 12  LPLFFCMFFVIYLIAYFIVFRSWSPKLRPEASSCSISFAHGTPAVFLASYAILAEPSRGF 71

Query: 68  ASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYLVSHGAYA 127
           AS N+  QN VLDYSIAYFLMDLLHY++F PSD+LFI HHL TLFVF+TCRYLVSHGA++
Sbjct: 72  ASSNSQFQNLVLDYSIAYFLMDLLHYVVFVPSDVLFIGHHLATLFVFITCRYLVSHGAFS 131

Query: 128 ILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFVGPYFLYK 187
           ILVLLILAEVTSFCQNAWTLA AR+ DV FA  +Y+ LSPPFYVLYSI RGFVGPYF+Y+
Sbjct: 132 ILVLLILAEVTSFCQNAWTLANARKHDVVFAANLYDFLSPPFYVLYSIARGFVGPYFVYE 191

Query: 188 MGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNKLEKK 243
           MG F+ +G A+ VIPKWVW+SW+FVV  AISVSILWI+NLWVELY+ RS KLEKK
Sbjct: 192 MGLFYMSGKADNVIPKWVWVSWLFVVVTAISVSILWISNLWVELYRNRSGKLEKK 246

[Close]

BLAST of ClCG05G013260 vs. NCBI nr
Match: gi|764612725|ref|XP_004305930.2| (PREDICTED: transmembrane protein 136 [Fragaria vesca subsp. vesca])

HSP 1 Score: 366.3 bits (939), Expect = 4.1e-98
Identity = 170/238 (71.43%), Postives = 202/238 (84.87%), Query Frame = 1


Query: 5   LNPLPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILADAG 64
           L PLP  FS FFTIY++AYF++FR WSPKIRPEA+SC IS AHGTPAVF +S A+L+D  
Sbjct: 36  LPPLPILFSFFFTIYLIAYFIVFRTWSPKIRPEASSCLISLAHGTPAVFFSSYALLSDPS 95

Query: 65  RGFASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYLVSHG 124
            GFA+ NT LQN+VL++S+AYFLMDLLHYLIFFP D+LFI HHL TLFVF+TCRY+ S G
Sbjct: 96  TGFAAANTRLQNSVLEFSVAYFLMDLLHYLIFFPGDVLFIGHHLATLFVFLTCRYVASRG 155

Query: 125 AYAILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFVGPYF 184
           A A+L LLILAEVTS CQN WTLA ARR +VEFA +VY+ LSPPFYVLYSIVRGFVGPYF
Sbjct: 156 ALAVLGLLILAEVTSLCQNVWTLANARRREVEFAAKVYDFLSPPFYVLYSIVRGFVGPYF 215

Query: 185 LYKMGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNKLEKK 243
           +Y+M  F+ +G AE +IP+WVW+SWI VV  AISVSI+WI+NLWVEL+++RS KLEKK
Sbjct: 216 VYRMTAFYASGAAEGLIPRWVWLSWIVVVVAAISVSIMWISNLWVELFRDRSGKLEKK 273

[Close]

BLAST of ClCG05G013260 vs. NCBI nr
Match: gi|694392441|ref|XP_009371696.1| (PREDICTED: transmembrane protein 136-like isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 361.7 bits (927), Expect = 1.0e-96
Identity = 166/235 (70.64%), Postives = 202/235 (85.96%), Query Frame = 1


Query: 8   LPFFFSIFFTIYVVAYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILADAGRGF 67
           LP FF +F  +YV+AYF++FR WSPKIRPEA+SC IS AHGTPAVFL++ AIL+D   GF
Sbjct: 26  LPIFFLMFSIVYVIAYFIVFRTWSPKIRPEASSCLISLAHGTPAVFLSAYAILSDPATGF 85

Query: 68  ASLNTDLQNAVLDYSIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYLVSHGAYA 127
           A+ NT  QN+VLDYS+AYFL DLLHYL+FFPSD+LFI HHL TLFVF+TCRY+ SHGA+A
Sbjct: 86  AAPNTLFQNSVLDYSVAYFLTDLLHYLVFFPSDVLFIGHHLATLFVFLTCRYVASHGAFA 145

Query: 128 ILVLLILAEVTSFCQNAWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFVGPYFLYK 187
           IL LLILAEVTS CQN WTLA ARR+D++FA +VY++LSPPFY+LYSIVRGFVGPYF+Y+
Sbjct: 146 ILCLLILAEVTSLCQNVWTLANARRSDLKFAAKVYDLLSPPFYILYSIVRGFVGPYFVYR 205

Query: 188 MGEFFFNGGAETVIPKWVWMSWIFVVAVAISVSILWITNLWVELYKERSNKLEKK 243
           MG F+ +G A+ +IP+WVW SWI VV  AISVSILWI+NLWVEL++ R+ +LEKK
Sbjct: 206 MGAFYISGAADGLIPRWVWGSWIVVVMAAISVSILWISNLWVELFRARTGELEKK 260

The following BLAST results are available for this feature:

BLAST of ClCG05G013260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8C3_CUCSA	1.2e-131	95.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G589580 PE=4 SV=1	[more]
M5X6A3_PRUPE	1.6e-96	69.80	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010530mg PE=4 SV=1	[more]
A0A164VUJ4_DAUCA	2.1e-96	70.59	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021760 PE=4 SV=1	[more]
B9GJB8_POPTR	2.7e-96	70.59	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s36350g PE=4 SV=1	[more]
A0A067LCX5_JATCU	2.7e-96	71.06	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10171 PE=4 SV=1	[more]

BLAST of ClCG05G013260 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G14280.1	2.3e-86	62.04	DNA-binding storekeeper protein-related	[more]
AT3G27270.1	1.6e-71	52.05	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT3G25950.1	3.1e-67	49.17	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

BLAST of ClCG05G013260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098287\|ref\|XP_008450065.1\|	9.8e-132	93.88	PREDICTED: uncharacterized protein LOC103491768 [Cucumis melo]	[more]
gi\|449455958\|ref\|XP_004145717.1\|	1.7e-131	95.87	PREDICTED: uncharacterized protein LOC101208807 [Cucumis sativus]	[more]
gi\|1009124152\|ref\|XP_015878912.1\|	4.3e-103	75.74	PREDICTED: uncharacterized protein LOC107415143 [Ziziphus jujuba]	[more]
gi\|764612725\|ref\|XP_004305930.2\|	4.1e-98	71.43	PREDICTED: transmembrane protein 136 [Fragaria vesca subsp. vesca]	[more]
gi\|694392441\|ref\|XP_009371696.1\|	1.0e-96	70.64	PREDICTED: transmembrane protein 136-like isoform X1 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006634	TLC-dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G013260.1	ClCG05G013260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 33..236 score: 1.4
IPR006634	TRAM/LAG1/CLN8 homology domain	PROFILE	PS50922	TLC	coord: 33..236 score: 9
None	No IPR available	PANTHER	PTHR31766	FAMILY NOT NAMED	coord: 8..245 score: 5.9E
None	No IPR available	PANTHER	PTHR31766:SF2	DNA-BINDING STOREKEEPER PROTEIN-LIKE PROTEIN-RELATED	coord: 8..245 score: 5.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G013260	Csa3G589580	Cucumber (Chinese Long) v2	cuwcgB232
ClCG05G013260	MELO3C014858	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G013260	Cla004046	Watermelon (97103) v1	wcgwmB285
ClCG05G013260	Cla97C05G094820	Watermelon (97103) v2	wcgwmbB229
ClCG05G013260	Bhi01G001587	Wax gourd	wcgwgoB429
ClCG05G013260	CSPI03G25750	Wild cucumber (PI 183967)	cpiwcgB239
ClCG05G013260	Cucsa.156390	Cucumber (Gy14) v1	cgywcgB261
ClCG05G013260	CmaCh11G014850	Cucurbita maxima (Rimu)	cmawcgB120
ClCG05G013260	CmaCh14G007000	Cucurbita maxima (Rimu)	cmawcgB231
ClCG05G013260	CmoCh14G007180	Cucurbita moschata (Rifu)	cmowcgB215
ClCG05G013260	CmoCh11G016360	Cucurbita moschata (Rifu)	cmowcgB112
ClCG05G013260	Lsi07G014590	Bottle gourd (USVL1VR-Ls)	lsiwcgB400
ClCG05G013260	Cp4.1LG03g07020	Cucurbita pepo (Zucchini)	cpewcgB555
ClCG05G013260	Cp4.1LG04g05770	Cucurbita pepo (Zucchini)	cpewcgB613
ClCG05G013260	CsGy3G024160	Cucumber (Gy14) v2	cgybwcgB216
ClCG05G013260	MELO3C014858.2	Melon (DHL92) v3.6.1	medwcgB425
ClCG05G013260	Carg09678	Silver-seed gourd	carwcgB0428
ClCG05G013260	Carg15578	Silver-seed gourd	carwcgB0361
ClCG05G013260	CsaV3_3G027280	Cucumber (Chinese Long) v3	cucwcgB240

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G013260	Melon (DHL92) v3.5.1	mewcgB252
ClCG05G013260	Watermelon (97103) v1	wcgwmB310
ClCG05G013260	Cucurbita pepo (Zucchini)	cpewcgB332
ClCG05G013260	Bottle gourd (USVL1VR-Ls)	lsiwcgB369
ClCG05G013260	Cucumber (Gy14) v2	cgybwcgB062
ClCG05G013260	Melon (DHL92) v3.6.1	medwcgB244
ClCG05G013260	Cucumber (Chinese Long) v3	cucwcgB072
ClCG05G013260	Watermelon (97103) v2	wcgwmbB236
ClCG05G013260	Watermelon (Charleston Gray)	wcgwcgB157
ClCG05G013260	Wild cucumber (PI 183967)	cpiwcgB068
ClCG05G013260	Cucumber (Chinese Long) v2	cuwcgB065