ClCG05G007590 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G007590
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionMitochondrial metalloendopeptidase OMA1
LocationCG_Chr05 : 8024913 .. 8025463 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTAGATTACACCGGTTTGCTTTTGATTGCGTCTGCTGGATACGACCCTAGGAATGCACCGACAGTATGCGAGAAGTTGGGTAAGATCTCCGGTGAGTCTCACCTGAGTGATTATCTTTGTACTCATCCATCTGGAAAGAAGTGAGTTGAGTTGGTAGCTCAAGCAAAGGTTATGGAGGAAGCAGTTACTGCTTACAGAGAAGTAAGACCGTACCGGACGTGGGGTTGAAAATGAAAGCGCCCTATAAGACTCTTAAAACTACCTTTAGAAACTCAAAGTGAGGTGATACTGATTAGCAAGAGAAAGGTCTCCCTCATATATTGTATTAATATTAAAGCATGATCATCTTACTGACTTTTTGGTCGTTAATTTGGGTTCACGAGAGGGTGATAAACCATCCTTTGGTTGGTGGTTTTTCTTTGGCATAGCTCTACCCTGTTTCACCATAAGAAATGTTTATGTTGGAGGCTATTGATATCATGAGCAACTTGGGTGCATGATTGAAACTTGTTTATTTTGTTAACATCAGGTCTGCCTTGCTGCAC

mRNA sequence

ATGGAAGTAGATTACACCGGTTTGCTTTTGATTGCGTCTGCTGGATACGACCCTAGGAATGCACCGACAGTATGCGAGAAGTTGGGTAAGATCTCCGGTGAGTCTCACCTGAGTGATTATCTTTGTACTCATCCATCTGGAAAGAAGTCTGCCTTGCTGCAC

Coding sequence (CDS)

ATGGAAGTAGATTACACCGGTTTGCTTTTGATTGCGTCTGCTGGATACGACCCTAGGAATGCACCGACAGTATGCGAGAAGTTGGGTAAGATCTCCGGTGAGTCTCACCTGAGTGATTATCTTTGTACTCATCCATCTGGAAAGAAGTCTGCCTTGCTGCAC

Protein sequence

MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALLH
Homology
[Close]
BLAST of ClCG05G007590 vs. TrEMBL
Match: M5XRL4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005730mg PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.8e-13
Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1   MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALL 54
           +E D+ GLLL+ASAGYDPR APTV EKLGKISGES L DYL THPSGKK A L
Sbjct: 367 IEADHIGLLLVASAGYDPRVAPTVYEKLGKISGESALRDYLSTHPSGKKRAQL 419

[Close]
BLAST of ClCG05G007590 vs. TrEMBL
Match: A0A0V0IEA5_SOLCH (Putative mitochondrial metalloendopeptidase OMA1-like OS=Solanum chacoense PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.1e-13
Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1   MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALL 54
           ME DY GLLL+ASAGY+PR AP+V EKLGKISGES L DYL THPSGKK A L
Sbjct: 358 MEADYIGLLLMASAGYNPRIAPSVYEKLGKISGESALRDYLSTHPSGKKRAQL 410

[Close]
BLAST of ClCG05G007590 vs. TrEMBL
Match: M1D270_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031017 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.1e-13
Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1   MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALL 54
           ME DY GLLL+ASAGY+PR AP+V EKLGKISGES L DYL THPSGKK A L
Sbjct: 358 MEADYIGLLLMASAGYNPRIAPSVYEKLGKISGESALRDYLSTHPSGKKRAQL 410

[Close]
BLAST of ClCG05G007590 vs. TrEMBL
Match: W9S9F8_9ROSA (Mitochondrial metalloendopeptidase OMA1 OS=Morus notabilis GN=L484_012957 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.1e-13
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 1 

Query: 1   MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALL 54
           ME DY GLLLIASAGYDPR AP V EKLGK++G+S L DYL THPSGKK A L
Sbjct: 368 MEADYIGLLLIASAGYDPRVAPKVYEKLGKVTGDSKLRDYLSTHPSGKKRAQL 420

[Close]
BLAST of ClCG05G007590 vs. TrEMBL
Match: K4BEC3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.1e-13
Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1   MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALL 54
           ME DY GLLL+ASAGY+PR AP+V EKLGKISGES L DYL THPSGKK A L
Sbjct: 321 MEADYIGLLLMASAGYNPRIAPSVYEKLGKISGESALRDYLSTHPSGKKRAQL 373

[Close]
BLAST of ClCG05G007590 vs. TAIR10
Match: AT5G51740.1 (AT5G51740.1 Peptidase family M48 family protein)

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-14
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 1 

Query: 1   MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALL 54
           +E DY GLLL+ASAGYDPR APTV EKLGK+ G++ L DYL THPSGKK + L
Sbjct: 363 IEADYIGLLLLASAGYDPRVAPTVYEKLGKLGGDA-LGDYLSTHPSGKKRSKL 414

[Close]
BLAST of ClCG05G007590 vs. NCBI nr
Match: gi|645257270|ref|XP_008234337.1| (PREDICTED: uncharacterized protein LOC103333298 [Prunus mume])

HSP 1 Score: 82.4 bits (202), Expect = 2.6e-13
Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1   MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALL 54
           +E D+ GLLL+ASAGYDPR APTV EKLGKISGES L DYL THPSGKK A L
Sbjct: 348 IEADHIGLLLVASAGYDPRVAPTVYEKLGKISGESALRDYLSTHPSGKKRAQL 400

[Close]
BLAST of ClCG05G007590 vs. NCBI nr
Match: gi|596049181|ref|XP_007220466.1| (hypothetical protein PRUPE_ppa005730mg [Prunus persica])

HSP 1 Score: 82.4 bits (202), Expect = 2.6e-13
Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1   MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALL 54
           +E D+ GLLL+ASAGYDPR APTV EKLGKISGES L DYL THPSGKK A L
Sbjct: 367 IEADHIGLLLVASAGYDPRVAPTVYEKLGKISGESALRDYLSTHPSGKKRAQL 419

[Close]
BLAST of ClCG05G007590 vs. NCBI nr
Match: gi|970019872|ref|XP_015071140.1| (PREDICTED: uncharacterized protein LOC107015401 [Solanum pennellii])

HSP 1 Score: 81.6 bits (200), Expect = 4.5e-13
Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1   MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALL 54
           ME DY GLLL+ASAGY+PR AP+V EKLGKISGES L DYL THPSGKK A L
Sbjct: 358 MEADYIGLLLMASAGYNPRIAPSVYEKLGKISGESALRDYLSTHPSGKKRAQL 410

[Close]
BLAST of ClCG05G007590 vs. NCBI nr
Match: gi|703147520|ref|XP_010109081.1| (Mitochondrial metalloendopeptidase OMA1 [Morus notabilis])

HSP 1 Score: 81.6 bits (200), Expect = 4.5e-13
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 1 

Query: 1   MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALL 54
           ME DY GLLLIASAGYDPR AP V EKLGK++G+S L DYL THPSGKK A L
Sbjct: 368 MEADYIGLLLIASAGYDPRVAPKVYEKLGKVTGDSKLRDYLSTHPSGKKRAQL 420

[Close]
BLAST of ClCG05G007590 vs. NCBI nr
Match: gi|565362624|ref|XP_006348046.1| (PREDICTED: uncharacterized protein LOC102601487 [Solanum tuberosum])

HSP 1 Score: 81.6 bits (200), Expect = 4.5e-13
Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1   MEVDYTGLLLIASAGYDPRNAPTVCEKLGKISGESHLSDYLCTHPSGKKSALL 54
           ME DY GLLL+ASAGY+PR AP+V EKLGKISGES L DYL THPSGKK A L
Sbjct: 358 MEADYIGLLLMASAGYNPRIAPSVYEKLGKISGESALRDYLSTHPSGKKRAQL 410

The following BLAST results are available for this feature:
BLAST of ClCG05G007590 vs. TrEMBL
Match NameE-valueIdentityDescription
M5XRL4_PRUPE1.8e-1377.36Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005730mg PE=4 SV=1[more]
A0A0V0IEA5_SOLCH3.1e-1377.36Putative mitochondrial metalloendopeptidase OMA1-like OS=Solanum chacoense PE=3 ... [more]
M1D270_SOLTU3.1e-1377.36Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031017 PE=3 SV=1[more]
W9S9F8_9ROSA3.1e-1375.47Mitochondrial metalloendopeptidase OMA1 OS=Morus notabilis GN=L484_012957 PE=4 S... [more]
K4BEC3_SOLLC3.1e-1377.36Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1[more]
BLAST of ClCG05G007590 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51740.11.9e-1469.81 Peptidase family M48 family protein[more]
BLAST of ClCG05G007590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|645257270|ref|XP_008234337.1|2.6e-1377.36PREDICTED: uncharacterized protein LOC103333298 [Prunus mume][more]
gi|596049181|ref|XP_007220466.1|2.6e-1377.36hypothetical protein PRUPE_ppa005730mg [Prunus persica][more]
gi|970019872|ref|XP_015071140.1|4.5e-1377.36PREDICTED: uncharacterized protein LOC107015401 [Solanum pennellii][more]
gi|703147520|ref|XP_010109081.1|4.5e-1375.47Mitochondrial metalloendopeptidase OMA1 [Morus notabilis][more]
gi|565362624|ref|XP_006348046.1|4.5e-1377.36PREDICTED: uncharacterized protein LOC102601487 [Solanum tuberosum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016020 membrane
molecular_function GO:0004222 metalloendopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G007590.1ClCG05G007590.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G007590Cucurbita pepo (Zucchini)cpewcgB046
ClCG05G007590Cucurbita pepo (Zucchini)cpewcgB175
ClCG05G007590Cucurbita pepo (Zucchini)cpewcgB207
ClCG05G007590Cucurbita pepo (Zucchini)cpewcgB556
ClCG05G007590Cucurbita pepo (Zucchini)cpewcgB676
ClCG05G007590Cucurbita pepo (Zucchini)cpewcgB678
ClCG05G007590Bottle gourd (USVL1VR-Ls)lsiwcgB023
ClCG05G007590Bottle gourd (USVL1VR-Ls)lsiwcgB336
ClCG05G007590Cucumber (Gy14) v2cgybwcgB203
ClCG05G007590Cucumber (Gy14) v2cgybwcgB360
ClCG05G007590Melon (DHL92) v3.6.1medwcgB025
ClCG05G007590Melon (DHL92) v3.6.1medwcgB416
ClCG05G007590Silver-seed gourdcarwcgB0100
ClCG05G007590Silver-seed gourdcarwcgB0690
ClCG05G007590Silver-seed gourdcarwcgB0847
ClCG05G007590Silver-seed gourdcarwcgB0903
ClCG05G007590Silver-seed gourdcarwcgB0913
ClCG05G007590Cucumber (Chinese Long) v3cucwcgB225
ClCG05G007590Cucumber (Chinese Long) v3cucwcgB245
ClCG05G007590Cucumber (Chinese Long) v3cucwcgB416
ClCG05G007590Watermelon (97103) v2wcgwmbB214
ClCG05G007590Watermelon (97103) v2wcgwmbB229
ClCG05G007590Watermelon (Charleston Gray)wcgwcgB101
ClCG05G007590Cucurbita maxima (Rimu)cmawcgB264
ClCG05G007590Cucumber (Gy14) v1cgywcgB451
ClCG05G007590Cucumber (Gy14) v1cgywcgB521
ClCG05G007590Cucurbita maxima (Rimu)cmawcgB296
ClCG05G007590Cucurbita maxima (Rimu)cmawcgB365
ClCG05G007590Cucurbita maxima (Rimu)cmawcgB559
ClCG05G007590Cucurbita maxima (Rimu)cmawcgB562
ClCG05G007590Cucurbita moschata (Rifu)cmowcgB254
ClCG05G007590Cucurbita moschata (Rifu)cmowcgB290
ClCG05G007590Cucurbita moschata (Rifu)cmowcgB359
ClCG05G007590Cucurbita moschata (Rifu)cmowcgB557
ClCG05G007590Wild cucumber (PI 183967)cpiwcgB226
ClCG05G007590Wild cucumber (PI 183967)cpiwcgB414
ClCG05G007590Cucumber (Chinese Long) v2cuwcgB222
ClCG05G007590Cucumber (Chinese Long) v2cuwcgB475
ClCG05G007590Melon (DHL92) v3.5.1mewcgB027
ClCG05G007590Melon (DHL92) v3.5.1mewcgB427
ClCG05G007590Watermelon (97103) v1wcgwmB286
ClCG05G007590Watermelon (97103) v1wcgwmB301
ClCG05G007590Watermelon (97103) v1wcgwmB314