ClCG05G004260 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G004260
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Description60S ribosomal protein L14, putative
LocationCG_Chr05 : 3910641 .. 3912503 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGGAATAATAAACCCTAGTTTCGACATTGGCACTGTACAATCTTCTTTCTTCTCCCGCCCCTATCTGAAACCTCTGCACACCGACGATGGTAAGCATTCCCCTCCTTAGTTTCTCTCTTTCTAACTACGAATCTACGGCATTTGTTGGTATTATTTTCTTCCCTTCTTTCTTCCTGCCAATTGTTCTGAATTGTTTGTTCTTTCATTCCTTCTGTAGCCGTTTAAAAGGTACGTTGAGATCGGAAGAGTCGCTCTCGTCAACTATGGCGAAGACTATGGAAAGCTTGTCGTCATCGTCGATGTTATTGACCAGAACAGAGTATGTTTCCTTTTGCTATTACTTGTGGTTTTTATCGACGATTACTAGTTTTCAGCTTTAAGTTGTACCAATCCTCTTGCCAATTAGAAAGTCCCGGATTTTTCACTCTTATTATTCTGTTACTGTGAATTCGTTTCTCCTGAATTGCAGTTTACATGATGATCCGAAGACATGCTTCTCATTATTCTGTCATTTATCATTATCATTTATGAAAATCACTCCTCAGCCTCTTCAAGCTCTTCTGGTTGAAATGATAATTGTTGAAATAAACTACAGCATTGCTTATTTAACTTCAGATTCATAGAGTAGGTCATTCTCGTTGGTTACCTGTTACTGATCGTTAGAATGGTTGAGTATGCAAATTATTATTTATCAATGGTTTTCTCTGACGGTCCTCCACCAGCTAGAATGGATTTTTGGTTGCGGAGCTCATGAATTTTACTGTTTCTACTACTTCCCATGAATCTATAGATGCAGATACATGTCATACTAAATTTTTGTGAGGCGTTGAAGCTTGCAGTCTCATGGGAACTTTCCTTTTCTTTCTTCCAACTGAATGTGATTGTACAATATCAATTTTTATTGGTTGAAAGAGTATCTGGATGAAATTATCATTCGTCCACAGTCTAGTTTTTAATTTTATATATATATGTATTTTAATGCTACCACATACAGGCTTTGGTGGATGCTCCCGATATGGTCAGATCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAGGAACTCATTGAAGCTATGAAGGCTGCTGGTACCCTTCTTAACTTAATTTTCACTTATAAATGCTCATTACCCCTACGTTTCTTGTTTTCTTGTCTTTTGGTTTGCTTTAACCTGTTGTTTTGATTGATCATGTCAGATGTTCAGAAGAAGTGGGAGGATAGCTCTTGGGGGAGAAAATTACTCGTGAAGAAAAGAAGGGCATCTCTTAATGATTTTGATAGGTTCAAGCTTATGCTGGCTAAGATAAAGGTCAGTGATAATGTGATTCAATCTATAGTTTGTACATTTTTTTTGTTACCTTTTCGTATGTGTTGACATATGAAAGAGTGCTAAACAAGTTCTATTTTAGAGTGTGAAAGAAGTTTTGTTTTATTTGTCATTAAAAAGAATTTTCTACTGTGTTGTGTTCTTGCTATTTGCTAGATAATTACTCAATGCTTACGGATGAGCATTTTATTTATTTATTTGCAGAGAGCTGGATTGGTGAGGCAAGAACTTGCAAAGCTGAAAAAAAGTGCATCTTAGAAAGTGCGTTTCTTTAGCTTCAAATTTTGTTACATGTTAAAGTTATCAGTTTTGGATTGTTTTCTCTCTTGTTTCTCTAGCCCTCTGGAGTTCGCGATTGTTTTGAGGTGTATGGGATTCTAGACATCCAGTGTAGTGAGTTTTTATTTAACTTTTTCACAAGATGTCCACATTACTCCAATTAAGCATTAATCTGAATCTTTTGATGTTTTTCTGCCTAACTGTTAAATTGGATTGCTG

mRNA sequence

AAGGGAATAATAAACCCTAGTTTCGACATTGGCACTGTACAATCTTCTTTCTTCTCCCGCCCCTATCTGAAACCTCTGCACACCGACGATGCCGTTTAAAAGGTACGTTGAGATCGGAAGAGTCGCTCTCGTCAACTATGGCGAAGACTATGGAAAGCTTGTCGTCATCGTCGATGTTATTGACCAGAACAGAGCTTTGGTGGATGCTCCCGATATGGTCAGATCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAGGAACTCATTGAAGCTATGAAGGCTGCTGATGTTCAGAAGAAGTGGGAGGATAGCTCTTGGGGGAGAAAATTACTCGTGAAGAAAAGAAGGGCATCTCTTAATGATTTTGATAGGTTCAAGCTTATGCTGGCTAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAACTTGCAAAGCTGAAAAAAAGTGCATCTTAGAAAGTGCGTTTCTTTAGCTTCAAATTTTGTTACATGTTAAAGTTATCAGTTTTGGATTGTTTTCTCTCTTGTTTCTCTAGCCCTCTGGAGTTCGCGATTGTTTTGAGGTGTATGGGATTCTAGACATCCAGTGTAGTGAGTTTTTATTTAACTTTTTCACAAGATGTCCACATTACTCCAATTAAGCATTAATCTGAATCTTTTGATGTTTTTCTGCCTAACTGTTAAATTGGATTGCTG

Coding sequence (CDS)

ATGCCGTTTAAAAGGTACGTTGAGATCGGAAGAGTCGCTCTCGTCAACTATGGCGAAGACTATGGAAAGCTTGTCGTCATCGTCGATGTTATTGACCAGAACAGAGCTTTGGTGGATGCTCCCGATATGGTCAGATCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAGGAACTCATTGAAGCTATGAAGGCTGCTGATGTTCAGAAGAAGTGGGAGGATAGCTCTTGGGGGAGAAAATTACTCGTGAAGAAAAGAAGGGCATCTCTTAATGATTTTGATAGGTTCAAGCTTATGCTGGCTAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAACTTGCAAAGCTGAAAAAAAGTGCATCTTAG

Protein sequence

MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLVRQELAKLKKSAS
Homology
[Close]
BLAST of ClCG05G004260 vs. Swiss-Prot
Match: RL142_ARATH (60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.1e-56
Identity = 110/130 (84.62%), Postives = 119/130 (91.54%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELAKLKK 131
           VRQELAKLKK
Sbjct: 121 VRQELAKLKK 130

[Close]
BLAST of ClCG05G004260 vs. Swiss-Prot
Match: RL141_ARATH (60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 8.1e-56
Identity = 109/130 (83.85%), Postives = 118/130 (90.77%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELAKLKK 131
           VRQELAKLK+
Sbjct: 121 VRQELAKLKR 130

[Close]
BLAST of ClCG05G004260 vs. Swiss-Prot
Match: RL14_PEA (Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-55
Identity = 107/133 (80.45%), Postives = 122/133 (91.73%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVAL+NYG+DYG+LVVIVDVIDQ RALVDAPDM RS +NFKRLSLTD+KI
Sbjct: 1   MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KK+LI+A++AADV+ KW  SSWGRKL+VKK RA+LNDFDRFK+MLAKIKRA  
Sbjct: 61  DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAG 120

Query: 121 VRQELAKLKKSAS 134
           VRQELAKLKK+A+
Sbjct: 121 VRQELAKLKKTAA 133

[Close]
BLAST of ClCG05G004260 vs. Swiss-Prot
Match: RL14_LUMRU (60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.1e-27
Identity = 65/133 (48.87%), Postives = 85/133 (63.91%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMVRSQMNFKRLSLTDI 60
           M F+R+VEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++
Sbjct: 1   MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60

Query: 61  KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRA 120
           K       +   + +A +  ++ KKWE+S   +K+  K++R +L DF+RFKLM AK  R 
Sbjct: 61  KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120

Query: 121 GLVRQELAKLKKS 132
            L++ E  KL+K+
Sbjct: 121 RLIKIEFGKLRKA 133

[Close]
BLAST of ClCG05G004260 vs. Swiss-Prot
Match: RL14_GRIJA (60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.0e-27
Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MVRSQMNFKRLSLTDI 60
           M F R+VE GRVALV+YGE   KLVVIVD++DQNR LVD+P   + R  +N KR++LT I
Sbjct: 1   MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60

Query: 61  KI-DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKR 120
           K+ DI R     E+     AA V + +  S WG+KL  +++RA+L+DF RFK+M+A++K+
Sbjct: 61  KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120

Query: 121 AGLVRQELAKLK 130
           +  +  ELAKLK
Sbjct: 121 SKAINAELAKLK 132

[Close]
BLAST of ClCG05G004260 vs. TrEMBL
Match: A0A0A0L4D3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134930 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-65
Identity = 131/133 (98.50%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKAADVQKKWEDSSWGRKLLVK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           VRQELAKLKKSAS
Sbjct: 121 VRQELAKLKKSAS 133

[Close]
BLAST of ClCG05G004260 vs. TrEMBL
Match: A0A0A0L725_CUCSA (Csf-1 protein OS=Cucumis sativus GN=Csa_3G134920 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 5.6e-64
Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELIEAMKA DVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           VRQEL+KLKKS S
Sbjct: 121 VRQELSKLKKSQS 133

[Close]
BLAST of ClCG05G004260 vs. TrEMBL
Match: Q9SXL9_CUCSA (Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-62
Identity = 123/131 (93.89%), Postives = 129/131 (98.47%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKELIEAMKA DVQKKWE+SSWGRKL+VKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELAKLKKS 132
           VRQELAKLKK+
Sbjct: 126 VRQELAKLKKA 136

[Close]
BLAST of ClCG05G004260 vs. TrEMBL
Match: A0A0A0LIH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173070 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-62
Identity = 123/131 (93.89%), Postives = 129/131 (98.47%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKELIEAMKA DVQKKWE+SSWGRKL+VKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKS 132
           VRQELAKLKK+
Sbjct: 121 VRQELAKLKKA 131

[Close]
BLAST of ClCG05G004260 vs. TrEMBL
Match: M5XZC8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013222mg PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.9e-60
Identity = 119/133 (89.47%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDV+DQNRALVD+PDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVLDQNRALVDSPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKEL+ AM+AADV+KKWE+SSWGRKL+V+KRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELLAAMEAADVKKKWENSSWGRKLIVQKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           V+ ELAKLKK  S
Sbjct: 121 VKSELAKLKKETS 133

[Close]
BLAST of ClCG05G004260 vs. TAIR10
Match: AT4G27090.1 (AT4G27090.1 Ribosomal protein L14)

HSP 1 Score: 219.5 bits (558), Expect = 1.2e-57
Identity = 110/130 (84.62%), Postives = 119/130 (91.54%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELAKLKK 131
           VRQELAKLKK
Sbjct: 121 VRQELAKLKK 130

[Close]
BLAST of ClCG05G004260 vs. TAIR10
Match: AT2G20450.1 (AT2G20450.1 Ribosomal protein L14)

HSP 1 Score: 217.6 bits (553), Expect = 4.6e-57
Identity = 109/130 (83.85%), Postives = 118/130 (90.77%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+LNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELAKLKK 131
           VRQELAKLK+
Sbjct: 121 VRQELAKLKR 130

[Close]
BLAST of ClCG05G004260 vs. NCBI nr
Match: gi|449432536|ref|XP_004134055.1| (PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-65
Identity = 131/133 (98.50%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKAADVQKKWEDSSWGRKLLVK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           VRQELAKLKKSAS
Sbjct: 121 VRQELAKLKKSAS 133

[Close]
BLAST of ClCG05G004260 vs. NCBI nr
Match: gi|659076103|ref|XP_008438503.1| (PREDICTED: probable 60S ribosomal protein L14 [Cucumis melo])

HSP 1 Score: 254.6 bits (649), Expect = 9.5e-65
Identity = 130/133 (97.74%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQ+NFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKAADVQKKWEDSSWGRKLLVK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           VRQELAKLKKSAS
Sbjct: 121 VRQELAKLKKSAS 133

[Close]
BLAST of ClCG05G004260 vs. NCBI nr
Match: gi|449432538|ref|XP_004134056.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 8.1e-64
Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELIEAMKA DVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 134
           VRQEL+KLKKS S
Sbjct: 121 VRQELSKLKKSQS 133

[Close]
BLAST of ClCG05G004260 vs. NCBI nr
Match: gi|659076099|ref|XP_008438500.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 8.1e-64
Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 68  MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 127

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELIEAMKA DVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 128 DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 187

Query: 121 VRQELAKLKKSAS 134
           VRQEL+KLKKS S
Sbjct: 188 VRQELSKLKKSQS 200

[Close]
BLAST of ClCG05G004260 vs. NCBI nr
Match: gi|5762251|dbj|BAA83469.1| (Csf-1 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 3.4e-62
Identity = 123/131 (93.89%), Postives = 129/131 (98.47%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKELIEAMKA DVQKKWE+SSWGRKL+VKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELAKLKKS 132
           VRQELAKLKK+
Sbjct: 126 VRQELAKLKKA 136

The following BLAST results are available for this feature:
BLAST of ClCG05G004260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL142_ARATH2.1e-5684.6260S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1[more]
RL141_ARATH8.1e-5683.8560S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1[more]
RL14_PEA1.1e-5580.45Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1[more]
RL14_LUMRU2.1e-2748.8760S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1[more]
RL14_GRIJA6.0e-2750.0060S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1[more]
BLAST of ClCG05G004260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4D3_CUCSA2.3e-6598.50Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134930 PE=4 SV=1[more]
A0A0A0L725_CUCSA5.6e-6496.24Csf-1 protein OS=Cucumis sativus GN=Csa_3G134920 PE=4 SV=1[more]
Q9SXL9_CUCSA2.4e-6293.89Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1[more]
A0A0A0LIH9_CUCSA2.4e-6293.89Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173070 PE=4 SV=1[more]
M5XZC8_PRUPE2.9e-6089.47Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013222mg PE=4 SV=1[more]
BLAST of ClCG05G004260 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27090.11.2e-5784.62 Ribosomal protein L14[more]
AT2G20450.14.6e-5783.85 Ribosomal protein L14[more]
BLAST of ClCG05G004260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432536|ref|XP_004134055.1|3.3e-6598.50PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus][more]
gi|659076103|ref|XP_008438503.1|9.5e-6597.74PREDICTED: probable 60S ribosomal protein L14 [Cucumis melo][more]
gi|449432538|ref|XP_004134056.1|8.1e-6496.24PREDICTED: 60S ribosomal protein L14-1-like [Cucumis sativus][more]
gi|659076099|ref|XP_008438500.1|8.1e-6496.24PREDICTED: 60S ribosomal protein L14-1-like [Cucumis melo][more]
gi|5762251|dbj|BAA83469.1|3.4e-6293.89Csf-1 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002784Ribosomal_L14e_dom
IPR008991Translation_prot_SH3-like_sf
IPR014722Rib_L2_dom2
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G004260.1ClCG05G004260.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002784Ribosomal protein L14e domainPFAMPF01929Ribosomal_L14ecoord: 45..117
score: 7.5
IPR008991Translation protein SH3-like domainunknownSSF50104Translation proteins SH3-like domaincoord: 5..93
score: 2.41
IPR014722Ribosomal protein L2 domain 2GENE3DG3DSA:2.30.30.30coord: 4..85
score: 1.2
NoneNo IPR availablePANTHERPTHR1112760S RIBOSOMAL PROTEIN L14coord: 2..130
score: 2.8
NoneNo IPR availablePANTHERPTHR11127:SF3SUBFAMILY NOT NAMEDcoord: 2..130
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G004260Cucurbita pepo (Zucchini)cpewcgB138
ClCG05G004260Cucurbita pepo (Zucchini)cpewcgB293
ClCG05G004260Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G004260Cucurbita pepo (Zucchini)cpewcgB679
ClCG05G004260Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G004260Bottle gourd (USVL1VR-Ls)lsiwcgB016
ClCG05G004260Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G004260Bottle gourd (USVL1VR-Ls)lsiwcgB337
ClCG05G004260Cucumber (Gy14) v2cgybwcgB129
ClCG05G004260Cucumber (Gy14) v2cgybwcgB203
ClCG05G004260Melon (DHL92) v3.6.1medwcgB329
ClCG05G004260Melon (DHL92) v3.6.1medwcgB376
ClCG05G004260Melon (DHL92) v3.6.1medwcgB416
ClCG05G004260Silver-seed gourdcarwcgB0220
ClCG05G004260Silver-seed gourdcarwcgB0226
ClCG05G004260Silver-seed gourdcarwcgB0757
ClCG05G004260Silver-seed gourdcarwcgB0935
ClCG05G004260Silver-seed gourdcarwcgB1045
ClCG05G004260Cucumber (Chinese Long) v3cucwcgB148
ClCG05G004260Cucumber (Chinese Long) v3cucwcgB225
ClCG05G004260Watermelon (97103) v2wcgwmbB229
ClCG05G004260Watermelon (97103) v2wcgwmbB237
ClCG05G004260Watermelon (97103) v2wcgwmbB242
ClCG05G004260Wax gourdwcgwgoB412
ClCG05G004260Wax gourdwcgwgoB431
ClCG05G004260Wax gourdwcgwgoB447
ClCG05G004260Watermelon (Charleston Gray)wcgwcgB160
ClCG05G004260Watermelon (Charleston Gray)wcgwcgB164
ClCG05G004260Cucumber (Gy14) v1cgywcgB451
ClCG05G004260Cucumber (Gy14) v1cgywcgB653
ClCG05G004260Cucurbita maxima (Rimu)cmawcgB233
ClCG05G004260Cucurbita maxima (Rimu)cmawcgB319
ClCG05G004260Cucurbita maxima (Rimu)cmawcgB464
ClCG05G004260Cucurbita maxima (Rimu)cmawcgB560
ClCG05G004260Cucurbita maxima (Rimu)cmawcgB737
ClCG05G004260Cucurbita maxima (Rimu)cmawcgB795
ClCG05G004260Cucurbita moschata (Rifu)cmowcgB219
ClCG05G004260Cucurbita moschata (Rifu)cmowcgB315
ClCG05G004260Cucurbita moschata (Rifu)cmowcgB463
ClCG05G004260Cucurbita moschata (Rifu)cmowcgB558
ClCG05G004260Cucurbita moschata (Rifu)cmowcgB743
ClCG05G004260Cucurbita moschata (Rifu)cmowcgB792
ClCG05G004260Wild cucumber (PI 183967)cpiwcgB141
ClCG05G004260Wild cucumber (PI 183967)cpiwcgB226
ClCG05G004260Cucumber (Chinese Long) v2cuwcgB136
ClCG05G004260Cucumber (Chinese Long) v2cuwcgB222
ClCG05G004260Melon (DHL92) v3.5.1mewcgB335
ClCG05G004260Melon (DHL92) v3.5.1mewcgB385
ClCG05G004260Melon (DHL92) v3.5.1mewcgB427
ClCG05G004260Watermelon (97103) v1wcgwmB280
ClCG05G004260Watermelon (97103) v1wcgwmB286
ClCG05G004260Watermelon (97103) v1wcgwmB311