ClCG05G003990 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G003990
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr05 : 3697752 .. 3701434 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATGAAAATGAAATGGCATCATTGAAAATTCCATTTTGATATTCTATAATCTTCTCTCTTCTGATTTCTGAACTCAACAGCAGCAAAAGCTTAAGGCTCTAATGGGGTCCGCCACTGCGAAGCTTTCAGGCAAATGCGCCCTTTGGCATTCGTTGACCCAACCATCACTTACACGGCCGATTTGAATCGTTATTCCTTTTTTTGAAATCCCCAAAAGCCATTTCTCCCATAACTTGCCTCACTACTCATTATTTTTTCTCTGCCATTCTTTTTTTCTCTCTTTGAAGATACGCTTTCAACGCTTGATTTCTGGGTTTCTCCTTCTACTGATTCGTTTTGATGGTTCGAAACACAATACCCATATGCCGCATCTCTGTTTCGTCGACGGTTGAAGCTATTCCTGAGAAGATGAAGGATCAATCCGCAAGTGGGTTTTATCTAATTCTGGGTTTGTTTTTGGATCTACTGTTCTTGATTTTATATTGATTTATTTTTTCCTTCTGTTTTTGTTGGACTTCAAGACTATCCGAGGGTGAAGGTGAGGGAGGAGAAAGACTCGGATGATTGTCCTGCTGTATATGAGCAGAAGAGAAGTTATTTGTTGTCTCTGAAAGATTTGGAATCACTGTTACTTCAAGACTCCTCCAATTCCCCAGGTACTCACTAGTTTCTATAAATTTATGGGTCTGATTTGCTTGTGGTTTCTGCCAGTTGAAAAGTGATAGCTGATCAACCAAACATGTTTCTAGTATTTAACCAAACATGTTTCTAGTATTTTCGTGATTTGGAGGCTGAGAACGAATAATCAGAAGCTGACACTTATGTTTAGATAAGCCATAAATTTGAACTTTCAAAGTTAATCCAAGCCTTTGTCTCGGGTGTTCGGGCTTCAGCAGAATGTTTGAGGTTTTTCCATAATTAGGAAAAGAAGATAGATCATCTGGAACAATTCTTAGACAAATTTTGCCAAAGAAAGAAGGAAGGAAAGAATGAAAAACCATTTCTTCATTGTTGATCACCTTTTGCAAAAATTGTATGCTAAGCTTGTGCTGCGCATGCCATCCCTTTGCGTGGAGGAAAGAAGCCATTATTGATGGCCTCCTTTGGTTCTCAGTTTGGTGCCTTAATTTCAAGCATGGAAAAGAGTATTGTTTATGATATGGGGATAAGAAACAACTAGACAGTTGCAGGGATAAAATTTAAAAAGAAGAGATCTAATTTCAAAGGAGTTAAGAAGAAAAACTCTAATTTTAGGCCATGAAGAAAGGGAGAATAGTTACAAGATGCTTTAGACCTAGAACTTCAAAGAAAAGCAATAATAGCTCTAGTATCCCAAATCACTCAAAGGTCTTTGCAGAACATGCCTGAAAAGATCCTCCAATTCCAATCTAAGCTTTCTTTTGTAGAACCCAAAAGACAGATTGGAAGGCATCTTGCACTTATCTACGGAAAGCAAACTGCAGATTTGAAGTGTGGAGTAAGTTTCCCCCAAATCTTGGTTTGGTTTTATTGGATTGGAGTCCATTTTTTTAATTAATTTTGAGCTCTGTCACGCTTTCCTTCTTGTGGACTATTCTTTTGAATGCCCTTATTTTTCTTACATCTTGCTCGGTTTCTTACCATAAAGGTAAATATAAATAAACAAATAAAAGCTTCTACCAAAATCTGATAGAAAACGAAGGCTCGAGGAATCAATAATTGGTGGGGGAGGGTAGTACGAAAACTGCCAGACACTCAAAATATCTGTAAATTGTAACTCCTTCGAAAGATGAGATAAAATCCCTCCAACTCCACCAATACCTTTCTCACTCTGCTTTGAGAAGTCTACCATCCTGCTAACTCCTAAGGTTCTATAACATGCTCACTCCTTTTTCCCATCTCCATGAACTTGTATTGTCATGCATTGTCTTCTTCCTTCTACCATACATGCAGACAACCCCGAGTTCTTTTCAGATAACAAGAAAATTTAGGAAGTACTACATTTCAAAGTTTCCTTTGAACTCTTCTTGAACTTACTTTTCTCTAACTACAATCCTTGTGATTAAAGTCGATTGGGGTTATTCTTCGGATTTCTCAGGTTAATTCCAATTGACTCATTTTTTTATTACCTGTGTTTCTTATCAACAGCAGCAACCATAATAAAGGTTGAATATTGTTCTCTCTGGATTTTGACATGATGGTGTTTTCGCTAAGATTTGGTATTTTCACAGGAAAGGAACACCGTGTTTCTCCATCATCCTTGGCTAAAATTCCGAAAGCTTGCAGTCCCGATGGAATCAAGCCATCCACTTCTGAATCTCAAGGTATGATACTAACACTATATTTTCATCATCCTACCCTGGGATACCTTATCCTACTCGTTGGTGCCTGAGATACCTTTACTGCTAACACAAATGCTTTTCTCCATTTGCAGAAGCAGAAAGGAGGTGTAAAATGGTTGATGAGGATAACAAAGCAAATATTAGAGCTAGTTCAATCCCAATGCCCCGTGCCGTCATATCCAGCCCTGGTATTTCCTACCCTCTATGAACTAATATTTGTGAATTTTAGTTCAATTAACAAATTGTCATCTGGACATGTACCATATTGGAACTATTTTTACTACATTGTTAAAGCGTCCAAATTAAACTCCATTGGTTGAAGCCTTTTGCCCCTTTCTTTTCTTTTCTTTTTCCTTTTAATTTTATTTTTATTCGCTTTATAAATAGATTGCCAGTTTTCTATCCAAAAGGGAAAGTACTAATCCATGTTACTTTTGGAAAACATGAAAGACATTTGAATTAATTCGACAGTGTAAGAACAATATTCTTGCTATTCTGTAAACATGGAAAGACATTCGAATTAGTAATAATGATCCTAAGTCCAAAAGTTCACTAACGTAAGCATTATGAGTCACATATATGTTTGAGAATCTTGTAGACTCTTTAAGCATCTTAATTTTAATATGTATGCCTTGTGAATATCATTTTATTAATTGAAGCTTTCAATATTCTATTTCAGAAAATGATCAAATGATTGGGAAGAAAAACAGAAAAACAATCGAAAAACCGTCAGTTTTGAAGAATCGCAATTCAGTCCAGTCTAGACACTCACAATGTAAGATCATCGCGAGCCACAGTGGCAATGAGAATCCCATTTCCTCAAGGAGATCCAAGGAGACTGCTGATAGTAGATGTCAAACTGTTGGAAAGAATGGTACAGCCTACAGGGGCAGCAGCATCATGTCAAAGATGACTCCCTAAAAGCAAGAGACCAGTTCTTGGGCTGATGATTTTGGGCATGTTACCTTAAAATAGGCCAAATATATAACAATTGAGTCAAGTCTTGCGCTGGTTTTTAGTATCATTGTGGTGCTTTGTCTAATTGCTCAACAACCGATTCCTCGTTCATATCATAGCTTGGAATCAGCTTCCTCGCTAACATGAATTACTTTATATCCATGTGGCCTGAGATGTTTTGCACTTGAAAACTTGAGACGAATGAAGTTCTATTAACAGCCAGCAAAACTCTCCACTTACATTGCTATGAAACCAGTCTTGACATGGATTTTTCACCCCTCTGTTGTTTGCAACTTAGCTTCCTTCATTTTAGAATTCCATTTACCTCCAGATGCAACAACCTTACAACATAACAGATTCTATCAAAATGAGGATTTGAACGATCTCCAGAAAGAAAGATGT

mRNA sequence

GAAGATGAAAATGAAATGGCATCATTGAAAATTCCATTTTGATATTCTATAATCTTCTCTCTTCTGATTTCTGAACTCAACAGCAGCAAAAGCTTAAGGCTCTAATGGGGTCCGCCACTGCGAAGCTTTCAGGCAAATGCGCCCTTTGGCATTCGTTGACCCAACCATCACTTACACGGCCGATTTGAATCGTTATTCCTTTTTTTGAAATCCCCAAAAGCCATTTCTCCCATAACTTGCCTCACTACTCATTATTTTTTCTCTGCCATTCTTTTTTTCTCTCTTTGAAGATACGCTTTCAACGCTTGATTTCTGGGTTTCTCCTTCTACTGATTCGTTTTGATGGTTCGAAACACAATACCCATATGCCGCATCTCTGTTTCGTCGACGGTTGAAGCTATTCCTGAGAAGATGAAGGATCAATCCGCAAACTATCCGAGGGTGAAGGTGAGGGAGGAGAAAGACTCGGATGATTGTCCTGCTGTATATGAGCAGAAGAGAAGTTATTTGTTGTCTCTGAAAGATTTGGAATCACTGTTACTTCAAGACTCCTCCAATTCCCCAGGAAAGGAACACCGTGTTTCTCCATCATCCTTGGCTAAAATTCCGAAAGCTTGCAGTCCCGATGGAATCAAGCCATCCACTTCTGAATCTCAAGAAGCAGAAAGGAGGTGTAAAATGGTTGATGAGGATAACAAAGCAAATATTAGAGCTAGTTCAATCCCAATGCCCCGTGCCGTCATATCCAGCCCTGAAAATGATCAAATGATTGGGAAGAAAAACAGAAAAACAATCGAAAAACCGTCAGTTTTGAAGAATCGCAATTCAGTCCAGTCTAGACACTCACAATGTAAGATCATCGCGAGCCACAGTGGCAATGAGAATCCCATTTCCTCAAGGAGATCCAAGGAGACTGCTGATAGTAGATGTCAAACTGTTGGAAAGAATGGTACAGCCTACAGGGGCAGCAGCATCATGTCAAAGATGACTCCCTAAAAGCAAGAGACCAGTTCTTGGGCTGATGATTTTGGGCATGTTACCTTAAAATAGGCCAAATATATAACAATTGAGTCAAGTCTTGCGCTGGTTTTTAGTATCATTGTGGTGCTTTGTCTAATTGCTCAACAACCGATTCCTCGTTCATATCATAGCTTGGAATCAGCTTCCTCGCTAACATGAATTACTTTATATCCATGTGGCCTGAGATGTTTTGCACTTGAAAACTTGAGACGAATGAAGTTCTATTAACAGCCAGCAAAACTCTCCACTTACATTGCTATGAAACCAGTCTTGACATGGATTTTTCACCCCTCTGTTGTTTGCAACTTAGCTTCCTTCATTTTAGAATTCCATTTACCTCCAGATGCAACAACCTTACAACATAACAGATTCTATCAAAATGAGGATTTGAACGATCTCCAGAAAGAAAGATGT

Coding sequence (CDS)

ATGGTTCGAAACACAATACCCATATGCCGCATCTCTGTTTCGTCGACGGTTGAAGCTATTCCTGAGAAGATGAAGGATCAATCCGCAAACTATCCGAGGGTGAAGGTGAGGGAGGAGAAAGACTCGGATGATTGTCCTGCTGTATATGAGCAGAAGAGAAGTTATTTGTTGTCTCTGAAAGATTTGGAATCACTGTTACTTCAAGACTCCTCCAATTCCCCAGGAAAGGAACACCGTGTTTCTCCATCATCCTTGGCTAAAATTCCGAAAGCTTGCAGTCCCGATGGAATCAAGCCATCCACTTCTGAATCTCAAGAAGCAGAAAGGAGGTGTAAAATGGTTGATGAGGATAACAAAGCAAATATTAGAGCTAGTTCAATCCCAATGCCCCGTGCCGTCATATCCAGCCCTGAAAATGATCAAATGATTGGGAAGAAAAACAGAAAAACAATCGAAAAACCGTCAGTTTTGAAGAATCGCAATTCAGTCCAGTCTAGACACTCACAATGTAAGATCATCGCGAGCCACAGTGGCAATGAGAATCCCATTTCCTCAAGGAGATCCAAGGAGACTGCTGATAGTAGATGTCAAACTGTTGGAAAGAATGGTACAGCCTACAGGGGCAGCAGCATCATGTCAAAGATGACTCCCTAA

Protein sequence

MVRNTIPICRISVSSTVEAIPEKMKDQSANYPRVKVREEKDSDDCPAVYEQKRSYLLSLKDLESLLLQDSSNSPGKEHRVSPSSLAKIPKACSPDGIKPSTSESQEAERRCKMVDEDNKANIRASSIPMPRAVISSPENDQMIGKKNRKTIEKPSVLKNRNSVQSRHSQCKIIASHSGNENPISSRRSKETADSRCQTVGKNGTAYRGSSIMSKMTP

Homology

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BLAST of ClCG05G003990 vs. TrEMBL
Match: A0A0A0L861_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134610 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.6e-95
Identity = 182/219 (83.11%), Postives = 195/219 (89.04%), Query Frame = 1


Query: 1   MVRNTIPICRISVSSTVEAIPEKMKDQSANYPRVKVREEKDSDDCPAVYEQKRSYLLSLK 60
           MVRNTIPICRISVSSTVEA+PEKMKDQSANYP+VKVREE++ DD P VYEQKRSYLLSLK
Sbjct: 1   MVRNTIPICRISVSSTVEAVPEKMKDQSANYPKVKVREEENLDDRPVVYEQKRSYLLSLK 60

Query: 61  DLESLLLQDSSNSPGK--EHRVSPSSLAKIPKACSPDGIKPSTSESQEAERRCKMVDEDN 120
           DLESL LQDSSN+PGK  EHRVS  S AKIPKACS + IKPSTSE QE+ER C +VDEDN
Sbjct: 61  DLESLFLQDSSNTPGKVKEHRVSLLSCAKIPKACSTNEIKPSTSEPQESERSCTIVDEDN 120

Query: 121 KANIRASSIPMPRAVISSPENDQMIGKKNRKTIEKPSVLKNRNSVQSRHSQCKIIASHSG 180
           KANIRASSIPMPRAV+SSPENDQMIGKKNRKT EKPSVLKN NSVQSRHSQCKIIA HS 
Sbjct: 121 KANIRASSIPMPRAVVSSPENDQMIGKKNRKTTEKPSVLKNCNSVQSRHSQCKIIARHSA 180

Query: 181 NENPISSRRSKETADSRCQTVGKNGTAYRGSSIMSKMTP 218
           NEN ISSRRSK+T DS+C++VGKNGT YRG S MSK TP
Sbjct: 181 NENSISSRRSKDTTDSKCRSVGKNGTTYRGGSFMSKTTP 219

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BLAST of ClCG05G003990 vs. TrEMBL
Match: B9SQT4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1217400 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.4e-33
Identity = 83/178 (46.63%), Postives = 117/178 (65.73%), Query Frame = 1


Query: 29  ANYPRVKVREEKDSDDCPAVYEQKRSYLLSLKDLESLLLQDSSNSPGKEHR-VSPSSLAK 88
           A YP+VKVR E   DD     E   + LLSLKD++ LLLQDS   P KE+R VSP  +AK
Sbjct: 17  AMYPKVKVRTE-GQDDLYVAREHNWTSLLSLKDIQFLLLQDSC-FPVKEYRDVSPVPIAK 76

Query: 89  IPKACSPDGIKPSTSESQEAERRCKMVDEDNKANIRASSIPMPRAVISSPENDQMIGKKN 148
           IPK   P+ + P+ S S+  + +    DE+++ NIRAS +P PRAVISSP+ND +I  KN
Sbjct: 77  IPKTYVPNILLPTESASEGVDNKSSS-DEEDRPNIRASLVPRPRAVISSPDNDALIANKN 136

Query: 149 RKTIEKPSVLKNRNSVQSRHSQCKIIASHSGNENPISSRRSKETADSRCQTVGKNGTA 206
           R    +PS LKN N ++SRH+QCK++ S + +E+P+++ +SK+T D +    G  G+A
Sbjct: 137 RVKATQPSALKNHNLIRSRHAQCKVVPSQAIDESPLNTSKSKDTTDKKIDVRGTKGSA 191

[Close]

BLAST of ClCG05G003990 vs. TrEMBL
Match: A0A067KND6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12868 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-31
Identity = 77/173 (44.51%), Postives = 114/173 (65.90%), Query Frame = 1


Query: 31  YPRVKVREEKDSDDCPAVYEQKRSYLLSLKDLESLLLQDSSNSPGKEHRVSPSSLAKIPK 90
           YP+VKVR ++D  D     ++  S LLSLKD++ LLLQDS     +   VSP+  A+IPK
Sbjct: 38  YPKVKVRRDEDQKD-----QRNWSSLLSLKDIQFLLLQDSCFPVKEFQDVSPTPTARIPK 97

Query: 91  ACSPDGIKPSTSESQEAERRCKMVDEDNKANIRASSIPMPRAVISSPENDQMIGKKNRKT 150
           +  P+ + P+ S S+ A+++   VDE+N+  IRASS+P PRAVISSP+ND +IG KN   
Sbjct: 98  SYVPNIVLPAESASEGADKKGD-VDEENRPKIRASSVPRPRAVISSPDNDAVIGNKN--- 157

Query: 151 IEKPSVLKNRNSVQSRHSQCKIIASHSGNENPISSRRSKETADSRCQTVGKNG 204
             KP  LKN NS+Q+RH+ CK++ + + +E+P+++R+S    D +    GK G
Sbjct: 158 --KPKALKNHNSIQNRHTHCKVVQTRAVDESPLNTRKSNNNTDRKFDLKGKKG 199

[Close]

BLAST of ClCG05G003990 vs. TrEMBL
Match: A0A059B2F2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02917 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-24
Identity = 70/166 (42.17%), Postives = 102/166 (61.45%), Query Frame = 1


Query: 31  YPRVKVREEKDSDDCPAVYEQ-KRSYLLSLKDLESLLLQDSSNSPGKEHRVSPSSLAKIP 90
           YP+VKV+   DS D   V     +S LL LK L+ L L D  +SP +EH+V     A++ 
Sbjct: 2   YPKVKVKVRDDSGDRDDVKRDVPKSPLLGLKALDYLSLHDF-DSPVQEHQVFRPRTARVQ 61

Query: 91  KACSPDGIKPSTSESQEAERRCKMVDEDNKANIRASSIPMPRAVISSPENDQMIGKKNRK 150
           K+   + ++   SE +         DED+K NIRAS++P PRAV+SSP+ND MIGKKN++
Sbjct: 62  KSSMENALRYPVSEGKSESTS----DEDSKLNIRASTVPRPRAVLSSPDNDVMIGKKNKR 121

Query: 151 TIEKPSVLKNRNSVQSRHSQCKIIASHSGNENPISSRRSKETADSR 196
            +E+PS LKN+N +Q R+ Q K I+  +    P S+R+ K+T D +
Sbjct: 122 IVERPSALKNKNPLQLRNGQPKDISKEAVYYEPKSTRKPKDTTDDK 162

[Close]

BLAST of ClCG05G003990 vs. TrEMBL
Match: A0A061EMX8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_020992 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.1e-24
Identity = 75/180 (41.67%), Postives = 106/180 (58.89%), Query Frame = 1


Query: 31  YPRVKVREEKDSDDCPAVYEQKRSYLLSLKDLESLLLQDSSNSPGKEHRVSPSSLAKIPK 90
           YPRVKV+E+   DD  A+++ K S +LSLKD+  L + DS         VSP + A+IP+
Sbjct: 2   YPRVKVKEQ-GQDDQYAMHDYKISSVLSLKDVLFLSMLDSYFPVKTPQDVSPIAKARIPE 61

Query: 91  ACSPDGIKPSTSESQEAERRCKMVDEDNKANIRASSIPMPRAVISSPENDQMIGKKNRKT 150
           +  P+  KPS S   E+E+  K  DE+++ NIR S  P PRAVISSP+ND +IG  NR  
Sbjct: 62  SYVPEVEKPSDSAPAESEKNNKATDEEDRPNIRVSLTPRPRAVISSPDNDAVIGHNNRIK 121

Query: 151 IEKPSVLKNRNSVQSRHSQCKIIASHSGNENPISSRRSKETADSRCQTVGKNGTAYRGSS 210
            E  + LKN  +VQ+RH+      SH    + + +R+SK+ ADS  +   K G+    SS
Sbjct: 122 GEHCAALKNHLTVQNRHT----TRSHIFARSSVKTRKSKDDADSNFEIKPKKGSGTTVSS 176

[Close]

BLAST of ClCG05G003990 vs. TAIR10
Match: AT4G21865.1 (AT4G21865.1 unknown protein)

HSP 1 Score: 58.2 bits (139), Expect = 7.5e-09
Identity = 50/142 (35.21%), Postives = 70/142 (49.30%), Query Frame = 1


Query: 31  YPRVKVREEKDSDDCPAVYEQKRSYLLSLKDLESLLLQDSSNSPGKEHRVSPSSLAKIPK 90
           YP+VK+  E         Y+QK S L S      L  + S N+   + ++    +AKIPK
Sbjct: 2   YPKVKIDNEAGR------YKQKGSCLNS----NYLQTRVSENNQEDDLQIY---VAKIPK 61

Query: 91  ACSPDGIKPSTSESQEAERRCKMVDEDNKANIRASSIPMPRAVISSPENDQMIGKKNRKT 150
              P  +  S SES+E  +  +  D + K   +AS    PRAV+SSP+ND MIG  N   
Sbjct: 62  IYIPS-VLMSQSESKEMNKPIRGADIEVKPITKASPTLRPRAVVSSPDNDAMIGNMNMIE 121

Query: 151 IEKPSV-LKNRNSVQSRHSQCK 172
             K    LK+++ ++SR SQ K
Sbjct: 122 ERKAKKGLKSKDHIKSRASQLK 129

[Close]

BLAST of ClCG05G003990 vs. NCBI nr
Match: gi|449432504|ref|XP_004134039.1| (PREDICTED: uncharacterized protein LOC101203442 [Cucumis sativus])

HSP 1 Score: 356.3 bits (913), Expect = 3.8e-95
Identity = 182/219 (83.11%), Postives = 195/219 (89.04%), Query Frame = 1


Query: 1   MVRNTIPICRISVSSTVEAIPEKMKDQSANYPRVKVREEKDSDDCPAVYEQKRSYLLSLK 60
           MVRNTIPICRISVSSTVEA+PEKMKDQSANYP+VKVREE++ DD P VYEQKRSYLLSLK
Sbjct: 1   MVRNTIPICRISVSSTVEAVPEKMKDQSANYPKVKVREEENLDDRPVVYEQKRSYLLSLK 60

Query: 61  DLESLLLQDSSNSPGK--EHRVSPSSLAKIPKACSPDGIKPSTSESQEAERRCKMVDEDN 120
           DLESL LQDSSN+PGK  EHRVS  S AKIPKACS + IKPSTSE QE+ER C +VDEDN
Sbjct: 61  DLESLFLQDSSNTPGKVKEHRVSLLSCAKIPKACSTNEIKPSTSEPQESERSCTIVDEDN 120

Query: 121 KANIRASSIPMPRAVISSPENDQMIGKKNRKTIEKPSVLKNRNSVQSRHSQCKIIASHSG 180
           KANIRASSIPMPRAV+SSPENDQMIGKKNRKT EKPSVLKN NSVQSRHSQCKIIA HS 
Sbjct: 121 KANIRASSIPMPRAVVSSPENDQMIGKKNRKTTEKPSVLKNCNSVQSRHSQCKIIARHSA 180

Query: 181 NENPISSRRSKETADSRCQTVGKNGTAYRGSSIMSKMTP 218
           NEN ISSRRSK+T DS+C++VGKNGT YRG S MSK TP
Sbjct: 181 NENSISSRRSKDTTDSKCRSVGKNGTTYRGGSFMSKTTP 219

[Close]

BLAST of ClCG05G003990 vs. NCBI nr
Match: gi|659076023|ref|XP_008438459.1| (PREDICTED: uncharacterized protein LOC103483545 [Cucumis melo])

HSP 1 Score: 352.8 bits (904), Expect = 4.2e-94
Identity = 179/219 (81.74%), Postives = 195/219 (89.04%), Query Frame = 1


Query: 1   MVRNTIPICRISVSSTVEAIPEKMKDQSANYPRVKVREEKDSDDCPAVYEQKRSYLLSLK 60
           MVRNTIPICRISVSSTVEA+PEKMKD+SANYP+VKV+EE++ DD P VYEQKRSYL SLK
Sbjct: 1   MVRNTIPICRISVSSTVEAVPEKMKDKSANYPKVKVKEEENLDDRPVVYEQKRSYLFSLK 60

Query: 61  DLESLLLQDSSNSPGK--EHRVSPSSLAKIPKACSPDGIKPSTSESQEAERRCKMVDEDN 120
           DLESL LQDSSN+PGK  EH VSP   AKIPKACS + IKPSTSE QEAERRCK+VDE+N
Sbjct: 61  DLESLFLQDSSNTPGKVKEHCVSPLYCAKIPKACSTNEIKPSTSEPQEAERRCKIVDEEN 120

Query: 121 KANIRASSIPMPRAVISSPENDQMIGKKNRKTIEKPSVLKNRNSVQSRHSQCKIIASHSG 180
           KANIRASSIPMPRAVISSPENDQMIGKKNRKT ++PSVLKN NSVQSRHS CKIIASH G
Sbjct: 121 KANIRASSIPMPRAVISSPENDQMIGKKNRKTTKQPSVLKNCNSVQSRHSLCKIIASHGG 180

Query: 181 NENPISSRRSKETADSRCQTVGKNGTAYRGSSIMSKMTP 218
           NENPISSRRSK+T DS+C++VGKNGT Y G S MSK TP
Sbjct: 181 NENPISSRRSKDTTDSKCRSVGKNGTTYMGGSFMSKTTP 219

[Close]

BLAST of ClCG05G003990 vs. NCBI nr
Match: gi|223532221|gb|EEF34025.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32
Identity = 83/178 (46.63%), Postives = 117/178 (65.73%), Query Frame = 1


Query: 29  ANYPRVKVREEKDSDDCPAVYEQKRSYLLSLKDLESLLLQDSSNSPGKEHR-VSPSSLAK 88
           A YP+VKVR E   DD     E   + LLSLKD++ LLLQDS   P KE+R VSP  +AK
Sbjct: 17  AMYPKVKVRTE-GQDDLYVAREHNWTSLLSLKDIQFLLLQDSC-FPVKEYRDVSPVPIAK 76

Query: 89  IPKACSPDGIKPSTSESQEAERRCKMVDEDNKANIRASSIPMPRAVISSPENDQMIGKKN 148
           IPK   P+ + P+ S S+  + +    DE+++ NIRAS +P PRAVISSP+ND +I  KN
Sbjct: 77  IPKTYVPNILLPTESASEGVDNKSSS-DEEDRPNIRASLVPRPRAVISSPDNDALIANKN 136

Query: 149 RKTIEKPSVLKNRNSVQSRHSQCKIIASHSGNENPISSRRSKETADSRCQTVGKNGTA 206
           R    +PS LKN N ++SRH+QCK++ S + +E+P+++ +SK+T D +    G  G+A
Sbjct: 137 RVKATQPSALKNHNLIRSRHAQCKVVPSQAIDESPLNTSKSKDTTDKKIDVRGTKGSA 191

[Close]

BLAST of ClCG05G003990 vs. NCBI nr
Match: gi|1000948212|ref|XP_015580364.1| (PREDICTED: uncharacterized protein LOC8265730 [Ricinus communis])

HSP 1 Score: 147.9 bits (372), Expect = 2.0e-32
Identity = 82/176 (46.59%), Postives = 116/176 (65.91%), Query Frame = 1


Query: 31  YPRVKVREEKDSDDCPAVYEQKRSYLLSLKDLESLLLQDSSNSPGKEHR-VSPSSLAKIP 90
           YP+VKVR E   DD     E   + LLSLKD++ LLLQDS   P KE+R VSP  +AKIP
Sbjct: 2   YPKVKVRTE-GQDDLYVAREHNWTSLLSLKDIQFLLLQDSC-FPVKEYRDVSPVPIAKIP 61

Query: 91  KACSPDGIKPSTSESQEAERRCKMVDEDNKANIRASSIPMPRAVISSPENDQMIGKKNRK 150
           K   P+ + P+ S S+  + +    DE+++ NIRAS +P PRAVISSP+ND +I  KNR 
Sbjct: 62  KTYVPNILLPTESASEGVDNKSSS-DEEDRPNIRASLVPRPRAVISSPDNDALIANKNRV 121

Query: 151 TIEKPSVLKNRNSVQSRHSQCKIIASHSGNENPISSRRSKETADSRCQTVGKNGTA 206
              +PS LKN N ++SRH+QCK++ S + +E+P+++ +SK+T D +    G  G+A
Sbjct: 122 KATQPSALKNHNLIRSRHAQCKVVPSQAIDESPLNTSKSKDTTDKKIDVRGTKGSA 174

[Close]

BLAST of ClCG05G003990 vs. NCBI nr
Match: gi|643724019|gb|KDP33319.1| (hypothetical protein JCGZ_12868 [Jatropha curcas])

HSP 1 Score: 143.7 bits (361), Expect = 3.9e-31
Identity = 77/173 (44.51%), Postives = 114/173 (65.90%), Query Frame = 1


Query: 31  YPRVKVREEKDSDDCPAVYEQKRSYLLSLKDLESLLLQDSSNSPGKEHRVSPSSLAKIPK 90
           YP+VKVR ++D  D     ++  S LLSLKD++ LLLQDS     +   VSP+  A+IPK
Sbjct: 38  YPKVKVRRDEDQKD-----QRNWSSLLSLKDIQFLLLQDSCFPVKEFQDVSPTPTARIPK 97

Query: 91  ACSPDGIKPSTSESQEAERRCKMVDEDNKANIRASSIPMPRAVISSPENDQMIGKKNRKT 150
           +  P+ + P+ S S+ A+++   VDE+N+  IRASS+P PRAVISSP+ND +IG KN   
Sbjct: 98  SYVPNIVLPAESASEGADKKGD-VDEENRPKIRASSVPRPRAVISSPDNDAVIGNKN--- 157

Query: 151 IEKPSVLKNRNSVQSRHSQCKIIASHSGNENPISSRRSKETADSRCQTVGKNG 204
             KP  LKN NS+Q+RH+ CK++ + + +E+P+++R+S    D +    GK G
Sbjct: 158 --KPKALKNHNSIQNRHTHCKVVQTRAVDESPLNTRKSNNNTDRKFDLKGKKG 199

The following BLAST results are available for this feature:

BLAST of ClCG05G003990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L861_CUCSA	2.6e-95	83.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134610 PE=4 SV=1	[more]
B9SQT4_RICCO	8.4e-33	46.63	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1217400 PE=4 SV=1	[more]
A0A067KND6_JATCU	2.7e-31	44.51	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12868 PE=4 SV=1	[more]
A0A059B2F2_EUCGR	3.2e-24	42.17	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02917 PE=4 SV=1	[more]
A0A061EMX8_THECC	7.1e-24	41.67	Uncharacterized protein OS=Theobroma cacao GN=TCM_020992 PE=4 SV=1	[more]

BLAST of ClCG05G003990 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21865.1	7.5e-09	35.21	unknown protein	[more]

BLAST of ClCG05G003990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432504\|ref\|XP_004134039.1\|	3.8e-95	83.11	PREDICTED: uncharacterized protein LOC101203442 [Cucumis sativus]	[more]
gi\|659076023\|ref\|XP_008438459.1\|	4.2e-94	81.74	PREDICTED: uncharacterized protein LOC103483545 [Cucumis melo]	[more]
gi\|223532221\|gb\|EEF34025.1\|	1.2e-32	46.63	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000948212\|ref\|XP_015580364.1\|	2.0e-32	46.59	PREDICTED: uncharacterized protein LOC8265730 [Ricinus communis]	[more]
gi\|643724019\|gb\|KDP33319.1\|	3.9e-31	44.51	hypothetical protein JCGZ_12868 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004386	helicase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G003990.1	ClCG05G003990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38932	FAMILY NOT NAMED	coord: 31..215 score: 8.2
None	No IPR available	PANTHER	PTHR38932:SF1	SUBFAMILY NOT NAMED	coord: 31..215 score: 8.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G003990	Csa3G134610	Cucumber (Chinese Long) v2	cuwcgB222
ClCG05G003990	MELO3C006376	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G003990	Cla021484	Watermelon (97103) v1	wcgwmB286
ClCG05G003990	Cla97C05G084620	Watermelon (97103) v2	wcgwmbB229
ClCG05G003990	Bhi01G000468	Wax gourd	wcgwgoB443
ClCG05G003990	CSPI03G11560	Wild cucumber (PI 183967)	cpiwcgB226
ClCG05G003990	Cucsa.255810	Cucumber (Gy14) v1	cgywcgB451
ClCG05G003990	CmaCh06G012910	Cucurbita maxima (Rimu)	cmawcgB737
ClCG05G003990	CmoCh06G013000	Cucurbita moschata (Rifu)	cmowcgB743
ClCG05G003990	Lsi05G017720	Bottle gourd (USVL1VR-Ls)	lsiwcgB335
ClCG05G003990	Cp4.1LG08g03190	Cucurbita pepo (Zucchini)	cpewcgB787
ClCG05G003990	CsGy3G011610	Cucumber (Gy14) v2	cgybwcgB203
ClCG05G003990	MELO3C006376.2	Melon (DHL92) v3.6.1	medwcgB416
ClCG05G003990	Carg06248	Silver-seed gourd	carwcgB0935
ClCG05G003990	CsaV3_3G011680	Cucumber (Chinese Long) v3	cucwcgB225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G003990	Silver-seed gourd	carwcgB0220
ClCG05G003990	Silver-seed gourd	carwcgB0226
ClCG05G003990	Silver-seed gourd	carwcgB0757
ClCG05G003990	Silver-seed gourd	carwcgB1045
ClCG05G003990	Cucumber (Chinese Long) v3	cucwcgB148
ClCG05G003990	Cucumber (Chinese Long) v3	cucwcgB246
ClCG05G003990	Watermelon (97103) v2	wcgwmbB237
ClCG05G003990	Watermelon (97103) v2	wcgwmbB242
ClCG05G003990	Wax gourd	wcgwgoB412
ClCG05G003990	Wax gourd	wcgwgoB431
ClCG05G003990	Wax gourd	wcgwgoB447
ClCG05G003990	Watermelon (Charleston Gray)	wcgwcgB160
ClCG05G003990	Watermelon (Charleston Gray)	wcgwcgB164
ClCG05G003990	Cucumber (Gy14) v1	cgywcgB238
ClCG05G003990	Cucumber (Gy14) v1	cgywcgB653
ClCG05G003990	Cucurbita maxima (Rimu)	cmawcgB233
ClCG05G003990	Cucurbita maxima (Rimu)	cmawcgB319
ClCG05G003990	Cucurbita maxima (Rimu)	cmawcgB464
ClCG05G003990	Cucurbita maxima (Rimu)	cmawcgB560
ClCG05G003990	Cucurbita maxima (Rimu)	cmawcgB795
ClCG05G003990	Cucurbita moschata (Rifu)	cmowcgB219
ClCG05G003990	Cucurbita moschata (Rifu)	cmowcgB315
ClCG05G003990	Cucurbita moschata (Rifu)	cmowcgB463
ClCG05G003990	Cucurbita moschata (Rifu)	cmowcgB558
ClCG05G003990	Cucurbita moschata (Rifu)	cmowcgB792
ClCG05G003990	Wild cucumber (PI 183967)	cpiwcgB141
ClCG05G003990	Wild cucumber (PI 183967)	cpiwcgB247
ClCG05G003990	Cucumber (Chinese Long) v2	cuwcgB136
ClCG05G003990	Cucumber (Chinese Long) v2	cuwcgB240
ClCG05G003990	Melon (DHL92) v3.5.1	mewcgB335
ClCG05G003990	Melon (DHL92) v3.5.1	mewcgB385
ClCG05G003990	Watermelon (97103) v1	wcgwmB280
ClCG05G003990	Watermelon (97103) v1	wcgwmB311
ClCG05G003990	Cucurbita pepo (Zucchini)	cpewcgB138
ClCG05G003990	Cucurbita pepo (Zucchini)	cpewcgB293
ClCG05G003990	Cucurbita pepo (Zucchini)	cpewcgB559
ClCG05G003990	Cucurbita pepo (Zucchini)	cpewcgB679
ClCG05G003990	Bottle gourd (USVL1VR-Ls)	lsiwcgB016
ClCG05G003990	Bottle gourd (USVL1VR-Ls)	lsiwcgB337
ClCG05G003990	Cucumber (Gy14) v2	cgybwcgB129
ClCG05G003990	Cucumber (Gy14) v2	cgybwcgB222
ClCG05G003990	Melon (DHL92) v3.6.1	medwcgB329
ClCG05G003990	Melon (DHL92) v3.6.1	medwcgB376