ClCG05G003360 (gene) Watermelon (Charleston Gray)

NameClCG05G003360
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 3189685 .. 3191776 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTCGATAAGCAGCTGCATCTTCCATATTTTCCGGACCTCCGCTTCGGCCGGAGGTCGGACGACCTCGCCGACGACGGACTCTGCTGCCGGAATCTAGCGGTTTCGATCGATTTCAGTTCTATCACCGTTGAAGGCGAAGGCGATTGGAATAATCTGTTTGGAAATTTCTGGTTCGATATCTTCACTTGGTATGTACTGTCTTTTTGTCCGACGCATTTACAATACCTCACATTCTCGAGCATTTTTTTCCGTTTCTTTCATATTTCTATTCGTGCATTTTGTGAATTTTTCTTCCATGATTTATGCCGCTCTCAGCTATTCTGTACAAATAGTGCGACATTTGCGACTATCCAGTTTTCATAATCTGTGGGTTTTAACACGCTGGTCCGGTCTTGGGTTCTTCATCACAAATTTGGTTTAGATTCCTATTTCATTGTCGAGATTTACTGGATGTGAAATAGAGAGAAACTGTAATGTCCTGCAAGGTGGAGGTTGATTTCTGCCTTTTATGGTGGAAAATGTTTGGGAATGTGGTATAGAACAAGCACGGTAGTATGAACAATGATTGTAAATAGTAATTGATCCTCATCGTGGTGCAATTCGAAGTCCAAGCCCTCAATATGATTCCAACCTCTCGTTTCAATCATGTTAATCTGGCTTCCTTGGACACATTTGCCTAGTTTCACAAGCTTCTTGCTTGCCTAGAGTCAATAGACTCGTAGAAAAAATGAGCAATGAAACGAAGTACATAATATGAAATAATACAAATGCATAATATAAATACAAATTAATATTAGCATCAAGTGAATATTTGGATATAATTAAGTTTGTTATTAATAAAATTATTTTGATGCGATTTACTTTCAAGTGGTAATGAAGGGAAAAGGATTTTTTTAGTCCAAGGTAGTAGTAAAGAAGAGGACACAAAAAGGCAACTGGGAAGCAACAAGAAAGAGACTTAGATGTGATTTGACCAAAGGCGATTGCTTAGGAAGATACTCAACATAGAAAACCGTAAATAAATATATATTTTCGACCTAGAAGTCAGAAGTTCGGATCTTCCTAAGCCCACGTGTTGTTGAACTAACGAACAAGACAACCACTTTTGCTTGTATTGTGCCTTTGTGTCTTATTTTGCGAGAAGATCTTTTGTCTTGTTTCCTTCATGCGTTCAGTTATCTTTCTCTTGTCTTTGTGCATGCTTTGCATTTGGGGTCCAAAAAACTTTCAGGCCTCAATGTGCCTTGTGCTGTGAAGAACAGGAATTCAAGAGTTTTAATAAATGAAGCAATCGGGGCTTTCTTTTACTTCTCCATGTGCCTTGTGTATTATGAATCTCATCACTTGGGTTTGCACTTGTATTTTTGCTATGCATTTAAGTCTCAAAGAGCTGTTGTGCCTTGTACTTTATACAACATGGATTTGCAATTTTTGCCTTATAAGCTCTGAGGAAACATGACATGAAGTAAATCTAGACTAAACAGTCACCCGACAAAGACTTGAGAGTTTATCCAAATGTAGCAAGTCTATTTTTGTTATAATGCATGGCTTTCTAGGCTTCTAACTTTATATGTATTGATATATAAATTACTAGCGGTTTTATTGCTGCATGTCTGATTCACTCCCCATGAATATATTTCTCCTCATATCCTTACTCCATGGTTCTTAATTTCATTTCTTAAGTTTATTTGAGGAAATGGATGGTTTTCTTTCATATCTAAGATCACCCTCATTACACCGTATAAAGTTCTTGAAATAAAATTCAGTTCTGGACAAGTTTATTTAACAACTTATTGGATCTGATGTTATGCTTCTCCTTATTCTTGGGCAGAGCAATGGCCAACCATAGATAAAATCAGAGCACGAGCCATCTTTGGAAATCCTGGCTAGGTTTATCCCGAATGTTCCTGCTTCTGAAAAGTGACACTTTTTGGGATTCTGGCGGATCTGTGGCTGTTGATGTTGGCACTCTCGTGAGTTTCTCTCTCCTAAATGATTGTTCATCCAACAAACTACCATGGACTAACCTAATGGTCAATAAGGACCGTATAAACAATAAAGAGCTTAGAGGGAATGATTTCAAGCA

mRNA sequence

ATGCAAGTCGATAAGCAGCTGCATCTTCCATATTTTCCGGACCTCCGCTTCGGCCGGAGGTCGGACGACCTCGCCGACGACGGACTCTGCTGCCGGAATCTAGCGGTTTCGATCGATTTCAGTTCTATCACCGTTGAAGGCGAAGGCGATTGGAATAATCTGTTTGGAAATTTCTGGTTCGATATCTTCACTTGTTATCTTTCTCTTGTCTTTGTGCATGCTTTGCATTTGGGGTCCAAAAAACTTTCAGGCCTCAATGTGCCTTGTGCTGTGAAGAACAGGAATTCAAGAGTTTTAATAAATGAAGCAATCGGGGCTTTCTTTTACTTCTCCATGTGCCTTGTGTATTATGAATCTCATCACTTGGGTTTGCACTTGTATTTTTGCTATGCATTTAAGTCTCAAAGAGCTGTTGTGCCTTAGCAATGGCCAACCATAGATAAAATCAGAGCACGAGCCATCTTTGGAAATCCTGGCTAGGTTTATCCCGAATGTTCCTGCTTCTGAAAAGTGACACTTTTTGGGATTCTGGCGGATCTGTGGCTGTTGATGTTGGCACTCTCGTGAGTTTCTCTCTCCTAAATGATTGTTCATCCAACAAACTACCATGGACTAACCTAATGGTCAATAAGGACCGTATAAACAATAAAGAGCTTAGAGGGAATGATTTCAAGCA

Coding sequence (CDS)

ATGCAAGTCGATAAGCAGCTGCATCTTCCATATTTTCCGGACCTCCGCTTCGGCCGGAGGTCGGACGACCTCGCCGACGACGGACTCTGCTGCCGGAATCTAGCGGTTTCGATCGATTTCAGTTCTATCACCGTTGAAGGCGAAGGCGATTGGAATAATCTGTTTGGAAATTTCTGGTTCGATATCTTCACTTGTTATCTTTCTCTTGTCTTTGTGCATGCTTTGCATTTGGGGTCCAAAAAACTTTCAGGCCTCAATGTGCCTTGTGCTGTGAAGAACAGGAATTCAAGAGTTTTAATAAATGAAGCAATCGGGGCTTTCTTTTACTTCTCCATGTGCCTTGTGTATTATGAATCTCATCACTTGGGTTTGCACTTGTATTTTTGCTATGCATTTAAGTCTCAAAGAGCTGTTGTGCCTTAG

Protein sequence

MQVDKQLHLPYFPDLRFGRRSDDLADDGLCCRNLAVSIDFSSITVEGEGDWNNLFGNFWFDIFTCYLSLVFVHALHLGSKKLSGLNVPCAVKNRNSRVLINEAIGAFFYFSMCLVYYESHHLGLHLYFCYAFKSQRAVVP
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G003360.1ClCG05G003360.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G003360Cla97C05G084010Watermelon (97103) v2wcgwmbB229
ClCG05G003360Lsi05G018340Bottle gourd (USVL1VR-Ls)lsiwcgB335
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G003360Cucumber (Gy14) v1cgywcgB451
ClCG05G003360Cucurbita maxima (Rimu)cmawcgB233
ClCG05G003360Cucurbita maxima (Rimu)cmawcgB319
ClCG05G003360Cucurbita maxima (Rimu)cmawcgB737
ClCG05G003360Cucurbita maxima (Rimu)cmawcgB795
ClCG05G003360Cucurbita moschata (Rifu)cmowcgB219
ClCG05G003360Cucurbita moschata (Rifu)cmowcgB315
ClCG05G003360Cucurbita moschata (Rifu)cmowcgB743
ClCG05G003360Cucurbita moschata (Rifu)cmowcgB792
ClCG05G003360Wild cucumber (PI 183967)cpiwcgB149
ClCG05G003360Wild cucumber (PI 183967)cpiwcgB226
ClCG05G003360Wild cucumber (PI 183967)cpiwcgB247
ClCG05G003360Cucumber (Chinese Long) v2cuwcgB145
ClCG05G003360Cucumber (Chinese Long) v2cuwcgB222
ClCG05G003360Melon (DHL92) v3.5.1mewcgB385
ClCG05G003360Melon (DHL92) v3.5.1mewcgB427
ClCG05G003360Watermelon (97103) v1wcgwmB282
ClCG05G003360Watermelon (97103) v1wcgwmB286
ClCG05G003360Watermelon (97103) v1wcgwmB311
ClCG05G003360Cucurbita pepo (Zucchini)cpewcgB138
ClCG05G003360Cucurbita pepo (Zucchini)cpewcgB293
ClCG05G003360Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G003360Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G003360Bottle gourd (USVL1VR-Ls)lsiwcgB016
ClCG05G003360Cucumber (Gy14) v2cgybwcgB135
ClCG05G003360Cucumber (Gy14) v2cgybwcgB203
ClCG05G003360Cucumber (Gy14) v2cgybwcgB222
ClCG05G003360Melon (DHL92) v3.6.1medwcgB376
ClCG05G003360Melon (DHL92) v3.6.1medwcgB416
ClCG05G003360Silver-seed gourdcarwcgB0166
ClCG05G003360Silver-seed gourdcarwcgB0220
ClCG05G003360Silver-seed gourdcarwcgB0757
ClCG05G003360Silver-seed gourdcarwcgB0935
ClCG05G003360Silver-seed gourdcarwcgB1045
ClCG05G003360Cucumber (Chinese Long) v3cucwcgB154
ClCG05G003360Cucumber (Chinese Long) v3cucwcgB225
ClCG05G003360Cucumber (Chinese Long) v3cucwcgB246
ClCG05G003360Watermelon (97103) v2wcgwmbB237
ClCG05G003360Watermelon (97103) v2wcgwmbB242
ClCG05G003360Wax gourdwcgwgoB412
ClCG05G003360Wax gourdwcgwgoB428
ClCG05G003360Wax gourdwcgwgoB447
ClCG05G003360Watermelon (Charleston Gray)wcgwcgB160
ClCG05G003360Watermelon (Charleston Gray)wcgwcgB164