ClCG05G002060 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G002060
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	26S protease regulatory subunit 6A
Location	CG_Chr05 : 1981100 .. 1992394 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAAGCAGCTCAGAGAATGAAGCTGTTGAAGAAATTTTGTAGCCTGGTTCGCACTGCCGTCTTCTTTTGCCTCTCCTACCTCGTCTTATTGGATTGTTTGCTAACTGTATTCATTTTCGCAGGAATGAGTTTCCTCAGAGGTGTAATTGACTATATTGGGTCGATCTTCTCAGAAACGAGCTCAATTCACGATTCGCCGCAGAACCGGAGCCGCGAGGGTGCTTCAACCATGGACAGCGTTAATGGAGTTCCTGTTTCCAACGAGCGCTATGCTTCCAAGCTTAAAGGGTACTTTAATTTGTCGCAGGAGGAGATCGCCAAGGCCGTCAGGGCGGAGGAGTGGGGCATAGTCGACGACGCGATCCTGCACTACCAGAATGCTCACCGCATTCTGGCCGAGGCCAGTTCAACCGCTGTGCCTTCGTTTATCAGTTCCAGGTATTCAGAATTTTGTCAATTTGCTGGATATTTGATTCCCAGTTCATCATTTTATAAACCCACACGGTAAACTGTATTATTGCAGATGTCTAAATTTTGATGTCTAAAAGGATTGGAAAGGAATCCATATCTGAAATTTGAGAAATAAATAAGATGGAACATATGGGCAAAAATTAGAAAATATTTGGAGTTTTGGTTTGAATTATCATGTTTCGTCTTGCAAATTCTGAGAAAAATAAATAACTTGGGAATCTCTGGCATCGTCATTTGTTTTACTTTGGACATTAGTCTCTTCACAGCTTCACAGTATGCATTTGTCAGTATAATATTTAGTCATTATTTTGTAATCTTTTACCATTTGTTTTTATTTTGCGGACTATTTTTTCTGTTATTATTTTGTTATTCGTATCTGCCTTATACAACATTCTTACACTCCTTAAAGAAGATATACCTATAATTTGACGGAGTACCGGTCAAAGATCGTAGATTTTCTGTTCTTTCACTTATGCATGGTCTACTATTATTTTCTTTTCCAACAGCGAACAAGAAAAGGTGAAATCTTATAGACAAAAGATCTCAAAGTGGCAGAGTCAAGTTTCTGATAGATTAGCAACTCTAAGTATTCGAGCAGGTTCAGTTCTTGTCCTGTAATAACTCAAATCAATTTCATCAATGACAACCTTGGTTATCGGGGGCATTTAATAACTTGTCTCTTGTCTTGCAATCTTATGAATTCAGGTGTTACACCCCCAAACAAGGTAGGGTTTCATCTTTCTTAAGTGTAACTGTGCAAGTATTCAATGTAAGATTCTATGATCTTACTTTAATTAGAAACATTGCTTTGCCCCCTGGTGAGTAAATGCTTGAATATATTATAAACCCTAAACTCGGATCACTTGAGTTTCAGCTAAGAAAGAAAGAGAATTGCCAACTTTTCTGGTATCTTATAAACTAGATGCGTTAGGATTATGTTCCAAATTCCAAATTCCAATGTAAGTAGTAAGTTGTCTCTTTGGAGTTGGAAAAGTAGACTTTACAATCATTTGGCTGCATGCTTGATGTTTATTACCAAGCATGAGAGAACTGTTGGCTATCTTATGAAAAAATATATTTCTTCTTTTGTTTTTCATATCTGAGGTATGGTTCAGTTAGTAATATAAAGATCTCATATTCTATGTATTTCTTTATTTCAGGTTCAAATTCCATTTTGGACCCTAAATTCTCTGTTAATTCTATTTTAGTCCTTAAACTTTCAAAATGTCAACTATGGTACTCAAGCTTTCATGTTTGTTCCAGTTTGGCCCCTCAACTTTCATAAAGTCTATTTTAGTTCCTAAACCTTTTTAAAGCAACTATTTTGGTCCATGTTATGTTACTTTTCCATCTAATTTTCACTTGTTCAATGCTCATTTCTAATCTATGTGACTTGAAGTTATGCTCATTAAACATGTTAGTACACATACTTAGAGGTTATATCAATAAGTTGTTAAAGCCAATCAAAATAAGGAATACAATGATTGATTATTATTATTATTTTCTATCTATTTATTTCTTTATTTATTTTTCTTTCTCTAAGACTAAGGATTAAAATAGACATTTTAAAAGTCTAAGGACCAAAATGAAACAAATTTGAATTTCAGGGAACATTTATTTTATTAAATTTTATTTCAGAGCTCCTCAAATCATGTGCAAAGAGCTGGAATCACTTCAACAATCCCAAATAAAAAGCCGGTGTTAAGGAGCTCTTCTCATGGTGGTGCAAATAATCCAATAACGAGAAGTCAACCCACTAATGTTGGAACTTCAAAATCTATTCAAGAGGTTCCTGATGGATATGATCCGAAATTGGTAGAAATGATAAACACTACTATAGTAGATCGAAGTCCTTCTGTAAAATGGGACGATATTGGTAGTACATTTTTTCCCCTTCAACCTCTCGTTTACTTCATTACATTTCATTAATTTTCTTTTGTACTTGTACTCTCTCATTGGACACTGAATGGTCTGGTTCAATTGTAGCTGGACTTCAGAAGGCAAAGCAAGCTTTATTGGAGATGGTTATTTTGCCCACAAAGAGGAGAGACTTATTTACTGGTCTTCGAAAGCCAGCTAGAGGTAGTGCTTTTGGGAACTGTCAATATACTGCTCTCCCACTACTTTCGAGAGTGAAATAAAGTGCCATACCATCTTACACAAAATGCATTCTTCGTCAAGATTCATGGGCCTGGACATCATACATTACTTCAAGATTGTTGTTCATGTTGAAACAATAGGAATGTTTACATTTGATTTGAATGCTCCGTACATGGGCAATTCAAACTAAAAATTTATATCTGATTAGAGGAATCATAGGTTGCAAGACAAGGCACAAGGTACAGCAGACCACATGGGGTGCTGAAATAGTACTCAACACCTACACAAACTTCAGTCTGTTCTTGGTCTTTTCTAACATCTCAACTTGTCTGAGAAGCCTGTTGCAATCGGCAATCCTAGTCAAATTGCTGCAATTTCTTATCATTTTCACTTGGTTGGATTCTTCAGTTTCTAGCTAGTCATTCTCCATATAATAACCAAATCGATCTTAAATTTTATTAAATATGTAGAACTTTCATTTGTGGAGGCCTCCTATGAAAAGACCTTTAGGGGGTGTTTGGGGAACTATAATAGGATAGACTTGTATTGGAATGTAATCCGAAATGAATGTTTGGATTGAACGTTTTGGGCCCGATTTGTAATACAAAAGTCATTCCGTTCCAACAGTTTTCAACCCAATCCTATTTCCCACCGCTTCCGTGGTTCGCGATCTCATTTTCGTTTATTTCTTAAGTGTTCACGCATTCCAATACTCCTTTGGTTCCCAATAATCCTATTACATTCCAGCTCTCCAAACAACCCCTTAATTTTTTGGAGGTCTAAGGGGTATCTGTGTGTTAAAAGTTAAAGCTTAATTGTCAAATTGACATTTACTGCTTTAAGTATTAATCTGTCGCTGTAACATATCTCAATACCAACACAATCTTAAGAGTCAAGCATATTCATTTTAATATTTTTTATCTTCTAAACAACTAGTCAACTACTTCGTCTTCGTATCAAGTTCACCCTTTTTCTGAAGATTATAATGTTTTAGAGTCGAGCTTCTAGAAATTTTTGCGACTCTAATCTCGTTAATCATTTTTGTGGATCCAACATTATCAATATTTCCTCAGGTCTTCTTCTCTTTGGTCCACCCGGTAATGGGAAGACTATGCTTGCTAAAGCTGTAGCTTCAGAATCAGAAGCCACTTTTTTTAACTTGTCAGCCGCATCCTTCACATCAAAATGGGTACATCTCGATTCCACTTCAAGAATTATATTTTCTTTGTGGAAAAAAATTCTTCCCCATTTTTATCCTTTCTAGTTATTATCCTTGCAAATTCTAATAAGTTATATTTGCTCCAAGTTAGGGGAAAGTGAAAAGCTTGTACGGACTCTCTTCATGGTTGCTAAGTCCAGGCAGCCCTCCGTAATTTTCATGGATGAAGTATGTCTCGTTCTCTCGCTAAACCATTATTTTAAGGATGAGTTAATTGTACATTGTTTTTGTAAGTTTAGTTCTTCTGTATGTTTTGTTTTGAGTGCAATGTAGTTTTTGGTGATTTGACATAAAAGTAGGTGAATCGCAGAATGCTTTTAAAAGGTCAGGTATTTTAGTATTCTTAGCTTAGGTCCTGGACAACAATTGAACTTTTGGATGCAGAAAATAGTTTTTGGTGTAGCATAATTAGCAACTATTTTGTACTTTTCATTTGTATGTTTAATTGTTTTAGTTAGTAGTTCTAGTTGTTTACATAGTTAGTAGGCTGTAGATTAACTCATTAGGGTTAATCATTGACTTACACTGATTCGTAATAAACATTTCATTTGAGGATTCTGGGGTATTTTCTCCTTTGATGCTTAGTTGTTCTATCAAATTGGTATTAGAGCAACCCTCAACCTTATGAGAGGGCGATGGCTAGGAAGATGGTAGTCACTAGGCACCTTCAGTTGTGACACATTCAGTCTGGTAGGGAGTTTGAAGTGGAACTCCACTAAAATTGGTAACTAGACGCTTGCTGTCAGTTGATGCGTATCTTGGATATATTCAGAGAAATTTGATGAAAGTTCAATGTATGGTGGGTACAATGTTCAAACAATTGGATCAAGAATGATCTGTATTATCAGCAAGAATGCTCCAAAAACAGAGAACTGCCTTCTAGAATTGTTTAGGAACCCTTTTCATGATGATAAACTCCAACAATTGGATCAATAATGATGGTAAATTTACACCAAGAGAAAGCTATGTATGGTGTTCAAATCCGTAGCTTTGTAGTTGAAGATCCGCCGGTTTCATTCAAGCCAGTTAAGCCAAAAGAAAGCTTTAACAAAGCAGTTCCAAATGACCTCTTTCTCCTGTCTGAAAGGGTGACCAGTGAGGAGCACCTGAAGGAGGATAAGTGGATCATCGGGAAAGACCATGTGGTAATTGAAGGCCCCCGTAATTTAGACCAAAAAGTGTGGACATATTCACAGGTGACAAAGCGGTGCTTAATAGTCTTACTGTTCTTGTGACAGAGGGTACTCTAGCTAGGGGGGGAGATGATCCAAGGGGCATTTTTTATCAGCACATCAGCAGTGTTAATACATCCACGGCTGTATTCCCACAGGAAGAATTTTATCTTTTTGAGGATGAAAGGTGATTCCAATTTTTCCAAAGATGAGGAGTCTTGTTTATGGATTTTTGGAAGACTTACCAGAAGGATGTTAGAGTTACGATCAAGGAGCTCCTCCTTTTGTGAGAAGGGCTGTTTCTTATGGTTTGTTGCGGTGTGTGTCTTGTTATGGTCTTTGGAGTGAGATAAGTAAGTAAATAACAAATTGTTATGGTCTTTGGAGTGAGATAAGTAAGTAAATAACAAACTTTTTAGAGGTGTGGAAAGGAAAATTGGGGCAATTTTTTTCTCCCCTTCTCCAAATAGGGGATGTAGCATAATTAGCAATAATTTTGTAATTGTGGACAAATAAGGGAAAGTAAGGAGAAGAGAAAAGTAGAGATATTCAATTGTTACTTTTCTCTTCTCCTTACTTTCTTTTGTTTCACAACACATTATCAACACGAGTTTCTACCACTTTGAAGAGTATCTACTAACTAAAGATTGGAGTCAATTGGCGTTACATATATTCACTCTCTACTTTTCTCGTCTCCGTACTTTCCCTTGTTTCACAACAGTAATTTCATTCCAATGGTTAATTGTTTTAGTTAGTTGTCTACCTAGTTAGTATGTTGTAGACTAACCCATTAGTCTCTTATAAATAGATGGTTACTCTTTTGTTAATGACTTACCTTTTGATTCATAGTAAACATTTCTTTAAGGATTCACAGAGGCTTTCTCCTTTGATACTTGGTTTCATCAATTTTCCCTTTTTTCCTGTTTCGTTGAGTTGCTTAGACTAGAGAACTTGAAACTTGAGCTATTATATTTATATATTAGTGTATATTTTGTTATTACCTTTACTATGAGTCAGTAACGTCTCACATAAATTTCATTCTTGTTAATAACTATTTCAAAATTTAGTAGAATTGTTTAATCCTCTAGAGTTTTCCCTTTATTTGAATTAGAATCTCATTGACCTGCAAAGACTAGTTGATTTGTCAAAATCTATTTTTATCTGTTCAATATATAAACTGGGACTTGATGTACAGAATGCCAATGCCATGTAAAAAGAGTAATATCCATATAAATTATCGGAAAGGAAACATCCCGCAGTAAAAATACTGCTAAGTGAGGTGCCTTTCAAAGATGCAAGTCCTATTGTCATAGCAAAAAGAGATTGACCCAAAACTGGAACTGGATCTTTACTGGTTAAGCTATTAAGTATTAATAGTTCATTATTTAGCCTCGTAGTCAAATAGGTACTTCAAACTGACAATCATTTAGTATTAAATCAATAAATGCTAAGCATATCCTCTACCGATGTTTTTTGATTTCAAGCAATCAACATTTTATTTCACAAGTTATTTTCTGTGTGAAACACAATTGATGATATTCAGTTGATTATCTCATCTCCCCCCTTCTTTTGTAATCTATTGTTTCTTACCAAAAAAAAAAAAAAAATTGATGACATTCTGATTTTCTTTTTAATTTGACTGTACAGATTGATAGTGTCATGTCATCAAGGCATGCTGGTGAACATGAAGCTAGCAGGAGGCTGAAGTCTGAGTTTCTTGTACAGTTTGATGGAGTAATGTCCAATTCTACTGATCTTGTAATCGTTATTGGTAAGCTTTGATCTAGTCTAGCTACGTCTGTTCTGCTTCTTTGCAAATTCTTTGGTGTACATGGAAGGAAAGGAATAACCTAATTGTTATACTGATTGACTTTTAAACTTTTTGATTTCCAAGCTTGGTCCAGAATCCACGAAAAATTTGTAGGGGCTATGTGCTTCCTATAGCCAATGACTTGCAGTTGCTTGTTTGAGAGCTCAAAACATATAACATTATGTACCAGTTTAGGAATTATGATATGATCCACTAAACGCTTTGCAGTTGATGTAATATTATCTATTAACACTTGCATAATGTTTGTCAGTCTCCATATTTATTTTTACCTTTTATTTTCAATTTACATTTTGTATATTATTATCTGTTTGTTCTTTTACTTCCACATAGGACATGAAGTAACTTACATGCGCCTGCAGTCTGAAAAATTTTCTTTTTTATATAATGAAATGATAGTTCGCAACAACCTGAAAGAAAATCATGTGCTGTCCTTTTGTTATTAATATTATGAATTCATGAGCTAGTTGAAATCCATGCAAACTTTTAGATTGTATTTTGATACGAGCTAAGTGGCCGGTATAAGCATGCTGGGTTTTTCTTGCTAGGTTGTGTTTTAAGTTTCTCTCTTTTCCTTCGGAAATACAAGGTTTTATGCTTATTGTGCAGGTGCTACTAATAAGCCCCAAGAACTGGATGATGCAGTTCTCAGGAGATTGGTATGTGAATTTATAATGGTTCTGTCTTTATTTTTTATTTTTTACGGTGACTCCCAAAAAGATGAAACCAAGCAGATAATTACTAAAGTCTCATGAAACAAAATCTCGCAAAGAAGATTGAGTCTAATGCTATCATTGGCCTCTTTTCAAGATCTATCCATTTTTCTCAAAATTCAATTGTCCCTTTCTAACCAAATACCCCAAATTATGGCAAAGCAACGAGCTTGCCAAATTATCCTTCGCTTATTCCAAAACAGGGGATGCAAGCAGATGTAAGTGGATTCCAGAATGCCGTTTATTTTCTGCATTCTGATTTTACCTCTCGCATCCATTCATAAGCACCCCATTTCAAAAGGGAAAGGGGAAAAGAACTCAAACTTTATTGTTTCAAGTAATATGGTATACAATTGGAGATGTTTTGGTAACTTCTCTGCCATTTCGAGTCTCTCTTTTATAGATTTTATTGTTTCGATGACATGGTTCTTAGTTCCCCCTCTTTTGAAAGAAAGGGACTGGACCTTGATGATTTATGTGGTGCAAGCTGATAGGCAATACTTAAGGTAGAGAAGAATGCTTCCAAAGTAAGTGGCCGGCTTTTGATTTCAGGCATGTCAAGCATTTCCTTATGTAGCACTGGCAATTGTAGCTATTTCATGTGTAAGCTCTTAAGCGCTACTTCACTTATTTTTTCCAAGAACTTTCAAGTGGATCATCAGGAAAGACCATGTGGTAGTTGAAGTGAATAGCTCCCGAGTATGTTTCAATTTTTATCGTAGCCTGCCACAAGGTGAGTTTAGTGGTCAAAATGGCGTATACTTCTGCCAATAAAATCGAGGTTTTATCATAGCCTGCCACAAGGCGAGTTTAGTGGTCAAAATGGCGTATACTTCTGCCAATAAAATCAAGGTTTTATCATAGCCTGCCACAAGGCAAGTTTAGTGGTCAAAATGGCGTATACTTCTGCCAATAAAATCAAGGTTTTGAGATCACAGATGAAATTAAGTTAAAGGATCATAATATAGACAGCTTTGAATCTTGCGTAGGTGGAAAGGTTAGAGTTTTTAGTTCTACAAAAATCATTATTATACATTGATAAAAGCACCCTTTTGAAGATGAACAAGAATATGTCAATATGGAATTGCTCTCTCTCTTATTCTCACTCACACACACTCGTGAGGGCATGGATATGTGGTTAGTGCAGTGTGTGACAACATTAGCCAGATGCAACATCCTTTCTGTGATTACTTCATTAAAAGCTTTCTATGTATTTTAAATTTAAACTGATTTCTCATTCAAATGCCCCTTCCCCCCACAACAGGTGAAGAGAATTTACATTCCCTTGCCAGATGAAGACGGTAGAAGACTTCTTCTCAAGCACAACCTCAAGGGACAGTCATTTTCTCTTCCAAGTAAGAATGGGGATTTAGTGAAGTTCCAGCTAGATATTTCCTTAAAATATGTATCAACTTTGTTTATTTATTTATTTATTTTTTGAAAAGAAAATATGTATCAACTTTAATGCAAACATTTGATGTTCTCTAACTATATGGTGTATGTATAACACTTTTTTTCCCCTACTAAGATGCATATATAAGACTAATAGAAGGTCATTCGATTCCATAAATATTGTAAAGTTTGCTAGGAGCTAAAGGAGGAAGTTCTAGTTTATGAGTTAAAAGTACGGGAAGGACTCACCTAAATTATTAAATATTCTACAATTTTAACTCTTTATTTTAAGATAGGTTGATTATCCTATGGGATTAGTCAGTAGCCAATGGTTGTGACTGTGGACTTTATACCTCTCCCAACGGTGAACAGTGCCACTTGGTCCTATACCTATTTTTTTCATTATTGTCTTTTATATTTATCCAAATCCAGCCTTTTATTATCATTAATACTTCTGGGGTTGATTGATTAATTTAGTATGCTAGTTAGAATTGTATCTCCTGTTCTGATCGTATATTATTGTAGTACATGCTTTCTTTTGTTGATGGAATGCGCTCGTCTGCCCTATATGTTTGTCCCTTCAGCCGAACCATTAAATCTTTTTACTAATTTACCAAAACTAACATATGTCTCATTTTCCTTGACAGCTAGAGATCTAGAAAGACTAGTTATACAGACTGAAGGTACTATATCTTTTTCTTGCCTGATATTTTTCATCTTTCCGTACTTCAATAGGGAAAAATTAGCATTTCAAGAATGGCATGGAAAGGGATGAGCTAGATAACCGTGTGCATCTGATGATCTTACACTATCCATCCAGTGTCTTTGTGCATCTGGGAGACTTTAATAGGTTTTTTTTTTTTTTTTTTCCTTCCTTCCTTTAAAAAAAAAAAAATAATGGAAACAAGACTTTTCCATTGATAAAATGAAAAGAGCCAAAAGCTCAAAGTACAATTAAAAAAAAAAGAGAAAGAATACAACATAGTGGTTGAAATAACAAGAACACAAATAAAAAGACTAAACTTTGGAAACAAAAGAAATTGAATTACGAGCACCCAAAGAACAAAAGAACCAAAACAAACAGAACTTTGAGCTTTTGCTTGAAAACAAGCAACCAAATTTGTATTGAGAAGAATAAACATACAAAAGTTAAAAGTAATCGTTAACTTCTCGAATAAAAAATACAGAAGTTAGAAGTTAGAACTAGAAGGGCCATGCTGAAAAAGGGGAACAAAACAAAAGGAGAGTATATATCTGGTCGGGTTTAGCAGAAAAATAAGGAACATTTGCAAGTAGGAATTCACATGGTTAGTGATCTAGAATAAGGTTGCATAGGAATGCCCTGAAAAAAGCTAGAAACAGAAGCGGCATTCCCACTGAGAACACTTATCCTACAAAACCCTTCTGGAGAGTGAATTTGAACAACTTGAAGTTTGAGCCGAAAAGCTCATGGTATTATATACATGTACAGGATACTCTGGAAGTGATCTACAAGCCTTGTGCGAGGAAGCTGCAATGATGCCAATTAGGGAGCTAGGTGGGAACATTCTCACAGTAAAGGCAGATCAGGTGACACATAAAACTTGTGGACTTTTTTCTTTCTGTTTCACTAAACATAGGACTTATGAGTTTCAATTAGTCAATTCATATCACATCATGTGTAATTATTTGCAGAACAAAGCTCGTTGATCAATAACTTTTTCGCTTTTGTAGTTTAAACTTCTATATTATATTGCTAGAGAAACCTCATTTTGCACTCTACGGGATCCGCAAACTTCGATTATCATATCGTAATCTAACCTGTTACAGGGTAATCTCATGCAAACATTGTGTCTAATTCCGTTGAGTGATTATAGAGAATGTGATGTATAGGAAATCTGTAGCATGTTGGGAGACTCATGCGTTTCAAGCTAACCGAGAGTTGTCTCCTTTCCTTTCATTTTGCGCTATTGGGAATCTGTGAACTTGAATTATCATCAATTATCATATCATAATCTTACCTGTTACAGGGTAATCTCATGCAAACATTGTGTCTAAAAATTTTACCTGTACCATCATTTCATTGAAATTTTATATTTTGTGTGCACCAGATAAGGTCATTAAAGTATAGAGATTTCCAGGAGGCAATGAAAGTCATAAGACCCAGTTTAAACAAAAGCAGGTGGCAGGAGCTTGAAGAATGGAACCAAAGTTTTGGATCCAATTAGATATGCAGAAATTCTCTATTTTTTAGAGACAGTTGTAGTGAAGTGAACTGAAGGGAACCCTTCGCTACTCTATGTATTATATTGTACAGCCTTATCTCGAATAAGAACTTCTAAATTGTTCGATTCTTTGGTTTCTTGTTTGAGATGGCCAAAATCTTAATATGGGAGAATAATTTGTATGAAAGGAAAAAA

mRNA sequence

CTGAAGCAGCTCAGAGAATGAAGCTGTTGAAGAAATTTTGTAGCCTGGAATGAGTTTCCTCAGAGGTGTAATTGACTATATTGGGTCGATCTTCTCAGAAACGAGCTCAATTCACGATTCGCCGCAGAACCGGAGCCGCGAGGGTGCTTCAACCATGGACAGCGTTAATGGAGTTCCTGTTTCCAACGAGCGCTATGCTTCCAAGCTTAAAGGGTACTTTAATTTGTCGCAGGAGGAGATCGCCAAGGCCGTCAGGGCGGAGGAGTGGGGCATAGTCGACGACGCGATCCTGCACTACCAGAATGCTCACCGCATTCTGGCCGAGGCCAGTTCAACCGCTGTGCCTTCGTTTATCAGTTCCAGCGAACAAGAAAAGGTGAAATCTTATAGACAAAAGATCTCAAAGTGGCAGAGTCAAGTTTCTGATAGATTAGCAACTCTAAGTATTCGAGCAGGTTCACCGGTGTTAAGGAGCTCTTCTCATGGTGGTGCAAATAATCCAATAACGAGAAGTCAACCCACTAATGTTGGAACTTCAAAATCTATTCAAGAGGTTCCTGATGGATATGATCCGAAATTGGTAGAAATGATAAACACTACTATAGTAGATCGAAGTCCTTCTGTAAAATGGGACGATATTGGTACTGGACTTCAGAAGGCAAAGCAAGCTTTATTGGAGATGGTTATTTTGCCCACAAAGAGGAGAGACTTATTTACTGGTCTTCGAAAGCCAGCTAGAGGTCTTCTTCTCTTTGGTCCACCCGGTAATGGGAAGACTATGCTTGCTAAAGCTGTAGCTTCAGAATCAGAAGCCACTTTTTTTAACTTGTCAGCCGCATCCTTCACATCAAAATGGTTAGGGGAAAGTGAAAAGCTTGTACGGACTCTCTTCATGGTTGCTAAGTCCAGGCAGCCCTCCGTAATTTTCATGGATGAAATTGATAGTGTCATGTCATCAAGGCATGCTGGTGAACATGAAGCTAGCAGGAGGCTGAAGTCTGAGTTTCTTGTACAGTTTGATGGAGTAATGTCCAATTCTACTGATCTTGTAATCGTTATTGGTGCTACTAATAAGCCCCAAGAACTGGATGATGCAGTGAAGAGAATTTACATTCCCTTGCCAGATGAAGACGGTAGAAGACTTCTTCTCAAGCACAACCTCAAGGGACAGTCATTTTCTCTTCCAACTAGAGATCTAGAAAGACTAGTTATACAGACTGAAGGATACTCTGGAAGTGATCTACAAGCCTTGTGCGAGGAAGCTGCAATGATGCCAATTAGGGAGCTAGGTGGGAACATTCTCACAGTAAAGGCAGATCAGATAAGGTCATTAAAGTATAGAGATTTCCAGGAGGCAATGAAAGTCATAAGACCCAGTTTAAACAAAAGCAGGTGGCAGGAGCTTGAAGAATGGAACCAAAGTTTTGGATCCAATTAGATATGCAGAAATTCTCTATTTTTTAGAGACAGTTGTAGTGAAGTGAACTGAAGGGAACCCTTCGCTACTCTATGTATTATATTGTACAGCCTTATCTCGAATAAGAACTTCTAAATTGTTCGATTCTTTGGTTTCTTGTTTGAGATGGCCAAAATCTTAATATGGGAGAATAATTTGTATGAAAGGAAAAAA

Coding sequence (CDS)

ATGAGTTTCCTCAGAGGTGTAATTGACTATATTGGGTCGATCTTCTCAGAAACGAGCTCAATTCACGATTCGCCGCAGAACCGGAGCCGCGAGGGTGCTTCAACCATGGACAGCGTTAATGGAGTTCCTGTTTCCAACGAGCGCTATGCTTCCAAGCTTAAAGGGTACTTTAATTTGTCGCAGGAGGAGATCGCCAAGGCCGTCAGGGCGGAGGAGTGGGGCATAGTCGACGACGCGATCCTGCACTACCAGAATGCTCACCGCATTCTGGCCGAGGCCAGTTCAACCGCTGTGCCTTCGTTTATCAGTTCCAGCGAACAAGAAAAGGTGAAATCTTATAGACAAAAGATCTCAAAGTGGCAGAGTCAAGTTTCTGATAGATTAGCAACTCTAAGTATTCGAGCAGGTTCACCGGTGTTAAGGAGCTCTTCTCATGGTGGTGCAAATAATCCAATAACGAGAAGTCAACCCACTAATGTTGGAACTTCAAAATCTATTCAAGAGGTTCCTGATGGATATGATCCGAAATTGGTAGAAATGATAAACACTACTATAGTAGATCGAAGTCCTTCTGTAAAATGGGACGATATTGGTACTGGACTTCAGAAGGCAAAGCAAGCTTTATTGGAGATGGTTATTTTGCCCACAAAGAGGAGAGACTTATTTACTGGTCTTCGAAAGCCAGCTAGAGGTCTTCTTCTCTTTGGTCCACCCGGTAATGGGAAGACTATGCTTGCTAAAGCTGTAGCTTCAGAATCAGAAGCCACTTTTTTTAACTTGTCAGCCGCATCCTTCACATCAAAATGGTTAGGGGAAAGTGAAAAGCTTGTACGGACTCTCTTCATGGTTGCTAAGTCCAGGCAGCCCTCCGTAATTTTCATGGATGAAATTGATAGTGTCATGTCATCAAGGCATGCTGGTGAACATGAAGCTAGCAGGAGGCTGAAGTCTGAGTTTCTTGTACAGTTTGATGGAGTAATGTCCAATTCTACTGATCTTGTAATCGTTATTGGTGCTACTAATAAGCCCCAAGAACTGGATGATGCAGTGAAGAGAATTTACATTCCCTTGCCAGATGAAGACGGTAGAAGACTTCTTCTCAAGCACAACCTCAAGGGACAGTCATTTTCTCTTCCAACTAGAGATCTAGAAAGACTAGTTATACAGACTGAAGGATACTCTGGAAGTGATCTACAAGCCTTGTGCGAGGAAGCTGCAATGATGCCAATTAGGGAGCTAGGTGGGAACATTCTCACAGTAAAGGCAGATCAGATAAGGTCATTAAAGTATAGAGATTTCCAGGAGGCAATGAAAGTCATAAGACCCAGTTTAAACAAAAGCAGGTGGCAGGAGCTTGAAGAATGGAACCAAAGTTTTGGATCCAATTAG

Protein sequence

MSFLRGVIDYIGSIFSETSSIHDSPQNRSREGASTMDSVNGVPVSNERYASKLKGYFNLSQEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASSTAVPSFISSSEQEKVKSYRQKISKWQSQVSDRLATLSIRAGSPVLRSSSHGGANNPITRSQPTNVGTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLVIVIGATNKPQELDDAVKRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQELEEWNQSFGSN

Homology

[Close]

BLAST of ClCG05G002060 vs. Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=2)

HSP 1 Score: 320.1 bits (819), Expect = 4.0e-86
Identity = 175/339 (51.62%), Postives = 231/339 (68.14%), Query Frame = 1


Query: 129 ATLSIRAGSPVLRSSSHGGANNPITR-SQPTNVGTSKSIQEVPDGYDPKLVEMINTTIVD 188
           A++S  A +P   +      N+   + S PT     K   +V    D  L  +I   IVD
Sbjct: 272 ASVSRPAANPATSTHKAAPKNSRTNKPSTPTPAARKKKDTKVFRNVDSNLANLILNEIVD 331

Query: 189 RSPSVKWDDIGTGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAK 248
             P+VK+DDI  G + AKQAL E+VILP+ R +LFTGLR PARGLLLFGPPGNGKTMLAK
Sbjct: 332 SGPAVKFDDIA-GQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAK 391

Query: 249 AVASESEATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAG 308
           AVA+ES ATFFN+SAAS TSK++GE EKLVR LF VA+  QPS+IF+DE+DS++  R  G
Sbjct: 392 AVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREG 451

Query: 309 EHEASRRLKSEFLVQFDGVMSNSTDLVIVIGATNKPQELDDAV-----KRIYIPLPDEDG 368
           EH+ASRRLK+EFL++FDGV S+  D ++V+GATN+PQELDDAV     KR+Y+ LP+E+ 
Sbjct: 452 EHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLRRFTKRVYVSLPNEET 511

Query: 369 RRLLLKHNLKGQSFSLPTRDLERLVIQTEGYSGSDLQALCEEAAMMPIREL-GGNILTVK 428
           R +LLK+ L  Q   L  ++L +L   T+GYSGSDL AL ++AA+ PIREL    +  + 
Sbjct: 512 RLILLKNLLSKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMS 571

Query: 429 ADQIRSLKYRDFQEAMKVIRPSLNKSRWQELEEWNQSFG 461
           A ++R++K  DF E++K I+ SL+    +    WN+ FG
Sbjct: 572 ASEMRNIKLSDFTESLKKIKRSLSPQTLEAYIRWNKDFG 609

[Close]

BLAST of ClCG05G002060 vs. Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 4.4e-85
Identity = 181/370 (48.92%), Postives = 241/370 (65.14%), Query Frame = 1


Query: 99  PSFISSSEQEKVKSYRQKISKWQSQVSDRLATLSIRAGSPVLRSSSHGGANNPITRSQPT 158
           P  ISS+   +VK+  +  S      +    + S R   P   S+      N    ++PT
Sbjct: 231 PPSISSNSYSRVKAAPKSGSLGNRIPNCTGVSSSARQAGPNAPSNRGAAGKNNTRTNKPT 290

Query: 159 NVGTSKSIQEVPD--GYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILPT 218
              T+   +++ +    D  L  +I   IVD  P+VK+ DI  G   AKQAL E+VILP+
Sbjct: 291 TPTTAVRKKDMKNLRNVDSNLANLILNEIVDSGPTVKFADIA-GQDLAKQALQEIVILPS 350

Query: 219 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKL 278
            R +LFTGLR PARGLLLFGPPGNGKTMLAKAVA+ES ATFFN+SAAS TSK++GE EKL
Sbjct: 351 IRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKL 410

Query: 279 VRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLVIV 338
           VR LF VA+  QPS+IF+DE+DS++  R  GEH+ASRRLK+EFL++FDGV S   D V+V
Sbjct: 411 VRALFSVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLV 470

Query: 339 IGATNKPQELDDAV-----KRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQTE 398
           +GATN+PQELDDAV     KR+Y+ LP+E+ R LLLK+ L  Q   L  ++L +L   TE
Sbjct: 471 MGATNRPQELDDAVLRRFTKRVYVSLPNEETRLLLLKNLLSKQGNPLNEKELTQLSRLTE 530

Query: 399 GYSGSDLQALCEEAAMMPIREL-GGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQ 458
           GYSGSD+ AL ++AA+ PIREL    +  + A ++R++KY DF  ++K I+ S++ S  +
Sbjct: 531 GYSGSDITALAKDAALGPIRELKPEQVKNMAASEMRNIKYSDFLSSLKKIKCSVSPSTLE 590

Query: 459 ELEEWNQSFG 461
               WN+ FG
Sbjct: 591 SYIRWNKEFG 599

[Close]

BLAST of ClCG05G002060 vs. Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.7e-84
Identity = 177/339 (52.21%), Postives = 231/339 (68.14%), Query Frame = 1


Query: 130 TLSIRAGSPVLRSSSHGGANNPITR--SQPTNVGTSKSIQEVPDGYDPKLVEMINTTIVD 189
           T + +AG+    +    G NN  T   + PT     K ++ + +  D  L  +I   IVD
Sbjct: 260 TSARQAGAHTPSNRGATGKNNTRTNKPATPTTAVRKKDMKNLRN-VDSNLANLILNEIVD 319

Query: 190 RSPSVKWDDIGTGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAK 249
             PSVK+ DI  G   AKQAL E+VILP+ R +LFTGLR PARGLLLFGPPGNGKTMLAK
Sbjct: 320 SGPSVKFADIA-GQDLAKQALQEIVILPSIRPELFTGLRAPARGLLLFGPPGNGKTMLAK 379

Query: 250 AVASESEATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAG 309
           AVA+ES ATFFN+SAAS TSK++GE EKLVR LF VA+  QPS+IF+DE+DS++  R  G
Sbjct: 380 AVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREG 439

Query: 310 EHEASRRLKSEFLVQFDGVMSNSTDLVIVIGATNKPQELDDAV-----KRIYIPLPDEDG 369
           EH+ASRRLK+EFL++FDGV S   D V+V+GATN+PQELDDAV     KR+Y+ LP+E+ 
Sbjct: 440 EHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVALPNEET 499

Query: 370 RRLLLKHNLKGQSFSLPTRDLERLVIQTEGYSGSDLQALCEEAAMMPIREL-GGNILTVK 429
           R +LLK+ L  Q   L  ++L +L   TEGYSGSD+ AL ++AA+ PIREL    +  + 
Sbjct: 500 RLVLLKNLLSKQGNPLSEKELTQLSRLTEGYSGSDITALAKDAALGPIRELKPEQVKNMA 559

Query: 430 ADQIRSLKYRDFQEAMKVIRPSLNKSRWQELEEWNQSFG 461
           A ++R++KY DF  ++K I+ S++ S  +    WNQ FG
Sbjct: 560 ASEMRNMKYSDFLGSLKKIKCSVSHSTLESYIRWNQDFG 596

[Close]

BLAST of ClCG05G002060 vs. Swiss-Prot
Match: SPAST_RAT (Spastin OS=Rattus norvegicus GN=Spast PE=1 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 3.2e-83
Identity = 170/329 (51.67%), Postives = 228/329 (69.30%), Query Frame = 1


Query: 142 SSSHGGANNPITRSQP----TNVGTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDI 201
           +++H G + P   ++P    T V   K ++   +  D  L  +I   IVD   +VK+DDI
Sbjct: 251 ATTHKGTSKPNRTNKPSTPTTAVRKKKDLKNFRN-VDSNLANLIMNEIVDNGTAVKFDDI 310

Query: 202 GTGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATF 261
             G + AKQAL E+VILP+ R +LFTGLR PARGLLLFGPPGNGKTMLAKAVA+ES ATF
Sbjct: 311 A-GQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATF 370

Query: 262 FNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKS 321
           FN+SAAS TSK++GE EKLVR LF VA+  QPS+IF+DE+DS++  R  GEH+ASRRLK+
Sbjct: 371 FNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKT 430

Query: 322 EFLVQFDGVMSNSTDLVIVIGATNKPQELDDAV-----KRIYIPLPDEDGRRLLLKHNLK 381
           EFL++FDGV S   D V+V+GATN+PQELD+AV     KR+Y+ LP+E+ R LLLK+ L 
Sbjct: 431 EFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLC 490

Query: 382 GQSFSLPTRDLERLVIQTEGYSGSDLQALCEEAAMMPIREL-GGNILTVKADQIRSLKYR 441
            Q   L  ++L +L   T+GYSGSDL AL ++AA+ PIREL    +  + A ++R+++  
Sbjct: 491 KQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLS 550

Query: 442 DFQEAMKVIRPSLNKSRWQELEEWNQSFG 461
           DF E++K I+ S++    +    WN+ FG
Sbjct: 551 DFTESLKKIKRSVSPQTLEAYIRWNKDFG 577

[Close]

BLAST of ClCG05G002060 vs. Swiss-Prot
Match: SPAST_MOUSE (Spastin OS=Mus musculus GN=Spast PE=1 SV=3)

HSP 1 Score: 309.7 bits (792), Expect = 5.4e-83
Identity = 173/343 (50.44%), Postives = 232/343 (67.64%), Query Frame = 1


Query: 128 LATLSIRAGSPVLRSSSHGGANNPITRSQP----TNVGTSKSIQEVPDGYDPKLVEMINT 187
           L+ +S     P   +++H G   P   ++P    T V   K ++   +  D  L  +I  
Sbjct: 270 LSMVSGARPGPGPAATTHKGTPKPNRTNKPSTPTTAVRKKKDLKNFRN-VDSNLANLIMN 329

Query: 188 TIVDRSPSVKWDDIGTGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKT 247
            IVD   +VK+DDI  G + AKQAL E+VILP+ R +LFTGLR PARGLLLFGPPGNGKT
Sbjct: 330 EIVDNGTAVKFDDIA-GQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKT 389

Query: 248 MLAKAVASESEATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSS 307
           MLAKAVA+ES ATFFN+SAAS TSK++GE EKLVR LF VA+  QPS+IF+DE+DS++  
Sbjct: 390 MLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCE 449

Query: 308 RHAGEHEASRRLKSEFLVQFDGVMSNSTDLVIVIGATNKPQELDDAV-----KRIYIPLP 367
           R  GEH+ASRRLK+EFL++FDGV S   D V+V+GATN+PQELD+AV     KR+Y+ LP
Sbjct: 450 RREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLP 509

Query: 368 DEDGRRLLLKHNLKGQSFSLPTRDLERLVIQTEGYSGSDLQALCEEAAMMPIREL-GGNI 427
           +E+ R LLLK+ L  Q   L  ++L +L   T+GYSGSDL AL ++AA+ PIREL    +
Sbjct: 510 NEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQV 569

Query: 428 LTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQELEEWNQSFG 461
             + A ++R+++  DF E++K I+ S++    +    WN+ FG
Sbjct: 570 KNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFG 610

[Close]

BLAST of ClCG05G002060 vs. TrEMBL
Match: A0A0A0L4C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124960 PE=3 SV=1)

HSP 1 Score: 828.6 bits (2139), Expect = 3.9e-237
Identity = 436/492 (88.62%), Postives = 448/492 (91.06%), Query Frame = 1


Query: 1   MSFLRGVIDYIGSIFSETSSIHDSPQNRSREGAST-MDSVNGVPVSNERYASKLKGYFNL 60
           MSFL+GV+DYIGSIFSETSSIHDSPQNRS EGAST MDSVNGVPVSNERYASK KGYFNL
Sbjct: 1   MSFLKGVVDYIGSIFSETSSIHDSPQNRSHEGASTIMDSVNGVPVSNERYASKFKGYFNL 60

Query: 61  SQEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASSTAVPSFISSSEQEKVKSYRQKISK 120
           SQEEIAKAVRAEEWGI+DDAILHYQNA+RIL EASSTAVPSFISSSEQEKVKSYRQKISK
Sbjct: 61  SQEEIAKAVRAEEWGIIDDAILHYQNANRILTEASSTAVPSFISSSEQEKVKSYRQKISK 120

Query: 121 WQSQVSDRLATLSIRAG------------------------SPVLRSSSHGGANNPITRS 180
           WQSQVSDRLATLSIRAG                         PVLRSSSH GANNPITRS
Sbjct: 121 WQSQVSDRLATLSIRAGVTSPNKSSSNHVQRAGNASKMPNKKPVLRSSSHSGANNPITRS 180

Query: 181 QPTNVGTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILP 240
           QP NVGTS+S +EVPDGYDPKLVEMINT IVDRSPSVKWDDI  GLQKAKQALLEMVILP
Sbjct: 181 QPANVGTSQSTREVPDGYDPKLVEMINTAIVDRSPSVKWDDI-AGLQKAKQALLEMVILP 240

Query: 241 TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEK 300
           TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASES+ATFFNLSAASFTSKWLGESEK
Sbjct: 241 TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESDATFFNLSAASFTSKWLGESEK 300

Query: 301 LVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLVI 360
           LVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGV SNSTDLVI
Sbjct: 301 LVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVTSNSTDLVI 360

Query: 361 VIGATNKPQELDDA-----VKRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQT 420
           VIGATNKPQELDDA     VKRIYIPLPDE+GRRLLLKHNLKGQS+SLPTRDLERLV QT
Sbjct: 361 VIGATNKPQELDDAVLRRLVKRIYIPLPDENGRRLLLKHNLKGQSYSLPTRDLERLVKQT 420

Query: 421 EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQ 463
           EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKY DFQEAMKVIRPSL+KS W+
Sbjct: 421 EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLSKSSWK 480

[Close]

BLAST of ClCG05G002060 vs. TrEMBL
Match: V4TXZ6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019901mg PE=3 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 1.0e-184
Identity = 345/491 (70.26%), Postives = 397/491 (80.86%), Query Frame = 1


Query: 1   MSFLRGVIDYIGSIFSETSSIHDSPQNRSREGASTMDSVNGVPVSNERYASKLKGYFNLS 60
           MSF++ +ID +GSIFS  SS  +S +N S   +STMD V G  ++NER A KLKGYF L+
Sbjct: 1   MSFIKDIIDSLGSIFSNDSSPFESERNPS---SSTMDGVAGTSITNERTAYKLKGYFELA 60

Query: 61  QEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASSTAVPSFISSSEQEKVKSYRQKISKW 120
           +EEIAKAVRAEEWG+VDDAI+HY+NA RIL EASST VPS+IS+SE EKVKSYRQKISKW
Sbjct: 61  KEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEASSTPVPSYISTSEHEKVKSYRQKISKW 120

Query: 121 QSQVSDRLATLSIRAG--------SP----------------VLRSSSHGGANNPITRSQ 180
           QSQVSDRL  L+ RAG        SP                +  +S     NNP+ R+Q
Sbjct: 121 QSQVSDRLQALNRRAGGTSTSKSTSPHAQTAAVSSTSNFRKNISPNSPRSSRNNPVVRNQ 180

Query: 181 PTNVGTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILPT 240
               G+SK + E  +GYD KLVEMINT IVDRSPSVKW+D+  GL+KAKQAL+EMVILP 
Sbjct: 181 TEKTGSSKPLAEAGNGYDSKLVEMINTAIVDRSPSVKWEDVA-GLEKAKQALMEMVILPA 240

Query: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKL 300
           KRRDLFTGLR+PARGLLLFGPPGNGKTMLAKAVASES+ATFFN+SA+S TSKW+GE EKL
Sbjct: 241 KRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEGEKL 300

Query: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLVIV 360
           VRTLFMVA SRQP VIF+DEIDS+MS+R A E++ASRRLKSEFL+QFDGV SN  DLVIV
Sbjct: 301 VRTLFMVAISRQPCVIFIDEIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIV 360

Query: 361 IGATNKPQELDDA-----VKRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQTE 420
           +GATNKPQELDDA     VKRIY+PLPDE+ RRLLLKH LKGQ+FSLP  DLERLV +TE
Sbjct: 361 MGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETE 420

Query: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQE 463
           GYSGSDLQALCEEAAMMPIRELG NILTVKA+Q+R L+Y DFQ+AM VIRPSLNKS+W+E
Sbjct: 421 GYSGSDLQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMAVIRPSLNKSKWEE 480

[Close]

BLAST of ClCG05G002060 vs. TrEMBL
Match: A0A067HDH4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011393mg PE=3 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 1.0e-184
Identity = 345/491 (70.26%), Postives = 397/491 (80.86%), Query Frame = 1


Query: 1   MSFLRGVIDYIGSIFSETSSIHDSPQNRSREGASTMDSVNGVPVSNERYASKLKGYFNLS 60
           MSF++ +ID +GSIFS  SS  +S +N S   +STMD V G  ++NER A KLKGYF L+
Sbjct: 1   MSFIKDIIDSLGSIFSNDSSPFESERNPS---SSTMDGVAGTSITNERTAYKLKGYFELA 60

Query: 61  QEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASSTAVPSFISSSEQEKVKSYRQKISKW 120
           +EEIAKAVRAEEWG+VDDAI+HY+NA RIL EASST VPS+IS+SE EKVKSYRQKISKW
Sbjct: 61  KEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEASSTPVPSYISTSEHEKVKSYRQKISKW 120

Query: 121 QSQVSDRLATLSIRAG--------SP----------------VLRSSSHGGANNPITRSQ 180
           QSQVSDRL  L+ RAG        SP                +  +S     NNP+ R+Q
Sbjct: 121 QSQVSDRLQALNRRAGGTSTSKSTSPHAQTAAVSSTSNFRKNISPNSPRSSRNNPVVRNQ 180

Query: 181 PTNVGTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILPT 240
               G+SK + E  +GYD KLVEMINT IVDRSPSVKW+D+  GL+KAKQAL+EMVILP 
Sbjct: 181 TEKTGSSKPLAEAGNGYDSKLVEMINTAIVDRSPSVKWEDVA-GLEKAKQALMEMVILPA 240

Query: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKL 300
           KRRDLFTGLR+PARGLLLFGPPGNGKTMLAKAVASES+ATFFN+SA+S TSKW+GE EKL
Sbjct: 241 KRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEGEKL 300

Query: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLVIV 360
           VRTLFMVA SRQP VIF+DEIDS+MS+R A E++ASRRLKSEFL+QFDGV SN  DLVIV
Sbjct: 301 VRTLFMVAISRQPCVIFIDEIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIV 360

Query: 361 IGATNKPQELDDA-----VKRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQTE 420
           +GATNKPQELDDA     VKRIY+PLPDE+ RRLLLKH LKGQ+FSLP  DLERLV +TE
Sbjct: 361 MGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETE 420

Query: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQE 463
           GYSGSDLQALCEEAAMMPIRELG NILTVKA+Q+R L+Y DFQ+AM VIRPSLNKS+W+E
Sbjct: 421 GYSGSDLQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMAVIRPSLNKSKWEE 480

[Close]

BLAST of ClCG05G002060 vs. TrEMBL
Match: D7U7L3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01720 PE=3 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 1.9e-183
Identity = 348/492 (70.73%), Postives = 392/492 (79.67%), Query Frame = 1


Query: 1   MSFLRGVIDYIGSIFSETSSIHDSPQNRSREGASTMDSVNGVPVSNERYASKLKGYFNLS 60
           MSFL+G+ID +GSIFS+++S  ++  + +      MD V G  VSN+R A KLKGY++L+
Sbjct: 1   MSFLKGIIDSLGSIFSDSTSPDEAQSSPNFSDNGAMDGVVGTGVSNQRIAYKLKGYYDLA 60

Query: 61  QEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASSTAVPSFISSSEQEKVKSYRQKISKW 120
            EEIAKAVRAEEWG+VDDAI+HY+NA RIL EASST+ PSFISSSEQEKVKSYRQKISKW
Sbjct: 61  TEEIAKAVRAEEWGLVDDAIVHYKNAQRILIEASSTSTPSFISSSEQEKVKSYRQKISKW 120

Query: 121 QSQVSDRLATLSIRAGS------------PVLRSSSHGGAN-------------NPITRS 180
           Q QV++RL  L  RAG             P   SS+   A              +PI RS
Sbjct: 121 QGQVAERLEILIRRAGGTSTNKNTLADTKPATTSSTKSNARTDVLQKSPLTNRRSPIMRS 180

Query: 181 QPTNVGTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILP 240
           Q   V +SK +QE   GYD KLVEMINT IVDRSPSVKWDD+  GL+KAKQALLEMVILP
Sbjct: 181 QSDKVVSSKPVQESGHGYDAKLVEMINTVIVDRSPSVKWDDVA-GLEKAKQALLEMVILP 240

Query: 241 TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEK 300
           TKR+DLFTGLR+PARGLLLFGPPGNGKTMLAKAVASES ATFFN+SA+S TSKW+GE EK
Sbjct: 241 TKRKDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESAATFFNVSASSLTSKWVGEGEK 300

Query: 301 LVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLVI 360
           LVRTLFMVA SRQPSVIFMDEIDS+MS+R   E+EASRRLKSEFLVQFDGV SN  DLVI
Sbjct: 301 LVRTLFMVAISRQPSVIFMDEIDSIMSTRMTNENEASRRLKSEFLVQFDGVTSNPDDLVI 360

Query: 361 VIGATNKPQELDDA-----VKRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQT 420
           VIGATNKPQELDDA     VKRIY+PLPDE+ RRLLLKH LKGQ+FSLP  DLERLV +T
Sbjct: 361 VIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVQET 420

Query: 421 EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQ 463
           EGYSGSDLQALCEEAAMMPIRELG NILTVKA+Q+R L+Y DFQ+AM VIRPSL K +WQ
Sbjct: 421 EGYSGSDLQALCEEAAMMPIRELGTNILTVKANQVRPLRYGDFQKAMTVIRPSLQKGKWQ 480

[Close]

BLAST of ClCG05G002060 vs. TrEMBL
Match: A0A0D2Q046_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G173400 PE=3 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 8.8e-181
Identity = 338/488 (69.26%), Postives = 390/488 (79.92%), Query Frame = 1


Query: 1   MSFLRGVIDYIGSIFSETSSIHDSPQNRSREGASTMDSVNGVPVSNERYASKLKGYFNLS 60
           MSF++ +ID + SI S  S+ ++S Q  S      M+ + G    NER A KLKGYF+L+
Sbjct: 1   MSFIKDIIDSLSSIISTDSTPYESTQKPSSSTCQNMEGIAG----NERTAYKLKGYFDLA 60

Query: 61  QEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASSTAVPSFISSSEQEKVKSYRQKISKW 120
           + EI KAVRAEEWG+VDDA++HY+NA RIL EASST  PS+ISSSEQEKVKSYRQKISKW
Sbjct: 61  KGEIDKAVRAEEWGLVDDALIHYKNAQRILIEASSTPTPSYISSSEQEKVKSYRQKISKW 120

Query: 121 QSQVSDRLATLSIRAGSPVLRSSSHGGAN---------------------NPITRSQPTN 180
           Q QVS+RL  LS R+GS     ++   A                      NP+ R+Q   
Sbjct: 121 QGQVSERLQVLSRRSGSTSANKNTLTHAQTAAVSPRASNSRRDVFQKSPRNPVVRNQVDK 180

Query: 181 VGTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILPTKRR 240
           VG+SKS QE  +GY+ KLVEMINT IVDRSP+VKWDD+  GL+KAKQAL+EMVILPT+RR
Sbjct: 181 VGSSKSAQESANGYESKLVEMINTAIVDRSPAVKWDDVA-GLEKAKQALMEMVILPTRRR 240

Query: 241 DLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKLVRT 300
           DLFTGLR+PARGLLLFGPPGNGKTMLAKAVASES+ATFFN+SA+S TSKW+GE EKLVRT
Sbjct: 241 DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEGEKLVRT 300

Query: 301 LFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLVIVIGA 360
           LFMVA S+QPSVIFMDEIDSVMS+R A E++ASRRLKSEFL+QFDGV SN  DLVIVIGA
Sbjct: 301 LFMVAISKQPSVIFMDEIDSVMSTRLANENDASRRLKSEFLIQFDGVTSNPNDLVIVIGA 360

Query: 361 TNKPQELDDA-----VKRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQTEGYS 420
           TNKPQELDDA     VKRIY+PLPDE+ RRLLLKH LKGQ FSLP RDLE+LV +TEGYS
Sbjct: 361 TNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQEFSLPGRDLEQLVRETEGYS 420

Query: 421 GSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQELEE 463
           GSDLQALCEEAAMMPIRELG NILTVKA+Q+R L+Y DFQ+AM VIRPSLNKS+W+ELE+
Sbjct: 421 GSDLQALCEEAAMMPIRELGSNILTVKANQVRPLRYEDFQKAMSVIRPSLNKSKWEELEQ 480

[Close]

BLAST of ClCG05G002060 vs. TAIR10
Match: AT2G45500.1 (AT2G45500.1 AAA-type ATPase family protein)

HSP 1 Score: 571.6 bits (1472), Expect = 4.3e-163
Identity = 311/493 (63.08%), Postives = 368/493 (74.65%), Query Frame = 1


Query: 1   MSFLRGVIDYIGSIFSETSSIHDSPQNRSREGASTMDSVNGVPVSNERYASKLKGYFNLS 60
           MSFLRG+ID   SI +E S   D   + S   + +M+ ++GVPV+NER A KLKGYF+L+
Sbjct: 1   MSFLRGIIDSFSSILNEESK-KDPSVSSSSTSSESMNGIDGVPVTNERIAYKLKGYFDLA 60

Query: 61  QEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASSTAVPSFISSSEQEKVKSYRQKISKW 120
           +EEIAK VRAEEWG+ DDA+LHY+NA RI+ EA+ST  PS+ISSSE+EKV+SYR+KIS W
Sbjct: 61  KEEIAKGVRAEEWGLHDDALLHYRNAQRIMNEATSTPSPSYISSSEKEKVRSYREKISNW 120

Query: 121 QSQVSDRLATLSIRAG-----------SPVLRSSSHGGANNPITRSQPTNV---GTSKSI 180
           Q+QVS+RL  L  R G            P   S S   +    T SQ T V   G +   
Sbjct: 121 QNQVSERLQALGKRTGVGMSENKRTVAYPSSASVSSTASRYRKTLSQKTPVARGGVATPR 180

Query: 181 QEVPDGYDPKLVEM------------INTTIVDRSPSVKWDDIGTGLQKAKQALLEMVIL 240
                   PK V+             INTTIVDRSPSVKWDD+  GL  AKQALLEMVIL
Sbjct: 181 NPKDAAASPKPVKESGNVYDDKLVEMINTTIVDRSPSVKWDDV-AGLNGAKQALLEMVIL 240

Query: 241 PTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESE 300
           P KRRDLFTGLR+PARGLLLFGPPGNGKTMLAKAVASES+ATFFN+SA+S TSKW+GE+E
Sbjct: 241 PAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAE 300

Query: 301 KLVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLV 360
           KLV+TLF VA SRQPSVIFMDEIDS+MS+R   E+EASRRLKSEFL+QFDGV SN  DLV
Sbjct: 301 KLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEASRRLKSEFLIQFDGVTSNPDDLV 360

Query: 361 IVIGATNKPQELDDA-----VKRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQ 420
           I+IGATNKPQELDDA     VKRIY+PLPD + R+LL K  LK Q  SL   D++++V +
Sbjct: 361 IIIGATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDKIVKE 420

Query: 421 TEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRW 463
           TEGYSGSDLQALCEEAAMMPIRELG NILT++A+++RSL+Y DF+++M VIRPSL+KS+W
Sbjct: 421 TEGYSGSDLQALCEEAAMMPIRELGANILTIQANKVRSLRYDDFRKSMAVIRPSLSKSKW 480

[Close]

BLAST of ClCG05G002060 vs. TAIR10
Match: AT3G27120.1 (AT3G27120.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 283.5 bits (724), Expect = 2.3e-76
Identity = 149/311 (47.91%), Postives = 213/311 (68.49%), Query Frame = 1


Query: 161 GTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILPTKRRD 220
           G    + E     +P+L+E ++  I+DR P+V+WDDI  GL+ AK+ + EMVI P  R D
Sbjct: 165 GPDGELPEKLRNLEPRLIEHVSNEIMDRDPNVRWDDIA-GLEHAKKCVTEMVIWPLLRPD 224

Query: 221 LFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKLVRTL 280
           +F G R P +GLLLFGPPG GKTM+ KA+A E++ATFF +SA+S TSKW+GE EKLVR L
Sbjct: 225 IFKGCRSPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRAL 284

Query: 281 FMVAKSRQPSVIFMDEIDSVMSSRHA-GEHEASRRLKSEFLVQFDGVMSNSTDLVIVIGA 340
           F VA  RQP+VIF+DEIDS++S R + GEHE+SRRLK++FL++ +G  S S + +++IGA
Sbjct: 285 FGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGS-EQILLIGA 344

Query: 341 TNKPQELDDA-----VKRIYIPLPDEDGRRLLLKHNLKGQS-FSLPTRDLERLVIQTEGY 400
           TN+PQELD+A      KR+YIPLP  + R  ++++ LK    F+L   D+  +   TEGY
Sbjct: 345 TNRPQELDEAARRRLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNIICNLTEGY 404

Query: 401 SGSDLQALCEEAAMMPIREL---GGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQ 460
           SGSD++ L ++A M P+RE    G +I  +  D +R +  +DF++A++ +RPS++++   
Sbjct: 405 SGSDMKNLVKDATMGPLREALKRGIDITNLTKDDMRLVTLQDFKDALQEVRPSVSQNELG 464

Query: 461 ELEEWNQSFGS 462
             E WN  FGS
Sbjct: 465 IYENWNNQFGS 473

[Close]

BLAST of ClCG05G002060 vs. TAIR10
Match: AT1G80350.1 (AT1G80350.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 245.4 bits (625), Expect = 7.1e-65
Identity = 149/356 (41.85%), Postives = 225/356 (63.20%), Query Frame = 1


Query: 129 ATLSIRAGSPVLRSSSHG--GANNPITRSQPTN--VGTSKSIQEVPDGYDPKLVEMINTT 188
           AT    AG+   RSS+ G  GA +   +++  N      KS + + +G D  L  M+   
Sbjct: 172 ATSKSTAGA---RSSTAGKKGAASKSNKAESMNGDAEDGKSKRGLYEGPDEDLAAMLERD 231

Query: 189 IVDRSPSVKWDDIGTGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTM 248
           ++D +P V+WDD+  GL +AK+ L E V+LP    + F G+R+P +G+L+FGPPG GKT+
Sbjct: 232 VLDSTPGVRWDDVA-GLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTL 291

Query: 249 LAKAVASESEATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSSR 308
           LAKAVA+E   TFFN+S+A+  SKW GESE++VR LF +A++  PS IF+DEIDS+ +SR
Sbjct: 292 LAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR 351

Query: 309 -HAGEHEASRRLKSEFLVQFDGVMSNSTD------LVIVIGATNKPQELDDAV-----KR 368
             +GEHE+SRR+KSE LVQ DGV + +T+      +V+V+ ATN P ++D+A+     KR
Sbjct: 352 GGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKR 411

Query: 369 IYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQTEGYSGSDLQALCEEAAMMPI-R 428
           IYIPLPD + R+ L+  NL+    +    ++E +  +TEGYSG DL  +C +A+M  + R
Sbjct: 412 IYIPLPDFESRKALININLRTVEVASDV-NIEDVARRTEGYSGDDLTNVCRDASMNGMRR 471

Query: 429 ELGG----NILTVKADQIRS--LKYRDFQEAMKVIRPSLNKSRWQELEEWNQSFGS 462
           ++ G     I  +  D I +  +   DF+EA++ ++PS++ S  ++ E+W   FGS
Sbjct: 472 KIAGKTRDEIKNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHEKWLSEFGS 522

[Close]

BLAST of ClCG05G002060 vs. TAIR10
Match: AT2G34560.2 (AT2G34560.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 222.2 bits (565), Expect = 6.4e-58
Identity = 133/301 (44.19%), Postives = 183/301 (60.80%), Query Frame = 1


Query: 177 LVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFG 236
           L E ++  I+  +P++KW+ I  GL+ AK+ L E V++P K    F GL  P +G+LLFG
Sbjct: 94  LAESLSRDIIRGNPNIKWESI-KGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGILLFG 153

Query: 237 PPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDE 296
           PPG GKTMLAKAVA+E   TFFN+SA+S  SKW G+SEKL+R LF +A+   PS IF+DE
Sbjct: 154 PPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDE 213

Query: 297 IDSVMSSRHA---GEHEASRRLKSEFLVQFDGVMSNSTDLVIVIGATNKPQELDDAV--- 356
           ID+++S R      EHEASRRLK+E L+Q DG +  + +LV V+ ATN P ELD A+   
Sbjct: 214 IDAIISQRGGEGRSEHEASRRLKTELLIQMDG-LQKTNELVFVLAATNLPWELDAAMLRR 273

Query: 357 --KRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQTEGYSGSDLQALCEEAAMM 416
             KRI +PLPD + RR + +  +  Q    P    + LV ++EGYSGSD++ LC+EAAM 
Sbjct: 274 LEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPH-DVLVEKSEGYSGSDIRILCKEAAMQ 333

Query: 417 PIRELGGNILTVKAD--------QIRSLKYRDFQEAMKVIRPSLNKSRWQELEEWNQSFG 462
           P+R     IL  + D        +I  +   D   A+   RPS +       +++N  +G
Sbjct: 334 PLRRTLA-ILEDREDVVPEDELPKIGPILPEDIDRALSNTRPSAHLHA-HLYDKFNDDYG 389

[Close]

BLAST of ClCG05G002060 vs. TAIR10
Match: AT3G19740.1 (AT3G19740.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 219.5 bits (558), Expect = 4.2e-57
Identity = 119/294 (40.48%), Postives = 187/294 (63.61%), Query Frame = 1


Query: 181 INTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILPTKRRDLFT--GLRKPARGLLLFGPP 240
           ++  +      VK+DDIG  L+  K+ L E+VILP +R +LFT   L +P +G+LLFGPP
Sbjct: 690 VSAVVAPGEIGVKFDDIGA-LEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPP 749

Query: 241 GNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEID 300
           G GKT+LAKA+A+E+ A F +++ ++ TSKW G++EKL + LF  A    P +IF+DE+D
Sbjct: 750 GTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVD 809

Query: 301 SVMSSR-HAGEHEASRRLKSEFLVQFDGVMSNSTDLVIVIGATNKPQELDDAV-----KR 360
           S++ +R  A EHEA+RR+++EF+  +DG+ S  +  ++++GATN+P +LDDAV     +R
Sbjct: 810 SLLGARGGAFEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIRRLPRR 869

Query: 361 IYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQTEGYSGSDLQALCEEAAMMPIRE 420
           IY+ LPD + R  +LK  L  ++      + ++L  +TEGYSGSDL+ LC  AA  P++E
Sbjct: 870 IYVDLPDAENRLKILKIFLTPENLETGF-EFDKLAKETEGYSGSDLKNLCIAAAYRPVQE 929

Query: 421 L----GGNILTVKADQIRSLKYRDFQEAMKVIRPSL--NKSRWQELEEWNQSFG 461
           L      + +T  +  +R L   DF ++   + PS+  + +   EL +WN+ +G
Sbjct: 930 LLQEENKDSVTNASPDLRPLSLDDFIQSKAKVSPSVAYDATTMNELRKWNEQYG 981

[Close]

BLAST of ClCG05G002060 vs. NCBI nr
Match: gi|659075429|ref|XP_008438138.1| (PREDICTED: spastin isoform X1 [Cucumis melo])

HSP 1 Score: 832.0 bits (2148), Expect = 5.0e-238
Identity = 437/491 (89.00%), Postives = 447/491 (91.04%), Query Frame = 1


Query: 1   MSFLRGVIDYIGSIFSETSSIHDSPQNRSREGASTMDSVNGVPVSNERYASKLKGYFNLS 60
           MSFL+GV+DYIGSIFSETSSIHDSPQNRS EGASTMDSVNGVPVSNERYASK KGYFNLS
Sbjct: 1   MSFLKGVVDYIGSIFSETSSIHDSPQNRSHEGASTMDSVNGVPVSNERYASKFKGYFNLS 60

Query: 61  QEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASSTAVPSFISSSEQEKVKSYRQKISKW 120
           QEEIAKAVRAEEWGI+DDAILHYQNA+RIL EASSTAVPSFISSSEQEKVKSYRQKISKW
Sbjct: 61  QEEIAKAVRAEEWGIIDDAILHYQNANRILTEASSTAVPSFISSSEQEKVKSYRQKISKW 120

Query: 121 QSQVSDRLATLSIRAG------------------------SPVLRSSSHGGANNPITRSQ 180
           QSQVSDRLATLSIRAG                         PVLRSSSH GANN ITRSQ
Sbjct: 121 QSQVSDRLATLSIRAGVTSSNKSSLNHVQRAGNASKMPNKKPVLRSSSHSGANNSITRSQ 180

Query: 181 PTNVGTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILPT 240
           P NVGTS+S +EVPDGYDPKLVEMINT IVDRSPSVKWDDI  GLQKAKQALLEMVILPT
Sbjct: 181 PANVGTSQSTREVPDGYDPKLVEMINTAIVDRSPSVKWDDIA-GLQKAKQALLEMVILPT 240

Query: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKL 300
           KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKL
Sbjct: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKL 300

Query: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLVIV 360
           VRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGV SNSTDLVIV
Sbjct: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVTSNSTDLVIV 360

Query: 361 IGATNKPQELDDA-----VKRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQTE 420
           IGATNKPQELDDA     VKRIYIPLPDE+GRRLLLKHNLKGQS+SLPTRDLERLV QTE
Sbjct: 361 IGATNKPQELDDAVLRRLVKRIYIPLPDENGRRLLLKHNLKGQSYSLPTRDLERLVKQTE 420

Query: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQE 463
           GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKY DFQEAMKVIRPSL+KS W+E
Sbjct: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLSKSSWKE 480

[Close]

BLAST of ClCG05G002060 vs. NCBI nr
Match: gi|778677383|ref|XP_011650781.1| (PREDICTED: spastin [Cucumis sativus])

HSP 1 Score: 828.6 bits (2139), Expect = 5.6e-237
Identity = 436/492 (88.62%), Postives = 448/492 (91.06%), Query Frame = 1


Query: 1   MSFLRGVIDYIGSIFSETSSIHDSPQNRSREGAST-MDSVNGVPVSNERYASKLKGYFNL 60
           MSFL+GV+DYIGSIFSETSSIHDSPQNRS EGAST MDSVNGVPVSNERYASK KGYFNL
Sbjct: 1   MSFLKGVVDYIGSIFSETSSIHDSPQNRSHEGASTIMDSVNGVPVSNERYASKFKGYFNL 60

Query: 61  SQEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASSTAVPSFISSSEQEKVKSYRQKISK 120
           SQEEIAKAVRAEEWGI+DDAILHYQNA+RIL EASSTAVPSFISSSEQEKVKSYRQKISK
Sbjct: 61  SQEEIAKAVRAEEWGIIDDAILHYQNANRILTEASSTAVPSFISSSEQEKVKSYRQKISK 120

Query: 121 WQSQVSDRLATLSIRAG------------------------SPVLRSSSHGGANNPITRS 180
           WQSQVSDRLATLSIRAG                         PVLRSSSH GANNPITRS
Sbjct: 121 WQSQVSDRLATLSIRAGVTSPNKSSSNHVQRAGNASKMPNKKPVLRSSSHSGANNPITRS 180

Query: 181 QPTNVGTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILP 240
           QP NVGTS+S +EVPDGYDPKLVEMINT IVDRSPSVKWDDI  GLQKAKQALLEMVILP
Sbjct: 181 QPANVGTSQSTREVPDGYDPKLVEMINTAIVDRSPSVKWDDI-AGLQKAKQALLEMVILP 240

Query: 241 TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEK 300
           TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASES+ATFFNLSAASFTSKWLGESEK
Sbjct: 241 TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESDATFFNLSAASFTSKWLGESEK 300

Query: 301 LVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLVI 360
           LVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGV SNSTDLVI
Sbjct: 301 LVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVTSNSTDLVI 360

Query: 361 VIGATNKPQELDDA-----VKRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQT 420
           VIGATNKPQELDDA     VKRIYIPLPDE+GRRLLLKHNLKGQS+SLPTRDLERLV QT
Sbjct: 361 VIGATNKPQELDDAVLRRLVKRIYIPLPDENGRRLLLKHNLKGQSYSLPTRDLERLVKQT 420

Query: 421 EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQ 463
           EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKY DFQEAMKVIRPSL+KS W+
Sbjct: 421 EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLSKSSWK 480

[Close]

BLAST of ClCG05G002060 vs. NCBI nr
Match: gi|659075431|ref|XP_008438140.1| (PREDICTED: spastin isoform X2 [Cucumis melo])

HSP 1 Score: 768.1 bits (1982), Expect = 8.9e-219
Identity = 405/456 (88.82%), Postives = 413/456 (90.57%), Query Frame = 1


Query: 36  MDSVNGVPVSNERYASKLKGYFNLSQEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASS 95
           MDSVNGVPVSNERYASK KGYFNLSQEEIAKAVRAEEWGI+DDAILHYQNA+RIL EASS
Sbjct: 1   MDSVNGVPVSNERYASKFKGYFNLSQEEIAKAVRAEEWGIIDDAILHYQNANRILTEASS 60

Query: 96  TAVPSFISSSEQEKVKSYRQKISKWQSQVSDRLATLSIRAG------------------- 155
           TAVPSFISSSEQEKVKSYRQKISKWQSQVSDRLATLSIRAG                   
Sbjct: 61  TAVPSFISSSEQEKVKSYRQKISKWQSQVSDRLATLSIRAGVTSSNKSSLNHVQRAGNAS 120

Query: 156 -----SPVLRSSSHGGANNPITRSQPTNVGTSKSIQEVPDGYDPKLVEMINTTIVDRSPS 215
                 PVLRSSSH GANN ITRSQP NVGTS+S +EVPDGYDPKLVEMINT IVDRSPS
Sbjct: 121 KMPNKKPVLRSSSHSGANNSITRSQPANVGTSQSTREVPDGYDPKLVEMINTAIVDRSPS 180

Query: 216 VKWDDIGTGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVAS 275
           VKWDDI  GLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVAS
Sbjct: 181 VKWDDIA-GLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVAS 240

Query: 276 ESEATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEA 335
           ESEATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEA
Sbjct: 241 ESEATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEA 300

Query: 336 SRRLKSEFLVQFDGVMSNSTDLVIVIGATNKPQELDDA-----VKRIYIPLPDEDGRRLL 395
           SRRLKSEFLVQFDGV SNSTDLVIVIGATNKPQELDDA     VKRIYIPLPDE+GRRLL
Sbjct: 301 SRRLKSEFLVQFDGVTSNSTDLVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENGRRLL 360

Query: 396 LKHNLKGQSFSLPTRDLERLVIQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIR 455
           LKHNLKGQS+SLPTRDLERLV QTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIR
Sbjct: 361 LKHNLKGQSYSLPTRDLERLVKQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIR 420

Query: 456 SLKYRDFQEAMKVIRPSLNKSRWQELEEWNQSFGSN 463
           SLKY DFQEAMKVIRPSL+KS W+ELEEWNQSFGSN
Sbjct: 421 SLKYEDFQEAMKVIRPSLSKSSWKELEEWNQSFGSN 455

[Close]

BLAST of ClCG05G002060 vs. NCBI nr
Match: gi|567905468|ref|XP_006445222.1| (hypothetical protein CICLE_v10019901mg [Citrus clementina])

HSP 1 Score: 654.4 bits (1687), Expect = 1.4e-184
Identity = 345/491 (70.26%), Postives = 397/491 (80.86%), Query Frame = 1


Query: 1   MSFLRGVIDYIGSIFSETSSIHDSPQNRSREGASTMDSVNGVPVSNERYASKLKGYFNLS 60
           MSF++ +ID +GSIFS  SS  +S +N S   +STMD V G  ++NER A KLKGYF L+
Sbjct: 1   MSFIKDIIDSLGSIFSNDSSPFESERNPS---SSTMDGVAGTSITNERTAYKLKGYFELA 60

Query: 61  QEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASSTAVPSFISSSEQEKVKSYRQKISKW 120
           +EEIAKAVRAEEWG+VDDAI+HY+NA RIL EASST VPS+IS+SE EKVKSYRQKISKW
Sbjct: 61  KEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEASSTPVPSYISTSEHEKVKSYRQKISKW 120

Query: 121 QSQVSDRLATLSIRAG--------SP----------------VLRSSSHGGANNPITRSQ 180
           QSQVSDRL  L+ RAG        SP                +  +S     NNP+ R+Q
Sbjct: 121 QSQVSDRLQALNRRAGGTSTSKSTSPHAQTAAVSSTSNFRKNISPNSPRSSRNNPVVRNQ 180

Query: 181 PTNVGTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILPT 240
               G+SK + E  +GYD KLVEMINT IVDRSPSVKW+D+  GL+KAKQAL+EMVILP 
Sbjct: 181 TEKTGSSKPLAEAGNGYDSKLVEMINTAIVDRSPSVKWEDVA-GLEKAKQALMEMVILPA 240

Query: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKL 300
           KRRDLFTGLR+PARGLLLFGPPGNGKTMLAKAVASES+ATFFN+SA+S TSKW+GE EKL
Sbjct: 241 KRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEGEKL 300

Query: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLVIV 360
           VRTLFMVA SRQP VIF+DEIDS+MS+R A E++ASRRLKSEFL+QFDGV SN  DLVIV
Sbjct: 301 VRTLFMVAISRQPCVIFIDEIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIV 360

Query: 361 IGATNKPQELDDA-----VKRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQTE 420
           +GATNKPQELDDA     VKRIY+PLPDE+ RRLLLKH LKGQ+FSLP  DLERLV +TE
Sbjct: 361 MGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETE 420

Query: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQE 463
           GYSGSDLQALCEEAAMMPIRELG NILTVKA+Q+R L+Y DFQ+AM VIRPSLNKS+W+E
Sbjct: 421 GYSGSDLQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMAVIRPSLNKSKWEE 480

[Close]

BLAST of ClCG05G002060 vs. NCBI nr
Match: gi|359489371|ref|XP_003633914.1| (PREDICTED: spastin [Vitis vinifera])

HSP 1 Score: 650.2 bits (1676), Expect = 2.7e-183
Identity = 348/492 (70.73%), Postives = 392/492 (79.67%), Query Frame = 1


Query: 1   MSFLRGVIDYIGSIFSETSSIHDSPQNRSREGASTMDSVNGVPVSNERYASKLKGYFNLS 60
           MSFL+G+ID +GSIFS+++S  ++  + +      MD V G  VSN+R A KLKGY++L+
Sbjct: 1   MSFLKGIIDSLGSIFSDSTSPDEAQSSPNFSDNGAMDGVVGTGVSNQRIAYKLKGYYDLA 60

Query: 61  QEEIAKAVRAEEWGIVDDAILHYQNAHRILAEASSTAVPSFISSSEQEKVKSYRQKISKW 120
            EEIAKAVRAEEWG+VDDAI+HY+NA RIL EASST+ PSFISSSEQEKVKSYRQKISKW
Sbjct: 61  TEEIAKAVRAEEWGLVDDAIVHYKNAQRILIEASSTSTPSFISSSEQEKVKSYRQKISKW 120

Query: 121 QSQVSDRLATLSIRAGS------------PVLRSSSHGGAN-------------NPITRS 180
           Q QV++RL  L  RAG             P   SS+   A              +PI RS
Sbjct: 121 QGQVAERLEILIRRAGGTSTNKNTLADTKPATTSSTKSNARTDVLQKSPLTNRRSPIMRS 180

Query: 181 QPTNVGTSKSIQEVPDGYDPKLVEMINTTIVDRSPSVKWDDIGTGLQKAKQALLEMVILP 240
           Q   V +SK +QE   GYD KLVEMINT IVDRSPSVKWDD+  GL+KAKQALLEMVILP
Sbjct: 181 QSDKVVSSKPVQESGHGYDAKLVEMINTVIVDRSPSVKWDDVA-GLEKAKQALLEMVILP 240

Query: 241 TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEK 300
           TKR+DLFTGLR+PARGLLLFGPPGNGKTMLAKAVASES ATFFN+SA+S TSKW+GE EK
Sbjct: 241 TKRKDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESAATFFNVSASSLTSKWVGEGEK 300

Query: 301 LVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVMSNSTDLVI 360
           LVRTLFMVA SRQPSVIFMDEIDS+MS+R   E+EASRRLKSEFLVQFDGV SN  DLVI
Sbjct: 301 LVRTLFMVAISRQPSVIFMDEIDSIMSTRMTNENEASRRLKSEFLVQFDGVTSNPDDLVI 360

Query: 361 VIGATNKPQELDDA-----VKRIYIPLPDEDGRRLLLKHNLKGQSFSLPTRDLERLVIQT 420
           VIGATNKPQELDDA     VKRIY+PLPDE+ RRLLLKH LKGQ+FSLP  DLERLV +T
Sbjct: 361 VIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVQET 420

Query: 421 EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYRDFQEAMKVIRPSLNKSRWQ 463
           EGYSGSDLQALCEEAAMMPIRELG NILTVKA+Q+R L+Y DFQ+AM VIRPSL K +WQ
Sbjct: 421 EGYSGSDLQALCEEAAMMPIRELGTNILTVKANQVRPLRYGDFQKAMTVIRPSLQKGKWQ 480

The following BLAST results are available for this feature:

BLAST of ClCG05G002060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SPAST_CHICK	4.0e-86	51.62	Spastin OS=Gallus gallus GN=SPAST PE=2 SV=2	[more]
SPAST_XENTR	4.4e-85	48.92	Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1	[more]
SPAST_XENLA	1.7e-84	52.21	Spastin OS=Xenopus laevis GN=spast PE=2 SV=1	[more]
SPAST_RAT	3.2e-83	51.67	Spastin OS=Rattus norvegicus GN=Spast PE=1 SV=1	[more]
SPAST_MOUSE	5.4e-83	50.44	Spastin OS=Mus musculus GN=Spast PE=1 SV=3	[more]

BLAST of ClCG05G002060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4C5_CUCSA	3.9e-237	88.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124960 PE=3 SV=1	[more]
V4TXZ6_9ROSI	1.0e-184	70.26	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019901mg PE=3 SV=1	[more]
A0A067HDH4_CITSI	1.0e-184	70.26	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011393mg PE=3 SV=1	[more]
D7U7L3_VITVI	1.9e-183	70.73	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01720 PE=3 SV=...	[more]
A0A0D2Q046_GOSRA	8.8e-181	69.26	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G173400 PE=3 SV=1	[more]

BLAST of ClCG05G002060 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45500.1	4.3e-163	63.08	AAA-type ATPase family protein	[more]
AT3G27120.1	2.3e-76	47.91	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT1G80350.1	7.1e-65	41.85	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT2G34560.2	6.4e-58	44.19	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT3G19740.1	4.2e-57	40.48	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]

BLAST of ClCG05G002060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075429\|ref\|XP_008438138.1\|	5.0e-238	89.00	PREDICTED: spastin isoform X1 [Cucumis melo]	[more]
gi\|778677383\|ref\|XP_011650781.1\|	5.6e-237	88.62	PREDICTED: spastin [Cucumis sativus]	[more]
gi\|659075431\|ref\|XP_008438140.1\|	8.9e-219	88.82	PREDICTED: spastin isoform X2 [Cucumis melo]	[more]
gi\|567905468\|ref\|XP_006445222.1\|	1.4e-184	70.26	hypothetical protein CICLE_v10019901mg [Citrus clementina]	[more]
gi\|359489371\|ref\|XP_003633914.1\|	2.7e-183	70.73	PREDICTED: spastin [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003593	AAA+_ATPase
IPR003959	ATPase_AAA_core
IPR003960	ATPase_AAA_CS
IPR007330	MIT
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0043988	histone H3-S28 phosphorylation
biological_process	GO:0008150	biological_process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0032465	regulation of cytokinesis
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0043987	histone H3-S10 phosphorylation
biological_process	GO:0051567	histone H3-K9 methylation
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0007059	chromosome segregation
biological_process	GO:0006342	chromatin silencing
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005819	spindle
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000775	chromosome, centromeric region
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0017111	nucleoside-triphosphatase activity
molecular_function	GO:0035175	histone kinase activity (H3-S10 specific)
molecular_function	GO:0044022	histone kinase activity (H3-S28 specific)
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G002060.1	ClCG05G002060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 228..359 score: 1.3
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 232..352 score: 2.6
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 334..352 scor
IPR007330	MIT	SMART	SM00745	smart	coord: 53..130 score: 4.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 186..364 score: 3.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 190..458 score: 2.95
None	No IPR available	GENE3D	G3DSA:1.10.8.60		coord: 365..443 score: 3.3
None	No IPR available	PANTHER	PTHR23074	AAA ATPASE	coord: 56..462 score: 2.8E
None	No IPR available	PANTHER	PTHR23074:SF86	SPASTIN	coord: 56..462 score: 2.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G002060	Csa3G124960	Cucumber (Chinese Long) v2	cuwcgB222
ClCG05G002060	MELO3C006171	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G002060	Cla021290	Watermelon (97103) v1	wcgwmB286
ClCG05G002060	Cla97C05G082560	Watermelon (97103) v2	wcgwmbB229
ClCG05G002060	Bhi01G000205	Wax gourd	wcgwgoB442
ClCG05G002060	CSPI03G09360	Wild cucumber (PI 183967)	cpiwcgB226
ClCG05G002060	Cucsa.257830	Cucumber (Gy14) v1	cgywcgB451
ClCG05G002060	CmaCh06G011220	Cucurbita maxima (Rimu)	cmawcgB737
ClCG05G002060	CmoCh06G011490	Cucurbita moschata (Rifu)	cmowcgB743
ClCG05G002060	Lsi05G019820	Bottle gourd (USVL1VR-Ls)	lsiwcgB335
ClCG05G002060	Cp4.1LG08g01800	Cucurbita pepo (Zucchini)	cpewcgB787
ClCG05G002060	CsGy3G009460	Cucumber (Gy14) v2	cgybwcgB203
ClCG05G002060	MELO3C006171.2	Melon (DHL92) v3.6.1	medwcgB416
ClCG05G002060	Carg23893	Silver-seed gourd	carwcgB0472
ClCG05G002060	CsaV3_3G009500	Cucumber (Chinese Long) v3	cucwcgB225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G002060	Cucurbita maxima (Rimu)	cmawcgB233
ClCG05G002060	Cucurbita maxima (Rimu)	cmawcgB798
ClCG05G002060	Cucurbita moschata (Rifu)	cmowcgB219
ClCG05G002060	Cucurbita moschata (Rifu)	cmowcgB793
ClCG05G002060	Wild cucumber (PI 183967)	cpiwcgB494
ClCG05G002060	Cucumber (Chinese Long) v2	cuwcgB470
ClCG05G002060	Melon (DHL92) v3.5.1	mewcgB122
ClCG05G002060	Watermelon (97103) v1	wcgwmB309
ClCG05G002060	Cucurbita pepo (Zucchini)	cpewcgB138
ClCG05G002060	Cucurbita pepo (Zucchini)	cpewcgB559
ClCG05G002060	Bottle gourd (USVL1VR-Ls)	lsiwcgB022
ClCG05G002060	Cucumber (Gy14) v2	cgybwcgB431
ClCG05G002060	Melon (DHL92) v3.6.1	medwcgB117
ClCG05G002060	Silver-seed gourd	carwcgB0602
ClCG05G002060	Cucumber (Chinese Long) v3	cucwcgB490
ClCG05G002060	Watermelon (97103) v2	wcgwmbB234
ClCG05G002060	Watermelon (Charleston Gray)	wcgwcgB156
ClCG05G002060	Cucumber (Gy14) v1	cgywcgB617