Carg23893 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23893
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	spastin-like
Location	Cucurbita_argyrosperma_scaffold_252 : 95434 .. 103050 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTTTTCAGAGGTGTAGCTGACTATATTGGATCGATCTTCTCAGAAGCGAGCTCAATTCACGATTTGTCGCAGAATCGTGGCCGCGAGGGTGCTTCAACCATGGAGGGCGTTAATGGGATTCCTGTTTCGAACGAGCGCTATGCTTCCAAGCTCAAAGGGTACTTCGATTTGTCCAAGGAGGAGATCGCCAAGGCCGTCAGAGCGGAGGAGTGGGGCTTGATCGACGATGCCATCCTGCACTACCAGAATGCGCTGCGTATTCTGGCTGAGGCCAGTTCAACCACCGTGCCCTCGTTTATCAGTTCTAGGTATTGAGAATTCTGCTAATTTGCTGAATAATTACTTCCCAGTGCACCATTTTATAAATCTTGGCGCTAGACTGTAACCCTATTCATGTGTTAATTTTGAATTCTATGAGGGTAAGCAATGAGTCCATTTCTGAACTTTGAGAAACAAATAATTTGTGACATATGGTCCAAAGTTATAAAACAATTGGAGTTTTAGTCTCGAGTTATCACGTTTTTTAGTGCAAATTTCGAGAAAATAAACATGGGAATCTTTGTCATGTTTACCACCAAGATTTAATAAACAATTGGAGTTTTTTTTTTAGTTTTGTAATCCATCTCTGCCTTATACAATGTTCTTACATCCCTTAAAAAAGATATACCTATAAATTGATGGAGTACCAGTCGAAGTTCATAGATTTAGTGCTTTTTCTGCTCTATGCATGATCAGCGAACAAGAGAAGGTGAAATCTCATAGACAAAAGATATCAAAGTGGCAAAGTCAAGTTTCTGAGAGATTACAAGCTCTAAATATGCGAGCAGGTTCAGTTCTGGTCTTGTAATAACTTAATCTATTTCATTCATGATGTTCTTGGTTGTCGGACATTTAATAACTTATAATCTTTCTCTTATTTTTCTATCTTCTAATTCAGGTGTTACATCCTCAAACAAGGTACGTTTCATCTGTATGAAGTGTAAGTGTTCAATGTAATATCATATTATCTTACTTTAATTAAAAACACTGCTATTCCTCCGCCTTCTCGTGGTGAGTAAGTGCTTGAATGTATTATAAATCCTAAACTTGGATGACTTGAGCTTCATAGAGGAAAGAAAGAAGTGTACACTTTTCTGGTATCTTATAAACTTGGTGTGTTAGGATTATTAACCAACTTAAGTCGTAGGTTATCTCTCTGGAGTTGGAAAAGTAGACTTTACAATCATCTGGCTGCGTGCTTGAAAGTTAGGGTCCAATAATGAAGCACTGTTGGCAATCTAATGAAGAAAACATATTTTTCTTTATTTGTTTTTCATATTTGAGATATGGTGCAGGTATATTAACATGATGATTTCATTTTCAATGTATTTTTATTTTATTTTATCAAATTTTATCTCAGAGCTCCTCGAATCCAGTGCCAAGAGCTGGAGTTGCTTCAACAATGCCAAAAATTAAAAAGCCAGTGCTAAAGAGCTCTCTTCATAGTGGTGCAAGTAATCCAATAACGAGAAGTCAACCAGCTAGTGTTGGGACTTCAAAATCTATGCAAGAAGTTTCTGATGGATACGATCCGAAATTGGTTGAAATGATAAATACTGCTATAGTGGATCGGAGTCCTTCTGTGAAATGGGATGATATTGGTAATGCATTCATTCCCTTCATCTTCGCATATACTGCATTTTATTTCAATCTTTTTCTTTTGTACTTGTACTCTTTAATTGGACACTGATTAGTCTGGTTTGGTTGTAGCTGGACTTCAAAAGGCAAAGCAAGCTCTATTGGAGATGGTTATTTTGCCCACAAAGAGAAGAGACTTATTCACTGGTCTCCGAAAGCCTGCTAGAGGTAGTGCTTTTAGAAACTCTCACTATAGTTCTCTCCTAATACTTCTTTCAAGAGTGAAATAAAGTGCCATTCCATCTTACGCAAAATGGGTGCTGTGTCAAGTTTCATGGGTCTACACATCATGCATTACTAGAAGTTTGTGGTTCGGTTTGAAACAATAAGAACGATTATATTTGGTTTGAATGTTTTCTAAATGGGTAATTCAAGTTGAAATTTTTTTATCTGATTAACGGAGTCGTAGGTTGCAAGACAAATTACAGCAAACGAGATGGTGTTCTAACATTTCAACTTGTCTGAGAAGCTAGTCTAATGCTGCCGTGTCTCATCATTGTCAACCCCCCCCCCCCCCCGATTAGTTGGATTTTTCAGTCCTCCATCTGATGACCAAATCGATCTTAAATTTTATTAACACATGTAGTTTCATAACTTATATTTGGGGAGACCTCCTGTGAAATGACCTTTTTATTTTATGGATGTCTCGGGGGTACTTATCTTTAGAATTATTTGTCAAATTGGCATTTATTGCTAAGCAATCATCTTTCTCTGTAATATACCATGATATCAGCACAATCTTAAGTTTTTAACATATTCATTTCAATATTTTTCATCTATTCTTTTACTTCCAAAAAAAACATGTCAAGTACCTCCTCTTCTTACGAGTTCACCCTTTCTTTAAAGTTTACAACGTGTTAGAGCCGAGCTTCTGGAGATTTTTAGGAATTTAATCTCATTAACTGTTTTTGTGGATCCAACATTAACACATGTTTCCTCAGGTCTTCTTCTCTTTGGTCCCCCCGGTAATGGGAAGACTATGCTTGCTAAAGCCGTAGCTTCAGAATCAGAAGCTACTTTTTTTAACGTGTCTGCTGCATCCTTAACATCAAAATGGGTATGCCTCAATTCCATTTCAAGAATTATATTTTCCTTGTGGAAAAAATTCTTTCGTGCATTTCCCTTGATCCCTTTCTGTTATTTTTCTGTGCAAATTTTAATCAGTTGTATTTGCTCTAAGGTAGGGGAAAGTGAAAAACTTGTACGGACTCTCTTCATGGTTGCTAAGTCCAGGCAGCCCTCCGTAATTTTCATGGATGAAGTATGTCTCATTCTCTTGCTAAACGATTATTTTAAGGATGAGTTAATAGTACATTGTTTTTGGATGCTTAATTCTTCTGTTTAGTTTTGTTTTGAGTGCATTGTAGTTTTTGGTTGTTGACATGAAACTAGATAAATCACAGAATGCTTTTAAAATGTTAGATGGCAACAAATGAACTTTTGGATGCTGAAAATAGTTTTTTTTCCTGCTTTGCTGAGTTGCTTTCTGCCATTACAACCAGAGAACTTGAAACTTGAGCTACTATATTTATATATTTGTGTATATTTTGTTAGTACCTTTACTATGGGTTGATAACATTTCACATAAATTTCATTCTTGTTAATAACTATTTCAAAATTTAGTAGAATTATTTAATCCTCTAGAATTTTCTCCCTTTGTTCATATTAGAATCTCCTTGACCTGCAAAGACTGGTTAGTTTGTGAAAATCTAATTTTATCTATTCAGTATAGTAACTGAGACTTGATGCACAGAATGCCATGTAAAATGACTAAAAAAGCATGTAAATTATCTGGAAGGAAACGACCTTAGACAAAATACTGCTAAGTGAAGGTGCCTTTCAAATGCTTGTCCTTTAGAGAAAATATGTACTTCATATTGATAATAATAATACTATGGAATTAATAAATGCTAAGCATATCTCTACCTGTGTTTTTGAATGTCAAGCAATCAATGGTTTATTTTGCAGGTTATTTGCTTTGTGCAACATAATTGATGACATTCTGCTTTTCATTTGTCATTTGACTGTGCAGATTGACAGTGTCATGTCAGCAAGGCATGCTAATGAAAATGAAGCTAGCAGGAGGCTGAAGTCTGAGTTTCTAGTACAGTTTGATGGAGTAACATCCAATTCTACTGATCTCGTAATCGTAATTGGTAAGCTTTGGTAGAGCTAAATGCTATTCCTTCTTTGGCAATTCCTTGGTTTATATGGAAGGAGAGGAATGACAATCGTTTGACTCTGAAAAGGATTGGTTGCAATTTTGACAAAAGTCTAATTTCTGACATTTCTATGTGTCTCTTTGTCTAAAGGGGTTTATTTATTTAACTATTGACGTATTACACATTAAGCAAAAGTGAAACATAATATAACTATTGACTTTTAACTCTCAATCGCCATTTGATTACCATTTGGTTTTTTGCTAGGTTGTTTTTTAAGTTTTTTTTTTTCCATCCGATATTCAAGGTCTTATGCTTTTGTGCAGGTGCTACTAATAAGCCACAAGAACTGGATGATGCAGTTCTCAGGAGATTGGTATGTGAACTTAGTGGGTCCTTTTTTTTCTTTTTTTTTTTTTTTTAAATATATATATGAGAAACCAAGTTTTCATTGAGAAAAAATGGCGTAAAAAAGAGTCAAACAAGAGGAGTCCTATCAAATAATGGGATTCCACTCCAAAAGAATCAAACCAAGATGATAATTACAAAAGTCCCGAGAAATAGAATCCCACAAAGAAGTATTTAATATAAGGGTATCCTAGACTTCTTTCCAAGAACTGTCAATTGAAGTGAATAGTCCCCATGTATGTTGTTTTTATCGTTGGCTGCCCCAAGGTTTTGAGATAACAAATGAGTTATGTGACTATTTAAGTTAATGATCATGATATAGTCTGTACTCAGTTTTGAATCCTGACTATTACACACTGATTAAAAATATTTTTGAAGATGAGCAAGAATTTTTCGATATGAAAATGCTCTCTTTTTCTCACTCGCACACTCTCATATTGGCATGCATATCTGATTAGTGCGATGAACGTAGCTATTACATTAGCCAAACACAACGTCCTTTATGTAGTTTACTTCACTAAAAGCTTTCTATGTAGTCATAATAATACTACTAATAATAATAATACAGGTGAAGAGAATTTACATTCCCTTGCCAGATGGAAATGGTAGAAGACTTCTTCTCAAGCACAAGCTCAAGGGACAGTCATTTTCTCTACCAAGTAAGAAAGAGGTTTTAGTGAAGTTCCCGTGAGATATTCCCTTAAAAAATTTACTACTTTATTGTAAATATTTTATGTTCTCTAACACCACCGCCCGCCCTTCTCTTCTCTTTTCACGAAAATGTGTATATAACACTAAAAAAAAGTTATTTGATTCCATAAACATTGTAAAGTCTGCTAAGTGGCTGAAGGAAGTTGTAAACTTTTATGTAAGTTTATGAGTTGAAATTATGGTAGTGAGTAGTGACTTACCAAATATTAAACATTCAACAGCTTTAACTCTTTATTGTAAGGCAATAGGGTGATGGTCCTATGGGATTGGTCAGTTTGCATGTTAGCTAATGGTTATGACTGTGAACTTCAAATACCTCTCTCCGCCCGGTTAACAGTACCACAAGCCCATACCTATTAACTATTTCATAATTGTCATTTATGTTCATCCAAATTCAGCCTTTTACTGTAATTAATACTTCCAAGCGTTTTTTGTTCAACAATCGTGGAGTGGGGATTGAACCATCAACTTTTAGAATGGTAATTGGTAACTTATTCAATGAGCTATGCTTGGGCGGACAGTACTTTTGAGGTCTGATTGATTAATTTAGTGTGCTATTTAGATAGTATGTCATGTTCTGATCAATTGCTTATATTGCATTGTCGATCATACTTTTATTTTCTAATGGAATGTGTTCTTCCGCTCTATATGTTTATCCCTTCTGCCAAACCTTTATTTATTTATTTATTTATTGCTAATTTACTTTGATTAACATACATGCCTCATTTTCCTTGACAGGTAGAGATCTAGAGAGACTAGTTACACAGACTGAAGGTACTATACTTCTTTCCCTAAATTTTGTAATCTTTCAGTACTTCACTAGTCGAGAAATTTGCGTGACTTTAAGAACAGCGTGGACGGAGTCTTTGTGCACGTGGGAAACTTTCAGAGCTATTTACTTTTAAATAAGAAACCAAACTTCTATTAAGAATAAGAACACAGACGTTAGAAGTTAGAACTAGAATGGCCATGCTGAAATCCGGAAATGTTAAACAAAAGTTTTTCCCTTGCATCTCGGTCACTTTTACTTTTTCGGGTATCAAAACAAAAGGAAGTATTTGTTCCGAGTATCTGACTGGATTTAGCAGAACAAATAAGGAACATTTGCAAGTAGGAACTCTCATGGTTAGTGATCAAGAACATGGTTGCATAGGAATGCCCTGAAAAAAGCTAGAAACAGACGCCACACTCGGAGTTTCCTCCCTCTTAAACTCGTATCCTGGAAAACCTTTTGAGTTCTCTTACCAGGTTCTTCACATAATAGATAAAACCCCATCTCGTTGGAGAGTGAATCTTAACGACTTGGATCTCGAGCCAAAAAAAAAAAAAAATCTCATGGTATTATTTACATGTACAGGATACTCTGGAAGTGATCTACAGGCCTTGTGCGAGGAAGCTGCAATGATGCCAATTAGGGAGCTAGGTGGGAACATTCTCACAGTAAAGGCAGATCAGGTGACTCACATAAAAACTGTTCTTATACTTTTAAACTCTGTGAACTGGCCCGACACTCACTGATACTAATAAAAAGAACTCTGAAGTTGACTTGTTAATCAGATAATCTTATCTGTTACGGTGTAATATCATGCAAAAACTGTGTCTAATTCCCTTAGATTGACTATATAGAAGCAGATGAGTAGTAGCGTGCGTTTTATAGTAGCTTGTTCGGAGAGACTCGTGCATTTTGAACTGCCTGAGACTTGTCTCATTTCCTCTCATTTTGTGCATTCGAGTCATTAAACTTCGATTATCATATCATAATTTTACCAGTTACAGGGTAATATCATGCATTAGAGTGATTACATAGAATGAGATAAGAAGTGTGCGTTTTATAGTAGCTTGTTCGGAGAGACCTGGGCATTTTGAACTGCCTGAGACTTGTCTCCTTCCCTTTCATTTTGCGCATTCGAGATCATTAAACTTCGATTATCATATCATAATCTTACCCGTTACAGGGTAATATCATGCAAACGTTGTGTCTAATTCCATTAGTGTGATTATATAGAAGCAGTGCGTTTTATAGTAGCTTCTTAGGAAAAACGAGCGTTTTGAACTGCATGAGACTTGTCTCCTTCCCTTTCATTTTGCGCATTCGAGATCATTAAACTTCGATTATCATATCATAATCTTAGCTCTAATACAGGGTAATCTCATGCAAACATCGTGTCTAAAACTGAAAATTTACATCTTTTGTGCACCAGATAAGATCATTAAAGTACGAAGATTTCCAGGAGGCAATGAAAGTGATCAGGCCCAGTCTAAACAAAAGCAGGTGGCAGGAGCTTGAACAATGGAACCAAAGTTTTGGATCCAATTAGACAATGAAGAAATATTCAGTGTATGTTAGAGGCAGCTGTTGTTGTGAAGTACACACTGTACAGCCTTACCTTCAAACAAACTTCTATTCTTTGTTTTCTTGTTTAGTAAATTAATTAAAAAATAATTACGAAATATATTGATATGGAAATCAACCCAAGGGAAAGTATGGAACGGATTACTTTGTTGATCGAATATCTCAAGACAAGAACATTGTTTGAGATTCGAATCACTTCACAAGCAAGATCGATCATGTCTAGCTTGAATGATTCTTGTCGATCGAATATCTTAACGTAAGAACACTTGTTTGAGATTCAAATTACTCCACAAGCAAGATTGA

mRNA sequence

ATGAGTTTTTTCAGAGGTGTAGCTGACTATATTGGATCGATCTTCTCAGAAGCGAGCTCAATTCACGATTTGTCGCAGAATCGTGGCCGCGAGGGTGCTTCAACCATGGAGGGCGTTAATGGGATTCCTGTTTCGAACGAGCGCTATGCTTCCAAGCTCAAAGGGTACTTCGATTTGTCCAAGGAGGAGATCGCCAAGGCCGTCAGAGCGGAGGAGTGGGGCTTGATCGACGATGCCATCCTGCACTACCAGAATGCGCTGCGTATTCTGGCTGAGGCCAGTTCAACCACCGTGCCCTCGTTTATCAGTTCTAGCGAACAAGAGAAGGTGAAATCTCATAGACAAAAGATATCAAAGTGGCAAAGTCAAGTTTCTGAGAGATTACAAGCTCTAAATATGCGAGCAGGTGTTACATCCTCAAACAAGAGCTCCTCGAATCCAGTGCCAAGAGCTGGAGTTGCTTCAACAATGCCAAAAATTAAAAAGCCAGTGCTAAAGAGCTCTCTTCATAGTGGTGCAAGTAATCCAATAACGAGAAGTCAACCAGCTAGTGTTGGGACTTCAAAATCTATGCAAGAAGTTTCTGATGGATACGATCCGAAATTGGTTGAAATGATAAATACTGCTATAGTGGATCGGAGTCCTTCTGTGAAATGGGATGATATTGCTGGACTTCAAAAGGCAAAGCAAGCTCTATTGGAGATGGTTATTTTGCCCACAAAGAGAAGAGACTTATTCACTGGTCTCCGAAAGCCTGCTAGAGGTCTTCTTCTCTTTGGTCCCCCCGGTAATGGGAAGACTATGCTTGCTAAAGCCGTAGCTTCAGAATCAGAAGCTACTTTTTTTAACGTGTCTGCTGCATCCTTAACATCAAAATGGGTAGGGGAAAGTGAAAAACTTGTACGGACTCTCTTCATGGTTGCTAAGTCCAGGCAGCCCTCCGTAATTTTCATGGATGAAATTGACAGTGTCATGTCAGCAAGGCATGCTAATGAAAATGAAGCTAGCAGGAGGCTGAAGTCTGAGTTTCTAGTACAGTTTGATGGAGTAACATCCAATTCTACTGATCTCGTAATCGTGAAGAGAATTTACATTCCCTTGCCAGATGGAAATGGTAGAAGACTTCTTCTCAAGCACAAGCTCAAGGGACAGTCATTTTCTCTACCAAGTAGAGATCTAGAGAGACTAGTTACACAGACTGAAGGATACTCTGGAAGTGATCTACAGGCCTTGTGCGAGGAAGCTGCAATGATGCCAATTAGGGAGCTAGGTGGGAACATTCTCACAGTAAAGGCAGATCAGATAAGATCATTAAAGTACGAAGATTTCCAGGAGGCAATGAAAGTGATCAGGCCCAGTCTAAACAAAAGCAGGTGGCAGGAGCTTGAACAATGGAACCAAAGTTTTGGATCCAATTAGACAATGAAGAAATATTCAGTGTATGTTAGAGGCAGCTGAATCACTTCACAAGCAAGATCGATCATGTCTAGCTTGAATGATTCTTGTCGATCGAATATCTTAACGTAAGAACACTTGTTTGAGATTCAAATTACTCCACAAGCAAGATTGA

Coding sequence (CDS)

ATGAGTTTTTTCAGAGGTGTAGCTGACTATATTGGATCGATCTTCTCAGAAGCGAGCTCAATTCACGATTTGTCGCAGAATCGTGGCCGCGAGGGTGCTTCAACCATGGAGGGCGTTAATGGGATTCCTGTTTCGAACGAGCGCTATGCTTCCAAGCTCAAAGGGTACTTCGATTTGTCCAAGGAGGAGATCGCCAAGGCCGTCAGAGCGGAGGAGTGGGGCTTGATCGACGATGCCATCCTGCACTACCAGAATGCGCTGCGTATTCTGGCTGAGGCCAGTTCAACCACCGTGCCCTCGTTTATCAGTTCTAGCGAACAAGAGAAGGTGAAATCTCATAGACAAAAGATATCAAAGTGGCAAAGTCAAGTTTCTGAGAGATTACAAGCTCTAAATATGCGAGCAGGTGTTACATCCTCAAACAAGAGCTCCTCGAATCCAGTGCCAAGAGCTGGAGTTGCTTCAACAATGCCAAAAATTAAAAAGCCAGTGCTAAAGAGCTCTCTTCATAGTGGTGCAAGTAATCCAATAACGAGAAGTCAACCAGCTAGTGTTGGGACTTCAAAATCTATGCAAGAAGTTTCTGATGGATACGATCCGAAATTGGTTGAAATGATAAATACTGCTATAGTGGATCGGAGTCCTTCTGTGAAATGGGATGATATTGCTGGACTTCAAAAGGCAAAGCAAGCTCTATTGGAGATGGTTATTTTGCCCACAAAGAGAAGAGACTTATTCACTGGTCTCCGAAAGCCTGCTAGAGGTCTTCTTCTCTTTGGTCCCCCCGGTAATGGGAAGACTATGCTTGCTAAAGCCGTAGCTTCAGAATCAGAAGCTACTTTTTTTAACGTGTCTGCTGCATCCTTAACATCAAAATGGGTAGGGGAAAGTGAAAAACTTGTACGGACTCTCTTCATGGTTGCTAAGTCCAGGCAGCCCTCCGTAATTTTCATGGATGAAATTGACAGTGTCATGTCAGCAAGGCATGCTAATGAAAATGAAGCTAGCAGGAGGCTGAAGTCTGAGTTTCTAGTACAGTTTGATGGAGTAACATCCAATTCTACTGATCTCGTAATCGTGAAGAGAATTTACATTCCCTTGCCAGATGGAAATGGTAGAAGACTTCTTCTCAAGCACAAGCTCAAGGGACAGTCATTTTCTCTACCAAGTAGAGATCTAGAGAGACTAGTTACACAGACTGAAGGATACTCTGGAAGTGATCTACAGGCCTTGTGCGAGGAAGCTGCAATGATGCCAATTAGGGAGCTAGGTGGGAACATTCTCACAGTAAAGGCAGATCAGATAAGATCATTAAAGTACGAAGATTTCCAGGAGGCAATGAAAGTGATCAGGCCCAGTCTAAACAAAAGCAGGTGGCAGGAGCTTGAACAATGGAACCAAAGTTTTGGATCCAATTAG

Protein sequence

MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYFDLSKEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQKISKWQSQVSERLQALNMRAGVTSSNKSSSNPVPRAGVASTMPKIKKPVLKSSLHSGASNPITRSQPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNSTDLVIVKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQELEQWNQSFGSN

Homology

[Close]

BLAST of Carg23893 vs. NCBI nr
Match: XP_022938685.1 (spastin [Cucurbita moschata])

HSP 1 Score: 880.2 bits (2273), Expect = 3.2e-252
Identity = 467/491 (95.11%), Postives = 469/491 (95.52%), Query Frame = 0


Query: 1   MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYFDLS 60
           MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYF+LS
Sbjct: 1   MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYFELS 60

Query: 61  KEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQKISKW 120
           KEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQKISKW
Sbjct: 61  KEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQKISKW 120

Query: 121 QSQVSERLQALNMRAGVTSSNKSSSNPVPRAGVASTMPKIKKPVLKSSLHSGASNPITRS 180
           QSQVSERLQALNMRAGVTSSNKSSSN VPRAGVASTMPKIKKPV+KSSLHSGASNPITRS
Sbjct: 121 QSQVSERLQALNMRAGVTSSNKSSSNQVPRAGVASTMPKIKKPVVKSSLHSGASNPITRS 180

Query: 181 QPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT 240
           QPASVGTSKSMQE SDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT
Sbjct: 181 QPASVGTSKSMQEASDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT 240

Query: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKL 300
           KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKL
Sbjct: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKL 300

Query: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNSTDLVI- 360
           VRTLFMVAKSRQPSVIFMDEIDSVMS RHANENEASRRLKSEFLVQFDGVTSNSTDLVI 
Sbjct: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSTRHANENEASRRLKSEFLVQFDGVTSNSTDLVIV 360

Query: 361 ------------------VKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTE 420
                             VKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTE
Sbjct: 361 IGATNKPQELDDAVLRRLVKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTE 420

Query: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQE 473
           GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQE
Sbjct: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQE 480

[Close]

BLAST of Carg23893 vs. NCBI nr
Match: XP_023540720.1 (spastin isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 879.4 bits (2271), Expect = 5.4e-252
Identity = 467/491 (95.11%), Postives = 469/491 (95.52%), Query Frame = 0


Query: 1   MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYFDLS 60
           MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYF+LS
Sbjct: 1   MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYFELS 60

Query: 61  KEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQKISKW 120
           KEEIAKAVRAEEWGLIDDAILHYQNA RILAEASSTTVPSFISSSEQEKVKSHRQKISKW
Sbjct: 61  KEEIAKAVRAEEWGLIDDAILHYQNAQRILAEASSTTVPSFISSSEQEKVKSHRQKISKW 120

Query: 121 QSQVSERLQALNMRAGVTSSNKSSSNPVPRAGVASTMPKIKKPVLKSSLHSGASNPITRS 180
           QSQVSERLQALNMRAGVTSSNKSSSN VPRAGVASTMPKIKKPVLKSSLHSGASNPITRS
Sbjct: 121 QSQVSERLQALNMRAGVTSSNKSSSNQVPRAGVASTMPKIKKPVLKSSLHSGASNPITRS 180

Query: 181 QPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT 240
           QPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT
Sbjct: 181 QPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT 240

Query: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKL 300
           KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKL
Sbjct: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKL 300

Query: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNSTDLVI- 360
           VRTLFMVAKSRQPSVIFMDEIDSVMS RHANENEASRRLKSEFLVQFDGVTSNSTDLVI 
Sbjct: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSTRHANENEASRRLKSEFLVQFDGVTSNSTDLVIV 360

Query: 361 ------------------VKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTE 420
                             VKRIYIPLPDGNGRRLLLKH+LKGQSFSLPSRDLERLVTQTE
Sbjct: 361 IGATNKPQELDDAVLRRLVKRIYIPLPDGNGRRLLLKHRLKGQSFSLPSRDLERLVTQTE 420

Query: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQE 473
           GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQE
Sbjct: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQE 480

[Close]

BLAST of Carg23893 vs. NCBI nr
Match: XP_023540722.1 (spastin isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 813.1 bits (2099), Expect = 4.8e-232
Identity = 432/456 (94.74%), Postives = 434/456 (95.18%), Query Frame = 0


Query: 36  MEGVNGIPVSNERYASKLKGYFDLSKEEIAKAVRAEEWGLIDDAILHYQNALRILAEASS 95
           MEGVNGIPVSNERYASKLKGYF+LSKEEIAKAVRAEEWGLIDDAILHYQNA RILAEASS
Sbjct: 1   MEGVNGIPVSNERYASKLKGYFELSKEEIAKAVRAEEWGLIDDAILHYQNAQRILAEASS 60

Query: 96  TTVPSFISSSEQEKVKSHRQKISKWQSQVSERLQALNMRAGVTSSNKSSSNPVPRAGVAS 155
           TTVPSFISSSEQEKVKSHRQKISKWQSQVSERLQALNMRAGVTSSNKSSSN VPRAGVAS
Sbjct: 61  TTVPSFISSSEQEKVKSHRQKISKWQSQVSERLQALNMRAGVTSSNKSSSNQVPRAGVAS 120

Query: 156 TMPKIKKPVLKSSLHSGASNPITRSQPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSP 215
           TMPKIKKPVLKSSLHSGASNPITRSQPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSP
Sbjct: 121 TMPKIKKPVLKSSLHSGASNPITRSQPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSP 180

Query: 216 SVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVAS 275
           SVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVAS
Sbjct: 181 SVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVAS 240

Query: 276 ESEATFFNVSAASLTSKWVGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEA 335
           ESEATFFNVSAASLTSKWVGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMS RHANENEA
Sbjct: 241 ESEATFFNVSAASLTSKWVGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSTRHANENEA 300

Query: 336 SRRLKSEFLVQFDGVTSNSTDLVI-------------------VKRIYIPLPDGNGRRLL 395
           SRRLKSEFLVQFDGVTSNSTDLVI                   VKRIYIPLPDGNGRRLL
Sbjct: 301 SRRLKSEFLVQFDGVTSNSTDLVIVIGATNKPQELDDAVLRRLVKRIYIPLPDGNGRRLL 360

Query: 396 LKHKLKGQSFSLPSRDLERLVTQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIR 455
           LKH+LKGQSFSLPSRDLERLVTQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIR
Sbjct: 361 LKHRLKGQSFSLPSRDLERLVTQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIR 420

Query: 456 SLKYEDFQEAMKVIRPSLNKSRWQELEQWNQSFGSN 473
           SLKYEDFQEAMKVIRPSLNKSRWQELEQWNQSFGSN
Sbjct: 421 SLKYEDFQEAMKVIRPSLNKSRWQELEQWNQSFGSN 456

[Close]

BLAST of Carg23893 vs. NCBI nr
Match: XP_022974154.1 (spastin [Cucurbita maxima])

HSP 1 Score: 812.4 bits (2097), Expect = 8.2e-232
Identity = 444/505 (87.92%), Postives = 451/505 (89.31%), Query Frame = 0


Query: 1   MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYFDLS 60
           MSFFRGVA+YIGSIFSE SSIHDLSQNRGRE ASTMEGVNGIPVSNERYASKLKGYFDLS
Sbjct: 1   MSFFRGVAEYIGSIFSEVSSIHDLSQNRGRESASTMEGVNGIPVSNERYASKLKGYFDLS 60

Query: 61  KEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQ----- 120
           KEEIAKAVRAEEWGLIDDAILHYQNA RILAEASSTTVPS ISSSEQEKVKSHRQ     
Sbjct: 61  KEEIAKAVRAEEWGLIDDAILHYQNAQRILAEASSTTVPSSISSSEQEKVKSHRQIWSCN 120

Query: 121 -------KISKWQSQVSERLQA--LNMRAGVTSSNKSSSNPVPRAGVASTMPKIKKPVLK 180
                   +  +   ++  L    L+  +GVTSSNKSSSN VPRAGVASTMPKIKKPVLK
Sbjct: 121 NLIYFIHDVLGFGHLITYNLSLIFLSSNSGVTSSNKSSSNQVPRAGVASTMPKIKKPVLK 180

Query: 181 SSLHSGASNPITRSQPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQ 240
           SSL  GASNPITRSQPASVGTSKSMQE SDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQ
Sbjct: 181 SSL--GASNPITRSQPASVGTSKSMQEASDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQ 240

Query: 241 KAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSA 300
           KAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSA
Sbjct: 241 KAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSA 300

Query: 301 ASLTSKWVGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQ 360
           ASLTSKWVGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMS RHANENEASRRLKSEFLVQ
Sbjct: 301 ASLTSKWVGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSTRHANENEASRRLKSEFLVQ 360

Query: 361 FDGVTSNSTDLVI-------------------VKRIYIPLPDGNGRRLLLKHKLKGQSFS 420
           FDGVTSNSTDLVI                   VKRIYIPLPDGNGRRLLLKHKLKGQSFS
Sbjct: 361 FDGVTSNSTDLVIVIGATNKPQELDDAVLRRLVKRIYIPLPDGNGRRLLLKHKLKGQSFS 420

Query: 421 LPSRDLERLVTQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAM 473
           LPSRDLERLVTQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAM
Sbjct: 421 LPSRDLERLVTQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAM 480

[Close]

BLAST of Carg23893 vs. NCBI nr
Match: XP_022146967.1 (spastin [Momordica charantia] >XP_022146968.1 spastin [Momordica charantia])

HSP 1 Score: 798.1 bits (2060), Expect = 1.6e-227
Identity = 424/492 (86.18%), Postives = 445/492 (90.45%), Query Frame = 0


Query: 1   MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYFDLS 60
           M FFRGV +Y+GSIFSE SSIH+  QN  REGASTM+GVNG+PV NERYASKLKGYFDL+
Sbjct: 1   MDFFRGVVEYVGSIFSETSSIHESPQNPSREGASTMDGVNGVPVLNERYASKLKGYFDLA 60

Query: 61  KEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQKISKW 120
           KEEIAKAVRAEEWG+IDDAILHYQNA RIL EASST VPSFISSSEQEKVKSHRQKIS+W
Sbjct: 61  KEEIAKAVRAEEWGIIDDAILHYQNAQRILTEASSTPVPSFISSSEQEKVKSHRQKISRW 120

Query: 121 QSQVSERLQALNMRAGVTSSNKSSSNPVPRAGVASTMPKIKKPVLKSSLHSGASNPITRS 180
           QSQVSERLQALNMRAGVTS+NK S N V R G+ASTM   KKPVL+SS +SGASN ITRS
Sbjct: 121 QSQVSERLQALNMRAGVTSTNKFSLNHVQRTGIASTMSNAKKPVLRSSSYSGASNSITRS 180

Query: 181 QPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT 240
           QPA+VGTSKS+Q+V DGYDPKLVEMINTAIVD+SPSVKWDDIAGLQKAKQALLEMVILPT
Sbjct: 181 QPANVGTSKSVQQVPDGYDPKLVEMINTAIVDQSPSVKWDDIAGLQKAKQALLEMVILPT 240

Query: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKL 300
           KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKW+GESEKL
Sbjct: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWLGESEKL 300

Query: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNS-TDLVI 360
           VRTLFMVAKSRQPSVIFMDEIDSVMS RHANENEASRRLKSEFLVQFDGVTSNS TDLVI
Sbjct: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSTRHANENEASRRLKSEFLVQFDGVTSNSTTDLVI 360

Query: 361 -------------------VKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQT 420
                              VKRIYIPLPD NGRRLLLKHKLKGQSFSLPSRDLERLV QT
Sbjct: 361 VIGATNKPQELDDAVLRRLVKRIYIPLPDENGRRLLLKHKLKGQSFSLPSRDLERLVIQT 420

Query: 421 EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQ 473
           EGYSGSDLQALCEEAAMMPIRELGGNILTV A+QIR+LKY DFQEAMKVIRPSLNKSRW+
Sbjct: 421 EGYSGSDLQALCEEAAMMPIRELGGNILTVNANQIRALKYADFQEAMKVIRPSLNKSRWE 480

[Close]

BLAST of Carg23893 vs. TAIR10
Match: AT2G45500.1 (AAA-type ATPase family protein)

HSP 1 Score: 584.3 bits (1505), Expect = 6.6e-167
Identity = 315/492 (64.02%), Postives = 379/492 (77.03%), Query Frame = 0


Query: 1   MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYFDLS 60
           MSF RG+ D   SI +E S   D S +     + +M G++G+PV+NER A KLKGYFDL+
Sbjct: 1   MSFLRGIIDSFSSILNEESK-KDPSVSSSSTSSESMNGIDGVPVTNERIAYKLKGYFDLA 60

Query: 61  KEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQKISKW 120
           KEEIAK VRAEEWGL DDA+LHY+NA RI+ EA+ST  PS+ISSSE+EKV+S+R+KIS W
Sbjct: 61  KEEIAKGVRAEEWGLHDDALLHYRNAQRIMNEATSTPSPSYISSSEKEKVRSYREKISNW 120

Query: 121 QSQVSERLQALNMRAGV-TSSNKSSSNPVPRAGVASTMPKIKKPVLKSSLHSGASNPITR 180
           Q+QVSERLQAL  R GV  S NK +      A V+ST  + +K + + +  +       R
Sbjct: 121 QNQVSERLQALGKRTGVGMSENKRTVAYPSSASVSSTASRYRKTLSQKTPVARGGVATPR 180

Query: 181 SQPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILP 240
           +   +  + K ++E  + YD KLVEMINT IVDRSPSVKWDD+AGL  AKQALLEMVILP
Sbjct: 181 NPKDAAASPKPVKESGNVYDDKLVEMINTTIVDRSPSVKWDDVAGLNGAKQALLEMVILP 240

Query: 241 TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEK 300
            KRRDLFTGLR+PARGLLLFGPPGNGKTMLAKAVASES+ATFFNVSA+SLTSKWVGE+EK
Sbjct: 241 AKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEK 300

Query: 301 LVRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNSTDLVI 360
           LV+TLF VA SRQPSVIFMDEIDS+MS R  +ENEASRRLKSEFL+QFDGVTSN  DLVI
Sbjct: 301 LVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEASRRLKSEFLIQFDGVTSNPDDLVI 360

Query: 361 -------------------VKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQT 420
                              VKRIY+PLPD N R+LL K KLK Q  SL   D++++V +T
Sbjct: 361 IIGATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDKIVKET 420

Query: 421 EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQ 473
           EGYSGSDLQALCEEAAMMPIRELG NILT++A+++RSL+Y+DF+++M VIRPSL+KS+W+
Sbjct: 421 EGYSGSDLQALCEEAAMMPIRELGANILTIQANKVRSLRYDDFRKSMAVIRPSLSKSKWE 480

[Close]

BLAST of Carg23893 vs. TAIR10
Match: AT3G27120.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 264.6 bits (675), Expect = 1.2e-70
Identity = 138/309 (44.66%), Postives = 203/309 (65.70%), Query Frame = 0


Query: 186 GTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPTKRRDL 245
           G    + E     +P+L+E ++  I+DR P+V+WDDIAGL+ AK+ + EMVI P  R D+
Sbjct: 165 GPDGELPEKLRNLEPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDI 224

Query: 246 FTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKLVRTLF 305
           F G R P +GLLLFGPPG GKTM+ KA+A E++ATFF +SA+SLTSKW+GE EKLVR LF
Sbjct: 225 FKGCRSPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALF 284

Query: 306 MVAKSRQPSVIFMDEIDSVMSARHAN-ENEASRRLKSEFLVQFDGVTSNSTDLVIV---- 365
            VA  RQP+VIF+DEIDS++S R ++ E+E+SRRLK++FL++ +G  S S  ++++    
Sbjct: 285 GVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATN 344

Query: 366 --------------KRIYIPLPDGNGRRLLLKHKLKGQS-FSLPSRDLERLVTQTEGYSG 425
                         KR+YIPLP    R  ++++ LK    F+L   D+  +   TEGYSG
Sbjct: 345 RPQELDEAARRRLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNIICNLTEGYSG 404

Query: 426 SDLQALCEEAAMMPIREL---GGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQEL 472
           SD++ L ++A M P+RE    G +I  +  D +R +  +DF++A++ +RPS++++     
Sbjct: 405 SDMKNLVKDATMGPLREALKRGIDITNLTKDDMRLVTLQDFKDALQEVRPSVSQNELGIY 464

[Close]

BLAST of Carg23893 vs. TAIR10
Match: AT1G80350.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 216.1 bits (549), Expect = 4.7e-56
Identity = 127/319 (39.81%), Postives = 191/319 (59.87%), Query Frame = 0


Query: 189 KSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPTKRRDLFTG 248
           KS + + +G D  L  M+   ++D +P V+WDD+AGL +AK+ L E V+LP    + F G
Sbjct: 208 KSKRGLYEGPDEDLAAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQG 267

Query: 249 LRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKLVRTLFMVA 308
           +R+P +G+L+FGPPG GKT+LAKAVA+E   TFFNVS+A+L SKW GESE++VR LF +A
Sbjct: 268 IRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLA 327

Query: 309 KSRQPSVIFMDEIDSVMSAR-HANENEASRRLKSEFLVQFDGVTSNSTD------LVIV- 368
           ++  PS IF+DEIDS+ ++R  + E+E+SRR+KSE LVQ DGV++ +T+      +V+V 
Sbjct: 328 RAYAPSTIFIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVL 387

Query: 369 ------------------KRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTEG 428
                             KRIYIPLPD   R+ L+   L+    +    ++E +  +TEG
Sbjct: 388 AATNFPWDIDEALRRRLEKRIYIPLPDFESRKALININLRTVEVA-SDVNIEDVARRTEG 447

Query: 429 YSGSDLQALCEEAAM----------MPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRP 472
           YSG DL  +C +A+M                      +  D +      DF+EA++ ++P
Sbjct: 448 YSGDDLTNVCRDASMXXXXXXXXXXXXXXXXXXXXXDISNDPVAMC---DFEEAIRKVQP 507

[Close]

BLAST of Carg23893 vs. TAIR10
Match: AT2G27600.1 (AAA-type ATPase family protein)

HSP 1 Score: 210.3 bits (534), Expect = 2.6e-54
Identity = 127/310 (40.97%), Postives = 176/310 (56.77%), Query Frame = 0


Query: 142 KSSSNPVPRAGVASTMPKI--KKPVLKSSLHSGASNPITRSQPASVGTSKSMQE-----V 201
           K   NP  R  +     +   +   +++ L  G S P +    A     K+  +      
Sbjct: 44  KYEKNPKIREAITQKFTEYLRRAEEIRAVLDEGGSGPGSNGDAAVATRPKTKPKDGEGGG 103

Query: 202 SDGYDP---KLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRK 261
            DG DP   KL   +N+AIV   P++KW D+AGL+ AKQAL E VILP K    FTG R+
Sbjct: 104 KDGEDPEQSKLRAGLNSAIVREKPNIKWSDVAGLESAKQALQEAVILPVKFPQFFTGKRR 163

Query: 262 PARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKLVRTLFMVAKSR 321
           P R  LL+GPPG GK+ LAKAVA+E+++TFF+VS++ L SKW+GESEKLV  LF +A+  
Sbjct: 164 PWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARES 223

Query: 322 QPSVIFMDEIDSVMSAR-HANENEASRRLKSEFLVQFDGVTSNSTDLVIV---------- 381
            PS+IF+DEIDS+   R   NE+EASRR+K+E LVQ  GV  N   ++++          
Sbjct: 224 APSIIFVDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALD 283

Query: 382 --------KRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTEGYSGSDLQALC 423
                   KRIYIPLP+   R+ + K  L     +L   D E L  +TEG+SGSD+    
Sbjct: 284 QAIRRRFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGSDVSVCV 343

[Close]

BLAST of Carg23893 vs. TAIR10
Match: AT2G34560.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 204.1 bits (518), Expect = 1.8e-52
Identity = 125/300 (41.67%), Postives = 177/300 (59.00%), Query Frame = 0


Query: 202 LVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGP 261
           L E ++  I+  +P++KW+ I GL+ AK+ L E V++P K    F GL  P +G+LLFGP
Sbjct: 94  LAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGILLFGP 153

Query: 262 PGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKLVRTLFMVAKSRQPSVIFMDEI 321
           PG GKTMLAKAVA+E   TFFN+SA+S+ SKW G+SEKL+R LF +A+   PS IF+DEI
Sbjct: 154 PGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEI 213

Query: 322 DSVMSARHA---NENEASRRLKSEFLVQFDGVTSNSTDLVIV------------------ 381
           D+++S R     +E+EASRRLK+E L+Q DG+   + +LV V                  
Sbjct: 214 DAIISQRGGEGRSEHEASRRLKTELLIQMDGL-QKTNELVFVLAATNLPWELDAAMLRRL 273

Query: 382 -KRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTEGYSGSDLQALCEEAAMMP 441
            KRI +PLPD   RR + +  +  Q    P    + LV ++EGYSGSD++ LC+EAAM P
Sbjct: 274 EKRILVPLPDPEARRGMFEMLIPSQPGDEPLPH-DVLVEKSEGYSGSDIRILCKEAAMQP 333

Query: 442 IRELGGNILTVKAD--------QIRSLKYEDFQEAMKVIRPSLNKSRWQELEQWNQSFGS 472
           +R     IL  + D        +I  +  ED   A+   RPS +       +++N  +GS
Sbjct: 334 LRRTLA-ILEDREDVVPEDELPKIGPILPEDIDRALSNTRPSAHLHA-HLYDKFNDDYGS 389

[Close]

BLAST of Carg23893 vs. Swiss-Prot
Match: sp|Q54KQ7|SPAST_DICDI (Spastin OS=Dictyostelium discoideum OX=44689 GN=DDB_G0287165 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.5e-75
Identity = 148/294 (50.34%), Postives = 198/294 (67.35%), Query Frame = 0


Query: 197 GYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRKPARGL 256
           G D  +V +I   I+DR   VKWDD+ GL K KQ+L+E VILP  R D+FTGLR P +GL
Sbjct: 361 GIDKSMVTLIMNEIMDRKNPVKWDDVVGLDKVKQSLMESVILPNLRPDVFTGLRAPPKGL 420

Query: 257 LLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKLVRTLFMVAKSRQPSVI 316
           LLFGPPGNGKTM+AKAVA ES+ TFF++S++SLTSK+VG+ EKLVR LF VA   QPS+I
Sbjct: 421 LLFGPPGNGKTMIAKAVAYESKVTFFSISSSSLTSKYVGDGEKLVRALFAVATHFQPSII 480

Query: 317 FMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNSTDLV------------------ 376
           F+DEIDS+++ R +NE+EASRRLK+E LVQFDG  +N  + V                  
Sbjct: 481 FIDEIDSLLTERSSNESEASRRLKTEILVQFDGARTNGDERVLVMGATNRPEDLDDAALR 540

Query: 377 -IVKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTEGYSGSDLQALCEEAAM 436
            +VKRIY+ LP+   R  +++H L GQ  SL  + +  L   T+GYSG DL ALC++AA 
Sbjct: 541 RLVKRIYVGLPELETRLQIIQHLLVGQRHSLTKQQINSLAEVTQGYSGFDLAALCKDAAY 600

Query: 437 MPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQELEQWNQSFGS 472
            PIR LG  I  ++ ++I  + ++DF  ++K IRPS+     +  E+WNQ FG+
Sbjct: 601 EPIRRLGIGIKDLELNEISLISFKDFANSLKQIRPSVTSQSLKSFEKWNQKFGT 654

[Close]

BLAST of Carg23893 vs. Swiss-Prot
Match: sp|Q5ZK92|SPAST_CHICK (Spastin OS=Gallus gallus OX=9031 GN=SPAST PE=2 SV=2)

HSP 1 Score: 283.1 bits (723), Expect = 5.6e-75
Identity = 168/371 (45.28%), Postives = 226/371 (60.92%), Query Frame = 0


Query: 138 TSSNKSSSNPVPRAGVASTMPKIKKP----VLKSSLHSGASNPITR-------------- 197
           TS++   S  V + G        + P    +  +S+   A+NP T               
Sbjct: 239 TSNSLPRSKTVAKTGSTGLSGHHRTPSYSGISTASVSRPAANPATSTHKAAPKNSRTNKP 298

Query: 198 SQPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILP 257
           S P      K   +V    D  L  +I   IVD  P+VK+DDIAG + AKQAL E+VILP
Sbjct: 299 STPTPAARKKKDTKVFRNVDSNLANLILNEIVDSGPAVKFDDIAGQELAKQALQEIVILP 358

Query: 258 TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEK 317
           + R +LFTGLR PARGLLLFGPPGNGKTMLAKAVA+ES ATFFN+SAASLTSK+VGE EK
Sbjct: 359 SLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEK 418

Query: 318 LVRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNSTDLVI 377
           LVR LF VA+  QPS+IF+DE+DS++  R   E++ASRRLK+EFL++FDGV S+  D ++
Sbjct: 419 LVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRIL 478

Query: 378 V-------------------KRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQT 437
           V                   KR+Y+ LP+   R +LLK+ L  Q   L  ++L +L   T
Sbjct: 479 VMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMT 538

Query: 438 EGYSGSDLQALCEEAAMMPIREL-GGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRW 471
           +GYSGSDL AL ++AA+ PIREL    +  + A ++R++K  DF E++K I+ SL+    
Sbjct: 539 DGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTL 598

[Close]

BLAST of Carg23893 vs. Swiss-Prot
Match: sp|Q6AZT2|SPAST_XENLA (Spastin OS=Xenopus laevis OX=8355 GN=spast PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 9.6e-75
Identity = 169/366 (46.17%), Postives = 230/366 (62.84%), Query Frame = 0


Query: 137 VTSSNKSSSNPVPRAGVASTMPKIKKPVLKSSLHSGASNPITR----------SQPASVG 196
           +TS++ S +   P++G           V  S+  +GA  P  R          ++PA+  
Sbjct: 231 ITSNSYSRTKAPPKSGSLGNRIPNCTSVPTSARQAGAHTPSNRGATGKNNTRTNKPATPT 290

Query: 197 TSKSMQEVSD--GYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPTKRRD 256
           T+   +++ +    D  L  +I   IVD  PSVK+ DIAG   AKQAL E+VILP+ R +
Sbjct: 291 TAVRKKDMKNLRNVDSNLANLILNEIVDSGPSVKFADIAGQDLAKQALQEIVILPSIRPE 350

Query: 257 LFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKLVRTL 316
           LFTGLR PARGLLLFGPPGNGKTMLAKAVA+ES ATFFN+SAASLTSK+VGE EKLVR L
Sbjct: 351 LFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRAL 410

Query: 317 FMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNSTDLVIV---- 376
           F VA+  QPS+IF+DE+DS++  R   E++ASRRLK+EFL++FDGV S   D V+V    
Sbjct: 411 FSVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGAT 470

Query: 377 ---------------KRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTEGYSG 436
                          KR+Y+ LP+   R +LLK+ L  Q   L  ++L +L   TEGYSG
Sbjct: 471 NRPQELDDAVLRRFTKRVYVALPNEETRLVLLKNLLSKQGNPLSEKELTQLSRLTEGYSG 530

Query: 437 SDLQALCEEAAMMPIREL-GGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQELEQ 471
           SD+ AL ++AA+ PIREL    +  + A ++R++KY DF  ++K I+ S++ S  +   +
Sbjct: 531 SDITALAKDAALGPIRELKPEQVKNMAASEMRNMKYSDFLGSLKKIKCSVSHSTLESYIR 590

[Close]

BLAST of Carg23893 vs. Swiss-Prot
Match: sp|Q7QBW0|SPAST_ANOGA (Spastin OS=Anopheles gambiae OX=7165 GN=spas PE=3 SV=6)

HSP 1 Score: 281.2 bits (718), Expect = 2.1e-74
Identity = 154/295 (52.20%), Postives = 201/295 (68.14%), Query Frame = 0


Query: 197 GYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRKPARGL 256
           G +PKLV++I   IV+    V+W DIAG + AKQAL EMVILP+ R +LFTGLR PA+GL
Sbjct: 529 GVEPKLVQIIMDEIVEGGAKVQWQDIAGQEVAKQALQEMVILPSVRPELFTGLRTPAKGL 588

Query: 257 LLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKLVRTLFMVAKSRQPSVI 316
           LLFGPPGNGKT+LA+AVA+E  ATFF++SAA+LTSK+VG+ EKLVR LF VA+  QPS+I
Sbjct: 589 LLFGPPGNGKTLLARAVATECSATFFSISAATLTSKYVGDGEKLVRALFAVARELQPSII 648

Query: 317 FMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNS-TDLVIV--------------- 376
           F+DE+DSV+S R +NE+EA+RRLK+EFLVQFDG+ +NS  D ++V               
Sbjct: 649 FIDEVDSVLSERSSNEHEATRRLKTEFLVQFDGLPANSEADRIVVMAATNRPQELDEAAL 708

Query: 377 ----KRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTEGYSGSDLQALCEEAA 436
               KR+Y+ LPD + R LLL+  L+ Q   L   DL  L   TEGYSGSDL AL  +AA
Sbjct: 709 RRFPKRVYVTLPDRDTRELLLRRLLQKQGSPLSDADLAHLAQLTEGYSGSDLTALARDAA 768

Query: 437 MMPIRELG-GNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQELEQWNQSFG 471
           + PIREL    +  +   ++RS++  DF  ++K IR S+        E+W Q FG
Sbjct: 769 LEPIRELNVEEVKNMDPTKLRSIRESDFHNSLKRIRRSVAPQSLAAYEKWLQDFG 823

[Close]

BLAST of Carg23893 vs. Swiss-Prot
Match: sp|Q9QYY8|SPAST_MOUSE (Spastin OS=Mus musculus OX=10090 GN=Spast PE=1 SV=3)

HSP 1 Score: 280.4 bits (716), Expect = 3.7e-74
Identity = 157/327 (48.01%), Postives = 215/327 (65.75%), Query Frame = 0


Query: 167 SSLHSGASNPITRSQPASVGTSKSMQEVSDGY---DPKLVEMINTAIVDRSPSVKWDDIA 226
           ++ H G   P   ++P++  T+   ++    +   D  L  +I   IVD   +VK+DDIA
Sbjct: 284 ATTHKGTPKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIA 343

Query: 227 GLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFN 286
           G + AKQAL E+VILP+ R +LFTGLR PARGLLLFGPPGNGKTMLAKAVA+ES ATFFN
Sbjct: 344 GQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFN 403

Query: 287 VSAASLTSKWVGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEF 346
           +SAASLTSK+VGE EKLVR LF VA+  QPS+IF+DE+DS++  R   E++ASRRLK+EF
Sbjct: 404 ISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEF 463

Query: 347 LVQFDGVTSNSTDLVIV-------------------KRIYIPLPDGNGRRLLLKHKLKGQ 406
           L++FDGV S   D V+V                   KR+Y+ LP+   R LLLK+ L  Q
Sbjct: 464 LIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQ 523

Query: 407 SFSLPSRDLERLVTQTEGYSGSDLQALCEEAAMMPIREL-GGNILTVKADQIRSLKYEDF 466
              L  ++L +L   T+GYSGSDL AL ++AA+ PIREL    +  + A ++R+++  DF
Sbjct: 524 GSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDF 583

Query: 467 QEAMKVIRPSLNKSRWQELEQWNQSFG 471
            E++K I+ S++    +   +WN+ FG
Sbjct: 584 TESLKKIKRSVSPQTLEAYIRWNKDFG 610

[Close]

BLAST of Carg23893 vs. TrEMBL
Match: tr|A0A1S3AVR3|A0A1S3AVR3_CUCME (spastin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483336 PE=3 SV=1)

HSP 1 Score: 783.5 bits (2022), Expect = 2.7e-223
Identity = 417/491 (84.93%), Postives = 441/491 (89.82%), Query Frame = 0


Query: 1   MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYFDLS 60
           MSF +GV DYIGSIFSE SSIHD  QNR  EGASTM+ VNG+PVSNERYASK KGYF+LS
Sbjct: 1   MSFLKGVVDYIGSIFSETSSIHDSPQNRSHEGASTMDSVNGVPVSNERYASKFKGYFNLS 60

Query: 61  KEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQKISKW 120
           +EEIAKAVRAEEWG+IDDAILHYQNA RIL EASST VPSFISSSEQEKVKS+RQKISKW
Sbjct: 61  QEEIAKAVRAEEWGIIDDAILHYQNANRILTEASSTAVPSFISSSEQEKVKSYRQKISKW 120

Query: 121 QSQVSERLQALNMRAGVTSSNKSSSNPVPRAGVASTMPKIKKPVLKSSLHSGASNPITRS 180
           QSQVS+RL  L++RAGVTSSNKSS N V RAG AS MP  KKPVL+SS HSGA+N ITRS
Sbjct: 121 QSQVSDRLATLSIRAGVTSSNKSSLNHVQRAGNASKMPN-KKPVLRSSSHSGANNSITRS 180

Query: 181 QPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT 240
           QPA+VGTS+S +EV DGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT
Sbjct: 181 QPANVGTSQSTREVPDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT 240

Query: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKL 300
           KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFN+SAAS TSKW+GESEKL
Sbjct: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNLSAASFTSKWLGESEKL 300

Query: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNSTDLVI- 360
           VRTLFMVAKSRQPSVIFMDEIDSVMS+RHA E+EASRRLKSEFLVQFDGVTSNSTDLVI 
Sbjct: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVTSNSTDLVIV 360

Query: 361 ------------------VKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTE 420
                             VKRIYIPLPD NGRRLLLKH LKGQS+SLP+RDLERLV QTE
Sbjct: 361 IGATNKPQELDDAVLRRLVKRIYIPLPDENGRRLLLKHNLKGQSYSLPTRDLERLVKQTE 420

Query: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQE 473
           GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSL+KS W+E
Sbjct: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLSKSSWKE 480

[Close]

BLAST of Carg23893 vs. TrEMBL
Match: tr|A0A0A0L4C5|A0A0A0L4C5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124960 PE=3 SV=1)

HSP 1 Score: 780.4 bits (2014), Expect = 2.3e-222
Identity = 416/492 (84.55%), Postives = 442/492 (89.84%), Query Frame = 0


Query: 1   MSFFRGVADYIGSIFSEASSIHDLSQNRGREGAST-MEGVNGIPVSNERYASKLKGYFDL 60
           MSF +GV DYIGSIFSE SSIHD  QNR  EGAST M+ VNG+PVSNERYASK KGYF+L
Sbjct: 1   MSFLKGVVDYIGSIFSETSSIHDSPQNRSHEGASTIMDSVNGVPVSNERYASKFKGYFNL 60

Query: 61  SKEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQKISK 120
           S+EEIAKAVRAEEWG+IDDAILHYQNA RIL EASST VPSFISSSEQEKVKS+RQKISK
Sbjct: 61  SQEEIAKAVRAEEWGIIDDAILHYQNANRILTEASSTAVPSFISSSEQEKVKSYRQKISK 120

Query: 121 WQSQVSERLQALNMRAGVTSSNKSSSNPVPRAGVASTMPKIKKPVLKSSLHSGASNPITR 180
           WQSQVS+RL  L++RAGVTS NKSSSN V RAG AS MP  KKPVL+SS HSGA+NPITR
Sbjct: 121 WQSQVSDRLATLSIRAGVTSPNKSSSNHVQRAGNASKMPN-KKPVLRSSSHSGANNPITR 180

Query: 181 SQPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILP 240
           SQPA+VGTS+S +EV DGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILP
Sbjct: 181 SQPANVGTSQSTREVPDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILP 240

Query: 241 TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEK 300
           TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASES+ATFFN+SAAS TSKW+GESEK
Sbjct: 241 TKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESDATFFNLSAASFTSKWLGESEK 300

Query: 301 LVRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNSTDLVI 360
           LVRTLFMVAKSRQPSVIFMDEIDSVMS+RHA E+EASRRLKSEFLVQFDGVTSNSTDLVI
Sbjct: 301 LVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVTSNSTDLVI 360

Query: 361 -------------------VKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQT 420
                              VKRIYIPLPD NGRRLLLKH LKGQS+SLP+RDLERLV QT
Sbjct: 361 VIGATNKPQELDDAVLRRLVKRIYIPLPDENGRRLLLKHNLKGQSYSLPTRDLERLVKQT 420

Query: 421 EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQ 473
           EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSL+KS W+
Sbjct: 421 EGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLSKSSWK 480

[Close]

BLAST of Carg23893 vs. TrEMBL
Match: tr|A0A1S3AWB0|A0A1S3AWB0_CUCME (spastin isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483336 PE=3 SV=1)

HSP 1 Score: 732.3 bits (1889), Expect = 7.1e-208
Identity = 390/456 (85.53%), Postives = 413/456 (90.57%), Query Frame = 0


Query: 36  MEGVNGIPVSNERYASKLKGYFDLSKEEIAKAVRAEEWGLIDDAILHYQNALRILAEASS 95
           M+ VNG+PVSNERYASK KGYF+LS+EEIAKAVRAEEWG+IDDAILHYQNA RIL EASS
Sbjct: 1   MDSVNGVPVSNERYASKFKGYFNLSQEEIAKAVRAEEWGIIDDAILHYQNANRILTEASS 60

Query: 96  TTVPSFISSSEQEKVKSHRQKISKWQSQVSERLQALNMRAGVTSSNKSSSNPVPRAGVAS 155
           T VPSFISSSEQEKVKS+RQKISKWQSQVS+RL  L++RAGVTSSNKSS N V RAG AS
Sbjct: 61  TAVPSFISSSEQEKVKSYRQKISKWQSQVSDRLATLSIRAGVTSSNKSSLNHVQRAGNAS 120

Query: 156 TMPKIKKPVLKSSLHSGASNPITRSQPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSP 215
            MP  KKPVL+SS HSGA+N ITRSQPA+VGTS+S +EV DGYDPKLVEMINTAIVDRSP
Sbjct: 121 KMPN-KKPVLRSSSHSGANNSITRSQPANVGTSQSTREVPDGYDPKLVEMINTAIVDRSP 180

Query: 216 SVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVAS 275
           SVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVAS
Sbjct: 181 SVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVAS 240

Query: 276 ESEATFFNVSAASLTSKWVGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEA 335
           ESEATFFN+SAAS TSKW+GESEKLVRTLFMVAKSRQPSVIFMDEIDSVMS+RHA E+EA
Sbjct: 241 ESEATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEA 300

Query: 336 SRRLKSEFLVQFDGVTSNSTDLVI-------------------VKRIYIPLPDGNGRRLL 395
           SRRLKSEFLVQFDGVTSNSTDLVI                   VKRIYIPLPD NGRRLL
Sbjct: 301 SRRLKSEFLVQFDGVTSNSTDLVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENGRRLL 360

Query: 396 LKHKLKGQSFSLPSRDLERLVTQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIR 455
           LKH LKGQS+SLP+RDLERLV QTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIR
Sbjct: 361 LKHNLKGQSYSLPTRDLERLVKQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIR 420

Query: 456 SLKYEDFQEAMKVIRPSLNKSRWQELEQWNQSFGSN 473
           SLKYEDFQEAMKVIRPSL+KS W+ELE+WNQSFGSN
Sbjct: 421 SLKYEDFQEAMKVIRPSLSKSSWKELEEWNQSFGSN 455

[Close]

BLAST of Carg23893 vs. TrEMBL
Match: tr|V4TXZ6|V4TXZ6_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10019901mg PE=3 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 8.5e-185
Identity = 350/491 (71.28%), Postives = 402/491 (81.87%), Query Frame = 0


Query: 1   MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYFDLS 60
           MSF + + D +GSIFS  SS  +  +N     +STM+GV G  ++NER A KLKGYF+L+
Sbjct: 1   MSFIKDIIDSLGSIFSNDSSPFESERN---PSSSTMDGVAGTSITNERTAYKLKGYFELA 60

Query: 61  KEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQKISKW 120
           KEEIAKAVRAEEWGL+DDAI+HY+NA RIL EASST VPS+IS+SE EKVKS+RQKISKW
Sbjct: 61  KEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEASSTPVPSYISTSEHEKVKSYRQKISKW 120

Query: 121 QSQVSERLQALNMRAGVTSSNKSSSNPVPRAGVASTMPKIKKPVLKSSLHSGASNPITRS 180
           QSQVS+RLQALN RAG TS++KS+S     A V+ST    +K +  +S  S  +NP+ R+
Sbjct: 121 QSQVSDRLQALNRRAGGTSTSKSTSPHAQTAAVSST-SNFRKNISPNSPRSSRNNPVVRN 180

Query: 181 QPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT 240
           Q    G+SK + E  +GYD KLVEMINTAIVDRSPSVKW+D+AGL+KAKQAL+EMVILP 
Sbjct: 181 QTEKTGSSKPLAEAGNGYDSKLVEMINTAIVDRSPSVKWEDVAGLEKAKQALMEMVILPA 240

Query: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKL 300
           KRRDLFTGLR+PARGLLLFGPPGNGKTMLAKAVASES+ATFFNVSA+SLTSKWVGE EKL
Sbjct: 241 KRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEGEKL 300

Query: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNSTDLVI- 360
           VRTLFMVA SRQP VIF+DEIDS+MS R ANEN+ASRRLKSEFL+QFDGVTSN  DLVI 
Sbjct: 301 VRTLFMVAISRQPCVIFIDEIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIV 360

Query: 361 ------------------VKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTE 420
                             VKRIY+PLPD N RRLLLKHKLKGQ+FSLP  DLERLV +TE
Sbjct: 361 MGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETE 420

Query: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQE 473
           GYSGSDLQALCEEAAMMPIRELG NILTVKA+Q+R L+YEDFQ+AM VIRPSLNKS+W+E
Sbjct: 421 GYSGSDLQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMAVIRPSLNKSKWEE 480

[Close]

BLAST of Carg23893 vs. TrEMBL
Match: tr|A0A2H5NQQ2|A0A2H5NQQ2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_063760 PE=3 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 8.5e-185
Identity = 350/491 (71.28%), Postives = 402/491 (81.87%), Query Frame = 0


Query: 1   MSFFRGVADYIGSIFSEASSIHDLSQNRGREGASTMEGVNGIPVSNERYASKLKGYFDLS 60
           MSF + + D +GSIFS  SS  +  +N     +STM+GV G  ++NER A KLKGYF+L+
Sbjct: 1   MSFIKDIIDSLGSIFSNDSSPFESERN---PSSSTMDGVAGTSITNERTAYKLKGYFELA 60

Query: 61  KEEIAKAVRAEEWGLIDDAILHYQNALRILAEASSTTVPSFISSSEQEKVKSHRQKISKW 120
           KEEIAKAVRAEEWGL+DDAI+HY+NA RIL EASST VPS+IS+SE EKVKS+RQKISKW
Sbjct: 61  KEEIAKAVRAEEWGLVDDAIIHYKNAQRILTEASSTPVPSYISTSEHEKVKSYRQKISKW 120

Query: 121 QSQVSERLQALNMRAGVTSSNKSSSNPVPRAGVASTMPKIKKPVLKSSLHSGASNPITRS 180
           QSQVS+RLQALN RAG TS++KS+S     A V+ST    +K +  +S  S  +NP+ R+
Sbjct: 121 QSQVSDRLQALNRRAGGTSTSKSTSPHAQTAAVSST-SNFRKNISPNSPRSSRNNPVVRN 180

Query: 181 QPASVGTSKSMQEVSDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPT 240
           Q    G+SK + E  +GYD KLVEMINTAIVDRSPSVKW+D+AGL+KAKQAL+EMVILP 
Sbjct: 181 QTEKTGSSKPLAEAGNGYDSKLVEMINTAIVDRSPSVKWEDVAGLEKAKQALMEMVILPA 240

Query: 241 KRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGESEKL 300
           KRRDLFTGLR+PARGLLLFGPPGNGKTMLAKAVASES+ATFFNVSA+SLTSKWVGE EKL
Sbjct: 241 KRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEGEKL 300

Query: 301 VRTLFMVAKSRQPSVIFMDEIDSVMSARHANENEASRRLKSEFLVQFDGVTSNSTDLVI- 360
           VRTLFMVA SRQP VIF+DEIDS+MS R ANEN+ASRRLKSEFL+QFDGVTSN  DLVI 
Sbjct: 301 VRTLFMVAISRQPCVIFIDEIDSIMSTRMANENDASRRLKSEFLIQFDGVTSNPNDLVIV 360

Query: 361 ------------------VKRIYIPLPDGNGRRLLLKHKLKGQSFSLPSRDLERLVTQTE 420
                             VKRIY+PLPD N RRLLLKHKLKGQ+FSLP  DLERLV +TE
Sbjct: 361 MGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVRETE 420

Query: 421 GYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKVIRPSLNKSRWQE 473
           GYSGSDLQALCEEAAMMPIRELG NILTVKA+Q+R L+YEDFQ+AM VIRPSLNKS+W+E
Sbjct: 421 GYSGSDLQALCEEAAMMPIRELGTNILTVKANQLRPLRYEDFQKAMAVIRPSLNKSKWEE 480

The following BLAST results are available for this feature:

BLAST of Carg23893 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938685.1	3.2e-252	95.11	spastin [Cucurbita moschata]	[more]
XP_023540720.1	5.4e-252	95.11	spastin isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023540722.1	4.8e-232	94.74	spastin isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022974154.1	8.2e-232	87.92	spastin [Cucurbita maxima]	[more]
XP_022146967.1	1.6e-227	86.18	spastin [Momordica charantia] >XP_022146968.1 spastin [Momordica charantia]	[more]

BLAST of Carg23893 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45500.1	6.6e-167	64.02	AAA-type ATPase family protein	[more]
AT3G27120.1	1.2e-70	44.66	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G80350.1	4.7e-56	39.81	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G27600.1	2.6e-54	40.97	AAA-type ATPase family protein	[more]
AT2G34560.2	1.8e-52	41.67	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

BLAST of Carg23893 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q54KQ7\|SPAST_DICDI	1.5e-75	50.34	Spastin OS=Dictyostelium discoideum OX=44689 GN=DDB_G0287165 PE=3 SV=1	[more]
sp\|Q5ZK92\|SPAST_CHICK	5.6e-75	45.28	Spastin OS=Gallus gallus OX=9031 GN=SPAST PE=2 SV=2	[more]
sp\|Q6AZT2\|SPAST_XENLA	9.6e-75	46.17	Spastin OS=Xenopus laevis OX=8355 GN=spast PE=2 SV=1	[more]
sp\|Q7QBW0\|SPAST_ANOGA	2.1e-74	52.20	Spastin OS=Anopheles gambiae OX=7165 GN=spas PE=3 SV=6	[more]
sp\|Q9QYY8\|SPAST_MOUSE	3.7e-74	48.01	Spastin OS=Mus musculus OX=10090 GN=Spast PE=1 SV=3	[more]

BLAST of Carg23893 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVR3\|A0A1S3AVR3_CUCME	2.7e-223	84.93	spastin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483336 PE=3 SV=1	[more]
tr\|A0A0A0L4C5\|A0A0A0L4C5_CUCSA	2.3e-222	84.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124960 PE=3 SV=1	[more]
tr\|A0A1S3AWB0\|A0A1S3AWB0_CUCME	7.1e-208	85.53	spastin isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483336 PE=3 SV=1	[more]
tr\|V4TXZ6\|V4TXZ6_9ROSI	8.5e-185	71.28	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10019901mg PE=3 ...	[more]
tr\|A0A2H5NQQ2\|A0A2H5NQQ2_CITUN	8.5e-185	71.28	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_063760 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR003959	ATPase_AAA_core
IPR007330	MIT
IPR003593	AAA+_ATPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23893-RA	Carg23893-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 252..383 e-value: 3.2E-7 score: 40.0
IPR007330	MIT	SMART	SM00745	smart	coord: 53..130 e-value: 1.2E-14 score: 64.6
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 256..359 e-value: 1.5E-30 score: 106.2
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 214..367 e-value: 6.0E-91 score: 306.6 coord: 451..467 e-value: 6.0E-91 score: 306.6
None	No IPR available	GENE3D	G3DSA:1.10.8.60		coord: 368..450 e-value: 6.0E-91 score: 306.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..194
None	No IPR available	PANTHER	PTHR23074	AAA ATPASE	coord: 360..471
None	No IPR available	PANTHER	PTHR23074:SF86	SPASTIN	coord: 44..360
None	No IPR available	PANTHER	PTHR23074:SF86	SPASTIN	coord: 360..471
None	No IPR available	PANTHER	PTHR23074	AAA ATPASE	coord: 44..360
None	No IPR available	CDD	cd02679	MIT_spastin	coord: 53..131 e-value: 3.74745E-25 score: 97.7334
None	No IPR available	CDD	cd00009	AAA	coord: 223..363 e-value: 3.92828E-18 score: 80.2679
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 215..468

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23893	Cla021290	Watermelon (97103) v1	carwmB0483
Carg23893	Csa3G124960	Cucumber (Chinese Long) v2	carcuB0518
Carg23893	MELO3C006171	Melon (DHL92) v3.5.1	carmeB0494
Carg23893	ClCG05G002060	Watermelon (Charleston Gray)	carwcgB0472
Carg23893	CSPI03G09360	Wild cucumber (PI 183967)	carcpiB0525
Carg23893	Cucsa.257830	Cucumber (Gy14) v1	carcgyB0559
Carg23893	CmaCh06G011220	Cucurbita maxima (Rimu)	carcmaB0679
Carg23893	CmoCh06G011490	Cucurbita moschata (Rifu)	carcmoB0661
Carg23893	Lsi05G019820	Bottle gourd (USVL1VR-Ls)	carlsiB442
Carg23893	Cp4.1LG08g01800	Cucurbita pepo (Zucchini)	carcpeB0687
Carg23893	CsGy3G009460	Cucumber (Gy14) v2	carcgybB0495
Carg23893	MELO3C006171.2	Melon (DHL92) v3.6.1	carmedB0500
Carg23893	CsaV3_3G009500	Cucumber (Chinese Long) v3	carcucB0524
Carg23893	Cla97C05G082560	Watermelon (97103) v2	carwmbB0511
Carg23893	Bhi01G000205	Wax gourd	carwgoB0591

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23893	Silver-seed gourd	carcarB474
Carg23893	Silver-seed gourd	carcarB476
Carg23893	Cucumber (Gy14) v2	carcgybB0496
Carg23893	Cucumber (Gy14) v1	carcgyB0560
Carg23893	Cucurbita maxima (Rimu)	carcmaB0678
Carg23893	Cucurbita moschata (Rifu)	carcmoB0659
Carg23893	Cucurbita pepo (Zucchini)	carcpeB0684
Carg23893	Cucurbita pepo (Zucchini)	carcpeB0685
Carg23893	Wild cucumber (PI 183967)	carcpiB0526
Carg23893	Cucumber (Chinese Long) v2	carcuB0519
Carg23893	Cucumber (Chinese Long) v3	carcucB0525
Carg23893	Melon (DHL92) v3.5.1	carmeB0493
Carg23893	Melon (DHL92) v3.6.1	carmedB0499
Carg23893	Watermelon (Charleston Gray)	carwcgB0471
Carg23893	Watermelon (97103) v1	carwmB0484
Carg23893	Watermelon (97103) v2	carwmbB0510