ClCG04G007170 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACAAAATTAAGCTCAAGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCGGTGGCCAAGCCCACAGCTTTCCCAAGAAATAGGAAAAGGCTGATCACCGTCTTCTGGGTTTTCCGGCTGCCGAAATCCGCCAGATTCTCGCCGGAAAAGTTCCTTCGCCGCCTCGGCGCCAAAGTGGCTAAAGTTCTACGGTACGTGTCGTTGAGAAAGAGATCGTCGTCTTCGTCGTCCTCCAAAAATGGTTCAAACTTCAATAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCATAGAGCTGAAGCTGTAAAAGATTGTATCAAGTTCTTCAACTCTTCAAATTCTTCAGCTGTTTGA ATGTCAACAAAATTAAGCTCAAGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCGGTGGCCAAGCCCACAGCTTTCCCAAGAAATAGGAAAAGGCTGATCACCGTCTTCTGGGTTTTCCGGCTGCCGAAATCCGCCAGATTCTCGCCGGAAAAGTTCCTTCGCCGCCTCGGCGCCAAAGTGGCTAAAGTTCTACGGTACGTGTCGTTGAGAAAGAGATCGTCGTCTTCGTCGTCCTCCAAAAATGGTTCAAACTTCAATAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCATAGAGCTGAAGCTGTAAAAGATTGTATCAAGTTCTTCAACTCTTCAAATTCTTCAGCTGTTTGA ATGTCAACAAAATTAAGCTCAAGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCGGTGGCCAAGCCCACAGCTTTCCCAAGAAATAGGAAAAGGCTGATCACCGTCTTCTGGGTTTTCCGGCTGCCGAAATCCGCCAGATTCTCGCCGGAAAAGTTCCTTCGCCGCCTCGGCGCCAAAGTGGCTAAAGTTCTACGGTACGTGTCGTTGAGAAAGAGATCGTCGTCTTCGTCGTCCTCCAAAAATGGTTCAAACTTCAATAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCATAGAGCTGAAGCTGTAAAAGATTGTATCAAGTTCTTCAACTCTTCAAATTCTTCAGCTGTTTGA MSTKLSSSRRVSFSSDQAVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSSKNGSNFNRSHSVSDSMEESHRAEAVKDCIKFFNSSNSSAV
BLAST of ClCG04G007170 vs. TrEMBL
Match: A0A0A0L2K7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G308510 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 1.6e-41 Identity = 100/124 (80.65%), Postives = 107/124 (86.29%), Query Frame = 1
BLAST of ClCG04G007170 vs. TrEMBL
Match: A0A061EQH2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021741 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.9e-19 Identity = 57/120 (47.50%), Postives = 83/120 (69.17%), Query Frame = 1
BLAST of ClCG04G007170 vs. TrEMBL
Match: G7IPS2_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g013470 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.6e-17 Identity = 61/120 (50.83%), Postives = 75/120 (62.50%), Query Frame = 1
BLAST of ClCG04G007170 vs. TrEMBL
Match: V4S561_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013109mg PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.7e-17 Identity = 57/119 (47.90%), Postives = 79/119 (66.39%), Query Frame = 1
BLAST of ClCG04G007170 vs. TrEMBL
Match: A0A067EQR7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033106mg PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.7e-17 Identity = 57/119 (47.90%), Postives = 79/119 (66.39%), Query Frame = 1
BLAST of ClCG04G007170 vs. TAIR10
Match: AT3G09032.1 (AT3G09032.1 unknown protein) HSP 1 Score: 65.9 bits (159), Expect = 2.0e-11 Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 1
BLAST of ClCG04G007170 vs. TAIR10
Match: AT5G01225.1 (AT5G01225.1 unknown protein) HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10 Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 1
BLAST of ClCG04G007170 vs. TAIR10
Match: AT1G07300.1 (AT1G07300.1 josephin protein-related) HSP 1 Score: 59.7 bits (143), Expect = 1.4e-09 Identity = 36/101 (35.64%), Postives = 50/101 (49.50%), Query Frame = 1
BLAST of ClCG04G007170 vs. NCBI nr
Match: gi|659069318|ref|XP_008449204.1| (PREDICTED: josephin-like protein [Cucumis melo]) HSP 1 Score: 178.7 bits (452), Expect = 5.9e-42 Identity = 99/123 (80.49%), Postives = 107/123 (86.99%), Query Frame = 1
BLAST of ClCG04G007170 vs. NCBI nr
Match: gi|778693732|ref|XP_011653683.1| (PREDICTED: josephin-like protein [Cucumis sativus]) HSP 1 Score: 176.8 bits (447), Expect = 2.3e-41 Identity = 100/124 (80.65%), Postives = 107/124 (86.29%), Query Frame = 1
BLAST of ClCG04G007170 vs. NCBI nr
Match: gi|590628639|ref|XP_007026773.1| (Uncharacterized protein TCM_021741 [Theobroma cacao]) HSP 1 Score: 102.8 bits (255), Expect = 4.1e-19 Identity = 57/120 (47.50%), Postives = 83/120 (69.17%), Query Frame = 1
BLAST of ClCG04G007170 vs. NCBI nr
Match: gi|357446581|ref|XP_003593566.1| (hypothetical protein MTR_2g013470 [Medicago truncatula]) HSP 1 Score: 97.1 bits (240), Expect = 2.3e-17 Identity = 61/120 (50.83%), Postives = 75/120 (62.50%), Query Frame = 1
BLAST of ClCG04G007170 vs. NCBI nr
Match: gi|567873447|ref|XP_006429313.1| (hypothetical protein CICLE_v10013109mg [Citrus clementina]) HSP 1 Score: 96.3 bits (238), Expect = 3.9e-17 Identity = 57/119 (47.90%), Postives = 79/119 (66.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |