ClCG03G015140 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAGCTGATTGTCCTCTTCATGGTTGCCACGTCATCCATGGTCGGAGCATACGAGGTTCTTCTCGGCGCTTACTATGGACTTGCTGGCAACAACCTGCCACCACCATGGAAGGTGGTGCCAACTGTGTCGAAAATACAACATTCGTCGGGTTCGTTTGAATGAACCAAAGCTCGATGTTGTCGAAGCCTTTCCAGGCATGGGAATTGACCTCTCTTTTGGTGTGTCCAACAGCTTGATAACAAACATGGCCACCAATCACACCATACCTACATCGCACCCTTCATCCGCGATTTCACCATCAACTACATCATTATTGTTGGTCACGGAATCCCTTCAAAATCTCCTCAATGCTCGTTACCTCGGACAAGTGAAAACCACCACATTGGTTGGCTTATCCTCATTGGCAGTTAAAACCCCTCCATCTAGTGGCGCGTTTGACACCCCACCATTTCCAAGAACATGA ATGGCAAAGCTGATTGTCCTCTTCATGGTTGCCACGTCATCCATGGTCGGAGCATACGAGGTTCTTCTCGGCGCTTACTATGGACTTGCTGGCAACAACCTGCCACCACCATGGAAGGTGGTGCCAACTGTGTCGAAAATACAACATTCGTCGGGCATGGGAATTGACCTCTCTTTTGGTGTGTCCAACAGCTTGATAACAAACATGGCCACCAATCACACCATACCTACATCGCACCCTTCATCCGCGATTTCACCATCAACTACATCATTATTGTTGGTCACGGAATCCCTTCAAAATCTCCTCAATGCTCGTTACCTCGGACAAGTGAAAACCACCACATTGGTTGGCTTATCCTCATTGGCAGTTAAAACCCCTCCATCTAGTGGCGCGTTTGACACCCCACCATTTCCAAGAACATGA ATGGCAAAGCTGATTGTCCTCTTCATGGTTGCCACGTCATCCATGGTCGGAGCATACGAGGTTCTTCTCGGCGCTTACTATGGACTTGCTGGCAACAACCTGCCACCACCATGGAAGGTGGTGCCAACTGTGTCGAAAATACAACATTCGTCGGGCATGGGAATTGACCTCTCTTTTGGTGTGTCCAACAGCTTGATAACAAACATGGCCACCAATCACACCATACCTACATCGCACCCTTCATCCGCGATTTCACCATCAACTACATCATTATTGTTGGTCACGGAATCCCTTCAAAATCTCCTCAATGCTCGTTACCTCGGACAAGTGAAAACCACCACATTGGTTGGCTTATCCTCATTGGCAGTTAAAACCCCTCCATCTAGTGGCGCGTTTGACACCCCACCATTTCCAAGAACATGA MAKLIVLFMVATSSMVGAYEVLLGAYYGLAGNNLPPPWKVVPTVSKIQHSSGMGIDLSFGVSNSLITNMATNHTIPTSHPSSAISPSTTSLLLVTESLQNLLNARYLGQVKTTTLVGLSSLAVKTPPSSGAFDTPPFPRT
BLAST of ClCG03G015140 vs. TrEMBL
Match: A0A0A0LR03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416760 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.6e-21 Identity = 68/165 (41.21%), Postives = 88/165 (53.33%), Query Frame = 1
BLAST of ClCG03G015140 vs. TrEMBL
Match: A0A0A0LZ10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G595900 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 6.2e-21 Identity = 69/173 (39.88%), Postives = 96/173 (55.49%), Query Frame = 1
BLAST of ClCG03G015140 vs. TrEMBL
Match: A0A0A0LWM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G595910 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-10 Identity = 44/101 (43.56%), Postives = 57/101 (56.44%), Query Frame = 1
BLAST of ClCG03G015140 vs. TrEMBL
Match: A0A0Q3JGG3_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_2g60497 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.5e-06 Identity = 48/170 (28.24%), Postives = 77/170 (45.29%), Query Frame = 1
BLAST of ClCG03G015140 vs. TrEMBL
Match: I1HV43_BRADI (Uncharacterized protein OS=Brachypodium distachyon PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.5e-06 Identity = 48/170 (28.24%), Postives = 77/170 (45.29%), Query Frame = 1
BLAST of ClCG03G015140 vs. NCBI nr
Match: gi|659100571|ref|XP_008451158.1| (PREDICTED: uncharacterized protein LOC103492536 [Cucumis melo]) HSP 1 Score: 133.7 bits (335), Expect = 2.6e-28 Identity = 83/169 (49.11%), Postives = 99/169 (58.58%), Query Frame = 1
BLAST of ClCG03G015140 vs. NCBI nr
Match: gi|659100571|ref|XP_008451158.1| (PREDICTED: uncharacterized protein LOC103492536 [Cucumis melo]) HSP 1 Score: 115.5 bits (288), Expect = 7.3e-23 Identity = 73/160 (45.62%), Postives = 87/160 (54.37%), Query Frame = 1
HSP 2 Score: 111.3 bits (277), Expect = 1.4e-21 Identity = 74/174 (42.53%), Postives = 97/174 (55.75%), Query Frame = 1
BLAST of ClCG03G015140 vs. NCBI nr
Match: gi|778674443|ref|XP_004153772.2| (PREDICTED: lichenase-2-like [Cucumis sativus]) HSP 1 Score: 109.4 bits (272), Expect = 5.2e-21 Identity = 68/165 (41.21%), Postives = 88/165 (53.33%), Query Frame = 1
BLAST of ClCG03G015140 vs. NCBI nr
Match: gi|778665329|ref|XP_004144124.2| (PREDICTED: putative glucan endo-1,3-beta-glucosidase GVI [Cucumis sativus]) HSP 1 Score: 108.6 bits (270), Expect = 8.9e-21 Identity = 69/173 (39.88%), Postives = 96/173 (55.49%), Query Frame = 1
BLAST of ClCG03G015140 vs. NCBI nr
Match: gi|778665333|ref|XP_004144115.2| (PREDICTED: lichenase-2-like [Cucumis sativus]) HSP 1 Score: 74.3 bits (181), Expect = 1.9e-10 Identity = 44/101 (43.56%), Postives = 57/101 (56.44%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |