ClCG03G012120 (gene) Watermelon (Charleston Gray)

Overview
NameClCG03G012120
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionAminoacylase like protein
LocationCG_Chr03 : 24288372 .. 24288720 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTCTATCCCTATCGAGGCTTCTAAGTGGCTTTATCCTCCATTCATAGCCAACCAGACCTCCAATGGCAGAACCTTTGCTCATGGTTCTCAAGATGACTTGTGCATGTTCGTACGATTTGGGGGTATCTTGAAGCCACCTGGCACCTCAGAAATCGAAATTTTGTCCATGTTCGTACGATTCACATCTTGTATGTACCGAATGAGGAGATTGTGGATTTCTTATGGCTAGAGGAAAAAGGAAATTGAAATTAACGGCAATACTGACAGACATCGATGACAGCAGCGGCGGAAAACGACGGCAACACCGAGACTTCACGACGACGTTGAGGATGGAGGTCAGTTAA

mRNA sequence

ATGGACTCTATCCCTATCGAGGCTTCTAAGTGGCTTTATCCTCCATTCATAGCCAACCAGACCTCCAATGGCAGAACCTTTGCTCATGGTTCTCAAGATGACTTGTGCATGTTCGTACGATTTGGGGGTATCTTGAAGCCACCTGGCACCTCAGAAATCGAAATTTTGTCCATGTTCGTACGATTCACATCTTACATCGATGACAGCAGCGGCGGAAAACGACGGCAACACCGAGACTTCACGACGACGTTGAGGATGGAGGTCAGTTAA

Coding sequence (CDS)

ATGGACTCTATCCCTATCGAGGCTTCTAAGTGGCTTTATCCTCCATTCATAGCCAACCAGACCTCCAATGGCAGAACCTTTGCTCATGGTTCTCAAGATGACTTGTGCATGTTCGTACGATTTGGGGGTATCTTGAAGCCACCTGGCACCTCAGAAATCGAAATTTTGTCCATGTTCGTACGATTCACATCTTACATCGATGACAGCAGCGGCGGAAAACGACGGCAACACCGAGACTTCACGACGACGTTGAGGATGGAGGTCAGTTAA

Protein sequence

MDSIPIEASKWLYPPFIANQTSNGRTFAHGSQDDLCMFVRFGGILKPPGTSEIEILSMFVRFTSYIDDSSGGKRRQHRDFTTTLRMEVS
Homology
[Close]
BLAST of ClCG03G012120 vs. TrEMBL
Match: A0A0S3RNQ6_PHAAN (Aminoacylase-1 OS=Vigna angularis var. angularis GN=Vigan.03G200700 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.7e-06
Identity = 23/41 (56.10%), Postives = 34/41 (82.93%), Query Frame = 1 

Query: 1   MDSIPIEASKWLYPPFIANQTSNGRTFAHGSQDDLCMFVRF 42
           +DS+P E SKWL+PPF A++TS+G+ FA G+QDD C+ V++
Sbjct: 115 LDSVPAEPSKWLHPPFSAHRTSDGKIFARGAQDDKCIAVQY 155

[Close]
BLAST of ClCG03G012120 vs. TrEMBL
Match: A0A0L9V056_PHAAN (Aminoacylase-1 OS=Phaseolus angularis GN=LR48_Vigan07g216900 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.7e-06
Identity = 23/41 (56.10%), Postives = 34/41 (82.93%), Query Frame = 1 

Query: 1   MDSIPIEASKWLYPPFIANQTSNGRTFAHGSQDDLCMFVRF 42
           +DS+P E SKWL+PPF A++TS+G+ FA G+QDD C+ V++
Sbjct: 113 LDSVPAEPSKWLHPPFSAHRTSDGKIFARGAQDDKCIAVQY 153

[Close]
BLAST of ClCG03G012120 vs. TrEMBL
Match: A0A0A0LRI1_CUCSA (Aminoacylase-1 OS=Cucumis sativus GN=Csa_1G005600 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 8.0e-06
Identity = 23/41 (56.10%), Postives = 33/41 (80.49%), Query Frame = 1 

Query: 1   MDSIPIEASKWLYPPFIANQTSNGRTFAHGSQDDLCMFVRF 42
           MDS+P E SKW++PPF A +TS+G+ FA GSQDD C+ +++
Sbjct: 112 MDSVPAEPSKWVHPPFSAVRTSDGKIFARGSQDDKCIAIQY 152

[Close]
BLAST of ClCG03G012120 vs. TAIR10
Match: AT1G44820.1 (AT1G44820.1 Peptidase M20/M25/M40 family protein)

HSP 1 Score: 53.1 bits (126), Expect = 9.9e-08
Identity = 20/41 (48.78%), Postives = 29/41 (70.73%), Query Frame = 1 

Query: 1   MDSIPIEASKWLYPPFIANQTSNGRTFAHGSQDDLCMFVRF 42
           +DS+P E+ KW YPPF A++T +G  +A G+QDD C+ V++
Sbjct: 98  LDSVPAESEKWTYPPFSAHKTIDGHIYARGAQDDKCIGVQY 138

[Close]
BLAST of ClCG03G012120 vs. TAIR10
Match: AT1G44180.1 (AT1G44180.1 Peptidase M20/M25/M40 family protein)

HSP 1 Score: 52.4 bits (124), Expect = 1.7e-07
Identity = 19/41 (46.34%), Postives = 30/41 (73.17%), Query Frame = 1 

Query: 1   MDSIPIEASKWLYPPFIANQTSNGRTFAHGSQDDLCMFVRF 42
           +DS+P E+ KW++PPF A++T +G  +A G+QDD C+ V++
Sbjct: 100 LDSVPAESEKWIHPPFSAHRTIDGHIYARGAQDDKCIGVQY 140

[Close]
BLAST of ClCG03G012120 vs. NCBI nr
Match: gi|965666575|dbj|BAT82063.1| (hypothetical protein VIGAN_03200700 [Vigna angularis var. angularis])

HSP 1 Score: 58.5 bits (140), Expect = 6.7e-06
Identity = 23/41 (56.10%), Postives = 34/41 (82.93%), Query Frame = 1 

Query: 1   MDSIPIEASKWLYPPFIANQTSNGRTFAHGSQDDLCMFVRF 42
           +DS+P E SKWL+PPF A++TS+G+ FA G+QDD C+ V++
Sbjct: 115 LDSVPAEPSKWLHPPFSAHRTSDGKIFARGAQDDKCIAVQY 155

[Close]
BLAST of ClCG03G012120 vs. NCBI nr
Match: gi|920705240|gb|KOM48465.1| (hypothetical protein LR48_Vigan07g216900 [Vigna angularis])

HSP 1 Score: 58.5 bits (140), Expect = 6.7e-06
Identity = 23/41 (56.10%), Postives = 34/41 (82.93%), Query Frame = 1 

Query: 1   MDSIPIEASKWLYPPFIANQTSNGRTFAHGSQDDLCMFVRF 42
           +DS+P E SKWL+PPF A++TS+G+ FA G+QDD C+ V++
Sbjct: 113 LDSVPAEPSKWLHPPFSAHRTSDGKIFARGAQDDKCIAVQY 153

The following BLAST results are available for this feature:
BLAST of ClCG03G012120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0S3RNQ6_PHAAN4.7e-0656.10Aminoacylase-1 OS=Vigna angularis var. angularis GN=Vigan.03G200700 PE=3 SV=1[more]
A0A0L9V056_PHAAN4.7e-0656.10Aminoacylase-1 OS=Phaseolus angularis GN=LR48_Vigan07g216900 PE=3 SV=1[more]
A0A0A0LRI1_CUCSA8.0e-0656.10Aminoacylase-1 OS=Cucumis sativus GN=Csa_1G005600 PE=3 SV=1[more]
BLAST of ClCG03G012120 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G44820.19.9e-0848.78 Peptidase M20/M25/M40 family protein[more]
AT1G44180.11.7e-0746.34 Peptidase M20/M25/M40 family protein[more]
BLAST of ClCG03G012120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|965666575|dbj|BAT82063.1|6.7e-0656.10hypothetical protein VIGAN_03200700 [Vigna angularis var. angularis][more]
gi|920705240|gb|KOM48465.1|6.7e-0656.10hypothetical protein LR48_Vigan07g216900 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006520 cellular amino acid metabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004046 aminoacylase activity
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G012120.1ClCG03G012120.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.630.10coord: 1..38
score: 6.

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG03G012120Cucumber (Gy14) v1cgywcgB606
ClCG03G012120Cucumber (Gy14) v1cgywcgB607
ClCG03G012120Cucurbita maxima (Rimu)cmawcgB054
ClCG03G012120Cucurbita maxima (Rimu)cmawcgB062
ClCG03G012120Cucurbita maxima (Rimu)cmawcgB112
ClCG03G012120Cucurbita maxima (Rimu)cmawcgB113
ClCG03G012120Cucurbita moschata (Rifu)cmowcgB045
ClCG03G012120Cucurbita moschata (Rifu)cmowcgB054
ClCG03G012120Cucurbita moschata (Rifu)cmowcgB099
ClCG03G012120Cucurbita moschata (Rifu)cmowcgB101
ClCG03G012120Wild cucumber (PI 183967)cpiwcgB046
ClCG03G012120Wild cucumber (PI 183967)cpiwcgB049
ClCG03G012120Cucumber (Chinese Long) v2cuwcgB043
ClCG03G012120Cucumber (Chinese Long) v2cuwcgB046
ClCG03G012120Melon (DHL92) v3.5.1mewcgB245
ClCG03G012120Melon (DHL92) v3.5.1mewcgB241
ClCG03G012120Watermelon (97103) v1wcgwmB226
ClCG03G012120Cucurbita pepo (Zucchini)cpewcgB014
ClCG03G012120Cucurbita pepo (Zucchini)cpewcgB324
ClCG03G012120Cucurbita pepo (Zucchini)cpewcgB327
ClCG03G012120Cucurbita pepo (Zucchini)cpewcgB606
ClCG03G012120Bottle gourd (USVL1VR-Ls)lsiwcgB364
ClCG03G012120Cucumber (Gy14) v2cgybwcgB041
ClCG03G012120Cucumber (Gy14) v2cgybwcgB043
ClCG03G012120Melon (DHL92) v3.6.1medwcgB232
ClCG03G012120Silver-seed gourdcarwcgB0520
ClCG03G012120Silver-seed gourdcarwcgB0944
ClCG03G012120Silver-seed gourdcarwcgB0946
ClCG03G012120Cucumber (Chinese Long) v3cucwcgB046
ClCG03G012120Cucumber (Chinese Long) v3cucwcgB050
ClCG03G012120Watermelon (97103) v2wcgwmbB186
ClCG03G012120Wax gourdwcgwgoB362
ClCG03G012120Wax gourdwcgwgoB370