ClCG03G010280 (gene) Watermelon (Charleston Gray)

NameClCG03G010280
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr03 : 18418879 .. 18419339 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTGAAAATTTACTGCAAATTACGTTAAGCACGTTATTGATGTTTTACACAATTCACATATATTTTGTATTGATCGTTTCAAGATCAGAAGTTCAATTTTTTACTATACATATAAAAAATTTTCTTGTTTCTTAATTCTATAAAAAAATAATAATTAAACCTCACAAGGAATGTACTTTATTTATTTTTAGAGAACACATATATTTTTTTGTGAACTTTACTTCTCTATGAATTTTTTTTTCTTATAAATATTTGTAGATGGCAATCAACGTGTTTGGAAAGCCAATTACAAATAACACTCTAAAAGTAATGCCTGAATATCACAGAAAGACAATAACACGTCGAGATAGAGCACATGTGGCACTTAACAGGAAGAATGTTGAAGATAAATACAAAAAGGCTAAAACTAAAACAACAATGGGGAATTGGAGTTTCTACCATTTGCTTAATATATAA

mRNA sequence

ATGAAGATGGCAATCAACGTGTTTGGAAAGCCAATTACAAATAACACTCTAAAAGTAATGCCTGAATATCACAGAAAGACAATAACACGTCGAGATAGAGCACATGTGGCACTTAACAGGAAGAATGTTGAAGATAAATACAAAAAGGCTAAAACTAAAACAACAATGGGGAATTGGAGTTTCTACCATTTGCTTAATATATAA

Coding sequence (CDS)

ATGAAGATGGCAATCAACGTGTTTGGAAAGCCAATTACAAATAACACTCTAAAAGTAATGCCTGAATATCACAGAAAGACAATAACACGTCGAGATAGAGCACATGTGGCACTTAACAGGAAGAATGTTGAAGATAAATACAAAAAGGCTAAAACTAAAACAACAATGGGGAATTGGAGTTTCTACCATTTGCTTAATATATAA

Protein sequence

MKMAINVFGKPITNNTLKVMPEYHRKTITRRDRAHVALNRKNVEDKYKKAKTKTTMGNWSFYHLLNI
BLAST of ClCG03G010280 vs. TrEMBL
Match: A0A097BU21_CITLA (23 kDa jasmonate-induced protein OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.0e-10
Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 1

Query: 3  MAINVFGKPITNNTLKVMPEYHRKTITRRDRAHVALNRKNVEDKYKKAK 52
          MA NVFG PITN TL  MP+Y  K ITRRDRAHVALN KN +DK K A+
Sbjct: 1  MAYNVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAR 49

BLAST of ClCG03G010280 vs. TrEMBL
Match: A0A0A0M0F4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G642550 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-08
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 1

Query: 3  MAINVFGKPITNNTLKVMPEYHRKTITRRDRAHVALNRKNVEDKYKKAK 52
          MA NVFG PITN+TL+ MP+Y  K ITRRDRA+VALN KN + K K A+
Sbjct: 1  MADNVFGNPITNSTLQAMPDYEGKVITRRDRAYVALNMKNAQGKDKDAQ 49

BLAST of ClCG03G010280 vs. TrEMBL
Match: A0A0D3HL17_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.2e-07
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1

Query: 3  MAINVFGKPITNNTLKVMPEYHRKTITRRDRAHVALNRKNVEDKYKKAK 52
          MA NVFG PIT+ TLK +PEYH K I+++DRA+VA++ KN E K   A+
Sbjct: 1  MASNVFGTPITDETLKALPEYHNKQISQKDRAYVAMDMKNAEGKDVNAR 49

BLAST of ClCG03G010280 vs. TrEMBL
Match: M5X699_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020548mg PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.2e-07
Identity = 33/50 (66.00%), Postives = 34/50 (68.00%), Query Frame = 1

Query: 3  MAINVFGKPITNNTLKVMPEYHRKTITRRDRAHVALNRKNVEDKYKKAKT 53
          MA NVFG PI N+TLK MPEY  K I R DRA VAL  KNV DK  KA T
Sbjct: 1  MAYNVFGNPIQNSTLKGMPEYKLKAIERNDRAKVALQMKNVGDKDLKALT 50

BLAST of ClCG03G010280 vs. NCBI nr
Match: gi|694188379|gb|AIS71930.1| (23 kDa jasmonate-induced protein [Citrullus lanatus])

HSP 1 Score: 71.6 bits (174), Expect = 5.8e-10
Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 1

Query: 3  MAINVFGKPITNNTLKVMPEYHRKTITRRDRAHVALNRKNVEDKYKKAK 52
          MA NVFG PITN TL  MP+Y  K ITRRDRAHVALN KN +DK K A+
Sbjct: 1  MAYNVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAR 49

BLAST of ClCG03G010280 vs. NCBI nr
Match: gi|659086035|ref|XP_008443732.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo])

HSP 1 Score: 68.6 bits (166), Expect = 4.9e-09
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 1

Query: 3  MAINVFGKPITNNTLKVMPEYHRKTITRRDRAHVALNRKNVEDKYKKAK 52
          MA NVFG PITN+TL+ MPEY  KTITRRDRA+VA N KN ++K + A+
Sbjct: 1  MADNVFGNPITNSTLQAMPEYEGKTITRRDRAYVAFNMKNAQNKDRSAR 49

BLAST of ClCG03G010280 vs. NCBI nr
Match: gi|700211516|gb|KGN66612.1| (hypothetical protein Csa_1G642550 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-08
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 1

Query: 3  MAINVFGKPITNNTLKVMPEYHRKTITRRDRAHVALNRKNVEDKYKKAK 52
          MA NVFG PITN+TL+ MP+Y  K ITRRDRA+VALN KN + K K A+
Sbjct: 1  MADNVFGNPITNSTLQAMPDYEGKVITRRDRAYVALNMKNAQGKDKDAQ 49

BLAST of ClCG03G010280 vs. NCBI nr
Match: gi|645280798|ref|XP_008245340.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Prunus mume])

HSP 1 Score: 61.6 bits (148), Expect = 6.0e-07
Identity = 33/50 (66.00%), Postives = 34/50 (68.00%), Query Frame = 1

Query: 3  MAINVFGKPITNNTLKVMPEYHRKTITRRDRAHVALNRKNVEDKYKKAKT 53
          MA NVFG PI N+TLK MPEY  K I R DRA VAL  KNV DK  KA T
Sbjct: 1  MAYNVFGNPIENSTLKGMPEYKLKAIERNDRAKVALQMKNVGDKDLKALT 50

BLAST of ClCG03G010280 vs. NCBI nr
Match: gi|596048469|ref|XP_007220383.1| (hypothetical protein PRUPE_ppa020548mg [Prunus persica])

HSP 1 Score: 61.6 bits (148), Expect = 6.0e-07
Identity = 33/50 (66.00%), Postives = 34/50 (68.00%), Query Frame = 1

Query: 3  MAINVFGKPITNNTLKVMPEYHRKTITRRDRAHVALNRKNVEDKYKKAKT 53
          MA NVFG PI N+TLK MPEY  K I R DRA VAL  KNV DK  KA T
Sbjct: 1  MAYNVFGNPIQNSTLKGMPEYKLKAIERNDRAKVALQMKNVGDKDLKALT 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A097BU21_CITLA4.0e-1069.3923 kDa jasmonate-induced protein OS=Citrullus lanatus PE=2 SV=1[more]
A0A0A0M0F4_CUCSA1.3e-0865.31Uncharacterized protein OS=Cucumis sativus GN=Csa_1G642550 PE=4 SV=1[more]
A0A0D3HL17_9ORYZ4.2e-0757.14Uncharacterized protein OS=Oryza barthii PE=4 SV=1[more]
M5X699_PRUPE4.2e-0766.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020548mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|694188379|gb|AIS71930.1|5.8e-1069.3923 kDa jasmonate-induced protein [Citrullus lanatus][more]
gi|659086035|ref|XP_008443732.1|4.9e-0965.31PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo][more]
gi|700211516|gb|KGN66612.1|1.9e-0865.31hypothetical protein Csa_1G642550 [Cucumis sativus][more]
gi|645280798|ref|XP_008245340.1|6.0e-0766.00PREDICTED: 23 kDa jasmonate-induced protein-like [Prunus mume][more]
gi|596048469|ref|XP_007220383.1|6.0e-0766.00hypothetical protein PRUPE_ppa020548mg [Prunus persica][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G010280.1ClCG03G010280.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG03G010280Bhi02G001133Wax gourdwcgwgoB369
The following gene(s) are paralogous to this gene:

None