Bhi02G001133 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02G001133
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Jasmonate-induced protein
Location	chr2 : 34130671 .. 34131191 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACAGTGTGTTTGGTAGTCCGATTACGGATGAAATTCTAAAAGTCATGCATGAATATCAAGGAAAGACAATAATACGTCGAGATAGAGCACATGTGGCACTCAACATGAAGAATGCTCAAGAAAAAGACAAAAATGCTCGAGAATATGTACCATGGTTGAAGGAACAATGGGGAGATGGAGTTTCTACTCTTTGCTTAATTTACAATGCTACTGGTGATACTATAAAATTTGTTTGTGAACACAGTTGATTTGGTGATATTGGGCCTGGTCCTTACCCAATCGATATTGCAAATGGTCAGTGGGGTGGGTTTCTTCATGTCAAAAACTTTGGACTCACAAGATCTTGTGGTGCTGTCGTATATCGTGGTTTAAATGATGATGGTGTGCATTGTGATTGGATGGCAGCACGGTCCAATTCCATCTTTCGTGCATTTGCAAACAATGCAGTTAGTCAACTTTTTTTTCAACCCTTCTTTTTTTTTTTTTTTTTCATTTGATTTTAGTACCTAAGCTTCTAA

mRNA sequence

TAAACAGTGTGTTTGGTAGTCCGATTACGGATGAAATTCTAAAAGTCATGCATGAATATCAAGGAAAGACAATAATACGTCGAGATAGAGCACATGTGGCACTCAACATGAAGAATGCTCAAGAAAAAGACAAAAATGCTCGAGAATATGTACCATGGTTGAAGGAACAATGGGGAGATGGAGTTTCTACTCTTTGCTTAATTTACAATGCTACTGTTGATTTGGTGATATTGGGCCTGGTCCTTACCCAATCGATATTGCAAATGGTCAGTGGGGTGGGTTTCTTCATGTCAAAAACTTTGGACTCACAAGATCTTGTGGTGCTGTCGTATATCGTGTACCTAAGCTTCTAA

Coding sequence (CDS)

TAAACAGTGTGTTTGGTAGTCCGATTACGGATGAAATTCTAAAAGTCATGCATGAATATCAAGGAAAGACAATAATACGTCGAGATAGAGCACATGTGGCACTCAACATGAAGAATGCTCAAGAAAAAGACAAAAATGCTCGAGAATATGTACCATGGTTGAAGGAACAATGGGGAGATGGAGTTTCTACTCTTTGCTTAATTTACAATGCTACTGTTGATTTGGTGATATTGGGCCTGGTCCTTACCCAATCGATATTGCAAATGGTCAGTGGGGTGGGTTTCTTCATGTCAAAAACTTTGGACTCACAAGATCTTGTGGTGCTGTCGTATATCGTGTACCTAAGCTTCTAA

Protein sequence

NSVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDGVSTLCLIYNATVDLVILGLVLTQSILQMVSGVGFFMSKTLDSQDLVVLSYIVYLSF

Homology

[Close]

BLAST of Bhi02G001133 vs. Swiss-Prot
Match: sp|P32024|JI23_HORVU (23 kDa jasmonate-induced protein OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-08
Identity = 30/71 (42.25%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 1  NSVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDG 60
          + VFG+PI+ + +    EY+ + I ++D A  A+ M NA  KD NA+++V  LKE++G+G
Sbjct: 3  SGVFGTPISAQTVIATGEYK-EPITQKDVADYAMKMINAGGKDVNAQKFVDNLKERYGNG 62

Query: 61 VSTLCLIYNAT 72
          ++  CL+YNAT
Sbjct: 63 IAVKCLLYNAT 72

[Close]

BLAST of Bhi02G001133 vs. TrEMBL
Match: tr|A0A097BU21|A0A097BU21_CITLA (23 kDa jasmonate-induced protein OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.9e-23
Identity = 55/74 (74.32%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 2  SVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDGV 61
          +VFG+PIT+E L  M +Y+GK I RRDRAHVALNMKNAQ+KDKNAREYV  LK+QWG GV
Sbjct: 4  NVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWGTGV 63

Query: 62 STLCLIYNATVDLV 76
          STLCLIYNAT D +
Sbjct: 64 STLCLIYNATGDTI 77

[Close]

BLAST of Bhi02G001133 vs. TrEMBL
Match: tr|A0A1S3B9I3|A0A1S3B9I3_CUCME (23 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103487248 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.0e-20
Identity = 48/75 (64.00%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 1  NSVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDG 60
          ++VFG+PIT+  L+ M EY+GKTI RRDRA+VA NMKNAQ KD++AR++V  L+E+WG G
Sbjct: 3  DNVFGNPITNSTLQAMPEYEGKTITRRDRAYVAFNMKNAQNKDRSARDHVEKLREEWGHG 62

Query: 61 VSTLCLIYNATVDLV 76
          V+TLCLIYNAT D +
Sbjct: 63 VATLCLIYNATGDTI 77

[Close]

BLAST of Bhi02G001133 vs. TrEMBL
Match: tr|A0A0A0M0F4|A0A0A0M0F4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G642550 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-19
Identity = 48/75 (64.00%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 1  NSVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDG 60
          ++VFG+PIT+  L+ M +Y+GK I RRDRA+VALNMKNAQ KDK+A++YV  L+E+WG G
Sbjct: 3  DNVFGNPITNSTLQAMPDYEGKVITRRDRAYVALNMKNAQGKDKDAQDYVEKLREEWGSG 62

Query: 61 VSTLCLIYNATVDLV 76
          V+TLCLIYNAT D +
Sbjct: 63 VATLCLIYNATGDTI 77

[Close]

BLAST of Bhi02G001133 vs. TrEMBL
Match: tr|A0A1Q3BEY1|A0A1Q3BEY1_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_09902 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.9e-19
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 2  SVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDGV 61
          +VFG+P+TDE LK M EY GK I R+DRAHVALNMKNAQ+K  NA++YV  L  Q+G G+
Sbjct: 4  NVFGNPVTDETLKAMSEYDGKQITRKDRAHVALNMKNAQDKAVNAQQYVENLSGQYGSGI 63

Query: 62 STLCLIYNATVDLVIL 78
           TLC+IYNAT D++ L
Sbjct: 64 CTLCMIYNATGDMIEL 79

[Close]

BLAST of Bhi02G001133 vs. TrEMBL
Match: tr|A0A1Q3DGE5|A0A1Q3DGE5_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34948 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.8e-18
Identity = 47/76 (61.84%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 2  SVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDGV 61
          +VFG+PIT+E LK M EY+ KTI R DRAHVALNMKNAQ KD +A+ YV  L +++G G+
Sbjct: 4  NVFGTPITNETLKSMAEYENKTITRTDRAHVALNMKNAQGKDADAQTYVENLDKEYGSGI 63

Query: 62 STLCLIYNATVDLVIL 78
          +TLCL+YNAT D++ L
Sbjct: 64 TTLCLVYNATGDMIQL 79

[Close]

BLAST of Bhi02G001133 vs. NCBI nr
Match: AIS71930.1 (23 kDa jasmonate-induced protein [Citrullus lanatus])

HSP 1 Score: 115.9 bits (289), Expect = 9.0e-23
Identity = 55/74 (74.32%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 2  SVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDGV 61
          +VFG+PIT+E L  M +Y+GK I RRDRAHVALNMKNAQ+KDKNAREYV  LK+QWG GV
Sbjct: 4  NVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWGTGV 63

Query: 62 STLCLIYNATVDLV 76
          STLCLIYNAT D +
Sbjct: 64 STLCLIYNATGDTI 77

[Close]

BLAST of Bhi02G001133 vs. NCBI nr
Match: XP_008376321.1 (PREDICTED: 23 kDa jasmonate-induced protein-like [Malus domestica])

HSP 1 Score: 106.3 bits (264), Expect = 7.1e-20
Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 2  SVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDGV 61
          +VFG+PITDE LK M EY  K I R DRAHVALNMKNA EKD NAR YV  LKEQ+GDGV
Sbjct: 4  NVFGNPITDETLKGMPEYADKQIERLDRAHVALNMKNAXEKDFNARTYVEKLKEQYGDGV 63

Query: 62 STLCLIYNATVDLV 76
          STLCL+YNAT D +
Sbjct: 64 STLCLVYNATGDTI 77

[Close]

BLAST of Bhi02G001133 vs. NCBI nr
Match: XP_008348390.1 (PREDICTED: 23 kDa jasmonate-induced protein-like [Malus domestica])

HSP 1 Score: 106.3 bits (264), Expect = 7.1e-20
Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 2  SVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDGV 61
          +VFG+PITDE LK M EY  K I R DRAHVALNMKNA EKD NAR YV  LKEQ+GDGV
Sbjct: 4  NVFGNPITDETLKGMPEYADKQIERLDRAHVALNMKNAXEKDFNARTYVEKLKEQYGDGV 63

Query: 62 STLCLIYNATVDLV 76
          STLCL+YNAT D +
Sbjct: 64 STLCLVYNATGDTI 77

[Close]

BLAST of Bhi02G001133 vs. NCBI nr
Match: XP_008443732.1 (PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo])

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19
Identity = 48/75 (64.00%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 1  NSVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDG 60
          ++VFG+PIT+  L+ M EY+GKTI RRDRA+VA NMKNAQ KD++AR++V  L+E+WG G
Sbjct: 3  DNVFGNPITNSTLQAMPEYEGKTITRRDRAYVAFNMKNAQNKDRSARDHVEKLREEWGHG 62

Query: 61 VSTLCLIYNATVDLV 76
          V+TLCLIYNAT D +
Sbjct: 63 VATLCLIYNATGDTI 77

[Close]

BLAST of Bhi02G001133 vs. NCBI nr
Match: KGN66612.1 (hypothetical protein Csa_1G642550 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-19
Identity = 48/75 (64.00%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 1  NSVFGSPITDEILKVMHEYQGKTIIRRDRAHVALNMKNAQEKDKNAREYVPWLKEQWGDG 60
          ++VFG+PIT+  L+ M +Y+GK I RRDRA+VALNMKNAQ KDK+A++YV  L+E+WG G
Sbjct: 3  DNVFGNPITNSTLQAMPDYEGKVITRRDRAYVALNMKNAQGKDKDAQDYVEKLREEWGSG 62

Query: 61 VSTLCLIYNATVDLV 76
          V+TLCLIYNAT D +
Sbjct: 63 VATLCLIYNATGDTI 77

The following BLAST results are available for this feature:

BLAST of Bhi02G001133 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P32024\|JI23_HORVU	2.5e-08	42.25	23 kDa jasmonate-induced protein OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]

BLAST of Bhi02G001133 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi02G001133 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A097BU21\|A0A097BU21_CITLA	5.9e-23	74.32	23 kDa jasmonate-induced protein OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
tr\|A0A1S3B9I3\|A0A1S3B9I3_CUCME	8.0e-20	64.00	23 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103487248 PE...	[more]
tr\|A0A0A0M0F4\|A0A0A0M0F4_CUCSA	1.0e-19	64.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G642550 PE=4 SV=1	[more]
tr\|A0A1Q3BEY1\|A0A1Q3BEY1_CEPFO	8.9e-19	63.16	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_09902 PE=4...	[more]
tr\|A0A1Q3DGE5\|A0A1Q3DGE5_CEPFO	9.8e-18	61.84	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34948 PE=4...	[more]

BLAST of Bhi02G001133 vs. NCBI nr


Match Name	E-value	Identity	Description
AIS71930.1	9.0e-23	74.32	23 kDa jasmonate-induced protein [Citrullus lanatus]	[more]
XP_008376321.1	7.1e-20	72.97	PREDICTED: 23 kDa jasmonate-induced protein-like [Malus domestica]	[more]
XP_008348390.1	7.1e-20	72.97	PREDICTED: 23 kDa jasmonate-induced protein-like [Malus domestica]	[more]
XP_008443732.1	1.2e-19	64.00	PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo]	[more]
KGN66612.1	1.6e-19	64.00	hypothetical protein Csa_1G642550 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001133	Bhi02M001133	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36482	FAMILY NOT NAMED	coord: 2..72

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi02G001133	ClCG03G010280	Watermelon (Charleston Gray)	wcgwgoB369
Bhi02G001133	Cucsa.356110	Cucumber (Gy14) v1	cgywgoB711

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi02G001133	Cucumber (Gy14) v1	cgywgoB708
Bhi02G001133	Cucumber (Gy14) v1	cgywgoB709
Bhi02G001133	Cucumber (Gy14) v2	cgybwgoB086
Bhi02G001133	Cucurbita maxima (Rimu)	cmawgoB0078
Bhi02G001133	Cucurbita maxima (Rimu)	cmawgoB0161
Bhi02G001133	Cucurbita moschata (Rifu)	cmowgoB0072
Bhi02G001133	Cucurbita moschata (Rifu)	cmowgoB0158
Bhi02G001133	Cucurbita moschata (Rifu)	cmowgoB0159
Bhi02G001133	Cucurbita pepo (Zucchini)	cpewgoB0018
Bhi02G001133	Cucurbita pepo (Zucchini)	cpewgoB0468
Bhi02G001133	Wild cucumber (PI 183967)	cpiwgoB091
Bhi02G001133	Wild cucumber (PI 183967)	cpiwgoB092
Bhi02G001133	Cucumber (Chinese Long) v3	cucwgoB097
Bhi02G001133	Cucumber (Chinese Long) v3	cucwgoB098
Bhi02G001133	Cucumber (Chinese Long) v2	cuwgoB089
Bhi02G001133	Cucumber (Chinese Long) v2	cuwgoB090
Bhi02G001133	Bottle gourd (USVL1VR-Ls)	lsiwgoB511
Bhi02G001133	Bottle gourd (USVL1VR-Ls)	lsiwgoB521
Bhi02G001133	Melon (DHL92) v3.6.1	medwgoB299
Bhi02G001133	Melon (DHL92) v3.5.1	mewgoB299
Bhi02G001133	Melon (DHL92) v3.5.1	mewgoB300
Bhi02G001133	Watermelon (97103) v1	wgowmB655
Bhi02G001133	Silver-seed gourd	carwgoB1135