ClCG03G000820 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G000820
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	60S acidic ribosomal protein p0
Location	CG_Chr03 : 838164 .. 840427 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTCAAACCCACCAGAGCTCAAAAGAAGACTCACTACGACCAGAAACTCTGCCGCCTTCTCGAAGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGCTCTAACCAGCTTCAGAGCATTCGCAAGGGCCTTCGTGGCGATTCCATTGTCCTCATGGGCAAGAACACCATGATGAAACGTTCCATCAGAATCCATTCTGAGAAGACCGGTAACACCGCCACCATGAACCTCCTCCCTCATCTTGTGGTACGGACTCCCCCCCCTCTCCCTTTAACTCCATTTTGGTTTTTGTGGTCTCTTGTTAATCTCAACGAGATTTCTTCGATCCATAGGGAAACGTCGGCTTGATCTTCACTAAAGGTGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTATATATATATATATTGTGTTTTTGGGTTTGTACTTTGTGCTATGATATCCATGTATATTGCCTGAGGCTTGTTTGGTAATTTCCGTACAAGTTATGTGCTAGTTTTCAGATTTGCCTTTTACTTATTGTTCTGATAAAAGAGTTATCATTGCAAATATTATGATGGTTTGTTGATAAAAATGAATTGATCATTGAGAAAGGTATAAGATTTGTATGAAACTGTATCATAATGTGATAATCAAGTGAATGGTTTATTCATTCTAGAAGTTAAAACCGCTAATTACGTTAAGAAAAGAAAATGTGACAATTTTTAAATAATAACGTTCAAGCAAATGTGACTCAAGATTTATTGTATGGATGCCTGCAGTTCATGGTTCAGTTTAGTTGGATTATTTTGAGGAAGTTTGTTCTATCTATTTTGGTTTTAAAGATTCCACCTTTAGTTTGTTTTCAAATTTGTTTTTTAGAGTGTACGGGTTGATTCGAGATTGTTTTGATCTAATTTGTTTTAATCAATGGGTATGAGGTTGAGGTAGTTCTATATCATACGTTAACGGAGAAAGTGCTTGGCAGCCTCCTCGAATAATTTCAATACTTACGCTCAATATTGTTTATTTGTACAACTTTTATACATGATATGCATTTATGGAAACAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCACCAATTGACGTGGTTGTTCCTCCAGGAAACACTGGACTCGATCCTTCCCAGACATCTTTCTTTCAGGTTTCTTATAAAACTAATTTCCTCCATTTTTAAACTATTCAACTTGGAAAACGATATTAACTTGGAAGTCGAATTGATCTTAGGTGCTGAACATCCCAACAAAGATTAACAAAGGAACAGTCGAAATCATCACTCCTGTGGGGCTAATCAAGAAAGGAGACAAAGTTGGCTCATCCGAGGCTGCACTTCTCTCTAAGCTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTCCTCTCTGTCTATGAAAATGGTTCTGTTTTCGATCCAGAGGTGCTTGATCTTACAGAAGAAGATCTTCTCGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTATCTCTCTTGCTGTGTCTTTCCCAACTCTTGCCGGTGCTCCCCACATGCTCATCAACGCCTATAAGAATGCTCTTGCTGTTGCTGTTGCTACTGAATATTCGTTCCCTCAGGCCGATGAAATCAAAGAATTCTTGAAGGTTCGTTTAAACACCTTTACATATCGAAGGCTTAGATATAATTTTGGTGCCGGAAGTTTTGGTTTTCAACAACTTTCTATTTAGATCCAGTTTTGATTTGATAAAGTTTTGTTTTGATCTTTTTAATTACTTTCTAAATTAGACCTTTTAACAGCTAAAACCTCAACTTTACCCTTCAAATTTGTTAAGTTTTACATTCATTAGTCCCTACGATAGAAGTAATGATCTGAACAAATCTGAAAATTTAACCCCCTCTCTATATATATAGATTACAACAAATGGGGTAGAAGTTCCTACTAACTTTTTAATATGGCATATTTTTATGGACATTTTAGTGGATCCACTTATCTTAGACATTCATTTTAGTAGGATCCATCTATCTGTTAAATTCAGTAGTAAAAATTATTTATGAACTTGAAAGGAGTTACATTTTAAAATGGTATGATGGGACTTATTTGGTATGATGAAAATTTTGTAGGATCCAAGCAAGTTTGCAGCTGCAGCAGCTCCTTCTGCGGTGGCCGAGTCTGGAGGCGCTACCTCAGCCGCTGCTGCCCCTGCCGCGAAGGAAGAAAAGAAGGAAGAACCAGAGGAAGAGTCAGATGAGGATATGATCATG

mRNA sequence

ATGGTTCTCAAACCCACCAGAGCTCAAAAGAAGACTCACTACGACCAGAAACTCTGCCGCCTTCTCGAAGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGCTCTAACCAGCTTCAGAGCATTCGCAAGGGCCTTCGTGGCGATTCCATTGTCCTCATGGGCAAGAACACCATGATGAAACGTTCCATCAGAATCCATTCTGAGAAGACCGGTAACACCGCCACCATGAACCTCCTCCCTCATCTTGTGGGAAACGTCGGCTTGATCTTCACTAAAGGTGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCACCAATTGACGTGGTTGTTCCTCCAGGAAACACTGGACTCGATCCTTCCCAGACATCTTTCTTTCAGGTGCTGAACATCCCAACAAAGATTAACAAAGGAACAGTCGAAATCATCACTCCTGTGGGGCTAATCAAGAAAGGAGACAAAGTTGGCTCATCCGAGGCTGCACTTCTCTCTAAGCTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTCCTCTCTGTCTATGAAAATGGTTCTGTTTTCGATCCAGAGGTGCTTGATCTTACAGAAGAAGATCTTCTCGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTATCTCTCTTGCTGTGTCTTTCCCAACTCTTGCCGGTGCTCCCCACATGCTCATCAACGCCTATAAGAATGCTCTTGCTGTTGCTGTTGCTACTGAATATTCGTTCCCTCAGGCCGATGAAATCAAAGAATTCTTGAAGGATCCAAGCAAGTTTGCAGCTGCAGCAGCTCCTTCTGCGGTGGCCGAGTCTGGAGGCGCTACCTCAGCCGCTGCTGCCCCTGCCGCGAAGGAAGAAAAGAAGGAAGAACCAGAGGAAGAGTCAGATGAGGATATGATCATG

Coding sequence (CDS)

ATGGTTCTCAAACCCACCAGAGCTCAAAAGAAGACTCACTACGACCAGAAACTCTGCCGCCTTCTCGAAGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGCTCTAACCAGCTTCAGAGCATTCGCAAGGGCCTTCGTGGCGATTCCATTGTCCTCATGGGCAAGAACACCATGATGAAACGTTCCATCAGAATCCATTCTGAGAAGACCGGTAACACCGCCACCATGAACCTCCTCCCTCATCTTGTGGGAAACGTCGGCTTGATCTTCACTAAAGGTGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCACCAATTGACGTGGTTGTTCCTCCAGGAAACACTGGACTCGATCCTTCCCAGACATCTTTCTTTCAGGTGCTGAACATCCCAACAAAGATTAACAAAGGAACAGTCGAAATCATCACTCCTGTGGGGCTAATCAAGAAAGGAGACAAAGTTGGCTCATCCGAGGCTGCACTTCTCTCTAAGCTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTCCTCTCTGTCTATGAAAATGGTTCTGTTTTCGATCCAGAGGTGCTTGATCTTACAGAAGAAGATCTTCTCGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTATCTCTCTTGCTGTGTCTTTCCCAACTCTTGCCGGTGCTCCCCACATGCTCATCAACGCCTATAAGAATGCTCTTGCTGTTGCTGTTGCTACTGAATATTCGTTCCCTCAGGCCGATGAAATCAAAGAATTCTTGAAGGATCCAAGCAAGTTTGCAGCTGCAGCAGCTCCTTCTGCGGTGGCCGAGTCTGGAGGCGCTACCTCAGCCGCTGCTGCCCCTGCCGCGAAGGAAGAAAAGAAGGAAGAACCAGAGGAAGAGTCAGATGAGGATATGATCATG

Protein sequence

MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTMMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKLGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGAPHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAPAAKEEKKEEPEEESDEDMIM

Homology

[Close]

BLAST of ClCG03G000820 vs. Swiss-Prot
Match: RLA0_SOYBN (60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 7.5e-140
Identity = 251/318 (78.93%), Postives = 280/318 (88.05%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M  K T+A+KK  YD KLC L+EEY Q+L+V +DNVGSNQLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+R+H+EKTGN A +NL+P LVGNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LI+KGDKVGSSEAALL+K
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+VLSVY+NGSVF PEVLDLTE+DL+ KF AGVSMV S+SLA+S+PTLA A
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM +NAYKN LAVAV T+YSFP+AD++KE+LKDPSKFA AA  +  A SG    A AA 
Sbjct: 241 PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASG----APAAA 300

Query: 301 AAKEEKKEEPEEESDEDM 319
           A +EEKKEEP EESD+DM
Sbjct: 301 AKEEEKKEEPAEESDDDM 314

[Close]

BLAST of ClCG03G000820 vs. Swiss-Prot
Match: RLA03_ARATH (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C PE=1 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 1.9e-135
Identity = 243/315 (77.14%), Postives = 279/315 (88.57%), Query Frame = 1


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE +GNTA +NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKL 181
           IDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGAP 241
           GIRPFSYGL+V SVY+NGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLA AP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAPA 301
           HM INAYKNALA+AVAT+Y+FPQA+++KEFLKDPSKF  AAA +  A++GG ++ A A A
Sbjct: 241 HMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAA-AVSADAGGGSAQAGAAA 300

Query: 302 AKEEKKEEPEEESDE 317
             EEKKEE +EE  E
Sbjct: 301 KVEEKKEESDEEDYE 314

[Close]

BLAST of ClCG03G000820 vs. Swiss-Prot
Match: RLA02_ARATH (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B PE=1 SV=2)

HSP 1 Score: 479.9 bits (1234), Expect = 2.1e-134
Identity = 241/312 (77.24%), Postives = 276/312 (88.46%), Query Frame = 1


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE TGNTA +NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKL 181
           IDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGAP 241
           GIRPFSYGL+V SVY+NGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLA AP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAPA 301
           HM INAYKNALA+AVATEY+FPQA+++KE+LKDPSKFA A+  +  A++GG   A    A
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPA----A 300

Query: 302 AKEEKKEEPEEE 314
           AK E+KEE +EE
Sbjct: 301 AKVEEKEESDEE 308

[Close]

BLAST of ClCG03G000820 vs. Swiss-Prot
Match: RLA01_ARATH (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A PE=1 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.0e-133
Identity = 243/318 (76.42%), Postives = 273/318 (85.85%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +K T+A+KK  YD KLC+LL EYSQ+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+RIH++KTGN A ++LLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALL+K
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+V SVY+NGSVF+PEVL+LTE+DL+EKF AGVSM+ ++SLA+S+PT+A A
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM +NAYKN LAVA+ATEYSFPQA+ +KEFLKDP+KFA A A     ESGGA  A A  
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAV- 300

Query: 301 AAKEEKKEEPEEESDEDM 319
                 +EE  EESD DM
Sbjct: 301 ------EEEAAEESDGDM 311

[Close]

BLAST of ClCG03G000820 vs. Swiss-Prot
Match: RLA0_ORYSJ (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica GN=Os08g0130500 PE=1 SV=3)

HSP 1 Score: 477.2 bits (1227), Expect = 1.4e-133
Identity = 240/320 (75.00%), Postives = 280/320 (87.50%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +K T+A+KK  YD+KLC+LL+EY++VLI  ADNVGSNQLQ IRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           +++R I++H++ TGN   + L+P LVGNVGLIFTKGDLKEV+EEVAKYKVGAPARVGLVA
Sbjct: 61  LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           P+DVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSE+ALL+K
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL++ +VY++GSVF PEVLDLTE+DL+EKF +GVSMVAS+SLA+S+PT+A A
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM +N YKN LAVAV TEYS+P AD+IKE+LKDPSKFA AA     A+SG   +AA + 
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAA--PVAADSG---AAAPSA 300

Query: 301 AAKEEKKEEPEEESDEDMIM 321
           A +EEKKEEPEEESD D+ M
Sbjct: 301 AKEEEKKEEPEEESDGDLGM 315

[Close]

BLAST of ClCG03G000820 vs. TrEMBL
Match: A0A061FL90_THECC (60S acidic ribosomal protein P0 OS=Theobroma cacao GN=TCM_042569 PE=3 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.6e-141
Identity = 260/318 (81.76%), Postives = 288/318 (90.57%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +KP++A KK  YD KLC+LL+EY+Q+LI  ADNVGSNQLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPSKADKKIAYDAKLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIR+H+EKTGNTA +NL+P L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALL+K
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+VLSVY+NGSVF PEVLDLTE+DL+EKF AGVSMV ++SLA+S+PTLA A
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVEKFAAGVSMVTALSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM INAYKN LA+A+ATEYSFPQAD++KE+L DPSKFA AAAP  VA   GA  A AAP
Sbjct: 241 PHMFINAYKNVLALAIATEYSFPQADKVKEYLADPSKFAVAAAP--VAADAGA--APAAP 300

Query: 301 AAKEEKKEEPEEESDEDM 319
           AA EEKK EPEEESD+DM
Sbjct: 301 AAVEEKKPEPEEESDDDM 314

[Close]

BLAST of ClCG03G000820 vs. TrEMBL
Match: A0A0D2V3D2_GOSRA (60S acidic ribosomal protein P0 OS=Gossypium raimondii GN=B456_012G076000 PE=3 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 6.1e-141
Identity = 259/318 (81.45%), Postives = 285/318 (89.62%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +KP++A KK  YD KLC+LL+EY+Q+LI  ADNVGSNQLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPSKADKKIAYDAKLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+R+H+EKTGN A +NL+P L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHAEKTGNQAFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALL+K
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGLIVLSVY+NGSVF PEVLDLTE+DL+EKF  GVSMV ++SLA+S+PTLA A
Sbjct: 181 LGIRPFSYGLIVLSVYDNGSVFSPEVLDLTEDDLIEKFATGVSMVTALSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM IN YKN LAVAVATEYSFPQAD++KE+L DPSKFA AAAP  VA  GGA  AAAAP
Sbjct: 241 PHMFINGYKNVLAVAVATEYSFPQADKVKEYLADPSKFAVAAAP--VAAGGGAAPAAAAP 300

Query: 301 AAKEEKKEEPEEESDEDM 319
              EEKK EPEEESD+DM
Sbjct: 301 V--EEKKPEPEEESDDDM 314

[Close]

BLAST of ClCG03G000820 vs. TrEMBL
Match: A0A0B0PKP6_GOSAR (60S acidic ribosomal protein P0 OS=Gossypium arboreum GN=F383_09321 PE=3 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 6.1e-141
Identity = 257/318 (80.82%), Postives = 288/318 (90.57%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +KP++A+KK  YD KLC+LL+EY+Q+LI  ADNVGSNQLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPSKAEKKIAYDAKLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+R+H+EKTGN A +NL+P L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHAEKTGNQAFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALL+K
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+VLSVY+NGSVF PEVLDLTE+DL+EKF +GVSMV ++SLA+S+PTLA A
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFASGVSMVTALSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM IN YKN LAVAVATEYSFPQAD++KE+L DPSKFA AAAP  VA  GG  + AAAP
Sbjct: 241 PHMFINGYKNVLAVAVATEYSFPQADKVKEYLADPSKFAVAAAP--VAGGGGGAAPAAAP 300

Query: 301 AAKEEKKEEPEEESDEDM 319
            A+EEKK EPEEESD+DM
Sbjct: 301 -AEEEKKPEPEEESDDDM 315

[Close]

BLAST of ClCG03G000820 vs. TrEMBL
Match: A0A068V0G2_COFCA (60S acidic ribosomal protein P0 OS=Coffea canephora GN=GSCOC_T00039228001 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 2.3e-140
Identity = 256/318 (80.50%), Postives = 286/318 (89.94%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MV K ++A KK  YDQKLC+LL+EYSQVLI  ADNVGSNQLQ+IRKGLRGDSIVLMGKNT
Sbjct: 1   MVTKVSKADKKIAYDQKLCQLLDEYSQVLIAVADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKR+IR+H+EKTGN A +NL+P LVGNVGLIFTKGDLKE+ EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRTIRVHAEKTGNQAILNLIPLLVGNVGLIFTKGDLKEISEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           P+DVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LI+KGDKVGSSEAALL+K
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+VLSVY+NGSVF PEVLDLTE+DL+EKF  GVSMV S+SLA+S+PTLA A
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM IN YKN LA+AV T+YSFPQAD++KE+L+DPSKFA AAAP A A+SG    AA A 
Sbjct: 241 PHMFINGYKNVLAIAVETDYSFPQADKVKEYLEDPSKFAVAAAPVAAADSG----AAPAA 300

Query: 301 AAKEEKKEEPEEESDEDM 319
           A +EEKKEEP EESD+DM
Sbjct: 301 AKEEEKKEEPAEESDDDM 314

[Close]

BLAST of ClCG03G000820 vs. TrEMBL
Match: G7JC94_MEDTR (60S acidic ribosomal protein P0 OS=Medicago truncatula GN=MTR_3g108280 PE=3 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 3.0e-140
Identity = 253/318 (79.56%), Postives = 287/318 (90.25%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +KPT+A+KK +YD KLC+L++EY+Q+L+V ADNVGS QLQ+IR+GLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKQNYDAKLCQLIDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+R+H+EKTGN A +NL+P LVGNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHAEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALL+K
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+VLSVY+NGSVF PEVLDLTE+DL+ KF  GVSMV S+SLA+S+PTLA A
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM +NAYKN LA AVATEYSFP+AD++KE+LKDPSKFA A A  A A SGGA +AA   
Sbjct: 241 PHMFVNAYKNVLAFAVATEYSFPEADKVKEYLKDPSKFAVAVAAPAAAASGGAPAAA--- 300

Query: 301 AAKEEKKEEPEEESDEDM 319
           A +E KKEEPEEESDED+
Sbjct: 301 AKEEAKKEEPEEESDEDI 315

[Close]

BLAST of ClCG03G000820 vs. TAIR10
Match: AT3G11250.1 (AT3G11250.1 Ribosomal protein L10 family protein)

HSP 1 Score: 483.4 bits (1243), Expect = 1.1e-136
Identity = 243/315 (77.14%), Postives = 279/315 (88.57%), Query Frame = 1


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE +GNTA +NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKL 181
           IDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGAP 241
           GIRPFSYGL+V SVY+NGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLA AP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAPA 301
           HM INAYKNALA+AVAT+Y+FPQA+++KEFLKDPSKF  AAA +  A++GG ++ A A A
Sbjct: 241 HMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAA-AVSADAGGGSAQAGAAA 300

Query: 302 AKEEKKEEPEEESDE 317
             EEKKEE +EE  E
Sbjct: 301 KVEEKKEESDEEDYE 314

[Close]

BLAST of ClCG03G000820 vs. TAIR10
Match: AT3G09200.1 (AT3G09200.1 Ribosomal protein L10 family protein)

HSP 1 Score: 479.9 bits (1234), Expect = 1.2e-135
Identity = 241/312 (77.24%), Postives = 276/312 (88.46%), Query Frame = 1


Query: 2   VLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTM 61
           ++K T+A+KK  YD KLC+L++EY+Q+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSE TGNTA +NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKL 181
           IDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGAP 241
           GIRPFSYGL+V SVY+NGSVF PEVLDLTE+ L+EKF +G+SMV S++LAVS+PTLA AP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAPA 301
           HM INAYKNALA+AVATEY+FPQA+++KE+LKDPSKFA A+  +  A++GG   A    A
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPA----A 300

Query: 302 AKEEKKEEPEEE 314
           AK E+KEE +EE
Sbjct: 301 AKVEEKEESDEE 308

[Close]

BLAST of ClCG03G000820 vs. TAIR10
Match: AT2G40010.1 (AT2G40010.1 Ribosomal protein L10 family protein)

HSP 1 Score: 477.6 bits (1228), Expect = 5.9e-135
Identity = 243/318 (76.42%), Postives = 273/318 (85.85%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +K T+A+KK  YD KLC+LL EYSQ+L+V ADNVGS QLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+RIH++KTGN A ++LLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALL+K
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+V SVY+NGSVF+PEVL+LTE+DL+EKF AGVSM+ ++SLA+S+PT+A A
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM +NAYKN LAVA+ATEYSFPQA+ +KEFLKDP+KFA A A     ESGGA  A A  
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAV- 300

Query: 301 AAKEEKKEEPEEESDEDM 319
                 +EE  EESD DM
Sbjct: 301 ------EEEAAEESDGDM 311

[Close]

BLAST of ClCG03G000820 vs. TAIR10
Match: AT1G25260.1 (AT1G25260.1 Ribosomal protein L10 family protein)

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-08
Identity = 46/205 (22.44%), Postives = 91/205 (44.39%), Query Frame = 1


Query: 22  LEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNTMMKRSIRIHSEKTGNTATMNL 81
           +E+YS V +   +N+ + + +  R+  R +    +G N +M+ ++   +E    +    +
Sbjct: 34  VEKYSSVYVFSFENMRNIKFKEFRQQFRHNGKFFLGSNKVMQVALGRSAEDELRSGIYKV 93

Query: 82  LPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPIDVVVPPGNTG-LDPSQTSF 141
              L G+ GL+ T    +EV+     Y+    +R G +A   V +  G            
Sbjct: 94  SKLLRGDTGLLVTDMPKEEVESLFNAYEDSDFSRTGSIAVETVELKEGPLEQFTHEMEPL 153

Query: 142 FQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSKLGIRPFSYGLIVLSVYENGS 201
            + L +P ++NKGTVE++    + ++G ++    A +L  L ++  ++ L +L  +    
Sbjct: 154 LRKLEMPVRLNKGTVELVADFVVCEEGKQLSPKSAHILRLLRMKMATFKLNLLCRW---- 213

Query: 202 VFDPEVLDLTEEDLLEKFLAGVSMV 226
              P   +L  EDL E +   +S V
Sbjct: 214 --SPSDFELYREDLSELYREDLSDV 232

[Close]

BLAST of ClCG03G000820 vs. NCBI nr
Match: gi|659115087|ref|XP_008457380.1| (PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis melo])

HSP 1 Score: 558.9 bits (1439), Expect = 5.7e-156
Identity = 292/321 (90.97%), Postives = 304/321 (94.70%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT+YDQKLCRLL+EYSQVLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSEKTGNTA  NLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGLIV+SVY+NGSVF P VLDLTEEDLLEKFLAGVSMVAS+SLAVSFPTLA A
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKNALA+AVATEYSF +ADEIKEFLKDPSKFAAAAAP+A A+     S  AAP
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAAAAK-----SVVAAP 300

Query: 301 AAKEEKKEEPEEESD-EDMIM 321
           AA E+KKEEPEEESD EDMIM
Sbjct: 301 AAMEDKKEEPEEESDEEDMIM 316

[Close]

BLAST of ClCG03G000820 vs. NCBI nr
Match: gi|449455034|ref|XP_004145258.1| (PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis sativus])

HSP 1 Score: 557.8 bits (1436), Expect = 1.3e-155
Identity = 292/321 (90.97%), Postives = 303/321 (94.39%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           MVLKPTRAQKKT+YDQKLCRLL+EYSQVLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSE TGNTA  NLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGLIV+SVY+NGSVF P VLDL+EEDLLEKFLAGVSMVAS+SLAVSFPTLA A
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLSEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHMLINAYKNALA+AVATEYSF +ADEIKEFLKDPSKFAAAAAP+  AE     S AAAP
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAVAAE-----SVAAAP 300

Query: 301 AAKEEKKEEPEEESDE-DMIM 321
           AA EEKKEEPEEESDE DMIM
Sbjct: 301 AAVEEKKEEPEEESDEGDMIM 316

[Close]

BLAST of ClCG03G000820 vs. NCBI nr
Match: gi|225448367|ref|XP_002268645.1| (PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera])

HSP 1 Score: 518.1 bits (1333), Expect = 1.1e-143
Identity = 260/318 (81.76%), Postives = 290/318 (91.19%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +KP++A KK  YDQKLC+LL+EYSQ+LI  ADNVGSNQLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPSKADKKIAYDQKLCQLLDEYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIR+H+EKTGNTA +NL+P LVGNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRLHAEKTGNTAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LIKKGDKVGSSEAALL+K
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+VLSVY+NGSVF PEVLDLTEEDL+EKF AGVSMV S+SLA+S+PTLA A
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM INAYKN LAVAVATEYSFPQAD++KE+LKDPSKFA A AP   +++G    AA A 
Sbjct: 241 PHMFINAYKNVLAVAVATEYSFPQADKVKEYLKDPSKFAVATAPVTASDAG----AAPAA 300

Query: 301 AAKEEKKEEPEEESDEDM 319
           + +EEKKEEP+EESD+DM
Sbjct: 301 SKEEEKKEEPQEESDDDM 314

[Close]

BLAST of ClCG03G000820 vs. NCBI nr
Match: gi|147843260|emb|CAN80537.1| (hypothetical protein VITISV_003812 [Vitis vinifera])

HSP 1 Score: 517.3 bits (1331), Expect = 1.9e-143
Identity = 258/318 (81.13%), Postives = 290/318 (91.19%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +KP++A KK  YDQKLC+LL+EY+Q+LI  ADNVGSNQLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPSKADKKIAYDQKLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIR+H+EKTGN A +NL+P LVGNVGLIFT+GDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRLHAEKTGNQAFLNLIPLLVGNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LI+KGDKVGSSEAALL+K
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+VLSVY+NGSVF PEVLDLTEEDL+EKF AGVSMV S+SLA+S+PTLA A
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLMEKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM +NAYKN L+VAVATEYSFPQAD++KEFLKDPSKFA A AP A A++GG    +AAP
Sbjct: 241 PHMFVNAYKNVLSVAVATEYSFPQADKVKEFLKDPSKFAVAVAPVAAADAGG----SAAP 300

Query: 301 AAKEEKKEEPEEESDEDM 319
             +EEKKEEP EESD+DM
Sbjct: 301 PKEEEKKEEPAEESDDDM 314

[Close]

BLAST of ClCG03G000820 vs. NCBI nr
Match: gi|225449110|ref|XP_002276842.1| (PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera])

HSP 1 Score: 516.2 bits (1328), Expect = 4.2e-143
Identity = 257/318 (80.82%), Postives = 290/318 (91.19%), Query Frame = 1


Query: 1   MVLKPTRAQKKTHYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60
           M +KP++A KK  YDQKLC+LL+EY+Q+LI  ADNVGSNQLQ+IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPSKADKKIAYDQKLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSEKTGNTATMNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIR+H+EKTGN A +NL+P LVGNVGLIFT+GDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRLHAEKTGNQAFLNLIPLLVGNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVGLIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV LI+KGDKVGSSEAALL+K
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVLSVYENGSVFDPEVLDLTEEDLLEKFLAGVSMVASISLAVSFPTLAGA 240
           LGIRPFSYGL+VLSVY+NGSVF PEVLDLTEEDL+EKF AGVSMV S+SLA+S+PTLA A
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLMEKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAVAVATEYSFPQADEIKEFLKDPSKFAAAAAPSAVAESGGATSAAAAP 300
           PHM +NAYKN L+VAVAT+YSFPQAD++KEFLKDPSKFA A AP A A++GG    +AAP
Sbjct: 241 PHMFVNAYKNVLSVAVATDYSFPQADKVKEFLKDPSKFAVAVAPVAAADAGG----SAAP 300

Query: 301 AAKEEKKEEPEEESDEDM 319
             +EEKKEEP EESD+DM
Sbjct: 301 PKEEEKKEEPAEESDDDM 314

The following BLAST results are available for this feature:

BLAST of ClCG03G000820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLA0_SOYBN	7.5e-140	78.93	60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1	[more]
RLA03_ARATH	1.9e-135	77.14	60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C PE=1 SV=1	[more]
RLA02_ARATH	2.1e-134	77.24	60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B PE=1 SV=2	[more]
RLA01_ARATH	1.0e-133	76.42	60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A PE=1 SV=1	[more]
RLA0_ORYSJ	1.4e-133	75.00	60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica GN=Os08g0130500 ...	[more]

BLAST of ClCG03G000820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061FL90_THECC	1.6e-141	81.76	60S acidic ribosomal protein P0 OS=Theobroma cacao GN=TCM_042569 PE=3 SV=1	[more]
A0A0D2V3D2_GOSRA	6.1e-141	81.45	60S acidic ribosomal protein P0 OS=Gossypium raimondii GN=B456_012G076000 PE=3 S...	[more]
A0A0B0PKP6_GOSAR	6.1e-141	80.82	60S acidic ribosomal protein P0 OS=Gossypium arboreum GN=F383_09321 PE=3 SV=1	[more]
A0A068V0G2_COFCA	2.3e-140	80.50	60S acidic ribosomal protein P0 OS=Coffea canephora GN=GSCOC_T00039228001 PE=3 S...	[more]
G7JC94_MEDTR	3.0e-140	79.56	60S acidic ribosomal protein P0 OS=Medicago truncatula GN=MTR_3g108280 PE=3 SV=1	[more]

BLAST of ClCG03G000820 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11250.1	1.1e-136	77.14	Ribosomal protein L10 family protein	[more]
AT3G09200.1	1.2e-135	77.24	Ribosomal protein L10 family protein	[more]
AT2G40010.1	5.9e-135	76.42	Ribosomal protein L10 family protein	[more]
AT1G25260.1	4.2e-08	22.44	Ribosomal protein L10 family protein	[more]

BLAST of ClCG03G000820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115087\|ref\|XP_008457380.1\|	5.7e-156	90.97	PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis melo]	[more]
gi\|449455034\|ref\|XP_004145258.1\|	1.3e-155	90.97	PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis sativus]	[more]
gi\|225448367\|ref\|XP_002268645.1\|	1.1e-143	81.76	PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]	[more]
gi\|147843260\|emb\|CAN80537.1\|	1.9e-143	81.13	hypothetical protein VITISV_003812 [Vitis vinifera]	[more]
gi\|225449110\|ref\|XP_002276842.1\|	4.2e-143	80.82	PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001790	Ribosomal_L10P

Vocabulary: **Biological Process**
Term	Definition
GO:0042254	ribosome biogenesis

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006284	base-excision repair
biological_process	GO:0002181	cytoplasmic translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003906	DNA-(apurinic or apyrimidinic site) lyase activity
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G000820.1	ClCG03G000820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 8..108 score: 7.5
None	No IPR available	PANTHER	PTHR21141	60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	coord: 9..209 score: 1.0E-144coord: 269..320 score: 1.0E
None	No IPR available	PANTHER	PTHR21141:SF3	60S ACIDIC RIBOSOMAL PROTEIN P0	coord: 9..209 score: 1.0E-144coord: 269..320 score: 1.0E
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 235..319 score: 2.4
None	No IPR available	unknown	SSF160369	Ribosomal protein L10-like	coord: 9..134 score: 1.96

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG03G000820	Csa1G530120	Cucumber (Chinese Long) v2	cuwcgB047
ClCG03G000820	MELO3C020556	Melon (DHL92) v3.5.1	mewcgB149
ClCG03G000820	Cla008171	Watermelon (97103) v1	wcgwmB223
ClCG03G000820	Cla97C03G051630	Watermelon (97103) v2	wcgwmbB186
ClCG03G000820	Bhi08G000429	Wax gourd	wcgwgoB340
ClCG03G000820	CSPI01G23810	Wild cucumber (PI 183967)	cpiwcgB050
ClCG03G000820	Cucsa.147000	Cucumber (Gy14) v1	cgywcgB246
ClCG03G000820	CmaCh13G000730	Cucurbita maxima (Rimu)	cmawcgB194
ClCG03G000820	CmaCh04G011250	Cucurbita maxima (Rimu)	cmawcgB646
ClCG03G000820	CmoCh13G000620	Cucurbita moschata (Rifu)	cmowcgB184
ClCG03G000820	CmoCh04G001620	Cucurbita moschata (Rifu)	cmowcgB649
ClCG03G000820	CmoCh04G011920	Cucurbita moschata (Rifu)	cmowcgB648
ClCG03G000820	Lsi02G012900	Bottle gourd (USVL1VR-Ls)	lsiwcgB185
ClCG03G000820	Cp4.1LG01g11130	Cucurbita pepo (Zucchini)	cpewcgB380
ClCG03G000820	Cp4.1LG20g08010	Cucurbita pepo (Zucchini)	cpewcgB467
ClCG03G000820	CsGy1G023290	Cucumber (Gy14) v2	cgybwcgB044
ClCG03G000820	MELO3C020556.2	Melon (DHL92) v3.6.1	medwcgB141
ClCG03G000820	Carg00229	Silver-seed gourd	carwcgB0648
ClCG03G000820	Carg20607	Silver-seed gourd	carwcgB0375
ClCG03G000820	CsaV3_1G036120	Cucumber (Chinese Long) v3	cucwcgB051

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG03G000820	Watermelon (Charleston Gray)	wcgwcgB049
ClCG03G000820	Watermelon (Charleston Gray)	wcgwcgB140
ClCG03G000820	Cucumber (Gy14) v1	cgywcgB315
ClCG03G000820	Cucurbita maxima (Rimu)	cmawcgB229
ClCG03G000820	Cucurbita maxima (Rimu)	cmawcgB404
ClCG03G000820	Cucurbita maxima (Rimu)	cmawcgB735
ClCG03G000820	Cucurbita moschata (Rifu)	cmowcgB212
ClCG03G000820	Cucurbita moschata (Rifu)	cmowcgB403
ClCG03G000820	Cucurbita moschata (Rifu)	cmowcgB741
ClCG03G000820	Wild cucumber (PI 183967)	cpiwcgB220
ClCG03G000820	Cucumber (Chinese Long) v2	cuwcgB216
ClCG03G000820	Melon (DHL92) v3.5.1	mewcgB328
ClCG03G000820	Watermelon (97103) v1	wcgwmB221
ClCG03G000820	Cucurbita pepo (Zucchini)	cpewcgB503
ClCG03G000820	Melon (DHL92) v3.6.1	medwcgB322
ClCG03G000820	Silver-seed gourd	carwcgB0154
ClCG03G000820	Silver-seed gourd	carwcgB0436
ClCG03G000820	Silver-seed gourd	carwcgB0974
ClCG03G000820	Watermelon (97103) v2	wcgwmbB176
ClCG03G000820	Watermelon (97103) v2	wcgwmbB187
ClCG03G000820	Wax gourd	wcgwgoB337